BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00025929
         (1033 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284465.1| PREDICTED: general transcription factor IIH ...   376   e-102
ref|XP_007019036.1| Basal transcription factor complex subunit-r...   358   2e-96
ref|XP_002307429.2| basal transcription factor complex subunit-r...   353   5e-95
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun...   347   4e-93
ref|XP_004152842.1| PREDICTED: general transcription factor IIH ...   343   7e-92
ref|XP_004290858.1| PREDICTED: general transcription factor IIH ...   340   4e-91
ref|XP_004290857.1| PREDICTED: general transcription factor IIH ...   340   4e-91
ref|XP_006472762.1| PREDICTED: general transcription factor IIH ...   335   1e-89
ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutr...   328   3e-87
ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arab...   327   5e-87
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...   325   2e-86
ref|XP_004241513.1| PREDICTED: general transcription factor IIH ...   325   2e-86
ref|NP_564050.1| basal transcription factor complex subunit-rela...   322   1e-85
gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus...   320   6e-85
ref|XP_006472763.1| PREDICTED: general transcription factor IIH ...   319   1e-84
ref|XP_004500559.1| PREDICTED: general transcription factor IIH ...   319   1e-84
ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Caps...   319   1e-84
ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phas...   305   3e-80
ref|XP_003523449.1| PREDICTED: general transcription factor IIH ...   303   8e-80
gb|ADE77788.1| unknown [Picea sitchensis]                             301   3e-79

>ref|XP_002284465.1| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera] gi|302141830|emb|CBI19033.3| unnamed protein
           product [Vitis vinifera]
          Length = 297

 Score =  376 bits (966), Expect = e-102
 Identities = 184/237 (77%), Positives = 197/237 (83%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSCN+++DSSS PA    LENGRMPALCS  L+KLE+FV  DE++++E        
Sbjct: 61  ATGCNSCNFIFDSSSVPAN-PNLENGRMPALCSNLLQKLEEFVTGDEKLSKEVLAAGIGS 119

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFR+GPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID
Sbjct: 120 SLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 179

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC+IGAQHSAFLQQASYITGGVYLK QQLDGLFQYLSTVFATDL SR FLQLPKP GVDF
Sbjct: 180 SCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLPKPAGVDF 239

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           RASCFCHK TIDMGYICSVCLSIFCKHHK CSTCGSVFGQA  +  S +DRKRKTPE
Sbjct: 240 RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKRKTPE 296


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
           transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score =  358 bits (919), Expect = 2e-96
 Identities = 173/237 (72%), Positives = 193/237 (81%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSCNY++DSSS     ++ ENGRMP +CS  L+KLE+F+++DE++++E        
Sbjct: 61  ATGYNSCNYIFDSSSD--LNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPEGRIKS 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSG LHP PRILCLQGSPDGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119 SLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +GAQ+SAFLQQASYITGGV+ K Q LDGLFQYL T+FATDL SRSFL LPKPVGVDF
Sbjct: 179 SCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSFLHLPKPVGVDF 238

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           RASCFCHK TIDMGYICSVCLSIFCKHHK CSTCGSVFGQA  E  STSD+KRKTPE
Sbjct: 239 RASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASTSDKKRKTPE 295


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
           transcription factor complex subunit-related family
           protein [Populus trichocarpa]
          Length = 298

 Score =  353 bits (907), Expect = 5e-95
 Identities = 169/237 (71%), Positives = 196/237 (82%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           A+G N+C+Y+YDSSS  + + + E+GRMP+L S  L+KLE+F+++DE++ +E++      
Sbjct: 62  ASGYNTCDYIYDSSSDASQLGS-EDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID
Sbjct: 121 SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 180

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +GA +SAFLQQASYITGGVY+K Q LDGLFQYL+TVFATDL SRSF+QLP+P GVDF
Sbjct: 181 SCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVDF 240

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           RASCFCHK TIDMGYICSVCLSIFC HHK CSTCGSVFGQA  + +STSD KRK PE
Sbjct: 241 RASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLKRKAPE 297


>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
           gi|462420187|gb|EMJ24450.1| hypothetical protein
           PRUPE_ppa009386mg [Prunus persica]
          Length = 295

