BLASTX nr result
ID: Akebia24_contig00021413
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00021413
(819 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 318 2e-84
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 310 4e-82
ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao... 305 1e-80
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 303 5e-80
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 303 5e-80
ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prun... 298 2e-78
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,... 298 2e-78
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 297 4e-78
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 295 1e-77
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 288 1e-75
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi... 277 4e-72
ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Caps... 276 7e-72
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 275 1e-71
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ... 275 1e-71
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp... 275 1e-71
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum] 274 2e-71
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp... 274 2e-71
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ... 274 3e-71
dbj|BAD94843.1| putative protein [Arabidopsis thaliana] 272 9e-71
ref|NP_193610.1| pentatricopeptide repeat protein DOT4 [Arabidop... 272 9e-71
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 318 bits (815), Expect = 2e-84
Identities = 154/266 (57%), Positives = 209/266 (78%)
Frame = +3
Query: 21 KKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSIL 200
+++ SARK+FDEL DRDVISWN++ISGYVSNGL KGL++F +M G++ DLATMVS++
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVV 258
Query: 201 PACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSV 380
C+ +LLG+A+HGYAIK+ F +E++LNN LLDMY+K G+L+S++Q+F M ERSV
Sbjct: 259 AGCSNTGMLLLGRALHGYAIKAS-FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 317
Query: 381 VTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDY 560
V+WTSMI+GYAREG D++V+LF EME EGI PD+FT+T+ILHACA G LE+GKDVH+Y
Sbjct: 318 VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY 377
Query: 561 IVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEA 740
I N +QS+LFV+NALMDMYAKCGS+G+A VF + KD+V W+ MI GY + +EA
Sbjct: 378 IKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEA 437
Query: 741 IDLFHAMKWSGVEPNDVTFVGLLLAC 818
++LF M+++ +PN +T +L AC
Sbjct: 438 LNLFVEMQYNS-KPNSITMACILPAC 462
Score = 238 bits (607), Expect = 2e-60
Identities = 114/270 (42%), Positives = 177/270 (65%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSK + SA ++F+ + +R V+SW ++I+GY GL + +F EM G+ D+ T+
Sbjct: 296 YSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTI 355
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+IL ACA + GK +H Y IK ++ ++ ++N L+DMYAKCG + + +F +M
Sbjct: 356 TTILHACACTGLLENGKDVHNY-IKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQ 414
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ + A+ LF EM+ KP+ T+ IL ACAS +LE G++
Sbjct: 415 VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQE 473
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H +I+RNG + VANAL+DMY KCG++G AR++FD I KD+V W+ MI GYG+HG
Sbjct: 474 IHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGY 533
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI F+ M+ SG+EP++V+F+ +L AC
Sbjct: 534 GSEAIAAFNEMRNSGIEPDEVSFISILYAC 563
Score = 146 bits (368), Expect = 1e-32
Identities = 78/236 (33%), Positives = 132/236 (55%), Gaps = 2/236 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F E++ +D++SWN +I GY N LP + L +F EM+++ + TM
Sbjct: 397 YAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSI-TM 455
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++ + G+ IHG+ +++ F+ + + N L+DMY KCG L + +F +
Sbjct: 456 ACILPACASLAALERGQEIHGHILRNG-FSLDRHVANALVDMYLKCGALGLARLLFDMIP 514
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
E+ +V+WT MI+GY G A+ F EM GI+PD + SIL+AC+ +G L+ G
Sbjct: 515 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 574
Query: 549 VHDYIVRN-GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
+ + N ++ ++D+ A+ G++ A + D +W A++ G
Sbjct: 575 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630
Score = 132 bits (331), Expect = 2e-28
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 49/304 (16%)
Frame = +3
Query: 54 ELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILL 233
E D + +N I + G + +E+ ++ D++L T S+L CA++ +I
Sbjct: 62 ETIDCKITDYNIEICRFCELGNLRRAMELINQS--PKPDLELRTYCSVLQLCADLKSIQD 119
Query: 234 GKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDL-------------------------- 335
G+ IH I+S+ + L + L+ MY CGDL
Sbjct: 120 GRRIHSI-IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYA 178
Query: 336 -----------------------SSSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKL 446
S+ ++F ++ +R V++W SMISGY G + + L
Sbjct: 179 KIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDL 238
Query: 447 FREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAK 626
F +M + GI DL T+ S++ C++ G L G+ +H Y ++ L + N L+DMY+K
Sbjct: 239 FEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSK 298
Query: 627 CGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGL 806
G++ +A VF+ + + VV W++MI GY G ++ LFH M+ G+ P+ T +
Sbjct: 299 SGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTI 358
Query: 807 LLAC 818
L AC
Sbjct: 359 LHAC 362
Score = 70.1 bits (170), Expect = 9e-10
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Frame = +3
Query: 309 DMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLF 488
++Y C + +SV + + + + + I + G A++L + KPDL
Sbjct: 46 NLYHSCATIGTSV-LPSETIDCKITDYNIEICRFCELGNLRRAMELINQSP----KPDLE 100
Query: 489 --TVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFD 662
T S+L CA S++ G+ +H I N ++ + + + L+ MY CG + R +FD
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160
Query: 663 RISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGV 776
