BLASTX nr result
ID: Akebia24_contig00025921
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00025921
(757 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9... 159 1e-36
ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s... 157 4e-36
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera] 154 3e-35
ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III s... 147 5e-33
ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citr... 147 5e-33
gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Mor... 144 3e-32
ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Popu... 142 2e-31
gb|AFK37258.1| unknown [Lotus japonicus] 140 4e-31
gb|AFK40316.1| unknown [Lotus japonicus] 138 2e-30
ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phas... 135 1e-29
dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana] 134 3e-29
ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidop... 134 3e-29
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s... 134 3e-29
ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III s... 133 6e-29
ref|XP_002525535.1| conserved hypothetical protein [Ricinus comm... 131 2e-28
ref|XP_006404979.1| hypothetical protein EUTSA_v10000370mg [Eutr... 130 4e-28
ref|XP_006394332.1| hypothetical protein EUTSA_v10005100mg [Eutr... 130 5e-28
ref|XP_006590267.1| PREDICTED: uncharacterized protein LOC100526... 129 8e-28
ref|NP_001238744.1| uncharacterized protein LOC100526847 [Glycin... 129 8e-28
ref|NP_683602.1| RNA polymerase II, Rpb4, core protein [Arabidop... 128 2e-27
>ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9 [Theobroma cacao]
gi|508713887|gb|EOY05784.1| DNA-directed RNA polymerase
III subunit RPC9 [Theobroma cacao]
Length = 245
Score = 159 bits (402), Expect = 1e-36
Identities = 83/140 (59%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFLRSRGAS DPTRVI ++PSEF+VYDYLV+SAACNQT+E IN+FL
Sbjct: 80 EANAGALTNFEVLDFLRSRGASKDPTRVIVPIAPSEFKVYDYLVESAACNQTKEHINDFL 139
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
RC Y LAKAE LNIIN+RPS+LVEIDPIIE+ +KR K
Sbjct: 140 ERCKNYKLAKAEVLNIINLRPSALVEIDPIIEQSEKRFGKQLEELVNLVVEVLPEPPTQK 199
Query: 226 PGET-DEEDNEEAPDQEPME 170
E + ED EE D++ M+
Sbjct: 200 NAEQGNSEDKEETIDRKDMD 219
>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
product [Vitis vinifera]
Length = 156
Score = 157 bits (397), Expect = 4e-36
Identities = 78/98 (79%), Positives = 89/98 (90%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFLRSRGA+ DPTRVIA ++ SEF+VYDYLV+SAACNQTRESINE L
Sbjct: 5 KANAGALTNFEVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVESAACNQTRESINELL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRM 293
+C KY+LAKAE LNIINIRP+S VEIDPIIEE +KRM
Sbjct: 65 EKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRM 102
>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
Length = 388
Score = 154 bits (389), Expect = 3e-35
Identities = 77/98 (78%), Positives = 88/98 (89%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFLRSRGA+ D TRVIA ++ SEF+VYDYLV+SAACNQTRESINE L
Sbjct: 26 KANAGALTNFEVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVESAACNQTRESINELL 85
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRM 293
+C KY+LAKAE LNIINIRP+S VEIDPIIEE +KRM
Sbjct: 86 EKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRM 123
>ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
isoform X1 [Citrus sinensis]
gi|568872598|ref|XP_006489454.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC9-like isoform X2 [Citrus
sinensis]
Length = 165
Score = 147 bits (370), Expect = 5e-33
