BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00026365
         (1198 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   399   e-108
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              382   e-103
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   369   1e-99
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ...   369   1e-99
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   367   4e-99
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   361   3e-97
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   360   5e-97
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   349   2e-93
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   344   5e-92
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   340   7e-91
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   325   3e-86
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   323   7e-86
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...   322   3e-85
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   315   2e-83
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...   314   5e-83
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   305   3e-80
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...   302   2e-79
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...   301   5e-79
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   1e-77
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...   295   2e-77

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  399 bits (1024), Expect = e-108
 Identities = 211/394 (53%), Positives = 259/394 (65%), Gaps = 8/394 (2%)
 Frame = +2

Query: 41   VTKMAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGP 220
            VT     T G TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G 
Sbjct: 47   VTAPVTATSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGS 106

Query: 221  LEDRTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQV 400
            +++ T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ +   V
Sbjct: 107  IDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLV 166

Query: 401  KKCALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVK---GLPRQVPNYNSKNLKQ 571
            +K   QLELI KGD+VGAK                    V     +     +  S +LKQ
Sbjct: 167  QKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 226

Query: 572  HSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIK 748
              WTSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+
Sbjct: 227  QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 286

Query: 749  GSKLNKLSMGKAKRNSTGKEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KG 916
            GSKL +     A+  S+ + EN ND    GD VD+ +  SS    DG  D+  K    KG
Sbjct: 287  GSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKG 346

Query: 917  GYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSM 1096
                 EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL  SG K  YSM
Sbjct: 347  AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 406

Query: 1097 FFIEALLVPPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            FF+E +LVPPIK RPPSKG  SVMEHPQTVLL K
Sbjct: 407  FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGK 440


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  382 bits (981), Expect = e-103
 Identities = 203/390 (52%), Positives = 250/390 (64%), Gaps = 7/390 (1%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            MA+  EG TE VEAV FSF T+EEVR  SFKKIT+P++LD++ RP P GLYDPA+G +++
Sbjct: 1    MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
             T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ +   V+K 
Sbjct: 61   NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVK---GLPRQVPNYNSKNLKQHSW 580
              QLELI KGD+VGAK                    V     +     +  S +LKQ  W
Sbjct: 121  VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 180

Query: 581  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 757
            TSLQ  EAMS++D  +  +  +CK C AK+P++T P FGWFH+  + +  TRAN+I+GSK
Sbjct: 181  TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 240

Query: 758  LNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV---KGGYLY 928
            L +                      +  VD+ +  SS    DG  D+  K    KG    
Sbjct: 241  LER---------------------PLNGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAP 279

Query: 929  PEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1108
             EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL  SG K  YSMFF+E
Sbjct: 280  IEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLE 339

Query: 1109 ALLVPPIKLRPPSKGGDSVMEHPQTVLLNK 1198
             +LVPPIK RPPSKG  SVMEHPQTVLL K
Sbjct: 340  TILVPPIKFRPPSKGQISVMEHPQTVLLGK 369


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  369 bits (947), Expect = 1e-99
 Identities = 200/386 (51%), Positives = 246/386 (63%), Gaps = 3/386 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            MA  TEGAT+SVEAV F+F+T EEVR  SF K+TN  LLD + RP P GLYD  +GPLED
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
            RT CKSCG     CPGHCGHIDLVSP+YNPLLF  L  LLQR CFFCYHFR  + +V++C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSL 589
              QL+LI  GDIVGAK                   +  G       +NS+ +K   WTSL
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 766
            Q  EAMS+L+  +  +  +CK C AKNP IT P FGW H+N M     R N+I+G K+  
Sbjct: 177  QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 940
                +A    +G E+  + SS+   VD  + ++S + + G+  +  K   K   +  EF+
Sbjct: 237  TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293

Query: 941  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1120
            KQK  FSGPLLPSEVK   KLLWENE +LCS+I DIQQ+     G K  YSMFF+E +LV
Sbjct: 294  KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350