+++N+ V +W+ ++ GY G E++ LF M+ G+
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI 198
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 310 bits (794), Expect = 4e-82
Identities = 151/272 (55%), Positives = 206/272 (75%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
++Y K +++ A K+FDEL DRDV+SWN +ISGY++NG+ KGLE+F EM G +VDLA
Sbjct: 241 TYYFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLA 300
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
TMV++L CA ++ G+A+H +A+K+ F++E+S NNTLLDMY+KCGDL ++++F K
Sbjct: 301 TMVTVLSGCANCGALMFGRAVHAFALKAC-FSKEISFNNTLLDMYSKCGDLDGAIRVFEK 359
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M ERSVV+WTSMI+GYAREG D A++LFR M EGI+PD++ +TSILHACA +G LE G
Sbjct: 360 MGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAITSILHACACDGLLEIG 419
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KDVHDYI N +QS+L+V+NALMDMYAKCGS+ +A VF+++ KD+V W+ MI GY +
Sbjct: 420 KDVHDYIKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKN 479
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+DLF AM EP+ VT +L AC
Sbjct: 480 SCPNEALDLFVAM-LQNFEPDGVTMACILPAC 510
Score = 221 bits (562), Expect = 3e-55
Identities = 106/270 (39%), Positives = 176/270 (65%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ +R V+SW ++I+GY G+ + +F M G++ D+ +
Sbjct: 344 YSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDGAIRLFRGMVREGIEPDVYAI 403
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA + +GK +H Y IK + + ++N L+DMYAKCG ++ + +F +M
Sbjct: 404 TSILHACACDGLLEIGKDVHDY-IKENDMQSSLYVSNALMDMYAKCGSMADAESVFNQMP 462
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ + A+ LF M ++ +PD T+ IL ACAS +LE G++
Sbjct: 463 VKDIVSWNTMIGGYSKNSCPNEALDLFVAM-LQNFEPDGVTMACILPACASLAALERGRE 521
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H YI+R+G+ ++ VANA++DMY KCG + AR +FD I KD++ W+ MI GYG+HG
Sbjct: 522 IHGYILRHGISADRNVANAIVDMYVKCGVLVLARSLFDMIPAKDLISWTIMIAGYGMHGF 581
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G +AI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 582 GCDAIATFNDMRQAGIEPDEVSFISVLYAC 611
Score = 159 bits (402), Expect = 1e-36
Identities = 83/267 (31%), Positives = 144/267 (53%)
Frame = +3
Query: 18 CKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSI 197
C + R++F+++ + V WN ++ Y G + L +F +M+ G+ D T +
Sbjct: 145 CGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKESLYLFKKMQSLGIAADSYTFSCV 204
Query: 198 LPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERS 377
L A + N+ G+++HG+ +K F ++ N+L+ Y K + + ++F ++S+R
Sbjct: 205 LKCLAVVGNVKEGESVHGFMLKLG-FGCNNTVLNSLITYYFKSRRVKDAHKLFDELSDRD 263
Query: 378 VVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHD 557
VV+W MISGY G + +++F+EM G DL T+ ++L CA+ G+L G+ VH
Sbjct: 264 VVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATMVTVLSGCANCGALMFGRAVHA 323
Query: 558 YIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHE 737
+ ++ + N L+DMY+KCG + A VF+++ + VV W++MI GY G
Sbjct: 324 FALKACFSKEISFNNTLLDMYSKCGDLDGAIRVFEKMGERSVVSWTSMIAGYAREGVFDG 383
Query: 738 AIDLFHAMKWSGVEPNDVTFVGLLLAC 818
AI LF M G+EP+ +L AC
Sbjct: 384 AIRLFRGMVREGIEPDVYAITSILHAC 410
Score = 138 bits (347), Expect = 3e-30
Identities = 73/241 (30%), Positives = 133/241 (55%), Gaps = 3/241 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F+++ +D++SWN +I GY N P + L++F M + D TM
Sbjct: 445 YAKCGSMADAESVFNQMPVKDIVSWNTMIGGYSKNSCPNEALDLFVAM-LQNFEPDGVTM 503
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++ + G+ IHGY ++ H + + ++ N ++DMY KCG L + +F +
Sbjct: 504 ACILPACASLAALERGREIHGYILR-HGISADRNVANAIVDMYVKCGVLVLARSLFDMIP 562
Query: 369 ERSVVTWTSMISGYAREG-QCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGK 545
+ +++WT MI+GY G CD A+ F +M GI+PD + S+L+AC+ +G ++ G
Sbjct: 563 AKDLISWTIMIAGYGMHGFGCD-AIATFNDMRQAGIEPDEVSFISVLYACSHSGLVDEGW 621
Query: 546 DVHDYI-VRNGLQSNLFVANALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIVGYGL 719
+ + ++ L ++D+ ++ G++ A R + D +W +++ G +
Sbjct: 622 RFFNMMRYECNIEPKLEHYACMVDLLSRTGNLSEAYRFIEMMPVAPDATIWGSLLCGCRI 681
Query: 720 H 722
H
Sbjct: 682 H 682
Score = 124 bits (310), Expect = 5e-26
Identities = 71/247 (28%), Positives = 127/247 (51%)
Frame = +3
Query: 78 SWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKAIHGYA 257
++NA I + G K +E+ S +D T SIL CA++ ++ GK +H
Sbjct: 65 NYNAEIGRFCEVGNLEKAMEVLYSSEKSKIDTK--TYCSILQLCADLKSLEDGKKVHSII 122
Query: 258 IKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYAREGQCDIA 437
+S ++ L + L+ M+ CGDL ++F K+ V W ++ Y++ G +
Sbjct: 123 CESGIVIDDGVLGSKLVFMFVTCGDLKEGRRVFNKIDNGKVFIWNLLMHEYSKTGNFKES 182
Query: 438 VKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDM 617
+ LF++M+ GI D +T + +L A G+++ G+ VH ++++ G N V N+L+
Sbjct: 183 LYLFKKMQSLGIAADSYTFSCVLKCLAVVGNVKEGESVHGFMLKLGFGCNNTVLNSLITY 242
Query: 618 YAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTF 797
Y K + +A +FD +S++DVV W+ MI GY +G + +++F M G + T
Sbjct: 243 YFKSRRVKDAHKLFDELSDRDVVSWNCMISGYIANGVAEKGLEVFKEMLNLGFNVDLATM 302
Query: 798 VGLLLAC 818
V +L C
Sbjct: 303 VTVLSGC 309
>ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao]
gi|508780700|gb|EOY27956.1| Pentatricopeptide, putative
[Theobroma cacao]
Length = 874
Score = 305 bits (781), Expect = 1e-80
Identities = 149/272 (54%), Positives = 205/272 (75%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K K++ SA ++FDEL DRDVISWN++ISGYVSNGL KGLE+F EM + G+DVDLA
Sbjct: 243 TFYFKGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLA 302
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+V++L CA + LGKA+H AIK+ F +++ NNTLLDMY+KCGDL ++++F K
Sbjct: 303 TIVTVLVGCANSGTLSLGKAVHALAIKAC-FERKLNFNNTLLDMYSKCGDLDGALRVFEK 361
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M ER+VV+WTSMI+GY R+GQ D A++L ++ME EG+K D+ +TS+LHACA +GSLE+G
Sbjct: 362 MGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAITSVLHACARSGSLENG 421
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KDVHDYI N ++SNLFV NALMDMYAKCGS+ +A +F R++ KD++ W+ MI GY +
