BLASTX nr result
ID: Akebia24_contig00025815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00025815
(550 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr... 123 3e-26
ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi... 122 6e-26
emb|CBI29222.3| unnamed protein product [Vitis vinifera] 122 6e-26
ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prun... 114 2e-23
ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily pr... 109 4e-22
ref|XP_002303480.2| pentatricopeptide repeat-containing family p... 105 7e-21
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss... 97 3e-18
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containi... 96 8e-18
ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutr... 94 2e-17
ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Caps... 93 5e-17
ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arab... 90 3e-16
sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-c... 90 3e-16
emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|72687... 90 3e-16
ref|NP_567587.1| pentatricopeptide repeat-containing protein [Ar... 90 3e-16
ref|XP_007156329.1| hypothetical protein PHAVU_003G277400g [Phas... 86 6e-15
ref|XP_003628993.1| Pentatricopeptide repeat-containing protein ... 84 2e-14
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
gi|568835123|ref|XP_006471629.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568835125|ref|XP_006471630.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557534991|gb|ESR46109.1| hypothetical protein
CICLE_v10000274mg [Citrus clementina]
Length = 833
Score = 123 bits (308), Expect = 3e-26
Identities = 72/140 (51%), Positives = 90/140 (64%), Gaps = 11/140 (7%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQQ-----------PQSPNDHDRSVLNK 309
MD RR+++ K L ++ +RPL+ T TAQQQ P P ++S+L
Sbjct: 1 MDLRRLSI---PKPCSLSIAVSRPLTHVTSTAQQQQELHNRNQQQQPPPPQSSNQSLLKW 57
Query: 310 VISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTV 489
V S+LS SLD SKC+ L +LSP F LFF IRS++NPKT L FF FAS+S FRFTV
Sbjct: 58 VSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKTALKFFYFASQSCNFRFTV 117
Query: 490 GSYCLLIRLLIKSNLVSPAR 549
SYCLLIRLL+ SNL+SPAR
Sbjct: 118 RSYCLLIRLLLFSNLLSPAR 137
>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 122 bits (306), Expect = 6e-26
Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQ------SPNDHDRSVLNKVISIL 324
MD R + L K TP+F RPL+C T A P P D ++L V SIL
Sbjct: 68 MDLR---ITLLPKPTPIFCPIARPLTCVTSAAPHPPSPLPSQNQPPSSDHALLKSVTSIL 124
Query: 325 STTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYCL 504
S SLD ++C++ + LSPH F +FF +R ++NPKT LNFF FAS+S GFRFT+ SYC+
Sbjct: 125 SNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCV 184
Query: 505 LIRLLIKSNLVSPAR 549
L+R LI S VSPAR
Sbjct: 185 LMRSLIVSGFVSPAR 199
>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 122 bits (306), Expect = 6e-26
Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQ------SPNDHDRSVLNKVISIL 324
MD R + L K TP+F RPL+C T A P P D ++L V SIL
Sbjct: 1 MDLR---ITLLPKPTPIFCPIARPLTCVTSAAPHPPSPLPSQNQPPSSDHALLKSVTSIL 57
Query: 325 STTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYCL 504
S SLD ++C++ + LSPH F +FF +R ++NPKT LNFF FAS+S GFRFT+ SYC+
Sbjct: 58 SNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCV 117
Query: 505 LIRLLIKSNLVSPAR 549
L+R LI S VSPAR
Sbjct: 118 LMRSLIVSGFVSPAR 132
>ref|XP_007217153.1| hypothetical protein PRUPE_ppa001463mg [Prunus persica]
