BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00025954
         (586 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              61   3e-15
emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]    53   7e-12
emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]    45   1e-09
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]          65   1e-08
gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]             64   2e-08
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      63   5e-08
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...    60   1e-07
emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]    62   2e-07
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    61   2e-07
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...    58   3e-07
gb|ABA93647.1| retrotransposon protein, putative, Ty3-gypsy subc...    59   3e-07
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap...    60   3e-07
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 60   3e-07
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap...    60   3e-07
ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p...    60   4e-07
emb|CAD39982.1| OSJNBa0032B23.2 [Oryza sativa Japonica Group]          59   5e-07
ref|XP_003634501.1| PREDICTED: uncharacterized protein LOC100854...    59   8e-07
emb|CAN78884.1| hypothetical protein VITISV_037609 [Vitis vinifera]    59   8e-07
emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]         59   8e-07
gb|ABF97332.1| retrotransposon protein, putative, Ty3-gypsy subc...    54   8e-07

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 61.2 bits (147), Expect(2) = 3e-15
 Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +2

Query: 224 LKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICH 394
           L    +VNI E    + + V AE+ P    +LI  LKRN   FAWS E+M GI P +  H
Sbjct: 755 LCRTEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAH 814

Query: 395 HLNVESGIRPVKQKPR 442
            LNV+   +PVKQK R
Sbjct: 815 ELNVDPTFKPVKQKRR 830



 Score = 46.2 bits (108), Expect(2) = 3e-15
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKGAK 119
           YN ILG  W H+M A+PSTY+Q ++F T  G++ ++  K
Sbjct: 703 YNVILGTPWIHQMQAIPSTYHQCVKFPTHNGIFTLRAPK 741


>emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
          Length = 781

 Score = 52.8 bits (125), Expect(2) = 7e-12
 Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +2

Query: 215 PPCLKNVRIVNIGEEKQ--I*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 388
           PP    ++ + I EE      + + L P+E  ++ + L++N DVFAW+  +M GI P + 
Sbjct: 448 PPAADPLQAIQISEEGTHLTNISSLLTPEETRNMQNALRQNHDVFAWAHSDMKGIHPSIT 507

Query: 389 CHHLNVESGIRPVKQKPR 442
            H LNV    RP++Q+ R
Sbjct: 508 SHRLNVLPTARPIQQRVR 525



 Score = 43.5 bits (101), Expect(2) = 7e-12
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDI 107
           +N ILGR W H M  +PSTYYQ++ F T  G  D+
Sbjct: 380 FNVILGRTWLHYMKVIPSTYYQMVSFLTKDGQIDL 414


>emb|CAN74139.1| hypothetical protein VITISV_038754 [Vitis vinifera]
          Length = 1387

 Score = 45.1 bits (105), Expect(2) = 1e-09
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +2

Query: 233 VRIVNIGEEKQ--I*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNV 406
           +R + I EE      + + L  +E  ++ D L+++ DVFAW+  +M GI P +I H LNV
Sbjct: 510 LRTIQISEEDTHLTYISSLLTLEETRNIQDALRQSHDVFAWAHSDMKGIHPSIISHKLNV 569

Query: 407 ESGIRPVKQKPR 442
               R V+Q+ R
Sbjct: 570 LPTARLVRQRIR 581



 Score = 43.5 bits (101), Expect(2) = 1e-09
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKGAK 119
           ++ ILGR W H M A+PSTY+Q++ F T  G  D+ G++
Sbjct: 444 FDVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQ 482


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = +2

Query: 215 PPCLKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGV 385
           PP    V  VN+G+E   K I +  +L   E EDLI  ++   DVFAW+ E+M G+ P V
Sbjct: 106 PPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLDPKV 165

Query: 386 ICHHLNVESGIRPVKQKPR 442
             HHLN++   +PVKQ+ R
Sbjct: 166 AMHHLNIDPDAKPVKQQQR 184


>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
          Length = 1902

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 27/72 (37%), Positives = 48/72 (66%)
 Frame = +2

Query: 227  KNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNV 406
            K V+++    E+++ + A L P+   +L+ +L+ N D FAWS E++ G++  +I H LN+
Sbjct: 838  KQVQLLEGNTERKVLISANLDPQSEGNLVTFLRENSDTFAWSAEDLKGVNRSMIEHSLNI 897

Query: 407  ESGIRPVKQKPR 442
            ++G RP+KQK R
Sbjct: 898  KTGYRPIKQKLR 909


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 35/68 (51%), Positives = 43/68 (63%)
 Frame = +2

Query: 242 VNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVESGIR 421
           V I   + + V   L PK   DL+D L++NKDVFA+S  EM G+S  VI H LNV S  R
Sbjct: 250 VEIDPGRTVTVGVGLEPKFRADLLDLLRKNKDVFAYSAAEMPGVSREVIVHKLNVLSNAR 309

Query: 422 PVKQKPRS 445
           PVKQK R+
Sbjct: 310 PVKQKMRN 317


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score = 59.7 bits (143), Expect(2) = 1e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = +2