Sbjct: 422 KDVHDYIKANNVESNLFVCNALMDMYAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKN 481
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+ + AM ++P+ T +L AC
Sbjct: 482 CLPNEALKMLAAM-LKELKPDSRTLACILPAC 512
Score = 233 bits (593), Expect = 8e-59
Identities = 110/270 (40%), Positives = 179/270 (66%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ +R+V+SW ++I+GY +G + + +M GV +D+ +
Sbjct: 346 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGQSDGAIRLLQQMEREGVKLDVVAI 405
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
S+L ACA ++ GK +H Y IK++ + + N L+DMYAKCG + + IF +M+
Sbjct: 406 TSVLHACARSGSLENGKDVHDY-IKANNVESNLFVCNALMDMYAKCGSMEDANSIFSRMA 464
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +MI GY++ + A+K+ M E +KPD T+ IL ACAS +LE GK+
Sbjct: 465 VKDIISWNTMIGGYSKNCLPNEALKMLAAMLKE-LKPDSRTLACILPACASLAALERGKE 523
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H +I+RNG S+ VANAL+D+Y KCG + AR++FD IS+KD+V W+ MI GYG+HG
Sbjct: 524 IHGHILRNGYFSDRHVANALVDLYVKCGVLALARLLFDMISSKDLVSWTVMIAGYGMHGF 583
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EAI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 584 ANEAITTFNEMRDAGIEPDEVSFISILYAC 613
Score = 172 bits (435), Expect = 2e-40
Identities = 93/272 (34%), Positives = 150/272 (55%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
SFY C + R IFDE++ + V WN +++ Y G + + +F M G++VD
Sbjct: 142 SFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFGDFKESIYLFKMMMKKGIEVDSY 201
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T IL A + G+ +HGY +K F S+ N+L+ Y K + S+ ++F +
Sbjct: 202 TFSCILKCLAASGGLKEGERVHGYLLKLG-FGSYNSVVNSLITFYFKGKRVESASELFDE 260
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
+ +R V++W SMISGY G + +++F+EM GI DL T+ ++L CA++G+L G
Sbjct: 261 LIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDVDLATIVTVLVGCANSGTLSLG 320
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VH ++ + L N L+DMY+KCG + A VF+++ ++VV W++MI GY
Sbjct: 321 KAVHALAIKACFERKLNFNNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRD 380
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+ AI L M+ GV+ + V +L AC
Sbjct: 381 GQSDGAIRLLQQMEREGVKLDVVAITSVLHAC 412
Score = 146 bits (368), Expect = 1e-32
Identities = 82/237 (34%), Positives = 135/237 (56%), Gaps = 3/237 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A IF + +D+ISWN +I GY N LP + L++ + M + D T+
Sbjct: 447 YAKCGSMEDANSIFSRMAVKDIISWNTMIGGYSKNCLPNEALKMLAAM-LKELKPDSRTL 505
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++ + GK IHG+ +++ F++ + N L+D+Y KCG L+ + +F +S
Sbjct: 506 ACILPACASLAALERGKEIHGHILRNGYFSDR-HVANALVDLYVKCGVLALARLLFDMIS 564
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+WT MI+GY G + A+ F EM GI+PD + SIL+AC+ +G LE G
Sbjct: 565 SKDLVSWTVMIAGYGMHGFANEAITTFNEMRDAGIEPDEVSFISILYACSHSGLLEEGWR 624
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
YI+RN ++ L ++D+ ++ G++ A +R+ D +W A++ G
Sbjct: 625 FF-YIMRNDYNIEPKLEHYACMVDLLSRTGNLSKAFHFIERMPIAPDATIWGAVLCG 680
Score = 132 bits (333), Expect = 1e-28
Identities = 77/252 (30%), Positives = 135/252 (53%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKA 242
D V +NA I + G +E+ S S +++ T SIL CA++ ++ GK
Sbjct: 63 DNQVTDYNARIFQFCQLGNLHNAMELLSMSPNS--ELESKTYCSILQLCADLKSLKDGKK 120
Query: 243 IHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYAREG 422
+H I S+ + L + L+ Y CGDL IF +M ++ V W M++ YA+ G
Sbjct: 121 VHSI-INSNGVAVDEVLGSKLVSFYVTCGDLKEGRGIFDEMEKKKVFLWNYMLNEYAKFG 179
Query: 423 QCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVAN 602
++ LF+ M +GI+ D +T + IL A++G L+ G+ VH Y+++ G S V N
Sbjct: 180 DFKESIYLFKMMMKKGIEVDSYTFSCILKCLAASGGLKEGERVHGYLLKLGFGSYNSVVN 239
Query: 603 ALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEP 782
+L+ Y K + +A +FD + ++DV+ W++MI GY +G + +++F M + G++
Sbjct: 240 SLITFYFKGKRVESASELFDELIDRDVISWNSMISGYVSNGLAEKGLEVFKEMLYLGIDV 299
Query: 783 NDVTFVGLLLAC 818
+ T V +L+ C
Sbjct: 300 DLATIVTVLVGC 311
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 303 bits (776), Expect = 5e-80
Identities = 152/272 (55%), Positives = 205/272 (75%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K ++ SA+K+FDEL DRDVISWN++ISGY SNGL KG+ IF +M GV+VDLA
Sbjct: 247 AFYFKSGRVESAQKVFDELTDRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLA 306
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+V+ L ACA + LLG+A+H YAIK+ F+ E+ NTLLDMY+KCG+L ++VQ+F K
Sbjct: 307 TIVNALVACANIGTHLLGRAVHAYAIKAC-FDGEIMFRNTLLDMYSKCGELDAAVQVFEK 365
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
ERSVV+WTSMI+GYAREG+ + A++LF EME G+ PD+FT+TSILHACA +GSLE G
Sbjct: 366 TGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTITSILHACACSGSLEDG 425
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KDVH+YI +G++SNLFV NALMDMY+KCGS+ +A +VF R+ KD++ W+ MI GY +
Sbjct: 426 KDVHNYIRESGMESNLFVCNALMDMYSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKN 485
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF M+ + + +T +L AC
Sbjct: 486 RLPNEALKLFAEMQGKS-KADSITAACILPAC 516
Score = 225 bits (574), Expect = 1e-56
Identities = 108/270 (40%), Positives = 173/270 (64%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC ++ +A ++F++ +R V+SW ++I+GY G + + +F EM +GV D+ T+
Sbjct: 350 YSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGRSNEAIRLFYEMERNGVSPDIFTI 409
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ GK +H Y I+ + + N L+DMY+KCG + + +F +M
Sbjct: 410 TSILHACACSGSLEDGKDVHNY-IRESGMESNLFVCNALMDMYSKCGSMDDANLVFSRMP 468
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +MI GY++ + A+KLF EM+ + K D T IL ACAS +L G++
Sbjct: 469 AKDIISWNTMIGGYSKNRLPNEALKLFAEMQGKS-KADSITAACILPACASLAALAKGRE 527
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H +++RNG + VANAL+DMY KCG + A+V+FD I KD++ W+ MI GYG+HG
Sbjct: 528 IHGHVLRNGYFQDRHVANALVDMYVKCGLLALAQVLFDMIPVKDLISWTVMIAGYGMHGF 587
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI F M+ +G+EP++V+F+ +L AC
Sbjct: 588 GREAIAAFDEMRHAGIEPDEVSFISILYAC 617
Score = 167 bits (422), Expect = 6e-39
