BLASTX nr result
ID: Akebia24_contig00025459
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00025459 (387 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis] 63 4e-08 ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Popu... 61 1e-07 ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [A... 55 8e-06 >gb|EXC01941.1| Cold-inducible RNA-binding protein [Morus notabilis] Length = 667 Score = 63.2 bits (152), Expect = 4e-08 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Frame = +3 Query: 3 ERTINTTLKKPDHSKSRQICFKCGLIGHRMRNCPQEDGYRREKVSQFDRRQDKDV----- 167 ER + LK+P+H K +Q C+ CG +GH+MR+CP++ RR K ++F+R QD D+ Sbjct: 225 ERDGDRVLKRPNHLKFQQNCYGCGALGHKMRDCPRKHSSRR-KFTRFERSQDDDIEKSRG 283 Query: 168 --SFXXXXXXXXXXXXPTSLEGP----YSSGDPLQRDSKSKENCGYELKRDSRR--KKRL 323 T L S L+ K+ + + R KKR Sbjct: 284 GGELERFRSKSRGNMRSTRLRHKNDKWTSDSGQLRMSMKNGNSSDTDRVRGKEHGVKKRS 343 Query: 324 GREHRSPKKYLGWKAKRSAS 383 RE RSPK++ K+KR AS Sbjct: 344 KRETRSPKRHSAKKSKRLAS 363 >ref|XP_002308446.1| hypothetical protein POPTR_0006s22220g [Populus trichocarpa] gi|222854422|gb|EEE91969.1| hypothetical protein POPTR_0006s22220g [Populus trichocarpa] Length = 693 Score = 61.2 bits (147), Expect = 1e-07 Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 22/145 (15%) Frame = +3 Query: 15 NTTLKKPDHSKSRQICFKCGLIGHRMRNCPQEDGYRREKVSQFDRRQDKDVSFXXXXXXX 194 + TL + KS++ C+KCG GH+MRNCPQE+ +R V++FD R D+ Sbjct: 237 DATLNRLSDVKSQETCYKCGGSGHKMRNCPQENASQR-NVTRFDSRHTDDIHRSGRGKGD 295 Query: 195 XXXXXPTSLEGPYSSGD--PLQRDSKSKENCG--------------------YELKRDSR 308 S E SS D P +R KE+ G + K++ Sbjct: 296 PEKNGSRSWEKLQSSRDAIPGRRLKNDKESSGSGRHEEVTRNGRSAVSKETDWSCKKEYE 355 Query: 309 RKKRLGREHRSPKKYLGWKAKRSAS 383 RK++ +E SPK++ K +RS S Sbjct: 356 RKRQRRKEIESPKRHGTKKGRRSTS 380 >ref|XP_006854723.1| hypothetical protein AMTR_s00030p00238130 [Amborella trichopoda] gi|548858409|gb|ERN16190.1| hypothetical protein AMTR_s00030p00238130 [Amborella trichopoda] Length = 706 Score = 55.5 bits (132), Expect = 8e-06 Identities = 22/46 (47%), Positives = 31/46 (67%) Frame = +3 Query: 36 DHSKSRQICFKCGLIGHRMRNCPQEDGYRREKVSQFDRRQDKDVSF 173 D+ K Q C+ CG GH +RNCP+ D RR+K ++F RR+D D+ F Sbjct: 238 DNLKPSQCCYNCGSTGHILRNCPKADSLRRKKGTRFSRRRDPDIRF 283