Query: 224  LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
            LK V +      K + V +ELG     +L+  L+ + D+FAWS E+M GI  G+ CH L 
Sbjct: 793  LKEVVVSRSDPSKVVKVGSELGEAIKGELVKCLQSHADIFAWSHEDMPGIDRGIACHKLA 852

Query: 404  VESGIRPVKQKPR 442
            V+ G RPV+QK R
Sbjct: 853  VKRGARPVRQKRR 865



 Score = 21.9 bits (45), Expect(2) = 1e-07
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKG 113
           Y  ILGR +      V ST+Y  L++  +  +  +KG
Sbjct: 718 YQMILGRPFMRISQCVISTHYLALKYRINGVVGVVKG 754


>emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]
          Length = 1734

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = +2

Query: 218  PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 388
            P   N+ +++ G   + ++I + + L P E   LID L+   DVFAWS E+M G+ P ++
Sbjct: 782  PISSNIELIDFGALDQPREIRIGSSLSPDERSRLIDLLRSYLDVFAWSYEDMPGLDPTIV 841

Query: 389  CHHLNVESGIRPVKQKPR 442
             HHL +    RPVKQK R
Sbjct: 842  QHHLPILPHARPVKQKLR 859


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = +2

Query: 215 PPCLKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGV 385
           PP    V  +N+G+E   K I +  +L   E E+LI  ++   DVFAW+ E+M G+ P V
Sbjct: 610 PPTEDKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLDPKV 669

Query: 386 ICHHLNVESGIRPVKQKPR 442
             H LN++  ++PVKQ+ R
Sbjct: 670 AMHRLNIDPDVKPVKQQQR 688


>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score = 58.2 bits (139), Expect(2) = 3e-07
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = +2

Query: 224 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
           L+ V I      + + V +ELG     +L+  L+ + DVFAWS E+M GI  G+ CH L 
Sbjct: 626 LEEVVISRSDPSRVVKVGSELGEAIKAELVKCLQSHADVFAWSHEDMPGIDRGIACHKLA 685

Query: 404 VESGIRPVKQKPR 442
           V+ G RPV+QK R
Sbjct: 686 VKRGARPVRQKRR 698



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKG 113
           Y  ILGR +      V ST+Y  L++  +  +  +KG
Sbjct: 551 YQMILGRPFMRISQCVMSTHYLALKYRINGVVGVVKG 587


>gb|ABA93647.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 942

 Score = 58.9 bits (141), Expect(2) = 3e-07
 Identities = 27/73 (36%), Positives = 47/73 (64%)
 Frame = +2

Query: 224 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
           +  V+I +    K + +  ++G +E+E +++ LK+N D+FAWS +E+ G+   +I HHL 
Sbjct: 134 ITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLA 193

Query: 404 VESGIRPVKQKPR 442
           V+  I+P KQK R
Sbjct: 194 VKPNIKPRKQKLR 206



 Score = 21.6 bits (44), Expect(2) = 3e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKG 113
           YNAI GR   ++  A+    Y  L+     G+  +KG
Sbjct: 57  YNAIFGRATLNKFKAISHHNYLKLKMPGPTGVIVVKG 93


>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
           gi|31431922|gb|AAP53628.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1292

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 28/73 (38%), Positives = 47/73 (64%)
 Frame = +2

Query: 224 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
           +  V+I ++   K + +  ++G  ELE +++ LK+N D+FAWS +E+ G+   +I HHL 
Sbjct: 529 MTTVQIDDVDPTKLVSLGGDMGEGELESILEVLKKNIDIFAWSPDEVGGVPANLIMHHLA 588

Query: 404 VESGIRPVKQKPR 442
           V+  I+P KQK R
Sbjct: 589 VKPDIKPRKQKLR 601


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 28/63 (44%), Positives = 40/63 (63%)
 Frame = +2

Query: 254 EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVESGIRPVKQ 433
           +E+   V ++L   E E+++ +L+ N DVFAW+T ++ GI P  ICHHLNV     P KQ
Sbjct: 37  KERYFSVGSQLPALEREEVVQFLQDNIDVFAWTTYDVSGIDPEFICHHLNVSHNAMPRKQ 96

Query: 434 KPR 442
            PR
Sbjct: 97  PPR 99


>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1291

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 28/73 (38%), Positives = 47/73 (64%)
 Frame = +2

Query: 224 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
           +  V+I ++   K + +  ++G  ELE +++ LK+N D+FAWS +E+ G+   +I HHL 
Sbjct: 596 MTTVQIDDVDPTKLVSLGGDMGEGELESILEVLKKNIDIFAWSPDEVGGVPANLIMHHLA 655

Query: 404 VESGIRPVKQKPR 442
           V+  I+P KQK R
Sbjct: 656 VKPDIKPRKQKLR 668


>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
           trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
           protein AMTR_s04653p00000520, partial [Amborella
           trichopoda]
          Length = 563

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 34/101 (33%), Positives = 54/101 (53%)
 Frame = +2

