BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00022780
         (423 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su...   239   4e-61
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...   230   1e-58
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus...   229   4e-58
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su...   227   1e-57
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...   227   1e-57
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i...   226   2e-57
ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [A...   226   3e-57
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...   225   4e-57
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...   224   7e-57
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not...   224   1e-56
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   224   1e-56
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su...   223   2e-56
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su...   223   2e-56
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...   223   3e-56
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca...   223   3e-56
ref|NP_193902.1| DNA-directed RNA polymerase II subunit RPB2 [Ar...   222   5e-56
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas...   222   5e-56
ref|XP_002867829.1| hypothetical protein ARALYDRAFT_492703 [Arab...   222   5e-56
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...   222   5e-56
emb|CAA79527.1| RNA polymerase II second largest subunit [Arabid...   222   5e-56

>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
           vinifera] gi|147841183|emb|CAN72948.1| hypothetical
           protein VITISV_033708 [Vitis vinifera]
           gi|302143287|emb|CBI21848.3| unnamed protein product
           [Vitis vinifera]
          Length = 1193

 Score =  239 bits (609), Expect = 4e-61
 Identities = 121/130 (93%), Positives = 123/130 (94%), Gaps = 4/130 (3%)
 Frame = -2

Query: 380 MYGGDEYDPSVNEDEED----ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 213
           MYG DEYDP+V E+EED    ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 1   MYGEDEYDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 60

Query: 212 DESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 33
           DESADIEIRPESQHNPGRQ DFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 61  DESADIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 120

Query: 32  LTYSAPLYVD 3
           LTYSAPLYVD
Sbjct: 121 LTYSAPLYVD 130


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron
           macrophyllum]
          Length = 1191

 Score =  230 bits (587), Expect = 1e-58
 Identities = 112/122 (91%), Positives = 118/122 (96%)
 Frame = -2

Query: 368 DEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 189
           +EYDP++ ++EE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI
Sbjct: 7   EEYDPTMEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 66

Query: 188 RPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 9
           RPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY
Sbjct: 67  RPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 126

Query: 8   VD 3
           VD
Sbjct: 127 VD 128


>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
          Length = 1197

 Score =  229 bits (583), Expect = 4e-58
 Identities = 115/130 (88%), Positives = 120/130 (92%)
 Frame = -2

Query: 392 FLEKMYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 213
           F E+ Y  +E++    EDEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 7   FYEQGYPDEEFE---EEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 63

Query: 212 DESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 33
           DESADIEIRPESQHNPG QPDF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN
Sbjct: 64  DESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 123

Query: 32  LTYSAPLYVD 3
           LTYSAPLYVD
Sbjct: 124 LTYSAPLYVD 133


>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Solanum tuberosum]
          Length = 1191

 Score =  227 bits (579), Expect = 1e-57
 Identities = 113/124 (91%), Positives = 119/124 (95%), Gaps = 2/124 (1%)
 Frame = -2

Query: 368 DEYDP--SVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 195
           DEY+P  +V++DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 5   DEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64

Query: 194 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 15
           EIRPESQHNPG Q DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65  EIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124

Query: 14  LYVD 3
           LYVD
Sbjct: 125 LYVD 128


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
           gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
           Full=DNA-directed RNA polymerase II subunit RPB2;
           Short=RNA polymerase II subunit 2; Short=RNA polymerase
           II subunit B2; AltName: Full=DNA-directed RNA polymerase
           II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
           polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score =  227 bits (579), Expect = 1e-57
 Identities = 113/124 (91%), Positives = 119/124 (95%), Gaps = 2/124 (1%)
 Frame = -2

Query: 368 DEYDP--SVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 195
           DEY+P  +V++DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 5   DEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64

Query: 194 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 15
           EIRPESQHNPG Q DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65  EIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124

Query: 14  LYVD 3
           LYVD
Sbjct: 125 LYVD 128


>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
           cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
           polymerase family protein isoform 1 [Theobroma cacao]
          Length = 1189

 Score =  226 bits (577), Expect = 2e-57
 Identities = 114/128 (89%), Positives = 118/128 (92%), Gaps = 2/128 (1%)
 Frame = -2

Query: 380 MYGGDEYDPSV--NEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 207
           M    EYDP +  +ED+E+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1   MEDDSEYDPQLMDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60

Query: 206 SADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 27
           SADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61  SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120

Query: 26  YSAPLYVD 3
           YSAPLYVD
Sbjct: 121 YSAPLYVD 128


>ref|XP_006859038.1| hypothetical protein AMTR_s00068p00181410 [Amborella trichopoda]
           gi|548863150|gb|ERN20505.1| hypothetical protein
           AMTR_s00068p00181410 [Amborella trichopoda]
          Length = 1190