 Score =  347 bits (891), Expect = 4e-93
 Identities = 173/237 (72%), Positives = 194/237 (81%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC+Y+YDSS+S  T +  +NGRMPA C   L+KLE+FV+ DE++ +E        
Sbjct: 61  ATGYNSCSYIYDSSTS--TNQGSDNGRMPARCVNLLQKLEEFVIEDEQLIKEGLREGIAS 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSGPLHPQPRILCLQGS DGPEQYVA+MNAIFSAQRS VPID
Sbjct: 119 SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRS-VPID 177

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +G+ +SAFLQQASYITGGVYLK QQ +GLFQYLSTVFATDL SR+FLQLPK +GVDF
Sbjct: 178 SCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVDF 237

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           RASCFCHKKTIDMGYICSVCLSIFCKHHK CSTCGSVFGQA  +V STS++KRKTPE
Sbjct: 238 RASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTSNKKRKTPE 294


>ref|XP_004152842.1| PREDICTED: general transcription factor IIH subunit 3-like [Cucumis
           sativus]
          Length = 295

 Score =  343 bits (880), Expect = 7e-92
 Identities = 169/236 (71%), Positives = 189/236 (80%)
 Frame = +1

Query: 64  TGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXXX 243
           TG  SC Y+Y+SSS   +   LE+GRMPALC++ L+ LE+FV+ DE+  +E         
Sbjct: 62  TGYASCKYLYNSSSY--SNHGLEDGRMPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSS 119

Query: 244 XXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDS 423
                     CYIQ+VFRSG LHPQPRILCLQGSPDGPEQYVA+MNAIFSAQRSMVPIDS
Sbjct: 120 LLSGSLSMALCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDS 179

Query: 424 CIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDFR 603
           C IG+ +SAFLQQASYITGGVYLK QQ+DGLFQYLSTVF TDL SR+FLQLPK VGVDFR
Sbjct: 180 CYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFR 239

Query: 604 ASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           ASCFCHKKTIDMGY+CSVCLSIFCKHHK CSTCGSVFG+ P E+ S S  KRKTPE
Sbjct: 240 ASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSVFGETPVELDSVSKLKRKTPE 295


>ref|XP_004290858.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           2 [Fragaria vesca subsp. vesca]
          Length = 298

 Score =  340 bits (873), Expect = 4e-91
 Identities = 166/237 (70%), Positives = 191/237 (80%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG +SC+Y+YDS+S+P   +  + GRMPALCS  L+KLE+FV +DE++ +E +      
Sbjct: 61  ATGYSSCSYIYDSASAPG--QGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPS 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQ+VFRSGP HP PRILCLQGS DGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119 SLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +G+ +SAFLQQASYITGGVYLK QQ DGL QYL+TVFATDL SR+FLQLPK  GVDF
Sbjct: 179 SCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDF 238

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           RASCFCHKKTID GYICSVCLSIFCKHHK CSTCGSVFGQA  EV ST+++KRK+ E
Sbjct: 239 RASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSSE 295


>ref|XP_004290857.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           1 [Fragaria vesca subsp. vesca]
          Length = 300

 Score =  340 bits (873), Expect = 4e-91
 Identities = 166/237 (70%), Positives = 191/237 (80%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG +SC+Y+YDS+S+P   +  + GRMPALCS  L+KLE+FV +DE++ +E +      
Sbjct: 61  ATGYSSCSYIYDSASAPG--QGSDQGRMPALCSHLLKKLEEFVAKDEQLLKEGSAEGIPS 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQ+VFRSGP HP PRILCLQGS DGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119 SLLSGSLSMALCYIQKVFRSGPQHPHPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +G+ +SAFLQQASYITGGVYLK QQ DGL QYL+TVFATDL SR+FLQLPK  GVDF
Sbjct: 179 SCYMGSNNSAFLQQASYITGGVYLKPQQPDGLLQYLTTVFATDLHSRAFLQLPKSAGVDF 238

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRKTPE 771
           RASCFCHKKTID GYICSVCLSIFCKHHK CSTCGSVFGQA  EV ST+++KRK+ E
Sbjct: 239 RASCFCHKKTIDTGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEVPSTTNKKRKSSE 295


>ref|XP_006472762.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X1 [Citrus sinensis]
          Length = 298