gi|462413303|gb|EMJ18352.1| hypothetical protein
PRUPE_ppa001463mg [Prunus persica]
Length = 821
Score = 114 bits (285), Expect = 2e-23
Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 11/140 (7%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQ-----------QQPQSPNDHDRSVLNK 309
MD RR+++ +K T LF RPL+C T Q Q P+ P ++S+ N
Sbjct: 1 MDLRRLSI---SKPTLLF-RINRPLTCVTCNLQRPKEPPQPPPLQVPKEPQPPNQSLHNW 56
Query: 310 VISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTV 489
V SILS SLD SKC+ + LS H F R+F I S++NPKT L+FF FASES F+FTV
Sbjct: 57 VSSILSKPSLDSSKCKALIPLLSSHEFDRVFCSISSNVNPKTALHFFYFASESFKFQFTV 116
Query: 490 GSYCLLIRLLIKSNLVSPAR 549
S+C+L+RLLI SNLVSPAR
Sbjct: 117 RSFCVLVRLLILSNLVSPAR 136
>ref|XP_007040906.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590680604|ref|XP_007040907.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590680608|ref|XP_007040908.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|590680612|ref|XP_007040909.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590680616|ref|XP_007040910.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|590680620|ref|XP_007040911.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778151|gb|EOY25407.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778152|gb|EOY25408.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778153|gb|EOY25409.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778154|gb|EOY25410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778155|gb|EOY25411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778156|gb|EOY25412.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 845
Score = 109 bits (273), Expect = 4e-22
Identities = 67/153 (43%), Positives = 88/153 (57%), Gaps = 24/153 (15%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTT-----------FTAQQQPQSP---------- 279
MD RR+A+ K ++ TRPL+C T F QQQPQ P
Sbjct: 1 MDLRRLAV---NKPIYIYTPITRPLTCVTSTTSAAAAAQQFNPQQQPQPPLNLTDSDSSN 57
Query: 280 ---NDHDRSVLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFF 450
N++++ +L ++ ILS +SLD SKC++ L LSP F R F I S LNPKTTL+FF
Sbjct: 58 DSNNNNNQGLLGRLSCILSKSSLDSSKCKQLLPLLSPLDFDRFFSAISSHLNPKTTLHFF 117
Query: 451 SFASESLGFRFTVGSYCLLIRLLIKSNLVSPAR 549
AS+S FRFT+ SYC+LI LL+ +N SPAR
Sbjct: 118 YLASQSFNFRFTLRSYCILILLLLLANHSSPAR 150
>ref|XP_002303480.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342907|gb|EEE78459.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 842
Score = 105 bits (262), Expect = 7e-21
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 18/147 (12%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLS--FTRPLSCTTFTAQQQPQ----------------SPNDH 288
MD RR+ + TK P+F+ RPL+C T T Q+Q Q +P
Sbjct: 5 MDMRRLTI---TK--PIFIQSPLKRPLTCITTTLQKQHQIHPQAPPPPPLLQTQTNPQAL 59
Query: 289 DRSVLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASES 468
++S+L +V ILS SLD +KC+E + LSP F F ++S++NPKT LNFF F SE+
Sbjct: 60 NQSLLKRVSLILSNPSLDCAKCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSET 119
Query: 469 LGFRFTVGSYCLLIRLLIKSNLVSPAR 549
FRFT SYC+LI LL+ ++L+SPAR
Sbjct: 120 CKFRFTARSYCVLIHLLVGNDLLSPAR 146
>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 846
Score = 97.1 bits (240), Expect = 3e-18
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 12/141 (8%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTA------------QQQPQSPNDHDRSVLN 306
MD RR+A ++K ++ TRPL+C T ++ Q+QP SP ++S+L+