Query: 1121 PPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            PPIK R P+KGGDSVMEHPQTVLL+K
Sbjct: 351  PPIKFRAPTKGGDSVMEHPQTVLLSK 376


>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
            gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
            putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  369 bits (947), Expect = 1e-99
 Identities = 200/386 (51%), Positives = 246/386 (63%), Gaps = 3/386 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            MA  TEGAT+SVEAV F+F+T EEVR  SF K+TN  LLD + RP P GLYD  +GPLED
Sbjct: 1    MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
            RT CKSCG     CPGHCGHIDLVSP+YNPLLF  L  LLQR CFFCYHFR  + +V++C
Sbjct: 61   RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSL 589
              QL+LI  GDIVGAK                   +  G       +NS+ +K   WTSL
Sbjct: 121  VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 766
            Q  EAMS+L+  +  +  +CK C AKNP IT P FGW H+N M     R N+I+G K+  
Sbjct: 177  QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 940
                +A    +G E+  + SS+   VD  + ++S + + G+  +  K   K   +  EF+
Sbjct: 237  TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293

Query: 941  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1120
            KQK  FSGPLLPSEVK   KLLWENE +LCS+I DIQQ+     G K  YSMFF+E +LV
Sbjct: 294  KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350

Query: 1121 PPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            PPIK R P+KGGDSVMEHPQTVLL+K
Sbjct: 351  PPIKFRAPTKGGDSVMEHPQTVLLSK 376


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  367 bits (943), Expect = 4e-99
 Identities = 199/390 (51%), Positives = 252/390 (64%), Gaps = 7/390 (1%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            M  TTE  TESV+AV FSFLT+EEVR  SF K+  P+LLD +GRP P GLYDP +GPL++
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
             + CK+CGQR F CPGH GHIDLV PVYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVP--NY-NSKNLKQHSW 580
              +LELIIKGDI+ AK                            P  NY N +NLK   W
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180

Query: 581  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 757
            TSLQ++EA   L + +  + T+C  C AKNP+I+ P FGW H+N MP+   RAN+I+G  
Sbjct: 181  TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240

Query: 758  LNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 931
            L +   G       G+EE   D  A  DVD+ +  S    + GT D+A +   KG    P
Sbjct: 241  LGETFSG-------GEEE--KDLGASSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVP 291

Query: 932  E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1108
              F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+     G K  +S+FF+ 
Sbjct: 292  SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348

Query: 1109 ALLVPPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            A+LVPPIK R PSKGGDSVMEHPQTVLL+K
Sbjct: 349  AVLVPPIKFRLPSKGGDSVMEHPQTVLLSK 378


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  361 bits (927), Expect = 3e-97
 Identities = 196/390 (50%), Positives = 249/390 (63%), Gaps = 7/390 (1%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            M  TTE  TESV+AV FSFLT+EEVR  SF K+T P+LLD + RP P GLYDP +GPL++
Sbjct: 1    MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
             + CK+CGQR F CPGH GHIDLV  VYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61   TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVP--NY-NSKNLKQHSW 580
              +LELIIKGDI+ AK                            P  NY N +NLK   W
Sbjct: 121  VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180

Query: 581  TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 757
            TSLQ++EA   L + +  + T+C  C AKNP+I+ P FGW H+N MP+   RAN+I+G  
Sbjct: 181  TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240

Query: 758  LNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 931
            L +   G       G+EE   D     DVD+ +  S    + GT D+A +   KG    P
Sbjct: 241  LGETFSG-------GEEE--KDLGTSSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVP 291

Query: 932  E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1108
              F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+     G K  +S+FF+ 
Sbjct: 292  SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348

Query: 1109 ALLVPPIKLRPPSKGGDSVMEHPQTVLLNK 1198
             +LVPPIK R PSKGGDSVMEHPQTVLL+K
Sbjct: 349  VVLVPPIKFRLPSKGGDSVMEHPQTVLLSK 378