Query: 224 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
           + N +++ IG    I +R        E L  +LK+N D+FAW   +M+GISP V+CH LN
Sbjct: 475 IDNNKVLKIGSRLNIQLR--------EQLTTFLKQNLDIFAWKHSDMVGISPQVMCHRLN 526

Query: 404 VESGIRPVKQKPRS*FRSLFIPSFPFQQKPPKLTLLIALGF 526
           ++  +R V+QK R       +    +Q    ++  L+A GF
Sbjct: 527 IDPEVRGVRQKRRK------MDPARYQALKEEVDRLLACGF 561


>emb|CAD39982.1| OSJNBa0032B23.2 [Oryza sativa Japonica Group]
          Length = 337

 Score = 58.5 bits (140), Expect(2) = 5e-07
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +2

Query: 233 VRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVES 412
           V+I +    K + +  ++G +E E +++ LKRN D+FAWS +E+ G+S  +I HHL V+ 
Sbjct: 215 VQIDDADPAKLVSLGGDMGEEEAESILEVLKRNIDIFAWSPDEVGGVSTYLIMHHLAVKP 274

Query: 413 GIRPVKQKPR 442
             +P KQK R
Sbjct: 275 NTKPKKQKLR 284



 Score = 21.2 bits (43), Expect(2) = 5e-07
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKGAK 119
           YNAI GR   ++  A+    Y  L+     G+  +KG +
Sbjct: 157 YNAIFGRATLNKFDAISHHNYLKLKMPGPTGVILVKGLR 195


>ref|XP_003634501.1| PREDICTED: uncharacterized protein LOC100854161 [Vitis vinifera]
          Length = 2078

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = +2

Query: 218  PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 388
            P   +  +++ G   + ++I + + L P E   LID L+   DVFAWS E+M G+ P ++
Sbjct: 984  PISSSTELIDFGAPDQPREIRIGSSLSPNERSRLIDLLRSYLDVFAWSYEDMSGLDPTIV 1043

Query: 389  CHHLNVESGIRPVKQKPR 442
             HHL +    RPVKQK R
Sbjct: 1044 QHHLPILPHARPVKQKLR 1061


>emb|CAN78884.1| hypothetical protein VITISV_037609 [Vitis vinifera]
          Length = 1731

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = +2

Query: 218  PCLKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 388
            P  + V IV+ G E   K++ + + L   E + LI  L+   DVFAWS E+M G+ P ++
Sbjct: 833  PATRTVEIVDFGTEDQPKELKIGSPLSTDERDRLIHLLRSYLDVFAWSYEDMPGLDPSIV 892

Query: 389  CHHLNVESGIRPVKQKPR 442
             HHL +    RPVKQK R
Sbjct: 893  QHHLPILPHARPVKQKLR 910


>emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
          Length = 1847

 Score = 58.5 bits (140), Expect(2) = 8e-07
 Identities = 27/73 (36%), Positives = 47/73 (64%)
 Frame = +2

Query: 224  LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 403
            +  V+I +    K + +  ++G +E+E +++ LK+N D+FAWS +E+ G+   +I HHL 
Sbjct: 950  ITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLA 1009

Query: 404  VESGIRPVKQKPR 442
            V+  I+P KQK R
Sbjct: 1010 VKPDIKPRKQKLR 1022



 Score = 20.4 bits (41), Expect(2) = 8e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKG 113
           YNAI GR   ++  A+    Y  L+     G+  +KG
Sbjct: 873 YNAIFGRATLNKFEAIFHHNYLKLKMPGPTGVIVVKG 909


>gb|ABF97332.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1229

 Score = 54.3 bits (129), Expect(2) = 8e-07
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = +2

Query: 260 KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVESGIRPVKQKP 439
           K + +  ++G +E +++++ LK+N D+FAW  +E+ G+S  +I HHL V+   +P KQK 
Sbjct: 627 KLVSLGGDMGEEEAKNILEVLKKNIDIFAWGPDEVGGVSADLIMHHLAVKPDAKPRKQKL 686

Query: 440 RS*FR-SLFIPSFPFQQKPPKLTLLIALGFHYLISLGFFIKRLICYYDL 583
               + S+    FP     P      A GF   + L  F+     YY +
Sbjct: 687 CKILKQSMSEGQFPLATNRP------ARGFDSRLQLMSFLDAYSGYYQI 729



 Score = 24.6 bits (52), Expect(2) = 8e-07
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   YNAILGR*WTHEMWAVPSTYYQVLRFSTSQGMWDIKGAK*Q--LRCTLWVRKSVPKEKAN 176
           YNAI GR   ++  A+    Y  L+    +G+  +KG +     +C L + K   +    
Sbjct: 538 YNAIFGRATLNKFEAISHHNYLKLKMPGPKGVIVVKGLQLSPASKCVLAIIKRAVRNVEA 597

Query: 177 NSNYSGGQVSKMDPH 221
             +      SK  PH
Sbjct: 598 EPHDRAKHASKPAPH 612