Identities = 82/156 (52%), Positives = 97/156 (62%), Gaps = 18/156 (11%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAG LTNFE+ DFLR +GAS DPTRV+ V+PSEF+VYDYLV+SAACNQTR INEFL
Sbjct: 5 EANAGPLTNFEVFDFLRCKGASKDPTRVLVPVTPSEFKVYDYLVESAACNQTRNIINEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
+ K+ LAKAE LNIINIRPSSLVE+D IIE+CD R + P +
Sbjct: 65 EKSKKFKLAKAEILNIINIRPSSLVEVDSIIEQCDTRFQEEELQELVDLVIEVLPPLPNQ 124
Query: 226 PGETDE--ED----------------NEEAPDQEPM 173
P +E ED N+E D EPM
Sbjct: 125 PNAAEEVNEDVQGATERMDGEGIKGVNDEKADDEPM 160
>ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citrus clementina]
gi|567853814|ref|XP_006420027.1| hypothetical protein
CICLE_v10006087mg [Citrus clementina]
gi|557521899|gb|ESR33266.1| hypothetical protein
CICLE_v10006087mg [Citrus clementina]
gi|557521900|gb|ESR33267.1| hypothetical protein
CICLE_v10006087mg [Citrus clementina]
Length = 163
Score = 147 bits (370), Expect = 5e-33
Identities = 71/99 (71%), Positives = 83/99 (83%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ NAG LTNFE+ DFLRS+GAS DPTRV+ V+PSEF+VYDYLV+SAACNQTR INEFL
Sbjct: 5 EVNAGPLTNFEVFDFLRSKGASKDPTRVLVPVTPSEFKVYDYLVESAACNQTRNIINEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMR 290
+ K+ LAKAE LNIINIRPSSLVE+D IIE+CD R +
Sbjct: 65 EKSKKFKLAKAEILNIINIRPSSLVEVDSIIEQCDTRFQ 103
>gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Morus notabilis]
Length = 163
Score = 144 bits (363), Expect = 3e-32
Identities = 80/160 (50%), Positives = 107/160 (66%), Gaps = 19/160 (11%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGAL NFE+L+FL+S+GAS DPTRV+A V+PSE++VYDYLV++AAC+QT+E++NEFL
Sbjct: 5 EANAGALANFEVLNFLKSKGASKDPTRVLADVAPSEYKVYDYLVETAACDQTKENVNEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
+C KY+LAKAE LNIINIR S+ VEI I+E+C+KR+ PT+
Sbjct: 65 EKCKKYDLAKAEVLNIINIRASTAVEIYLIVEDCEKRL-GDDVDELVKTVAEVLPPAPTE 123
Query: 226 P------GETDE-------------EDNEEAPDQEPMEAN 164
P E DE E E+APD+EP+E +
Sbjct: 124 PASEEVNNEADEKTADQNINEQLVGEGPEKAPDKEPIETS 163
>ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Populus trichocarpa]
gi|222855719|gb|EEE93266.1| hypothetical protein
POPTR_0005s06860g [Populus trichocarpa]
Length = 159
Score = 142 bits (357), Expect = 2e-31
Identities = 80/150 (53%), Positives = 94/150 (62%), Gaps = 15/150 (10%)
Frame = -1
Query: 580 NAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFLTR 401
NAGALTNFE+LDFLRSRGAS D +RV+A V+ SE++VYDYLV++ ACN TRE INEFL R
Sbjct: 7 NAGALTNFEVLDFLRSRGASRDVSRVLAPVAASEYKVYDYLVETPACNLTREKINEFLER 66
Query: 400 CGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTKP- 224
C KY+LAKAE LNIINIRPS VEI IIEE D R P +P
Sbjct: 67 CKKYDLAKAELLNIINIRPSQTVEIYTIIEEMDSRFEMPIIEELVELVEEVLPPPPGQPK 126
Query: 223 --------------GETDEEDNEEAPDQEP 176
GE D ++NE A ++EP
Sbjct: 127 AEGGTDENEEETGEGEEDNDENEAADEEEP 156
>gb|AFK37258.1| unknown [Lotus japonicus]
Length = 162
Score = 140 bits (354), Expect = 4e-31
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFLR +GAS DPTRVIA+V+ SE++VYDYLV +AA NQTRESINEF+
Sbjct: 5 EANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFM 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
K++LAKAE LNIINIRP++ VE+ PIIEEC+ R
Sbjct: 65 ASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECESR 101
>gb|AFK40316.1| unknown [Lotus japonicus]
Length = 162
Score = 138 bits (347), Expect = 2e-30
Identities = 68/97 (70%), Positives = 83/97 (85%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFLR +GAS DPTRVIA+V+ SE++VYDYLV +AA NQTRESINEF+
Sbjct: 5 EANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFM 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
K++LAKAE LNIINI P++ VE+ PIIEEC+ R