Identities = 89/270 (32%), Positives = 148/270 (54%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y C + AR+IFD + V WN +I+ Y + + +F +M+ G+ + T+
Sbjct: 148 YVNCGDLREARRIFDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTL 207
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+L + N+ G+ IH Y K F ++ N+L+ Y K G + S+ ++F +++
Sbjct: 208 SCVLKCFGALGNLKEGERIHAYLYKLG-FGCYNTVLNSLVAFYFKSGRVESAQKVFDELT 266
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+R V++W SMISGY+ G + V +F +M G+ DL T+ + L ACA+ G+ G+
Sbjct: 267 DRDVISWNSMISGYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVACANIGTHLLGRA 326
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH Y ++ + N L+DMY+KCG + A VF++ + VV W++MI GY G+
Sbjct: 327 VHAYAIKACFDGEIMFRNTLLDMYSKCGELDAAVQVFEKTGERSVVSWTSMIAGYAREGR 386
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EAI LF+ M+ +GV P+ T +L AC
Sbjct: 387 SNEAIRLFYEMERNGVSPDIFTITSILHAC 416
Score = 138 bits (348), Expect = 2e-30
Identities = 79/237 (33%), Positives = 133/237 (56%), Gaps = 3/237 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC M A +F + +D+ISWN +I GY N LP + L++F+EM+ D T
Sbjct: 451 YSKCGSMDDANLVFSRMPAKDIISWNTMIGGYSKNRLPNEALKLFAEMQGKS-KADSITA 509
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++ + G+ IHG+ +++ F ++ + N L+DMY KCG L+ + +F +
Sbjct: 510 ACILPACASLAALAKGREIHGHVLRNGYF-QDRHVANALVDMYVKCGLLALAQVLFDMIP 568
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++WT MI+GY G A+ F EM GI+PD + SIL+AC+ +G L+ G
Sbjct: 569 VKDLISWTVMIAGYGMHGFGREAIAAFDEMRHAGIEPDEVSFISILYACSHSG-LDEGWS 627
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIVG 710
+ ++RN ++ L ++D+ ++ G++ A R + D +W A++ G
Sbjct: 628 FFN-VMRNEYSIEPMLEHYACMVDLLSRTGNLSKAYRFIRKMPIEPDATIWGALLCG 683
Score = 120 bits (301), Expect = 6e-25
Identities = 66/217 (30%), Positives = 117/217 (53%)
Frame = +3
Query: 168 DVDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSV 347
+++ T S+L CA+ ++ GK +H I+ + L L+ MY CGDL +
Sbjct: 100 ELESRTYCSVLELCAQRKSLRDGKRVHS-VIRDSGVEVDGYLGEKLVFMYVNCGDLREAR 158
Query: 348 QIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNG 527
+IF + V W +I+ YA+ +V LF++M+ GI+ + T++ +L + G
Sbjct: 159 RIFDNIYTDRVFVWNLVINEYAKIRNFRESVSLFKKMQELGIQANSHTLSCVLKCFGALG 218
Query: 528 SLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIV 707
+L+ G+ +H Y+ + G V N+L+ Y K G + +A+ VFD ++++DV+ W++MI
Sbjct: 219 NLKEGERIHAYLYKLGFGCYNTVLNSLVAFYFKSGRVESAQKVFDELTDRDVISWNSMIS 278
Query: 708 GYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
GY +G G + + +F M GV + T V L+AC
Sbjct: 279 GYSSNGLGEKGVGIFGKMLSLGVNVDLATIVNALVAC 315
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 303 bits (776), Expect = 5e-80
Identities = 146/272 (53%), Positives = 207/272 (76%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K ++ SARK+FD L++RDV+SWN++IS YVSNG P KG+EIF EM +SG+DVDLA
Sbjct: 239 AFYFKNGRVESARKVFDALRERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLA 298
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T++++L AC++ N++LG+ +HGYA+K F+ ++ L N++LDMY+KCGDLS +V++F K
Sbjct: 299 TIINVLMACSDCGNVVLGRVVHGYAMKGG-FDVDVVLCNSVLDMYSKCGDLSDAVRVFEK 357
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M RSVV+WTSMI+GY REG D A++LF EME +G+ PD++T+TSILHACA +GSLE G
Sbjct: 358 MGRRSVVSWTSMIAGYVREGLSDKAIELFCEMETDGVIPDVYTITSILHACACSGSLEKG 417
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KD+H YI + + S+LFV N+LMDMYAKCGS+ +A VF + KD+V W+ MI GY +
Sbjct: 418 KDIHKYIREHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKN 477
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA++LF M+ +P+ +T +L AC
Sbjct: 478 CLPNEALELFSDMQ-RKFKPDSMTLASVLPAC 508
Score = 227 bits (579), Expect = 3e-57
Identities = 111/270 (41%), Positives = 178/270 (65%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ R V+SW ++I+GYV GL K +E+F EM GV D+ T+
Sbjct: 342 YSKCGDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGLSDKAIELFCEMETDGVIPDVYTI 401
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ GK IH Y I+ H + + + N+L+DMYAKCG + + +F M
Sbjct: 402 TSILHACACSGSLEKGKDIHKY-IREHDMDSSLFVCNSLMDMYAKCGSMEDADSVFSHMP 460
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ + A++LF +M+ + KPD T+ S+L ACAS +L+ G++
Sbjct: 461 MKDIVSWNTMIGGYSKNCLPNEALELFSDMQRK-FKPDSMTLASVLPACASLAALDRGQE 519
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H Y++R+G + +VANAL+DMY KCG + ARV+F+ I KD++ ++ +I GYG+HG
Sbjct: 520 IHGYLLRHGYFLDQYVANALVDMYVKCGVLILARVLFEMIPVKDLISYTVIIAGYGMHGF 579
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI F+ M + +EP+ ++F+ +L AC
Sbjct: 580 GKEAIAAFNEMTKAEIEPDSISFISILYAC 609
Score = 179 bits (455), Expect = 8e-43
Identities = 94/270 (34%), Positives = 155/270 (57%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y C + AR++FD L DR V WN +I+ Y +G+ +F +M GV+++ T
Sbjct: 140 YVHCGDLREARRVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTF 199
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+ A + + G+ +HGY K RF + ++ N+L+ Y K G + S+ ++F +
Sbjct: 200 SCVFKCFAALGCVREGEWVHGYLYKL-RFGSDSNVVNSLMAFYFKNGRVESARKVFDALR 258
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
ER VV+W SMIS Y G + +++FREM GI DL T+ ++L AC+ G++ G+
Sbjct: 259 ERDVVSWNSMISAYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMACSDCGNVVLGRV 318
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH Y ++ G ++ + N+++DMY+KCG + +A VF+++ + VV W++MI GY G
Sbjct: 319 VHGYAMKGGFDVDVVLCNSVLDMYSKCGDLSDAVRVFEKMGRRSVVSWTSMIAGYVREGL 378
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+AI+LF M+ GV P+ T +L AC
Sbjct: 379 SDKAIELFCEMETDGVIPDVYTITSILHAC 408
Score = 136 bits (342), Expect = 1e-29
Identities = 77/241 (31%), Positives = 134/241 (55%), Gaps = 3/241 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F + +D++SWN +I GY N LP + LE+FS+M+ D T+
Sbjct: 443 YAKCGSMEDADSVFSHMPMKDIVSWNTMIGGYSKNCLPNEALELFSDMQRK-FKPDSMTL 501
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
S+LPACA ++ + G+ IHGY ++ H + + + N L+DMY KCG L + +F +
Sbjct: 502 ASVLPACASLAALDRGQEIHGYLLR-HGYFLDQYVANALVDMYVKCGVLILARVLFEMIP 560
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ ++++T +I+GY G A+ F EM I+PD + SIL+AC+ +G ++ G