Sbjct: 24 MDVRRLAAVIKP--IYIYTPITRPLTCATSSSPIPSPAAPQIDPQRQPSSPPPVNQSLLD 81
Query: 307 KVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFT 486
+ SILS SLD SK ++ L LSP F R F + +PKTTLNFF AS FRFT
Sbjct: 82 TLSSILSKPSLDSSKSKQLLPLLSPSDFDRFFIALSPRADPKTTLNFFHLASRCFNFRFT 141
Query: 487 VGSYCLLIRLLIKSNLVSPAR 549
+ SY +LI LL+ SN S AR
Sbjct: 142 LRSYYILILLLLLSNNSSAAR 162
>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 97.1 bits (240), Expect = 3e-18
Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +1
Query: 196 TKRTPLFLSFTRPLSCTTFTA--QQQPQSPNDHDRSVLNK-VISILSTTSLDHSKCRETL 366
+K TP+ F+R L C + T ++ Q P + L+ V S+LS +SLD SKC L
Sbjct: 9 SKTTPVLFPFSRRLVCVSSTQPHKEHHQDPPWQSQDQLHLWVSSVLSHSSLDSSKCSALL 68
Query: 367 IDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYCLLIRLLIKSNLVSPA 546
LSP F +LFF I NP T LNFF FAS S FRFT+ SYC LI LLI+S + PA
Sbjct: 69 PHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPA 128
Query: 547 R 549
R
Sbjct: 129 R 129
>ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 840
Score = 95.5 bits (236), Expect = 8e-18
Identities = 59/144 (40%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQ---------------QPQSPNDHDRS 297
MDF R L T + P FTRPL+ T TA + P P
Sbjct: 5 MDFAR----LNTPKPPPI--FTRPLTWVTSTALRLHRRQLSPPPPPPLPPPSPPPPPPHP 58
Query: 298 VLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGF 477
L+ + SIL++ +LD SKC+ L L+PHHF RLF + ++NPKTT FF FA+ F
Sbjct: 59 SLSSIPSILTSKTLDSSKCKSILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNF 118
Query: 478 RFTVGSYCLLIRLLIKSNLVSPAR 549
RFTV SYCLL+R L+ + V AR
Sbjct: 119 RFTVRSYCLLLRSLLADSFVPRAR 142
>ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutrema salsugineum]
gi|557115148|gb|ESQ55431.1| hypothetical protein
EUTSA_v10024401mg [Eutrema salsugineum]
Length = 837
Score = 94.0 bits (232), Expect = 2e-17
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Frame = +1
Query: 163 MDFRRIALL--LKTKRTPLFLSFTRPLSCTTFTAQQQPQSP--NDHDRSVLNKVISILST 330
MD R+++ L T+R +++ R TT QQ +S + DR + ++ + LS
Sbjct: 25 MDLRKLSRTSYLFTRRLKS-IAYPRKSFHTTLHLQQLEKSEEASSSDRHLRERLSAALSR 83
Query: 331 TSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYCLLI 510
SLD+ +C++ + LSPH F RLF RS +NPKT L+FF AS+S F F++ SYCLLI
Sbjct: 84 RSLDYEQCKQLIATLSPHEFDRLFPDFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLI 143
Query: 511 RLLIKSNLVSPAR 549
LL+ ++L+SPAR
Sbjct: 144 GLLLDASLLSPAR 156
>ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Capsella rubella]
gi|482551263|gb|EOA15456.1| hypothetical protein
CARUB_v10004123mg [Capsella rubella]
Length = 838
Score = 92.8 bits (229), Expect = 5e-17
Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Frame = +1
Query: 163 MDFRRI--ALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQSPN-----DHDRSVLNKVISI 321
MD RR+ A L T+R L R TT QQ P+ DR + +++ S+
Sbjct: 25 MDLRRLSRASYLFTRR----LKSGRRSLHTTRYLQQYVHPPDKSEEASSDRHLHDRLSSV 80
Query: 322 LSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYC 501
LS SLD+ C++ + LSP F RLF RS +NPKT LNFF AS+S F F++ SYC
Sbjct: 81 LSKRSLDYELCKQLITVLSPLEFDRLFPEFRSKVNPKTALNFFRLASDSFSFSFSLRSYC 140
Query: 502 LLIRLLIKSNLVSPAR 549
LLI LL+ +NL+SPAR
Sbjct: 141 LLIGLLLDANLLSPAR 156
>ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502153968|ref|XP_004509526.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Cicer arietinum]
gi|502153970|ref|XP_004509527.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X3 [Cicer arietinum]