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  360 bits (925), Expect = 5e-97
 Identities = 192/382 (50%), Positives = 241/382 (63%), Gaps = 3/382 (0%)
 Frame = +2

Query: 62   TEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLC 241
            ++GATES++++ FSFLT+EEVR  SF KITNP LLD + RP P GLYDPA+GPL +RT+C
Sbjct: 8    SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67

Query: 242  KSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQL 421
            K+CGQRS  CPGHCGHIDLVSPVYNPLLF  L  LLQRTCF C+HFR+ R QV+KC  QL
Sbjct: 68   KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127

Query: 422  ELIIKGDIVGAK--XXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSLQY 595
            ELI+KGDIVGAK                         +   V   + ++ +Q  WTSLQ+
Sbjct: 128  ELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQF 187

Query: 596  SEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLS 772
            +EAMS+L+  +  +  +CK C + NP IT P FGWFH + M +   RAN+I G +L  L 
Sbjct: 188  TEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLL 247

Query: 773  MGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKE 952
                             S   G  D  DA   G  + GT    +K +   L  EF +QK 
Sbjct: 248  ----------------GSEIEGTTDVEDAAEPGDQHSGTKKHKKKERKEVL--EFTRQKS 289

Query: 953  FFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIK 1132
             FS  LLPSEVK  ++LLW+NE ++CS I D+QQ+       K   +MFF+E +LVPPIK
Sbjct: 290  TFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQ--EFGKRKAGPAMFFLETILVPPIK 347

Query: 1133 LRPPSKGGDSVMEHPQTVLLNK 1198
             RPP+KGGDSVMEHPQTVLL+K
Sbjct: 348  FRPPTKGGDSVMEHPQTVLLSK 369


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  349 bits (895), Expect = 2e-93
 Identities = 194/384 (50%), Positives = 240/384 (62%), Gaps = 1/384 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            MA TTEGA+ESV+ V FSF+TNEEVR  S  K+T PILLD +GRP   GLYDPAMG L++
Sbjct: 1    MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
             TLCKSCGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR     V+ C
Sbjct: 61   TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSL 589
               LELI+ G+I  AK                 + R K     +  Y  KN +  +WTSL
Sbjct: 121  KTLLELILDGEIAKAK--------ELEEEWMNSKSRTKS-SHSMYTYERKNGQPETWTSL 171

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSKLNK 766
            Q+SEA+S++ + +  +++ CK CGAK+PKIT P FGWFH+  +     RAN I+ SK   
Sbjct: 172  QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 231

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 946
            +S G            A   S++ +  +T+A         T +  + V      PE   Q
Sbjct: 232  VSSG------------AEGVSSLEEETTTEA---------TVEDFEDVS-----PEVFMQ 265

Query: 947  KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1126
            K F SG LLPSEVK+ +K LW+NE  LCS I DI Q+     G K  +SMFF+E++LVPP
Sbjct: 266  KNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPP 322

Query: 1127 IKLRPPSKGGDSVMEHPQTVLLNK 1198
            IK RPP+KGGDSVMEHPQTVLLNK
Sbjct: 323  IKFRPPAKGGDSVMEHPQTVLLNK 346


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  344 bits (882), Expect = 5e-92
 Identities = 189/384 (49%), Positives = 243/384 (63%), Gaps = 1/384 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            M  TTEGAT SVEAV FSFLT++E+R  S  KIT+PIL+D L  P PDGLYD A+GP +D
Sbjct: 1    MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
            ++LCKSCGQ S  CPGH GHI+LVSPVYNPL+F IL N+LQRTCF C+HFR   ++V   
Sbjct: 61   KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSL 589
              QLELI+KGDI+ AK                      G   +   Y+++ L + +WTSL
Sbjct: 121  TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGE-NWTSL 179