 Score =  335 bits (860), Expect = 1e-89
 Identities = 166/240 (69%), Positives = 193/240 (80%), Gaps = 2/240 (0%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC+YVYDSSS+    +++ NGRMP+LC+  L+ LE+F+ +DE++ +++       
Sbjct: 61  ATGYNSCDYVYDSSSTGN--QSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIAC 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119 SLLSGSLSMALCYIQRVFRSGLLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPID 178

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +GAQ+SAFLQQASYITGGV+ K QQLDGLFQYL T+F TDL SR+FLQLPKPVGVDF
Sbjct: 179 SCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLPKPVGVDF 238

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQA--PPEVTSTSDRKRKTPEA 774
           RASCFCHK TIDMGYICSVCLSI+CKH K CSTCGSVFGQA    +  S ++RKRKT +A
Sbjct: 239 RASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPSATNRKRKTTDA 298


>ref|XP_006416613.1| hypothetical protein EUTSA_v10008316mg [Eutrema salsugineum]
           gi|557094384|gb|ESQ34966.1| hypothetical protein
           EUTSA_v10008316mg [Eutrema salsugineum]
          Length = 300

 Score =  328 bits (840), Expect = 3e-87
 Identities = 164/239 (68%), Positives = 186/239 (77%), Gaps = 2/239 (0%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXXXX 237
           ATG +SC+Y+YDSS +P          MPAL    LEKLEDF  +DE ++ EE+      
Sbjct: 61  ATGYSSCDYIYDSSLTPNGNFESSGSGMPALFGSLLEKLEDFAAKDEELSKEEEHEDRIA 120

Query: 238 XXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPI 417
                       CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MVPI
Sbjct: 121 SSLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMVPI 180

Query: 418 DSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVD 597
           DSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SR F+QLPKPVGVD
Sbjct: 181 DSCYIGTQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPVGVD 240

Query: 598 FRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTPE 771
           FRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   +V+S S++KRK P+
Sbjct: 241 FRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDVSSVSNKKRKAPD 299


>ref|XP_002892997.1| hypothetical protein ARALYDRAFT_472054 [Arabidopsis lyrata subsp.
           lyrata] gi|297338839|gb|EFH69256.1| hypothetical protein
           ARALYDRAFT_472054 [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score =  327 bits (838), Expect = 5e-87
 Identities = 166/240 (69%), Positives = 190/240 (79%), Gaps = 4/240 (1%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSS--SSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXX 231
           ATG +SC+Y+YDSS  S+   +E+   G MPAL    L+KLEDFV +DE ++ EE +   
Sbjct: 61  ATGYSSCDYIYDSSLTSNHGNLESNGTG-MPALFGSLLKKLEDFVTKDEELSREEVSEDR 119

Query: 232 XXXXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 411
                         CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MV
Sbjct: 120 IPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMV 179

Query: 412 PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 591
           PIDSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SRSF+QLPKP+G
Sbjct: 180 PIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRSFVQLPKPIG 239

Query: 592 VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTP 768
           VDFRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   + +S SD+KRK P
Sbjct: 240 VDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSVSDKKRKAP 299


>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           tuberosum]
          Length = 290

 Score =  325 bits (832), Expect = 2e-86
 Identities = 164/233 (70%), Positives = 181/233 (77%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC+YV+DSS+S             A C   LEKLEDFV +DE +++E +      
Sbjct: 64  ATGYNSCDYVFDSSTS---------SMQRAEC--LLEKLEDFVDKDESLSQEDSVDGVGF 112

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSGPLHPQPRILCL GSPDGP QYVAVMN+IFSAQRSMVPID
Sbjct: 113 SLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPID 172

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC+IG+QHSAFLQQASYITGGVYLK Q  DGLFQYLSTVFATDL SRSFLQLP+PVGVDF
Sbjct: 173 SCVIGSQHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLPRPVGVDF 232

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKR 759
           RASCFCHK TIDMG+ICSVCLSIFCKHHK CSTCGS FG+A  +  S SD++R
Sbjct: 233 RASCFCHKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285


>ref|XP_004241513.1| PREDICTED: general transcription factor IIH subunit 3-like [Solanum
           lycopersicum]
          Length = 290