Sbjct: 65 ASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECEPR 101
>ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phaseolus vulgaris]
gi|561036857|gb|ESW35387.1| hypothetical protein
PHAVU_001G230900g [Phaseolus vulgaris]
Length = 154
Score = 135 bits (341), Expect = 1e-29
Identities = 68/97 (70%), Positives = 83/97 (85%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFLR++GAS DPTRVIA+V SE++VYDYLV +AA +QTRESINEFL
Sbjct: 5 EANAGALTNFEVLDFLRAKGASKDPTRVIAKVEQSEYKVYDYLVDTAASDQTRESINEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
T +++LAKAE LNI+N RP+S VEI PIIE C+ R
Sbjct: 65 TCIKRHDLAKAEVLNILNTRPTSEVEIFPIIESCEGR 101
>dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana]
Length = 166
Score = 134 bits (338), Expect = 3e-29
Identities = 71/130 (54%), Positives = 87/130 (66%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFL SRGAS D TRVIA ++ SE++VYDYLV++AA QTRESIN+F
Sbjct: 32 KANAGALTNFEVLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESINKFA 91
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
+C + LAKAE LNIIN+RPSS+VE+ PIIE D R
Sbjct: 92 DKCKDFKLAKAEILNIINLRPSSIVELLPIIENLDDREIDTDGILELVKDLLPPLPTTAS 151
Query: 226 PGETDEEDNE 197
P + DEE+ E
Sbjct: 152 PKDDDEEETE 161
>ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|334188590|ref|NP_001190602.1| RNA polymerase II,
Rpb4, core protein [Arabidopsis thaliana]
gi|32815911|gb|AAP88340.1| At5g62950 [Arabidopsis
thaliana] gi|110743157|dbj|BAE99470.1| hypothetical
protein [Arabidopsis thaliana]
gi|332010294|gb|AED97677.1| RNA polymerase II, Rpb4,
core protein [Arabidopsis thaliana]
gi|332010296|gb|AED97679.1| RNA polymerase II, Rpb4,
core protein [Arabidopsis thaliana]
Length = 139
Score = 134 bits (338), Expect = 3e-29
Identities = 71/130 (54%), Positives = 87/130 (66%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFL SRGAS D TRVIA ++ SE++VYDYLV++AA QTRESIN+F
Sbjct: 5 KANAGALTNFEVLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESINKFA 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
+C + LAKAE LNIIN+RPSS+VE+ PIIE D R
Sbjct: 65 DKCKDFKLAKAEILNIINLRPSSIVELLPIIENLDDREIDTDGILELVKDLLPPLPTTAS 124
Query: 226 PGETDEEDNE 197
P + DEE+ E
Sbjct: 125 PKDDDEEETE 134
>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
[Glycine max]
Length = 161
Score = 134 bits (337), Expect = 3e-29
Identities = 66/97 (68%), Positives = 84/97 (86%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ NAGALTNFE+LDFLR++GAS DPTRVIA+V+ SE++VYDYLV +AA QTRESINEFL
Sbjct: 5 ECNAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVDTAASVQTRESINEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
T +++LAKAE LNI+NI P++ VE+ PIIE+CD+R
Sbjct: 65 TSVKQHDLAKAEVLNILNIGPAAEVELYPIIEDCDER 101
>ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
[Cucumis sativus] gi|449523065|ref|XP_004168545.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc9-like [Cucumis sativus]
Length = 160
Score = 133 bits (335), Expect = 6e-29
Identities = 63/98 (64%), Positives = 83/98 (84%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAG LTNFE+LDFLRS+GA+ DPTRV+A+V PSE++V+DYL Q++ACNQTRE+I F
Sbjct: 5 EANAGPLTNFEVLDFLRSKGAAKDPTRVLAKVLPSEYKVFDYLNQTSACNQTREAIINFA 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRM 293
+ +Y+LAKAE LNIIN+RP++ VE+ P+IE CD RM
Sbjct: 65 EKSKEYDLAKAEILNIINLRPTTPVELFPVIENCDARM 102
>ref|XP_002525535.1| conserved hypothetical protein [Ricinus communis]
gi|223535214|gb|EEF36893.1| conserved hypothetical
protein [Ricinus communis]
Length = 138
Score = 131 bits (330), Expect = 2e-28
Identities = 63/95 (66%), Positives = 78/95 (82%)
Frame = -1
Query: 580 NAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFLTR 401