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 766
            Q+SEAMS+L +L+T +  +C++CGAKNPKI+ P FGWFH+N +    TRA+ I+      
Sbjct: 180  QFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIR------ 233

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 946
                      + + E  ND  ++G  D+TD E          D  +K K  Y     L +
Sbjct: 234  ----------SVESETTNDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYK----LAE 279

Query: 947  KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1126
            +   SG LLPS+VK  ++LLWENE +LCS I DIQ +     G K  +SMFF+E + VPP
Sbjct: 280  QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPP 336

Query: 1127 IKLRPPSKGGDSVMEHPQTVLLNK 1198
            IK RPP+KGGD+VMEHPQTVLL K
Sbjct: 337  IKFRPPTKGGDNVMEHPQTVLLTK 360


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  340 bits (872), Expect = 7e-91
 Identities = 189/378 (50%), Positives = 235/378 (62%), Gaps = 1/378 (0%)
 Frame = +2

Query: 68   GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 247
            GA+ESV+ V FSF+TNEEVR  S  K+T PILLD +GRP   GLYDPAMG L++ TLCKS
Sbjct: 13   GASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKS 72

Query: 248  CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 427
            CGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR     V+ C   LEL
Sbjct: 73   CGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLEL 132

Query: 428  IIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 607
            I+ G+I  AK                 + R K     +  Y  KN +  +WTSLQ+SEA+
Sbjct: 133  ILDGEIAKAK--------ELEEEWMNSKSRTKS-SHSMYTYERKNGQPETWTSLQFSEAI 183

Query: 608  SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSKLNKLSMGKA 784
            S++ + +  +++ CK CGAK+PKIT P FGWFH+  +     RAN I+ SK   +S G  
Sbjct: 184  SVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSG-- 241

Query: 785  KRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 964
                      A   S++ +  +T+A         T +  + V      PE   QK F SG
Sbjct: 242  ----------AEGVSSLEEETTTEA---------TVEDFEDVS-----PEVFMQKNFSSG 277

Query: 965  PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKLRPP 1144
             LLPSEVK+ +K LW+NE  LCS I DI Q+     G K  +SMFF+E++LVPPIK RPP
Sbjct: 278  HLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPP 334

Query: 1145 SKGGDSVMEHPQTVLLNK 1198
            +KGGDSVMEHPQTVLLNK
Sbjct: 335  AKGGDSVMEHPQTVLLNK 352


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  325 bits (832), Expect = 3e-86
 Identities = 174/381 (45%), Positives = 244/381 (64%), Gaps = 3/381 (0%)
 Frame = +2

Query: 65   EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 244
            +GA+E+VEAV FSF+T+EEVR  S  K+T+P LLD L  P P+GLYDPAMGPL+  + CK
Sbjct: 3    QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 245  SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 424
             C Q +  C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC  +LE
Sbjct: 63   FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 425  LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNL-KQHSWTSLQYSE 601
            LI KGD+VGAK                    +      +   + +   K+ SW + Q++E
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE 180

Query: 602  AMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANII-KGSKLNKLSMG 778
            AM+++D ++  +  +C  C AKNPKI  P+FG FH+++ NK  R N I  G + N    G
Sbjct: 181  AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240

Query: 779  KAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLKQKEF 955
             ++ N + +  NA +   +G+ +++   +S    DG  +S A+K +GG       +QK+ 
Sbjct: 241  GSEENPSPEVVNATE--PLGEAETSLCVTS---TDGVENSKARKRQGGDQSDVVEQQKDS 295

Query: 956  FSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKL 1135
            FS   LPS+V++ ++ LWENE  LC+  CDIQ +  + SG     SMFF++++LVPPIK 
Sbjct: 296  FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKF 355

Query: 1136 RPPSKGGDSVMEHPQTVLLNK 1198
            RPP+KGGDS+MEHP TVLL K
Sbjct: 356  RPPAKGGDSIMEHPHTVLLGK 376


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  323 bits (829), Expect = 7e-86
 Identities = 175/385 (45%), Positives = 243/385 (63%), Gaps = 7/385 (1%)
 Frame = +2