 Score =  325 bits (832), Expect = 2e-86
 Identities = 164/233 (70%), Positives = 181/233 (77%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC+YV+DSS+S             A C   LEKLEDFV +DE +++E +      
Sbjct: 64  ATGYNSCDYVFDSSTS---------SMQRAEC--LLEKLEDFVDKDESLSQEDSVDGVGF 112

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSGPLHPQPRILCL GSPDGP QYVAVMN+IFSAQRSMVPID
Sbjct: 113 SLLSGALSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPID 172

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC+IG+QHSAFLQQASYITGGVYLK Q  DGLFQYLSTVFATDL SRSFLQLP+PVGVDF
Sbjct: 173 SCVIGSQHSAFLQQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRSFLQLPRPVGVDF 232

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKR 759
           RASCFCHK TIDMG+ICSVCLSIFCKHHK CSTCGS FG+A  +  S SD++R
Sbjct: 233 RASCFCHKNTIDMGFICSVCLSIFCKHHKKCSTCGSNFGEARKQDPSASDQRR 285


>ref|NP_564050.1| basal transcription factor complex subunit-related protein
           [Arabidopsis thaliana] gi|21537277|gb|AAM61618.1|
           unknown [Arabidopsis thaliana]
           gi|92856638|gb|ABE77412.1| At1g18340 [Arabidopsis
           thaliana] gi|332191584|gb|AEE29705.1| basal
           transcription factor complex subunit-related protein
           [Arabidopsis thaliana]
          Length = 301

 Score =  322 bits (826), Expect = 1e-85
 Identities = 163/240 (67%), Positives = 188/240 (78%), Gaps = 4/240 (1%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSS--SSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXX 231
           ATG +SC+Y+YDSS  S+    E+   G MPA+    L+KLE+FV +DE ++ EE +   
Sbjct: 61  ATGYSSCDYIYDSSLTSNHGNFESNGTG-MPAIFGSLLKKLEEFVTKDEELSKEEVSEDR 119

Query: 232 XXXXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 411
                         CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MV
Sbjct: 120 IPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMV 179

Query: 412 PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 591
           PIDSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SR F+QLPKP+G
Sbjct: 180 PIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIG 239

Query: 592 VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTP 768
           VDFRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   + +S SD+KRK P
Sbjct: 240 VDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDDASSASDKKRKAP 299


>gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Mimulus guttatus]
          Length = 295

 Score =  320 bits (820), Expect = 6e-85
 Identities = 162/239 (67%), Positives = 182/239 (76%), Gaps = 3/239 (1%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC+YV+DSS + +  +  E+          L+KLE+FV +DE +  E++      
Sbjct: 63  ATGHNSCDYVFDSSVAQSQNQRAEH---------LLQKLEEFVDKDESLCREESVDGQGF 113

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSGPLHP PRILCL GSPDGP QYVA+MN+IFSAQRSMVPID
Sbjct: 114 SLLSGSLSMALCYIQRVFRSGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPID 173

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           +C+IG QHSAFLQQASYITGGVYLK Q LDGLFQYLSTVFATDL SR+FLQLPKP GVDF
Sbjct: 174 ACVIGTQHSAFLQQASYITGGVYLKPQLLDGLFQYLSTVFATDLHSRAFLQLPKPAGVDF 233

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTST---SDRKRKTP 768
           RASCFCHK TIDMGYICSVCLSIFCKH K CSTCGSVFGQA  + +ST    + KRKTP
Sbjct: 234 RASCFCHKNTIDMGYICSVCLSIFCKHQKKCSTCGSVFGQAQAQDSSTPPNPNPKRKTP 292


>ref|XP_006472763.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X2 [Citrus sinensis]
          Length = 293

 Score =  319 bits (818), Expect = 1e-84
 Identities = 161/240 (67%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC+YVYDSSS+    +++ NGRMP+LC+  L+ LE+F+ +DE++ +++       
Sbjct: 61  ATGYNSCDYVYDSSSTGN--QSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIAC 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQRVFRSG LHPQPR     GSPDGPEQYVA+MNAIFSAQRSMVPID
Sbjct: 119 SLLSGSLSMALCYIQRVFRSGLLHPQPR-----GSPDGPEQYVAIMNAIFSAQRSMVPID 173