Sbjct: 561 VKDLISYTVIIAGYGMHGFGKEAIAAFNEMTKAEIEPDSISFISILYACSHSGLVQEGWR 620
Query: 549 VHDYIVRNGLQSNLFVAN--ALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVGYGL 719
D I+RN + + + ++D+ A+ G++ A + + D VW +++ G +
Sbjct: 621 FFD-IMRNDYKIEPMLEHYACMVDLLARTGNLTKAYKFINMMPIEPDATVWGSLLCGCRI 679
Query: 720 H 722
H
Sbjct: 680 H 680
Score = 129 bits (323), Expect = 2e-27
Identities = 71/217 (32%), Positives = 117/217 (53%)
Frame = +3
Query: 168 DVDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSV 347
D+D A S+L CA ++ GK +H + H N + + L+ MY CGDL +
Sbjct: 92 DLDSAAYCSVLELCAGNKSLKDGKRVHS-VLCEHGVNVDGYVGAKLVFMYVHCGDLREAR 150
Query: 348 QIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNG 527
++F +S+R V W MI+ YA+ V LF +M G++ + +T + + A+ G
Sbjct: 151 RVFDALSDRKVFLWNLMINEYAKVRDFREGVCLFGKMVECGVELNSYTFSCVFKCFAALG 210
Query: 528 SLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIV 707
+ G+ VH Y+ + S+ V N+LM Y K G + +AR VFD + +DVV W++MI
Sbjct: 211 CVREGEWVHGYLYKLRFGSDSNVVNSLMAFYFKNGRVESARKVFDALRERDVVSWNSMIS 270
Query: 708 GYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
Y +G + I++F M WSG++ + T + +L+AC
Sbjct: 271 AYVSNGAPEKGIEIFREMVWSGIDVDLATIINVLMAC 307
>ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
gi|462410132|gb|EMJ15466.1| hypothetical protein
PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 298 bits (763), Expect = 2e-78
Identities = 149/272 (54%), Positives = 201/272 (73%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K + + SARK+FDEL DRDVISWN++IS YV+NGL KG+EIF +M GVDVDLA
Sbjct: 165 AFYFKNRIIESARKVFDELSDRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLA 224
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T++++L AC++ N+ LG+A+H YAIK+ + M NN +LDMY+KCGDLSS+ Q+FGK
Sbjct: 225 TVINVLMACSDGGNLSLGRALHSYAIKTCLDMDIMFYNN-VLDMYSKCGDLSSATQVFGK 283
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M +RSVV+WTSMI+GY REG D A++LF EME + PD++T+TSILHACA NGSL+ G
Sbjct: 284 MGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTITSILHACACNGSLKKG 343
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
+D+H YI +G+ S+LFV N LMDMYAKCGS+ +A VF + KD+V W+ MI GY +
Sbjct: 344 RDIHKYIREHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKN 403
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF M+ +P+ +T +L AC
Sbjct: 404 CLPNEALKLFSEMQQKS-KPDGMTIASVLPAC 434
Score = 241 bits (615), Expect = 2e-61
Identities = 116/270 (42%), Positives = 181/270 (67%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + SA ++F ++ R V+SW ++I+GYV GL + +E+FSEM + V D+ T+
Sbjct: 268 YSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGLSDEAIELFSEMERNDVSPDVYTI 327
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ G+ IH Y I+ H + + + NTL+DMYAKCG + + +F M
Sbjct: 328 TSILHACACNGSLKKGRDIHKY-IREHGMDSSLFVCNTLMDMYAKCGSMEDAHSVFSSMP 386
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ + A+KLF EM+ + KPD T+ S+L ACAS +L G++
Sbjct: 387 VKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKS-KPDGMTIASVLPACASLAALNRGQE 445
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H +I+RNG S+ +VANAL+DMY KCG + AR++FD I KD++ W+ ++ GYG+HG
Sbjct: 446 IHGHILRNGYFSDRYVANALVDMYVKCGVLVLARLLFDIIPIKDLISWTVIVAGYGMHGF 505
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI F+ M+ SG++P+ ++F+ +L AC
Sbjct: 506 GSEAITAFNEMRKSGIKPDSISFISILYAC 535
Score = 175 bits (444), Expect = 2e-41
Identities = 89/270 (32%), Positives = 153/270 (56%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
+ KC + AR++FD+L + V WN +I+ Y +G+ +F +M+ G+ + T
Sbjct: 66 FVKCGDLREARRVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTF 125
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
IL + + + G+ +HGY K F + ++ N+L+ Y K + S+ ++F ++S
Sbjct: 126 SCILKCFSSLGYVREGEWVHGYLYKLG-FGSDNTVGNSLMAFYFKNRIIESARKVFDELS 184
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+R V++W SMIS Y G + V++FR+M G+ DL TV ++L AC+ G+L G+
Sbjct: 185 DRDVISWNSMISAYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMACSDGGNLSLGRA 244
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H Y ++ L ++ N ++DMY+KCG + +A VF ++ + VV W++MI GY G
Sbjct: 245 LHSYAIKTCLDMDIMFYNNVLDMYSKCGDLSSATQVFGKMGQRSVVSWTSMIAGYVREGL 304
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
EAI+LF M+ + V P+ T +L AC
Sbjct: 305 SDEAIELFSEMERNDVSPDVYTITSILHAC 334
Score = 139 bits (351), Expect = 1e-30
Identities = 77/241 (31%), Positives = 134/241 (55%), Gaps = 3/241 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F + +D++SWN +I GY N LP + L++FSEM+ D T+
Sbjct: 369 YAKCGSMEDAHSVFSSMPVKDIVSWNTMIGGYSKNCLPNEALKLFSEMQQKSKP-DGMTI 427
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
S+LPACA ++ + G+ IHG+ +++ F++ + N L+DMY KCG L + +F +
Sbjct: 428 ASVLPACASLAALNRGQEIHGHILRNGYFSDRY-VANALVDMYVKCGVLVLARLLFDIIP 486
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++WT +++GY G A+ F EM GIKPD + SIL+AC+ +G L+
Sbjct: 487 IKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIKPDSISFISILYACSHSGLLDEAWR 546
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVGYGL 719
D +RN + L ++D+ A+ G++ A +++ D +W +++ G +
Sbjct: 547 FFD-SMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDATIWGSLLCGCRI 605
Query: 720 H 722
H
Sbjct: 606 H 606
Score = 128 bits (321), Expect = 3e-27
Identities = 72/217 (33%), Positives = 121/217 (55%)
Frame = +3
Query: 168 DVDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSV 347
++DL S+L CA + ++ GK +H I ++ + L L+ M+ KCGDL +
Sbjct: 18 ELDLEGYCSVLELCAGLKSLQDGKRVHS-VICNNGAEVDGPLGAKLVFMFVKCGDLREAR 76
Query: 348 QIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNG 527
++F K+S V W MI+ YA+ + LFR+M+ GI+ + +T + IL +S G
Sbjct: 77 RVFDKLSNGKVFLWNLMINEYAKVRNFREGIHLFRKMQELGIQANSYTFSCILKCFSSLG 136
Query: 528 SLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIV 707
+ G+ VH Y+ + G S+ V N+LM Y K I +AR VFD +S++DV+ W++MI
Sbjct: 137 YVREGEWVHGYLYKLGFGSDNTVGNSLMAFYFKNRIIESARKVFDELSDRDVISWNSMIS 196
Query: 708 GYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
Y +G + +++F M GV+ + T + +L+AC