 Score =  226 bits (575), Expect = 3e-57
 Identities = 115/123 (93%), Positives = 117/123 (95%)
 Frame = -2

Query: 371 GDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 192
           G E D  VNEDEE ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIE
Sbjct: 3   GGEDDDYVNEDEE-ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 61

Query: 191 IRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 12
           IRPESQHNPGRQ DF+ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL
Sbjct: 62  IRPESQHNPGRQADFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 121

Query: 11  YVD 3
           YVD
Sbjct: 122 YVD 124


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score =  225 bits (574), Expect = 4e-57
 Identities = 115/135 (85%), Positives = 120/135 (88%), Gaps = 6/135 (4%)
 Frame = -2

Query: 389 LEKMYGGDEYDPSVN------EDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 228
           LE+ Y   EY+          E+EEDI+QEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT
Sbjct: 3   LEEEYYEQEYNNEAENENDEEEEEEDISQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT 62

Query: 227 MQEIVDESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKA 48
           MQEIVDESADIEIRPESQHNPG+QPDF ETIYKISFGQIYLSKPMMTESDGETATLFPKA
Sbjct: 63  MQEIVDESADIEIRPESQHNPGQQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKA 122

Query: 47  ARLRNLTYSAPLYVD 3
           ARLRNLTYSAPLYVD
Sbjct: 123 ARLRNLTYSAPLYVD 137


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 1194

 Score =  224 bits (572), Expect = 7e-57
 Identities = 115/131 (87%), Positives = 117/131 (89%), Gaps = 5/131 (3%)
 Frame = -2

Query: 380 MYGGDEYDPSVNEDEED-----ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 216
           M    EYD ++NED ED     ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1   MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60

Query: 215 VDESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 36
           VDESADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61  VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120

Query: 35  NLTYSAPLYVD 3
           NLTYSAPLYVD
Sbjct: 121 NLTYSAPLYVD 131


>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 1193

 Score =  224 bits (570), Expect = 1e-56
 Identities = 112/124 (90%), Positives = 116/124 (93%), Gaps = 3/124 (2%)
 Frame = -2

Query: 365 EYDPSVNEDEED---ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 195
           EYD   N+D++D   ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6   EYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 65

Query: 194 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 15
           EIRPESQHNPG Q DF+ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 66  EIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 125

Query: 14  LYVD 3
           LYVD
Sbjct: 126 LYVD 129


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Cucumis sativus] gi|449479313|ref|XP_004155566.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB2-like [Cucumis sativus]
          Length = 1199

 Score =  224 bits (570), Expect = 1e-56
 Identities = 111/126 (88%), Positives = 116/126 (92%)
 Frame = -2

Query: 380 MYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 201
           M   D+ D ++ +DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 11  MNDDDDMDQAIPDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 70

Query: 200 DIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 21
           DIEIRPESQHNPG Q D  ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 71  DIEIRPESQHNPGHQSDVAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 130

Query: 20  APLYVD 3
           APLYVD
Sbjct: 131 APLYVD 136


>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Fragaria vesca subsp. vesca]
          Length = 1191

 Score =  223 bits (569), Expect = 2e-56
 Identities = 111/123 (90%), Positives = 116/123 (94%), Gaps = 2/123 (1%)
 Frame = -2

Query: 365 EYDPSVNED--EEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 192
           EY+   N+D  E++ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE+ADIE
Sbjct: 6   EYEEQYNDDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDEAADIE 65

Query: 191 IRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 12
           IRPESQHNPG QPDF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL
Sbjct: 66  IRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 125

Query: 11  YVD 3
           YVD
Sbjct: 126 YVD 128


>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Glycine max]
          Length = 1193

 Score =  223 bits (568), Expect = 2e-56
 Identities = 113/129 (87%), Positives = 117/129 (90%)
 Frame = -2

Query: 389 LEKMYGGDEYDPSVNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 210
           LE+    DE     ++DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 3   LEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 62

Query: 209 ESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 30
           ESADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
Sbjct: 63  ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 122

Query: 29  TYSAPLYVD 3
           TYSAPLYVD
Sbjct: 123 TYSAPLYVD 131


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Glycine max]
          Length = 1192

 Score =  223 bits (567), Expect = 3e-56
 Identities = 113/124 (91%), Positives = 115/124 (92%), Gaps = 3/124 (2%)
 Frame = -2

Query: 365 EYDPSVNE---DEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 195
           EYD  + E   DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 8   EYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67

Query: 194 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 15
           EIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 68  EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 127