NAGALTNFE+LDFL++RGA D +RVIA V+PSE++VYDYL+++ AC QTRE INEF+ +
Sbjct: 7 NAGALTNFEVLDFLKARGAGKDSSRVIAPVAPSEYKVYDYLMETPACRQTREQINEFMEK 66
Query: 400 CGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
C Y LAKAE LNIINI P LVE+DPIIE+ + R
Sbjct: 67 CKAYKLAKAEILNIINIVPRELVELDPIIEKSEVR 101
>ref|XP_006404979.1| hypothetical protein EUTSA_v10000370mg [Eutrema salsugineum]
gi|557106107|gb|ESQ46432.1| hypothetical protein
EUTSA_v10000370mg [Eutrema salsugineum]
Length = 139
Score = 130 bits (328), Expect = 4e-28
Identities = 70/130 (53%), Positives = 88/130 (67%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFL SRGAS D TRVIA ++ SE++VYDYLV++AA QTRESIN F
Sbjct: 5 KANAGALTNFEVLDFLNSRGASKDITRVIAPIAKSEYKVYDYLVETAAFTQTRESINRFS 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
+C + +AKAE LNIIN+RPSS+VE+ PIIE+ D R +
Sbjct: 65 EKCRDFKVAKAEILNIINLRPSSIVELMPIIEKPDDREINSDGILELVQDLLPPLPTSES 124
Query: 226 PGETDEEDNE 197
ETD+E+ E
Sbjct: 125 HKETDQEEKE 134
>ref|XP_006394332.1| hypothetical protein EUTSA_v10005100mg [Eutrema salsugineum]
gi|557090971|gb|ESQ31618.1| hypothetical protein
EUTSA_v10005100mg [Eutrema salsugineum]
Length = 140
Score = 130 bits (327), Expect = 5e-28
Identities = 69/129 (53%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = -1
Query: 580 NAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFLTR 401
NAG LTNFE+LDFL SRGAS D TRVIA ++ SE++VYDYLV++AAC QTRES+NEF +
Sbjct: 7 NAGTLTNFEVLDFLNSRGASRDTTRVIAPIAKSEYKVYDYLVETAACTQTRESVNEFADK 66
Query: 400 CGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR-MRSXXXXXXXXXXXXXXXXXPTKP 224
C + + KAE LNIIN+RPSS+VE+ PIIE D R + S T
Sbjct: 67 CKAFKVWKAEILNIINLRPSSIVELMPIIETPDNREIDSDGILELVQDLLPPLPSLETPK 126
Query: 223 GETDEEDNE 197
G +EE+ E
Sbjct: 127 GNNEEEETE 135
>ref|XP_006590267.1| PREDICTED: uncharacterized protein LOC100526847 isoform X1 [Glycine
max]
Length = 161
Score = 129 bits (325), Expect = 8e-28
Identities = 65/97 (67%), Positives = 82/97 (84%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ NAGALTNFE+LDFLR++GAS DPTRVIA+VS SE++VYDYLV +AA QTRESINEFL
Sbjct: 5 EGNAGALTNFEVLDFLRAKGASKDPTRVIAKVSQSEYKVYDYLVDTAASVQTRESINEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
+++LAKAE LNI+NI P++ VE+ PI+EE D+R
Sbjct: 65 RSVKQHDLAKAEVLNILNIGPAAEVELYPILEESDER 101
>ref|NP_001238744.1| uncharacterized protein LOC100526847 [Glycine max]
gi|255630978|gb|ACU15853.1| unknown [Glycine max]
Length = 161
Score = 129 bits (325), Expect = 8e-28
Identities = 65/97 (67%), Positives = 82/97 (84%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ NAGALTNFE+LDFLR++GAS DPTRVIA+VS SE++VYDYLV +AA QTRESINEFL
Sbjct: 5 EGNAGALTNFEVLDFLRAKGASKDPTRVIAKVSQSEYKVYDYLVDTAASVQTRESINEFL 64
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKR 296
+++LAKAE LNI+NI P++ VE+ PI+EE D+R
Sbjct: 65 RSVKQHDLAKAEVLNILNIGPAAEVELYPILEESDER 101
>ref|NP_683602.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|332643992|gb|AEE77513.1| RNA polymerase II, Rpb4,
core protein [Arabidopsis thaliana]
Length = 137
Score = 128 bits (322), Expect = 2e-27
Identities = 69/135 (51%), Positives = 87/135 (64%)
Frame = -1
Query: 586 QANAGALTNFEILDFLRSRGASTDPTRVIAQVSPSEFQVYDYLVQSAACNQTRESINEFL 407
+ANAGALTNFE+LDFL SRGAS D TRVIA ++ SE++VYDYLV++AA QTRES+N+
Sbjct: 2 KANAGALTNFELLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESVNKSA 61
Query: 406 TRCGKYNLAKAEKLNIINIRPSSLVEIDPIIEECDKRMRSXXXXXXXXXXXXXXXXXPTK 227
+C + LAKAE LNIIN+ PSS+VE+ PIIE D R
Sbjct: 62 DKCKDFKLAKAEILNIINLWPSSIVELLPIIENLDDREIDTDGILELVKDLLPPLPTAES 121
Query: 226 PGETDEEDNEEAPDQ 182
P + DEE+ E +Q
Sbjct: 122 PKDNDEEEETENGEQ 136