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC +GAQ+SAFLQQASYITGGV+ K QQLDGLFQYL T+F TDL SR+FLQLPKPVGVDF
Sbjct: 174 SCYLGAQNSAFLQQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLPKPVGVDF 233

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQA--PPEVTSTSDRKRKTPEA 774
           RASCFCHK TIDMGYICSVCLSI+CKH K CSTCGSVFGQA    +  S ++RKRKT +A
Sbjct: 234 RASCFCHKNTIDMGYICSVCLSIYCKHLKKCSTCGSVFGQAQTQSDEPSATNRKRKTTDA 293


>ref|XP_004500559.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X2 [Cicer arietinum]
          Length = 294

 Score =  319 bits (817), Expect = 1e-84
 Identities = 154/234 (65%), Positives = 177/234 (75%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC Y+YDS+S+     T  NG MPAL S  L  LE+F+ RD+++           
Sbjct: 61  ATGCNSCGYIYDSTSNRNHAST--NGTMPALYSNLLHNLEEFLARDQKLTMPHAPVTVPS 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQR FRSGP+HPQPRILCLQGS DGPEQYVA+MNAIFSAQRS VP+D
Sbjct: 119 SLLSGSLSMALCYIQRAFRSGPMHPQPRILCLQGSTDGPEQYVAIMNAIFSAQRSSVPVD 178

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC IG+ +SAFLQQASYITGG+Y +  Q+DGLFQYLSTVFATDL SR+FL+LPK +GVDF
Sbjct: 179 SCYIGSNNSAFLQQASYITGGIYYRPPQMDGLFQYLSTVFATDLHSRAFLRLPKSLGVDF 238

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 762
           RASCFCHK+TIDMGY+CSVCLSIFC+HH  CSTC SVFGQA   V S  +RKRK
Sbjct: 239 RASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCSSVFGQAQSNVASADNRKRK 292


>ref|XP_006305456.1| hypothetical protein CARUB_v10009867mg [Capsella rubella]
           gi|482574167|gb|EOA38354.1| hypothetical protein
           CARUB_v10009867mg [Capsella rubella]
          Length = 301

 Score =  319 bits (817), Expect = 1e-84
 Identities = 163/241 (67%), Positives = 185/241 (76%), Gaps = 4/241 (1%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSS--SSPATIETLENGRMPALCSKTLEKLEDFVMRDERMN-EEKTXXX 231
           ATG +SC Y+YDSS  S+  + E    G MP L +  L KLEDFV +DE ++ EE     
Sbjct: 61  ATGYSSCEYIYDSSLTSNHGSFERDRTG-MPPLFASLLNKLEDFVTKDEELSREEGNEDR 119

Query: 232 XXXXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 411
                         CYIQRVFRSG LHPQPRILCLQGSPDGPEQYVAVMN+IFSAQR MV
Sbjct: 120 TPSCLLSGSLSMALCYIQRVFRSGHLHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRLMV 179

Query: 412 PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 591
           PIDSC IG Q+SAFLQQASYITGGV+   +QLDGLFQYL+T+FATDL SR F+QLPKP+G
Sbjct: 180 PIDSCYIGVQNSAFLQQASYITGGVHHTPKQLDGLFQYLTTIFATDLHSRGFVQLPKPIG 239

Query: 592 VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAP-PEVTSTSDRKRKTP 768
           VDFRASCFCHKKTIDMGYICSVCLSIFC+HHK CSTCGSVFGQ+   E +S SD+K+K  
Sbjct: 240 VDFRASCFCHKKTIDMGYICSVCLSIFCEHHKKCSTCGSVFGQSKLDESSSVSDKKKKAS 299

Query: 769 E 771
           +
Sbjct: 300 Q 300


>ref|XP_007137405.1| hypothetical protein PHAVU_009G124300g [Phaseolus vulgaris]
           gi|561010492|gb|ESW09399.1| hypothetical protein
           PHAVU_009G124300g [Phaseolus vulgaris]
          Length = 292

 Score =  305 bits (780), Expect = 3e-80
 Identities = 153/234 (65%), Positives = 175/234 (74%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC YVYDS+S      T   G MPAL S  L  L +F+ RD+++           
Sbjct: 61  ATGCNSCAYVYDSTSERNHGST--TGTMPALYSNLLHNLHEFLARDKQLEASHKPGTVPS 118