Query: 65   EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 244
            +GA+E+VEAV FSF+T+EEVR  S  K+T+P LLD L  P P+GLYDPAMGPL+  + CK
Sbjct: 3    QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62

Query: 245  SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 424
             C Q +  C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC  +LE
Sbjct: 63   FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120

Query: 425  LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGL-----PRQVPNYNSKNLKQHSWTSL 589
            LI KGD+VGAK                    +         R    YN    K+ SW + 
Sbjct: 121  LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN----KRPSWDNF 176

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANII-KGSKLNK 766
            Q++EAM+++D ++  +  +C  C AKNPKI  P+FG FH+++ NK  R N I  G + N 
Sbjct: 177  QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNL 236

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLK 943
               G ++ N + +  NA +   +G+ +++   +S    DG  +S  +K +GG       +
Sbjct: 237  HDTGGSEENPSPEVVNATE--PLGEAETSLCVTS---TDGVENSKGRKRQGGDQSDVVEQ 291

Query: 944  QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1123
            QK+ FS   LPS+V++ ++ LWENE  LC+  CDIQ +  + SG     SMFF++++LVP
Sbjct: 292  QKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVP 351

Query: 1124 PIKLRPPSKGGDSVMEHPQTVLLNK 1198
            P+K RPP+KGGDS+MEHP TVLL K
Sbjct: 352  PVKFRPPAKGGDSIMEHPHTVLLGK 376


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score =  322 bits (824), Expect = 3e-85
 Identities = 180/385 (46%), Positives = 231/385 (60%), Gaps = 3/385 (0%)
 Frame = +2

Query: 53   AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 232
            A TTEGA++ VE+V FSF+T ++VR  SF K+T+PILLDN+ RP P GLYDP MGPL D+
Sbjct: 4    AQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDK 63

Query: 233  TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 412
              CKSCGQ    CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF      VKKC 
Sbjct: 64   EACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCV 123

Query: 413  LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPR-QVPNYNSKNLKQHSWTSL 589
             QL+LI+KGDIV AK                      G+           +++   WTSL
Sbjct: 124  SQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSL 183

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSKLNK 766
            Q++E  +++   M     EC +C AKNPK+  P FGW  +  M      AN+I+G K+ K
Sbjct: 184  QFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKK 243

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDS-TDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 943
                     ST   EN +DS     +D+ ++AE S        D  ++ K   +  EF K
Sbjct: 244  ---------STSSVENPDDSG----IDALSEAEDS--------DKEKREKSTEIAKEFEK 282

Query: 944  QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1123
            QK+     LLPSEV+  +K LWENE + CS I D+ Q        K +YSMFF+E++LVP
Sbjct: 283  QKD-TKRDLLPSEVRAILKNLWENEHEYCSFIGDLWQS----GSEKIDYSMFFLESVLVP 337

Query: 1124 PIKLRPPSKGGDSVMEHPQTVLLNK 1198
            PIK RPP+KGGDSVMEHPQTV LNK
Sbjct: 338  PIKFRPPTKGGDSVMEHPQTVGLNK 362


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  315 bits (808), Expect = 2e-83
 Identities = 177/386 (45%), Positives = 234/386 (60%), Gaps = 3/386 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            M   TEG T SV+AVGFSFLT++E+   S  KITNPILL+ L  P   GLYDPA+GPL+D
Sbjct: 1    MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
            ++LCKSCGQ S  CPGH GHI+LVSPVYNPL+F IL ++LQRTCF C+HF  +R++V+  
Sbjct: 61   KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQ--HSWT 583
              Q ELI+KGDI+ AK                                S+ ++Q   +W+
Sbjct: 121  TSQFELIMKGDIIRAKSLDSIISDESNHSGDGD--------------ESQGVEQLGENWS 166

