BLASTX nr result

ID: Akebia24_contig00021712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00021712
         (748 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301858.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_004512217.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    61   4e-07
ref|XP_007202196.1| hypothetical protein PRUPE_ppa018835mg [Prun...    59   2e-06
ref|XP_006574295.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    58   4e-06
ref|XP_003611834.1| Pentatricopeptide repeat-containing protein ...    58   4e-06
gb|AEV41041.1| putative pentatricopeptide [Oryza minuta]               57   5e-06
gb|EMT29195.1| hypothetical protein F775_11464 [Aegilops tauschii]     57   7e-06
ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-06

>ref|XP_004301858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Fragaria vesca subsp. vesca]
          Length = 704

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = +1

Query: 70  RINFNKLIFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEI-RKIKET 246
           R   +  + N +L IG+H A+Q+LK++ ED  T  LLSN+ A AGKWD ++EI RKIKE 
Sbjct: 586 RTLLSSCVINKNLEIGVHAAEQVLKVDAEDSATHILLSNLYASAGKWDEVVEIRRKIKEL 645

Query: 247 QVRHHPELS 273
            +   P LS
Sbjct: 646 TLEKDPGLS 654


>ref|XP_004512217.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g50420-like [Cicer arietinum]
          Length = 966

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
 Frame = +1

Query: 91   IFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEIRK-IKETQVRHHPE 267
            + N  L +G+H A+++L+LN EDG T+ LLSN+ A AG+WD + EIR+ ++   +   P 
Sbjct: 850  VLNKSLKVGVHAAEEVLRLNAEDGPTLVLLSNLYAAAGRWDEVAEIRRNMRGLMMEKDPG 909

Query: 268  LS*TK----IHELTSDEQYH 315
            LS  +    IH  +S +Q H
Sbjct: 910  LSWIEAKNDIHVFSSGDQSH 929


>ref|XP_007202196.1| hypothetical protein PRUPE_ppa018835mg [Prunus persica]
           gi|462397727|gb|EMJ03395.1| hypothetical protein
           PRUPE_ppa018835mg [Prunus persica]
          Length = 654

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = +1

Query: 70  RINFNKLIFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEI-RKIKET 246
           R   +  + N +L +G+H A+Q+L L+ ED  T+ LLSN+ A AGKW +++E+ RKIK  
Sbjct: 536 RTLLSSCVINKNLKVGVHAAEQVLSLDAEDSATLVLLSNLYAAAGKWGSVVEMRRKIKVL 595

Query: 247 QVRHHPELS 273
            +   P LS
Sbjct: 596 TLEKDPGLS 604


>ref|XP_006574295.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g50420-like [Glycine max]
          Length = 640

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = +1

Query: 70  RINFNKLIFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEIRK-IKET 246
           R   +  + N +  +GIH A+++L+L  EDG T+ LLSN+ A A +WD + EIR+ ++  
Sbjct: 495 RTLLSSCVINKNFKVGIHAAEEVLRLKAEDGPTLVLLSNLYAVARRWDKVAEIRRNVRGL 554

Query: 247 QVRHHPELS*TK----IHELTSDEQYH 315
            +   P LS  +    IH L+S +Q H
Sbjct: 555 MLEKDPGLSWIEAKNDIHVLSSGDQSH 581


>ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355513169|gb|AES94792.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 985

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
 Frame = +1

Query: 91   IFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEIRK-IKETQVRHHPE 267
            + N +L +G+  A+++L+ N EDG T+ LLSN+ A AG+WD + EIR+ +K   +   P 
Sbjct: 869  VINKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEPG 928

Query: 268  LS*TK----IHELTSDEQYH 315
            LS  +    IH  +S +Q H
Sbjct: 929  LSWIEAKNDIHVFSSGDQSH 948


>gb|AEV41041.1| putative pentatricopeptide [Oryza minuta]
          Length = 724

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
 Frame = +1

Query: 70  RINFNKLIFNIHLGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEIR-KIKET 246
           RI  +  I   +L IG+H A+Q+L+ + +D +T  LLSN+ A  GKWD + EIR K++  
Sbjct: 607 RILLSSCITFRNLSIGVHAAEQVLEQDPDDISTHILLSNLYASLGKWDVVAEIRKKMRGL 666

Query: 247 QVRHHPELS*TK----IHELTSDEQYHSE 321
            V   P LS  +    +H  ++D++ HS+
Sbjct: 667 MVEKEPGLSWVEMKNVVHVFSADDECHSQ 695


>gb|EMT29195.1| hypothetical protein F775_11464 [Aegilops tauschii]
          Length = 538

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
 Frame = +1

Query: 106 LGIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEIR-KIKETQVRHHPELS--- 273
           L +GIH A+Q L  + +D +T  LLSN+ A AGKWD + EIR KI+   V   P LS   
Sbjct: 433 LSVGIHAAEQALAQDPDDMSTHVLLSNLYAAAGKWDVVAEIRKKIRGMMVEKEPGLSWIE 492

Query: 274 -*TKIHELTSDEQYHSE 321
             + IH  ++D++ HS+
Sbjct: 493 IKSTIHVFSADDECHSQ 509


>ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 690

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
 Frame = +1

Query: 109 GIGIHTAKQILKLNTEDGTTVNLLSNICAEAGKWDAIIEI-RKIKETQVRHHPELS---- 273
           G+G++ AKQ+L+++ ED     LLSN+ A AGKWD ++E+ R+I+E  V   P +S    
Sbjct: 590 GVGVNAAKQVLRIDPEDSAAHILLSNLYAAAGKWDGVVEMRRRIREKMVGKDPGVSWIEA 649

Query: 274 *TKIHELTSDEQYHSE 321
            +KI   +S  Q H E
Sbjct: 650 KSKIQSFSSGLQSHPE 665


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