Query: 241 XXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPID 420
                      CYIQR FRSGP+ PQPRILCLQG+ DGPEQYVA+MNAIFSAQRS VPID
Sbjct: 119 SLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGTADGPEQYVAIMNAIFSAQRSTVPID 178

Query: 421 SCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGVDF 600
           SC IG+ +SAFLQQASYITGG+Y K  QLDGL+QYLSTVFATDL SR+FL+LPK VGVDF
Sbjct: 179 SCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDF 238

Query: 601 RASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 762
           RASCFCHK+TIDMG++CSVCLSIFC+HH  CSTCGSVFGQA  +  S ++RKRK
Sbjct: 239 RASCFCHKQTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAKVD-ASEANRKRK 291


>ref|XP_003523449.1| PREDICTED: general transcription factor IIH subunit 3-like isoform
           X1 [Glycine max]
          Length = 294

 Score =  303 bits (776), Expect = 8e-80
 Identities = 153/236 (64%), Positives = 177/236 (75%), Gaps = 2/236 (0%)
 Frame = +1

Query: 61  ATGLNSCNYVYDSSSSPATIETLENGRMPALCSKTLEKLEDFVMRDERMNEEKTXXXXXX 240
           ATG NSC YVYDS+S      T   G MPAL S  L  L++F+ RD +++ + +      
Sbjct: 61  ATGCNSCGYVYDSTSDKNHGST--TGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIV 118

Query: 241 XXXXXXXXXXX--CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVP 414
                        CYIQR FRSGP+ PQPRILCLQG+ DGPEQYVA+MNAIFSAQ S VP
Sbjct: 119 PSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVP 178

Query: 415 IDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVGV 594
           IDSC IG+ +SAFLQQASYITGG+Y K  QLDGL+QYLSTVFATDL SR+FL+LPK VGV
Sbjct: 179 IDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGV 238

Query: 595 DFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 762
           DFRASCFCHK+TIDMGY+CSVCLSIFC+HH  CSTCGSVFGQA  +  S +DR+RK
Sbjct: 239 DFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLD-ASAADRQRK 293


>gb|ADE77788.1| unknown [Picea sitchensis]
          Length = 306

 Score =  301 bits (771), Expect = 3e-79
 Identities = 147/237 (62%), Positives = 176/237 (74%), Gaps = 4/237 (1%)
 Frame = +1

Query: 64  TGLNSCNYVYDSSSSPATIETLENGRMPA--LCSKTL--EKLEDFVMRDERMNEEKTXXX 231
           TG NSC ++YDSS++ +  +  ++ +     L   T+  ++LEDFV RD+ +N       
Sbjct: 74  TGTNSCEFIYDSSTTNSEYKKSKDTKCSQEFLTPSTIIVQQLEDFVRRDQALNTNNNATK 133

Query: 232 XXXXXXXXXXXXXXCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 411
                         CYIQR+ R GP HPQPRILCLQGSPDGP+QYVA+MNAIFSAQRSMV
Sbjct: 134 NIHSLLSGSLSMALCYIQRIIRGGPSHPQPRILCLQGSPDGPQQYVAIMNAIFSAQRSMV 193

Query: 412 PIDSCIIGAQHSAFLQQASYITGGVYLKAQQLDGLFQYLSTVFATDLQSRSFLQLPKPVG 591
           P+DSCI+G+QHSAFLQQAS+ITGG+YLK QQL+GLFQ+L+ VFATDL SR FLQLP+P G
Sbjct: 194 PVDSCIVGSQHSAFLQQASHITGGIYLKPQQLEGLFQFLAMVFATDLHSRRFLQLPRPTG 253

Query: 592 VDFRASCFCHKKTIDMGYICSVCLSIFCKHHKTCSTCGSVFGQAPPEVTSTSDRKRK 762
           VDFRASCFCHKKTIDMGY+CSVCLSIFC+H K CSTC S F Q PP     S +KRK
Sbjct: 254 VDFRASCFCHKKTIDMGYVCSVCLSIFCEHSKKCSTCESTFNQKPP-----SGQKRK 305