Sbjct: 197 AYVANGLAEKGVEIFRQMLSLGVDVDLATVINVLMAC 233
>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 640
Score = 298 bits (762), Expect = 2e-78
Identities = 142/272 (52%), Positives = 203/272 (74%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
SFY K +K+ +A ++FDELK+RD++SWN++ISG V+N LP KG+++F EM + GV DL
Sbjct: 243 SFYFKTRKIEAAYEVFDELKNRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLV 302
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+V++L ACA N LG+ +H +AIK+ + ++ M+ NTLLDMY+KCGDL++++++F K
Sbjct: 303 TLVNVLAACANSGNFPLGRVLHAFAIKA-QLDQRMTFVNTLLDMYSKCGDLNNAIRVFQK 361
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M ERSVV+WTS+I+GYAREG ++LF EME EG++PD FTVT++LHACA +GSLE G
Sbjct: 362 MGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTVTAVLHACACSGSLEIG 421
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KDVHDY+ N +Q + V N+LMDMYAKCGS+ +A +VF + NKD+V W+ MI GY +
Sbjct: 422 KDVHDYVKENNMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMPNKDIVSWNTMIGGYSKN 481
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+ +E + LF AM ++P+ T +L AC
Sbjct: 482 GRPNETLHLFVAMV-QELKPDGRTMACILPAC 512
Score = 197 bits (501), Expect = 4e-48
Identities = 96/234 (41%), Positives = 153/234 (65%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + +A ++F ++ +R V+SW ++I+GY GL +G+ +F EM GV D T+
Sbjct: 346 YSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGLSGEGIRLFHEMEREGVRPDNFTV 405
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
++L ACA ++ +GK +H Y +K + ++ + N+L+DMYAKCG + + +F +M
Sbjct: 406 TAVLHACACSGSLEIGKDVHDY-VKENNMQKDRIVCNSLMDMYAKCGSMEDANLVFLEMP 464
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ G+ + + LF M V+ +KPD T+ IL ACAS +L+ G++
Sbjct: 465 NKDIVSWNTMIGGYSKNGRPNETLHLFVAM-VQELKPDGRTMACILPACASLAALDRGRE 523
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVG 710
+H YI RNG +L VANAL+DMYAKCG++ AR+ FD I KD++ W+ MI G
Sbjct: 524 IHGYIQRNGCFDDLHVANALIDMYAKCGALALARLFFDMIPVKDLISWTVMIAG 577
Score = 173 bits (438), Expect = 8e-41
Identities = 87/270 (32%), Positives = 150/270 (55%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y C + R IFD++ + V WN ++SGY G + + +F +M G+ V+ T+
Sbjct: 144 YVNCGDIREGRVIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTV 203
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
IL A + ++ G+ +HGY +K F ++ N+L+ Y K + ++ ++F ++
Sbjct: 204 SCILKCFAALGSVKEGEWVHGYLLKLG-FGSYNTVVNSLISFYFKTRKIEAAYEVFDELK 262
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
R +V+W SMISG + +++F+EM G+ DL T+ ++L ACA++G+ G+
Sbjct: 263 NRDIVSWNSMISGTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAACANSGNFPLGRV 322
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H + ++ L + N L+DMY+KCG + NA VF ++ + VV W+++I GY G
Sbjct: 323 LHAFAIKAQLDQRMTFVNTLLDMYSKCGDLNNAIRVFQKMGERSVVSWTSLIAGYAREGL 382
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
E I LFH M+ GV P++ T +L AC
Sbjct: 383 SGEGIRLFHEMEREGVRPDNFTVTAVLHAC 412
Score = 134 bits (337), Expect = 4e-29
Identities = 79/217 (36%), Positives = 121/217 (55%)
Frame = +3
Query: 168 DVDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSV 347
++D T SIL CAE++++ GK +H + S F + + L L+ MY CGD+
Sbjct: 96 NIDSNTYCSILQLCAELNSLQEGKKVHSFISSSGIFVDGL-LGTKLVFMYVNCGDIREGR 154
Query: 348 QIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNG 527
IF K++ V W M+SGYA+ G + +V LFR+M GI+ + TV+ IL A+ G
Sbjct: 155 VIFDKIANEKVFLWNLMLSGYAKIGAFEESVYLFRKMLDLGIQVNSHTVSCILKCFAALG 214
Query: 528 SLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIV 707
S++ G+ VH Y+++ G S V N+L+ Y K I A VFD + N+D+V W++MI
Sbjct: 215 SVKEGEWVHGYLLKLGFGSYNTVVNSLISFYFKTRKIEAAYEVFDELKNRDIVSWNSMIS 274
Query: 708 GYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G + + I +F M + GV + VT V +L AC
Sbjct: 275 GTVANDLPEKGIQVFKEMLYLGVSFDLVTLVNVLAAC 311
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 297 bits (760), Expect = 4e-78
Identities = 146/272 (53%), Positives = 199/272 (73%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
SFY +K+ A+K+FDEL DRDVISWN++ISGYV NGL +G+EIF +M GVD+DLA
Sbjct: 294 SFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLA 353
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
TMV++ ACA + +LLGK +H Y+IK+ + E+ NNTLLDMY+KCGDL+S++++F +
Sbjct: 354 TMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFER 413
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M E++VV+WTSMI+GY REG D A+KLF EM+ G+ PD++ VTSIL+ACA NG+L+ G
Sbjct: 414 MDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSG 473
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VHDYI N L++N FV+NAL DMYAKCGS+ +A VF + KDV+ W+ MI GY +
Sbjct: 474 KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN 533
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF M+ +P+ T +L AC
Sbjct: 534 SLPNEALTLFAEMQRES-KPDGTTVACILPAC 564
Score = 240 bits (613), Expect = 4e-61
Identities = 115/270 (42%), Positives = 175/270 (64%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + SA ++F+ + ++ V+SW ++I+GYV GL +++F EM+ GV D+ +
Sbjct: 398 YSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAV 457
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA N+ GK +H Y I+ + ++N L DMYAKCG + + +F M
Sbjct: 458 TSILNACAINGNLKSGKIVHDY-IRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK 516
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
++ V++W +MI GY + + A+ LF EM+ E KPD TV IL ACAS +L+ G++
Sbjct: 517 KKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGRE 575
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H Y +RNG + +V NA++DMY KCG + AR +FD I NKD+V W+ MI GYG+HG
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI+ F+ M+ +G+EP++V+F+ +L AC
Sbjct: 636 GSEAINTFNQMRMTGIEPDEVSFISILYAC 665
Score = 164 bits (415), Expect = 4e-38
Identities = 92/271 (33%), Positives = 149/271 (54%), Gaps = 1/271 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y KC + R +FD+L + + WN +IS Y +G + + +F +M G+ + T
Sbjct: 195 YVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 254
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL A ++ + G+ +HG K FN ++ N+L+ Y + + ++F +++
