BLASTX nr result

ID: Akebia24_contig00025459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00025459
         (387 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]    63   4e-08
ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Popu...    61   1e-07
ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [A...    55   8e-06

>gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis]
          Length = 667

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
 Frame = +3

Query: 3   ERTINTTLKKPDHSKSRQICFKCGLIGHRMRNCPQEDGYRREKVSQFDRRQDKDV----- 167
           ER  +  LK+P+H K +Q C+ CG +GH+MR+CP++   RR K ++F+R QD D+     
Sbjct: 225 ERDGDRVLKRPNHLKFQQNCYGCGALGHKMRDCPRKHSSRR-KFTRFERSQDDDIEKSRG 283

Query: 168 --SFXXXXXXXXXXXXPTSLEGP----YSSGDPLQRDSKSKENCGYELKRDSRR--KKRL 323
                            T L        S    L+   K+  +   +  R      KKR 
Sbjct: 284 GGELERFRSKSRGNMRSTRLRHKNDKWTSDSGQLRMSMKNGNSSDTDRVRGKEHGVKKRS 343

Query: 324 GREHRSPKKYLGWKAKRSAS 383
            RE RSPK++   K+KR AS
Sbjct: 344 KRETRSPKRHSAKKSKRLAS 363


>ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Populus trichocarpa]
           gi|222854422|gb|EEE91969.1| hypothetical protein
           POPTR_0006s22220g [Populus trichocarpa]
          Length = 693

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 22/145 (15%)
 Frame = +3

Query: 15  NTTLKKPDHSKSRQICFKCGLIGHRMRNCPQEDGYRREKVSQFDRRQDKDVSFXXXXXXX 194
           + TL +    KS++ C+KCG  GH+MRNCPQE+  +R  V++FD R   D+         
Sbjct: 237 DATLNRLSDVKSQETCYKCGGSGHKMRNCPQENASQR-NVTRFDSRHTDDIHRSGRGKGD 295

Query: 195 XXXXXPTSLEGPYSSGD--PLQRDSKSKENCG--------------------YELKRDSR 308
                  S E   SS D  P +R    KE+ G                    +  K++  
Sbjct: 296 PEKNGSRSWEKLQSSRDAIPGRRLKNDKESSGSGRHEEVTRNGRSAVSKETDWSCKKEYE 355

Query: 309 RKKRLGREHRSPKKYLGWKAKRSAS 383
           RK++  +E  SPK++   K +RS S
Sbjct: 356 RKRQRRKEIESPKRHGTKKGRRSTS 380


>ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [Amborella trichopoda]
           gi|548858409|gb|ERN16190.1| hypothetical protein
           AMTR_s00030p00238130 [Amborella trichopoda]
          Length = 706

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +3

Query: 36  DHSKSRQICFKCGLIGHRMRNCPQEDGYRREKVSQFDRRQDKDVSF 173
           D+ K  Q C+ CG  GH +RNCP+ D  RR+K ++F RR+D D+ F
Sbjct: 238 DNLKPSQCCYNCGSTGHILRNCPKADSLRRKKGTRFSRRRDPDIRF 283


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