gi|502153972|ref|XP_004509528.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X4 [Cicer arietinum]
gi|502153974|ref|XP_004509529.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X5 [Cicer arietinum]
gi|502153976|ref|XP_004509530.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X6 [Cicer arietinum]
gi|502153978|ref|XP_004509531.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X7 [Cicer arietinum]
gi|502153980|ref|XP_004509532.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X8 [Cicer arietinum]
gi|502153982|ref|XP_004509533.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X9 [Cicer arietinum]
gi|502153984|ref|XP_004509534.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X10 [Cicer arietinum]
Length = 835
Score = 92.0 bits (227), Expect = 9e-17
Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 12/141 (8%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLS-CTTFTAQQQ-----------PQSPNDHDRSVLN 306
MDF + + TK+ P FTRPL+ T+ T + Q P P D ++ L
Sbjct: 5 MDFTKHS----TKKLPPI--FTRPLTWITSNTPRHQRRHFPPPPPPPPHPPPDSNKPPLT 58
Query: 307 KVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFT 486
+ SILS LD SKC+ L L+PH F LFF S++N KTTL+FF FAS F FT
Sbjct: 59 SLPSILSHKILDSSKCKSILPHLTPHQFDTLFFTHHSTVNLKTTLDFFRFASNQFKFCFT 118
Query: 487 VGSYCLLIRLLIKSNLVSPAR 549
V SYCLLIRLL+ SN + AR
Sbjct: 119 VRSYCLLIRLLLCSNHLPRAR 139
>ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata] gi|297313772|gb|EFH44195.1| hypothetical protein
ARALYDRAFT_492917 [Arabidopsis lyrata subsp. lyrata]
Length = 817
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +1
Query: 289 DRSVLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASES 468
DR + ++ S+LS SLD+ +C++ + LSPH F RLF R +NPKT L+FF AS+S
Sbjct: 49 DRHLHERLSSVLSKRSLDYEQCKQLITVLSPHEFDRLFPEFRFKVNPKTALDFFRLASDS 108
Query: 469 LGFRFTVGSYCLLIRLLIKSNLVSPAR 549
F F++ SYCLLI LL+ +NL SPAR
Sbjct: 109 FSFSFSLRSYCLLIGLLLDANLSSPAR 135
>sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 90.1 bits (222), Expect = 3e-16
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Frame = +1
Query: 163 MDFRRI--ALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQSPN-----DHDRSVLNKVISI 321
MD RR+ A L T+R F++ +R T+ QQ P+ DR + ++ S+
Sbjct: 25 MDLRRLSRASYLFTRRLK-FIAKSRKCFHTSRYLQQCVHRPDKSEETSSDRHLHERLSSV 83
Query: 322 LSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYC 501
LS SLD+ +C++ + LSP F RLF RS +NPKT L+FF AS+S F F++ SYC
Sbjct: 84 LSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYC 143
Query: 502 LLIRLLIKSNLVSPAR 549
LLI LL+ +NL+S AR
Sbjct: 144 LLIGLLLDANLLSAAR 159
>emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|7268739|emb|CAB78946.1|
putative protein [Arabidopsis thaliana]
Length = 814
Score = 90.1 bits (222), Expect = 3e-16
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Frame = +1
Query: 163 MDFRRI--ALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQSPN-----DHDRSVLNKVISI 321
MD RR+ A L T+R F++ +R T+ QQ P+ DR + ++ S+
Sbjct: 1 MDLRRLSRASYLFTRRLK-FIAKSRKCFHTSRYLQQCVHRPDKSEETSSDRHLHERLSSV 59
Query: 322 LSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYC 501
LS SLD+ +C++ + LSP F RLF RS +NPKT L+FF AS+S F F++ SYC
Sbjct: 60 LSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYC 119
Query: 502 LLIRLLIKSNLVSPAR 549
LLI LL+ +NL+S AR
Sbjct: 120 LLIGLLLDANLLSAAR 135
>ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis