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLG-FNSYNTVVNSLISFYFVGRKVRCAQKLFDELT 313
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+R V++W SMISGY + G D +++F +M V G+ DL T+ ++ ACA+ G+L GK
Sbjct: 314 DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKV 373
Query: 549 VHDYIVRNG-LQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHG 725
+H Y ++ L + N L+DMY+KCG + +A VF+R+ K VV W++MI GY G
Sbjct: 374 LHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREG 433
Query: 726 KGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
AI LF MK GV P+ +L AC
Sbjct: 434 LSDGAIKLFDEMKSRGVVPDVYAVTSILNAC 464
Score = 156 bits (395), Expect = 8e-36
Identities = 82/240 (34%), Positives = 138/240 (57%), Gaps = 2/240 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F +K +DVISWN +I GY N LP + L +F+EM+ D T+
Sbjct: 499 YAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKP-DGTTV 557
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++ + G+ IHGYA+++ ++E+ + N ++DMY KCG L + +F +
Sbjct: 558 ACILPACASLAALDKGREIHGYALRNG-YSEDKYVTNAVVDMYVKCGLLVLARSLFDMIP 616
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+WT MI+GY G A+ F +M + GI+PD + SIL+AC+ +G L+ G
Sbjct: 617 NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWK 676
Query: 549 VHDYIVRN-GLQSNLFVANALMDMYAKCGSIGNARVVFDRISNK-DVVVWSAMIVGYGLH 722
+ + + + ++ NL ++D+ A+ G++ A + K D +W A++ G +H
Sbjct: 677 IFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIH 736
Score = 126 bits (316), Expect = 1e-26
Identities = 74/215 (34%), Positives = 114/215 (53%)
Frame = +3
Query: 174 DLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQI 353
DL SIL CAE +I G+ + I+S + L L+ MY KCGDL +
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSI-IESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207
Query: 354 FGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSL 533
F K+SE + W MIS Y+ G ++ LF++M GIKP+ +T +SIL A+ +
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267
Query: 534 EHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGY 713
E G+ VH I + G S V N+L+ Y + A+ +FD ++++DV+ W++MI GY
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGY 327
Query: 714 GLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+G I++F M GV+ + T V + +AC
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVAC 362
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 295 bits (755), Expect = 1e-77
Identities = 146/272 (53%), Positives = 200/272 (73%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K +++ ARK+FDEL +RDVISWN++ISGYV+NG KG+E+F +M + GVD+DLA
Sbjct: 147 AFYLKIRRVDVARKLFDELSNRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLA 206
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
TMVSIL ACA ++ LG+A+HG +K+ + + + NTLLDMYAKCG L ++ +F
Sbjct: 207 TMVSILQACANCGDVSLGRAVHGSGVKAC-VHWKTTFCNTLLDMYAKCGVLDGAILVFDL 265
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
MS R+VVTWTS+I+ YAREG D A++LF EM+ EG+ PD+FT+T++LHACA NGSLE+G
Sbjct: 266 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 325
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KDVH+YI N +QSN+FV NALMDMYAKCGS+ +A VF + KD++ W+ MI GY +
Sbjct: 326 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 385
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF M ++P+ T +L AC
Sbjct: 386 SLPNEALSLFGDMVLE-MKPDGTTLACILPAC 416
Score = 223 bits (569), Expect = 5e-56
Identities = 110/270 (40%), Positives = 173/270 (64%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC + A +FD + R V++W ++I+ Y GL + + +F EM GV D+ T+
Sbjct: 250 YAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTI 309
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
++L ACA ++ GK +H Y I+ + + + N L+DMYAKCG + + +F +M
Sbjct: 310 TTVLHACACNGSLENGKDVHNY-IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP 368
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +MI GY++ + A+ LF +M +E +KPD T+ IL ACAS SL+ GK+
Sbjct: 369 VKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKE 427
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH +I+RNG S+ VANAL+DMY KCG AR++FD I KD++ W+ MI GYG+HG
Sbjct: 428 VHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGF 487
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+ AI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 488 GNNAITTFNEMRQAGIEPDEVSFISILYAC 517
Score = 170 bits (430), Expect = 7e-40
Identities = 94/270 (34%), Positives = 149/270 (55%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y C + R IFD++++ V WN +++GY G + + +F +M GV+V+ T+
Sbjct: 48 YVTCGDLREGRLIFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTV 107
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+L A + ++ GK +HG+ +K ++ N+L+ Y K + + ++F ++S
Sbjct: 108 SCVLKCFAALGSVKEGKWVHGFLLKLG-LGSYNAVVNSLIAFYLKIRRVDVARKLFDELS 166
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
R V++W SMISGY G + V+LF++M G+ DL T+ SIL ACA+ G + G+
Sbjct: 167 NRDVISWNSMISGYVANGFSEKGVELFKKMLYLGVDMDLATMVSILQACANCGDVSLGRA 226
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH V+ + N L+DMYAKCG + A +VFD +S + VV W+++I Y G
Sbjct: 227 VHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGL 286
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
EAI LFH M GV P+ T +L AC
Sbjct: 287 SDEAIRLFHEMDREGVSPDIFTITTVLHAC 316
Score = 140 bits (353), Expect = 6e-31
Identities = 77/240 (32%), Positives = 132/240 (55%), Gaps = 2/240 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F E+ +D+ISWN +I GY N LP + L +F +M + D T+
Sbjct: 351 YAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTL 409
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++++ GK +HG+ +++ F+++ + N L+DMY KCG + +F +
Sbjct: 410 ACILPACASLASLDRGKEVHGHILRNGFFSDQQ-VANALVDMYVKCGVPVLARLLFDMIP 468
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ ++TWT MI+GY G + A+ F EM GI+PD + SIL+AC+ +G L+ G
Sbjct: 469 TKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWR 528
Query: 549 VHDYIVRN-GLQSNLFVANALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIVGYGLH 722
+ + ++ L ++D+ A+ G + A + + D +W A++ G +H