Query: 584  SLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKL 760
            SLQ+SEAMS+L + +  +  +C+ CG  NP+I+ P FGWFH+N + +   RAN ++    
Sbjct: 167  SLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRAL-- 224

Query: 761  NKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFL 940
                          + E  ND  ++G  ++T+ E   +   GT     K K G L  +  
Sbjct: 225  --------------ESETINDDMSLGGGETTEEED--ITSTGTA-KRDKRKKGKLSSKLA 267

Query: 941  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1120
             Q +  SG LLPS+VK  ++LLWENE +LCS I DIQ +     G K  +SMFF+E + V
Sbjct: 268  AQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFV 323

Query: 1121 PPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            PPIK RPP+KGGD VMEHPQTVLL K
Sbjct: 324  PPIKFRPPTKGGDDVMEHPQTVLLTK 349


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score =  314 bits (804), Expect = 5e-83
 Identities = 172/383 (44%), Positives = 223/383 (58%), Gaps = 1/383 (0%)
 Frame = +2

Query: 53   AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 232
            A T EGA++ VE+V FSF+T E+VR  S  K+TNP+LLDN+ RP P GLYDP MGPL+DR
Sbjct: 4    AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63

Query: 233  TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 412
            T CKSCGQ S  CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF  N+  V++C 
Sbjct: 64   TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123

Query: 413  LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSLQ 592
             QL+LI+KG++V AK                     +    +       ++ +  WTSLQ
Sbjct: 124  SQLKLIMKGNLVAAKQLDSRATDSSE--------ECEDSEMEKERCEDSDMGKQRWTSLQ 175

Query: 593  YSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFH-VNMPNKYTRANIIKGSKLNKL 769
            ++E   L++  +  +   C  C AK PK+  P FGW   V M      AN+I+G K+ K 
Sbjct: 176  FAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKK- 234

Query: 770  SMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQK 949
                    S    EN NDS      D +  ++   V DG+    +K K   +  EF K +
Sbjct: 235  --------SASSVENPNDS------DDSGIDALSEVEDGS--EKKKRKSSEVAEEFAKHQ 278

Query: 950  EFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPI 1129
                  L PSEVK  +K LWENE + CS I D+ Q          +YSMFF+E +LVPP 
Sbjct: 279  NNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQS----ESENVDYSMFFLENILVPPT 334

Query: 1130 KLRPPSKGGDSVMEHPQTVLLNK 1198
            K R P+KGGDSVMEHPQTV LNK
Sbjct: 335  KFRAPTKGGDSVMEHPQTVGLNK 357


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  305 bits (780), Expect = 3e-80
 Identities = 171/403 (42%), Positives = 231/403 (57%), Gaps = 23/403 (5%)
 Frame = +2

Query: 59   TTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTL 238
            +TE  TE VEAV F F T+EE R  S  KITNP L+D LG+P P GLYDPAMG L++R++
Sbjct: 3    STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62

Query: 239  CKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQ 418
            C+SCGQR++ C GHCGHI+LVS  YNPLLF  L N+L +TC +C  F  + E+ +    Q
Sbjct: 63   CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122

Query: 419  LELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNS-------------- 556
            LELI KGD+ GAK                         R+    +               
Sbjct: 123  LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182

Query: 557  KNLKQHSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN--KYT 730
            K+ +Q SW+S Q +EA+S+++E +  +  +C  C  + PKI+ P FGWF V      K  
Sbjct: 183  KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242

Query: 731  RANIIKGSKLNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDS---- 898
            R N+I+  KL++      + N + +  NA D S   D ++ ++ S     + T  S    
Sbjct: 243  RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302

Query: 899  ---AQKVKGGYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSI 1069
               A+K+  G   P F     + SGPLLPS+V++ +KLLWE E   CS I DIQ+++   
Sbjct: 303  VNRAKKLNPGSGDPNF-----YLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKP 357

