BLASTX nr result

ID: Akebia24_contig00026433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00026433
         (749 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]...    83   1e-13
gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]      79   1e-12
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    66   1e-08
ref|YP_588321.1| hypothetical protein ZeamMp058 [Zea mays subsp....    65   3e-08
ref|XP_002535311.1| conserved hypothetical protein [Ricinus comm...    45   3e-08
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    58   3e-06

>gb|AGC78894.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803272|gb|AGC79007.1| hypothetical protein
           (mitochondrion) [Vicia faba]
          Length = 602

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 40/45 (88%), Positives = 40/45 (88%)
 Frame = +3

Query: 606 MGQRIKRFDFVPRDPPQVGFESRVMGYYPARFGEHL*SALVNGSP 740
           MGQRIKRFDFV RD PQVGFESRVMG YPARFGEH  SALVNGSP
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGEHFLSALVNGSP 45


>gb|EXB29791.1| hypothetical protein L484_008955 [Morus notabilis]
          Length = 69

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -1

Query: 740 GASIHQRRLQVLSEPCWIVTHHTALKPNLWWIPGDKV 630
           GASIHQRRL+VLSEPCWIVTHHTALKPNLWWIP D +
Sbjct: 17  GASIHQRRLKVLSEPCWIVTHHTALKPNLWWIPADVI 53


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = +3

Query: 606 MGQRIKRFDFVPRDPPQVGFESRVMGYYPARFGE 707
           MGQRIKRFDFV RD PQVGFESRVMG YPARFGE
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE 34


>ref|YP_588321.1| hypothetical protein ZeamMp058 [Zea mays subsp. mays]
           gi|40795110|gb|AAR91154.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|413954039|gb|AFW86688.1|
           putative uncharacterized protein orf109-a [Zea mays]
           gi|413954253|gb|AFW86902.1| putative uncharacterized
           protein orf109-a [Zea mays] gi|414888179|tpg|DAA64193.1|
           TPA: putative uncharacterized protein orf109-a [Zea
           mays]
          Length = 109

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 43/110 (39%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = -2

Query: 352 MSITHRRLVRTEGQCPPNLSGPTCXXXXXXXXXXXXXXXXXRCNAPAAGRGSCHLKGNAP 173
           MSITH RLVRTEGQCPP  +                         P             P
Sbjct: 1   MSITHLRLVRTEGQCPPRRA--------HQRSNCYLIGRFAFVQGPRCWNRRLSFSSKRP 52

Query: 172 TPEGRPRSLGKTLRKNNV---XXXXXXXXXXXXXXXXXFHFEIWIESRSG 32
           TPEGRPRS+GKTLRK NV                      FEIWIESR G
Sbjct: 53  TPEGRPRSIGKTLRKKNVSPRPRPAGPPPFFARRPPSSLFFEIWIESRFG 102


>ref|XP_002535311.1| conserved hypothetical protein [Ricinus communis]
           gi|223523476|gb|EEF27072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 45.4 bits (106), Expect(2) = 3e-08
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -2

Query: 484 SLIFPNVQSCSGLRKEHRPSALNE 413
           S+ FPNV+SCSGLRKEHRPS LNE
Sbjct: 40  SVGFPNVKSCSGLRKEHRPSTLNE 63



 Score = 39.7 bits (91), Expect(2) = 3e-08
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 545 KPLTFGSDKSSPFGRFAQ 492
           KPL+FGSDKSSPFGRFAQ
Sbjct: 16  KPLSFGSDKSSPFGRFAQ 33


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = -1

Query: 740 GASIHQRRLQVLSEPCWIVTHHTALKPNLW-WIPGDKVKALDPLPHTLRCSSPPIK 576
           G SI Q RL+VL EPC I+T++T           GD VKALDPLPHTL+ SS PIK
Sbjct: 17  GPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLKGSSTPIK 72


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