Query: 14  LYVD 3
           LYVD
Sbjct: 128 LYVD 131


>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 1213

 Score =  223 bits (567), Expect = 3e-56
 Identities = 112/124 (90%), Positives = 116/124 (93%), Gaps = 2/124 (1%)
 Frame = -2

Query: 368 DEYDPSVNE--DEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 195
           +E+D  + E  DEE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 9   NEFDQQMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 68

Query: 194 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 15
           EIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 69  EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 128

Query: 14  LYVD 3
           LYVD
Sbjct: 129 LYVD 132


>ref|NP_193902.1| DNA-directed RNA polymerase II subunit RPB2 [Arabidopsis thaliana]
           gi|21542437|sp|P38420.2|NRPB2_ARATH RecName:
           Full=DNA-directed RNA polymerase II subunit 2; AltName:
           Full=DNA-directed RNA polymerase II 135 kDa polypeptide;
           AltName: Full=DNA-directed RNA polymerase II subunit
           RPB2; Short=RNA polymerase II subunit 2; Short=RNA
           polymerase II subunit B2; AltName: Full=Protein EMBRYO
           DEFECTIVE 1989 gi|4455279|emb|CAB36815.1| DNA-directed
           RNA polymerase (EC 2.7.7.6) II second largest chain
           [Arabidopsis thaliana] gi|7268968|emb|CAB81278.1|
           DNA-directed RNA polymerase (EC 2.7.7.6) II second
           largest chain [Arabidopsis thaliana]
           gi|332659093|gb|AEE84493.1| DNA-directed RNA polymerase
           II subunit RPB2 [Arabidopsis thaliana]
          Length = 1188

 Score =  222 bits (565), Expect = 5e-56
 Identities = 111/126 (88%), Positives = 117/126 (92%), Gaps = 4/126 (3%)
 Frame = -2

Query: 368 DEYDPSV----NEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 201
           +EY+P      ++D+E+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 4   NEYEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 63

Query: 200 DIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 21
           DIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 64  DIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 123

Query: 20  APLYVD 3
           APLYVD
Sbjct: 124 APLYVD 129


>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
           gi|561021391|gb|ESW20162.1| hypothetical protein
           PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score =  222 bits (565), Expect = 5e-56
 Identities = 112/124 (90%), Positives = 115/124 (92%), Gaps = 3/124 (2%)
 Frame = -2

Query: 365 EYDPSVNE---DEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 195
           EYD  + E   DE+DITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 8   EYDQQMMEEEDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 67

Query: 194 EIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 15
           EIRPESQHNPG Q DF ETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 68  EIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 127

Query: 14  LYVD 3
           LYVD
Sbjct: 128 LYVD 131


>ref|XP_002867829.1| hypothetical protein ARALYDRAFT_492703 [Arabidopsis lyrata subsp.
           lyrata] gi|297313665|gb|EFH44088.1| hypothetical protein
           ARALYDRAFT_492703 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score =  222 bits (565), Expect = 5e-56
 Identities = 111/126 (88%), Positives = 117/126 (92%), Gaps = 4/126 (3%)
 Frame = -2

Query: 368 DEYDPSV----NEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 201
           +EY+P      ++D+E+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 4   NEYEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 63

Query: 200 DIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 21
           DIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 64  DIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 123

Query: 20  APLYVD 3
           APLYVD
Sbjct: 124 APLYVD 129


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score =  222 bits (565), Expect = 5e-56
 Identities = 112/132 (84%), Positives = 119/132 (90%), Gaps = 3/132 (2%)
 Frame = -2

Query: 389 LEKMYGGDEYDPS---VNEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQE 219
           +E+ Y   +YD +     E+EE+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQE
Sbjct: 1   MEEEYEEQQYDMNNEEEEEEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQE 60

Query: 218 IVDESADIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARL 39
           IVDESADIEIRPESQHNPG Q DF ETIYKI+FGQIYLSKPMMTESDGETATLFPKAARL
Sbjct: 61  IVDESADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARL 120

Query: 38  RNLTYSAPLYVD 3
           RNLTYSAPLYVD
Sbjct: 121 RNLTYSAPLYVD 132


>emb|CAA79527.1| RNA polymerase II second largest subunit [Arabidopsis thaliana]
          Length = 1188

 Score =  222 bits (565), Expect = 5e-56
 Identities = 111/126 (88%), Positives = 117/126 (92%), Gaps = 4/126 (3%)
 Frame = -2

Query: 368 DEYDPSV----NEDEEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 201
           +EY+P      ++D+E+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 4   NEYEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 63

Query: 200 DIEIRPESQHNPGRQPDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 21
           DIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 64  DIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 123

Query: 20  APLYVD 3
           APLYVD
Sbjct: 124 APLYVD 129