Query: 1070 SGMKGNYSMFFIEALLVPPIKLRPPSKGGDSVMEHPQTVLLNK 1198
             G K  YSMFF+E +LVPPI+ RPP+KGGDSVMEHPQTVLL K
Sbjct: 358  FGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGK 400


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score =  302 bits (773), Expect = 2e-79
 Identities = 172/384 (44%), Positives = 227/384 (59%), Gaps = 1/384 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            MA  TEGAT SV+AV FSFLT+EE+   S  KITNPILLD L  P   GLYDPA+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
            ++ C+SCGQ S+ CPGH GHI+LVSPVYNPL+F +L N+L+RTCF C+HF+ +R +V+  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSL 589
            A QLELI+KG+I  AK                   +           +S      +WTSL
Sbjct: 121  ANQLELIMKGNIAKAKNLDAINLDESADLSDGNDSQC----------SSDEQLGENWTSL 170

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 766
            Q+SEAMS+L + +  +  +C+ CG  NPKIT P FGWFHV  +     RAN+I G   + 
Sbjct: 171  QFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASL 230

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 946
             S            E  +D  ++G+ D+TD E   +    T +S  K +        L +
Sbjct: 231  AS------------EIIHDDISLGNGDTTDVED--ITSGDTANSNAKRQNK------LAR 270

Query: 947  KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1126
                SG LLPS+V+  ++LLWENE +LC  I DIQ +     G K  +SMFF++ + VPP
Sbjct: 271  HNKLSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPP 327

Query: 1127 IKLRPPSKGGDSVMEHPQTVLLNK 1198
            IK RPP+KG D V EH QTVLL +
Sbjct: 328  IKFRPPTKGDDKVSEHAQTVLLTR 351


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score =  301 bits (770), Expect = 5e-79
 Identities = 170/386 (44%), Positives = 228/386 (59%), Gaps = 3/386 (0%)
 Frame = +2

Query: 50   MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 229
            MA  TEGAT SV+AV FSFLT+EE+   S  KITNPILLD L  P   GLYDPA+GP  +
Sbjct: 1    MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60

Query: 230  RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 409
            ++ C+SCGQ S+ CPGH GHI+LVSP YNPL+F +L N+L+RTCF C+HF+ +R++V+  
Sbjct: 61   KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120

Query: 410  ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSL 589
            A QLELI+KG+I  AK                   +           +S      +WTSL
Sbjct: 121  ANQLELIMKGNIAKAKNLDEINLDESADLCDGDDSQC----------SSAEQLGENWTSL 170

Query: 590  QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 766
            Q+SEAMS+L + +  +  +C+ CG  NPKIT P FGWFHV  +     RAN+I G+ ++ 
Sbjct: 171  QFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSL 230

Query: 767  LSMGKAKRNSTGKEENANDSSAMGDVDSTDAE--SSGVVYDGTPDSAQKVKGGYLYPEFL 940
             S            E  +D  ++G+ D+TD E  +SG + +       K K         
Sbjct: 231  AS------------EIIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEK--------Q 270

Query: 941  KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1120
                  +G LLPS+V+  ++LLWEN+ +LC  I DIQ   +   G K  +SMFF+E + V
Sbjct: 271  ISSHTLAGSLLPSQVQRILELLWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYV 327

Query: 1121 PPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            PPIK RPP+KG D V EH QTVLL +
Sbjct: 328  PPIKFRPPTKGDDKVSEHAQTVLLTR 353


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  296 bits (758), Expect = 1e-77
 Identities = 171/391 (43%), Positives = 222/391 (56%), Gaps = 16/391 (4%)
 Frame = +2

Query: 74   TESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR--TLCKS 247
            TES+ AV FSF T+EE    S  KIT P L+D LG P   GLYDPAMGPL+DR  T C++
Sbjct: 18   TESIRAVSFSFFTDEEASKQSVIKITKPDLVDELGTPVQGGLYDPAMGPLDDRSHTCCRT 77