thaliana] gi|332658782|gb|AEE84182.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 90.1 bits (222), Expect = 3e-16
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 7/136 (5%)
Frame = +1
Query: 163 MDFRRI--ALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQSPN-----DHDRSVLNKVISI 321
MD RR+ A L T+R F++ +R T+ QQ P+ DR + ++ S+
Sbjct: 12 MDLRRLSRASYLFTRRLK-FIAKSRKCFHTSRYLQQCVHRPDKSEETSSDRHLHERLSSV 70
Query: 322 LSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYC 501
LS SLD+ +C++ + LSP F RLF RS +NPKT L+FF AS+S F F++ SYC
Sbjct: 71 LSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYC 130
Query: 502 LLIRLLIKSNLVSPAR 549
LLI LL+ +NL+S AR
Sbjct: 131 LLIGLLLDANLLSAAR 146
>ref|XP_007156329.1| hypothetical protein PHAVU_003G277400g [Phaseolus vulgaris]
gi|561029683|gb|ESW28323.1| hypothetical protein
PHAVU_003G277400g [Phaseolus vulgaris]
Length = 837
Score = 85.9 bits (211), Expect = 6e-15
Identities = 57/146 (39%), Positives = 76/146 (52%), Gaps = 17/146 (11%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQQ-----------------PQSPNDHD 291
MDF R + K P+F TRPL+ T TA + P P +
Sbjct: 5 MDFTRFS---SPKSPPIF---TRPLTWVTSTALRHQRRHLPPPTPPPPPPPHPTPPQTTN 58
Query: 292 RSVLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESL 471
++L + S+L+T LD SKC+ L LSP F RLFF I ++NP TTL+FF A+
Sbjct: 59 HALLTLLPSLLTTGVLDSSKCKSILPHLSPLEFDRLFFPIHHTVNPITTLDFFRLATNRF 118
Query: 472 GFRFTVGSYCLLIRLLIKSNLVSPAR 549
F FT SYCLL+R L+ S+L+ AR
Sbjct: 119 KFPFTFRSYCLLLRSLLASSLLPRAR 144
>ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 819
Score = 84.3 bits (207), Expect = 2e-14
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Frame = +1
Query: 196 TKRTPLFLSFTRPLSCTTFTAQ--------QQPQSPNDHDRSVLNKVISILSTTSLDHSK 351
T + P+ FTR L+ T T Q P P + SIL+ LD SK
Sbjct: 8 TTKPPIL--FTRLLTWITSTLPRYRHIPPPQPPPPPPQPPSPPPTTLPSILAHKVLDSSK 65
Query: 352 CRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASESLGFRFTVGSYCLLIRLLIKSN 531
C+ + +L+PH F FF +++N KTTL+FFSFAS++ FRFTV SYC+LIRLL+ SN
Sbjct: 66 CKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRSYCILIRLLLASN 125
Query: 532 LVSPAR 549
+ A+
Sbjct: 126 HIPRAK 131
>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum tuberosum]
Length = 928
Score = 79.7 bits (195), Expect = 4e-13
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQ----------QPQSPNDH-------- 288
MD RR+ + K +F RPL+C +TA Q PN
Sbjct: 90 MDVRRLKI---PKTIAIFSHIKRPLTCVIYTASSDQISEPLQKAQSNKPNPSSEKKQKNG 146
Query: 289 -DRSVLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASE 465
D ++ V+S+LS +D K ++ L L+P F +F I SSL P L FF AS
Sbjct: 147 LDLNLRKWVVSVLSNPPVDSLKIKDLLTLLTPQQFDAIFLEIYSSLKPLNVLKFFHVASG 206
Query: 466 SLGFRFTVGSYCLLIRLLIKSNLVSPAR 549
+ GF F+V SYC L+RLL+ SN PAR
Sbjct: 207 TCGFSFSVRSYCTLLRLLVASNHDVPAR 234
>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum lycopersicum]
Length = 839
Score = 79.7 bits (195), Expect = 4e-13
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Frame = +1
Query: 163 MDFRRIALLLKTKRTPLFLSFTRPLSCTTFTAQQQPQS----------PNDH-------- 288
MD RR+ + K +F RPL+C +TA S PN
Sbjct: 1 MDVRRLKI---PKTIAIFSHIKRPLTCVIYTASSDQISEPLQKGDSNKPNPSSEKKQIKG 57
Query: 289 -DRSVLNKVISILSTTSLDHSKCRETLIDLSPHHFHRLFFGIRSSLNPKTTLNFFSFASE 465
D ++ V+S+LS +D K ++ L L+P F +F I SSL P L FF AS
Sbjct: 58 LDLNLRKWVVSVLSDPPVDSLKIKDLLTLLNPQQFDAIFLEIHSSLKPLNVLKFFHVASG 117
Query: 466 SLGFRFTVGSYCLLIRLLIKSNLVSPAR 549
+ F FTV SYC L+RLLI SN +PAR
Sbjct: 118 TCSFSFTVRSYCTLVRLLIASNHDAPAR 145