Query: 248  CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 427
            CGQ ++ C GH GHID+V PVYNPLLF  L+ LLQRTCF C  FR +REQV+KC  QLEL
Sbjct: 78   CGQNAYNCQGHFGHIDIVLPVYNPLLFNHLYKLLQRTCFNCCCFRTSREQVQKCVSQLEL 137

Query: 428  IIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNS--------------KNL 565
            +++GD+V AK                       L    PN++S              ++ 
Sbjct: 138  VMRGDVVAAKR----------------------LDSDSPNHHSYLEEGGEGNDTERDRHS 175

Query: 566  KQHSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANII 745
            K   WTSLQ++EAMS+L+  +  Q+T CK CG KNPKIT P FGWF  +      R N+I
Sbjct: 176  KPERWTSLQFTEAMSILNCSLETQQT-CKNCGHKNPKITKPTFGWFERSGAEN-ARKNVI 233

Query: 746  KGSKLNKLSMGKAKRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYL 925
            +  KL    +G       G+    +  + + D+      +S  V   T     + +   +
Sbjct: 234  RRCKL----VGPLTVQEEGESCGDDVDAGISDISC----ASSFVTQVTATKKSEEQESIV 285

Query: 926  YPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFI 1105
              ++ KQKE  SG L P +VK  M LLW  E QLCS + DIQ   +     K  +SMFF+
Sbjct: 286  LDQYFKQKEALSGDLTPKKVKELMSLLWTKEAQLCSYLSDIQHNGVE---RKEGHSMFFL 342

Query: 1106 EALLVPPIKLRPPSKGGDSVMEHPQTVLLNK 1198
            E++LVPPIK RPP++ GDSVMEH QTV L +
Sbjct: 343  ESVLVPPIKFRPPARSGDSVMEHAQTVSLGE 373


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score =  295 bits (756), Expect = 2e-77
 Identities = 163/378 (43%), Positives = 215/378 (56%), Gaps = 1/378 (0%)
 Frame = +2

Query: 68   GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 247
            GA++ VE+V FSF+T ++VR  SF K+T+PILLDN+G P P GLYDP +GP+ED+  C +
Sbjct: 22   GASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVGEPYPGGLYDPKLGPIEDKKACDT 81

Query: 248  CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 427
            CGQ +  CPGHCGHI+LV P+Y+PLLF +L+N LQRTCF C+HF      V++   QL+L
Sbjct: 82   CGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFICHHFMAKPYDVERAVSQLKL 141

Query: 428  IIKGDIVGAKXXXXXXXXXXXXXXXXXRVRVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 607
            IIKGDIV AK                    V             +++   WTSLQ++E  
Sbjct: 142  IIKGDIVSAKQLESNTPTKSDSSDVSCESGV--TTDSSEGCEDSDMEDQRWTSLQFAEVT 199

Query: 608  SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLSMGKA 784
            +++   M      C RC A NP++  P FGW  +  M      AN+I+G KL K      
Sbjct: 200  AVMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKK------ 253

Query: 785  KRNSTGKEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 964
               ST   EN +      D D +  ++   V DG  D   + K   +  EF +       
Sbjct: 254  ---STSSVENPD------DFDDSGIDALSEVEDG--DKETREKSTEVVKEFEEHNNSSKR 302

Query: 965  PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKLRPP 1144
             LLP+EV+  +K LWENE   CS I D+ Q        K +YSMFF+E++LVPPIK RP 
Sbjct: 303  DLLPTEVREILKDLWENEHDFCSFIGDLWQS----GSEKIDYSMFFLESVLVPPIKFRPS 358

Query: 1145 SKGGDSVMEHPQTVLLNK 1198
            +KGGDSVMEHPQTV LNK
Sbjct: 359  TKGGDSVMEHPQTVGLNK 376