Sbjct: 529 FFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIH 588
Score = 135 bits (340), Expect = 2e-29
Identities = 76/216 (35%), Positives = 122/216 (56%)
Frame = +3
Query: 171 VDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQ 350
++ T SIL AE+ ++ GK +H + I S + + L + L+ MY CGDL
Sbjct: 1 IESRTCCSILQLSAELKSLQDGKKVHSF-ICSSGISIDSVLGSKLVFMYVTCGDLREGRL 59
Query: 351 IFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGS 530
IF K+ V W M++GY + G +V LFR+M G++ + TV+ +L A+ GS
Sbjct: 60 IFDKIRNEKVFLWNLMMNGYTKIGDFKESVSLFRQMLDLGVEVNSHTVSCVLKCFAALGS 119
Query: 531 LEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVG 710
++ GK VH ++++ GL S V N+L+ Y K + AR +FD +SN+DV+ W++MI G
Sbjct: 120 VKEGKWVHGFLLKLGLGSYNAVVNSLIAFYLKIRRVDVARKLFDELSNRDVISWNSMISG 179
Query: 711 YGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
Y +G + ++LF M + GV+ + T V +L AC
Sbjct: 180 YVANGFSEKGVELFKKMLYLGVDMDLATMVSILQAC 215
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 288 bits (738), Expect = 1e-75
Identities = 144/272 (52%), Positives = 196/272 (72%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K K+ SA ++FD+L DRDVISWN++ISGYVSNGL +GL I+ +M + G+DVDLA
Sbjct: 243 AFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLA 302
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T++S+L CA + LGKA+H AIKS F ++ +NTLLDMY+KCGDL ++++F K
Sbjct: 303 TIISVLVGCANSGTLSLGKAVHSLAIKSS-FERRINFSNTLLDMYSKCGDLDGALRVFEK 361
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
M ER+VV+WTSMI+GY R+G D A+ L ++ME EG+K D+ +TSILHACA +GSL++G
Sbjct: 362 MGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 421
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
KDVHDYI N + SNLFV NALMDMYAKCGS+ A VF + KD++ W+ M+ GY +
Sbjct: 422 KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKN 481
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA+ F AM ++P+ T +L AC
Sbjct: 482 CLPNEALKTFAAM-LKELKPDSRTMACILPAC 512
Score = 235 bits (599), Expect = 2e-59
Identities = 112/270 (41%), Positives = 178/270 (65%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ +R+V+SW ++I+GY +G + + +M GV +D+ +
Sbjct: 346 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAI 405
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ GK +H Y IK++ + + N L+DMYAKCG + + +F M
Sbjct: 406 TSILHACARSGSLDNGKDVHDY-IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 464
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +M+ GY++ + A+K F M E +KPD T+ IL ACAS +LE GK+
Sbjct: 465 VKDIISWNTMVGGYSKNCLPNEALKTFAAMLKE-LKPDSRTMACILPACASLSALERGKE 523
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H YI+RNG S+ VANAL+D+Y KCG +G AR++FD I +KD+V W+ MI GYG+HG
Sbjct: 524 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 583
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+EAI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 584 GNEAIATFNEMRDAGIEPDEVSFISILYAC 613
Score = 170 bits (430), Expect = 7e-40
Identities = 89/272 (32%), Positives = 153/272 (56%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
SFY+ C + R++FD ++ ++V WN ++S Y G + + +F M G++V+
Sbjct: 142 SFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEVNSY 201
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T +L A + ++ G+ +HGY +K F S+ N+L+ Y K S+ ++F K
Sbjct: 202 TFSCVLKCFAALGSLKEGECVHGYLLKLG-FGSCNSVVNSLIAFYFKGKRPESASELFDK 260
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
+ +R V++W SMISGY G + + ++++M GI DL T+ S+L CA++G+L G
Sbjct: 261 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG 320
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VH +++ + + +N L+DMY+KCG + A VF+++ ++VV W++MI GY
Sbjct: 321 KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRD 380
Query: 723 GKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G AI L M+ GV+ + V +L AC
Sbjct: 381 GWSDGAIILLQQMEKEGVKLDVVAITSILHAC 412
Score = 145 bits (365), Expect = 2e-32
Identities = 80/237 (33%), Positives = 132/237 (55%), Gaps = 3/237 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F + +D+ISWN ++ GY N LP + L+ F+ M + D TM
Sbjct: 447 YAKCGSMEGANSVFSTMVVKDIISWNTMVGGYSKNCLPNEALKTFAAM-LKELKPDSRTM 505
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA +S + GK IHGY +++ ++ + + N L+D+Y KCG L + +F +
Sbjct: 506 ACILPACASLSALERGKEIHGYILRNG-YSSDRHVANALVDLYVKCGVLGLARLLFDMIP 564
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+WT MI+GY G + A+ F EM GI+PD + SIL+AC+ +G LE G
Sbjct: 565 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 624
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
YI++N ++ L ++D+ ++ G++ A + + D +W A++ G
Sbjct: 625 FF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 680
Score = 127 bits (319), Expect = 5e-27
Identities = 74/252 (29%), Positives = 135/252 (53%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKA 242
D V +NA I + G +E+ + S +++ T S+L CA + ++ GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELVCMCQKS--ELETKTYGSVLQLCAGLKSLTDGKK 120
Query: 243 IHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYAREG 422
+H IKS+ + +L L+ YA CGDL ++F M +++V W M+S YA+ G
Sbjct: 121 VHSI-IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 423 QCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVAN 602
++ LF+ M +GI+ + +T + +L A+ GSL+ G+ VH Y+++ G S V N
Sbjct: 180 DFKESICLFKIMVEKGIEVNSYTFSCVLKCFAALGSLKEGECVHGYLLKLGFGSCNSVVN 239
Query: 603 ALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEP 782
+L+ Y K +A +FD++ ++DV+ W++MI GY +G + ++ M + G++
Sbjct: 240 SLIAFYFKGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDV 299
Query: 783 NDVTFVGLLLAC 818
+ T + +L+ C
Sbjct: 300 DLATIISVLVGC 311
>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140652|ref|XP_004504289.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 879
Score = 277 bits (708), Expect = 4e-72
Identities = 135/270 (50%), Positives = 195/270 (72%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y K + SA +FDEL DRDV+SWN++I+G V NG GLEIF +M GV VDL T+
Sbjct: 250 YFKFGGVESAHNLFDELSDRDVVSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTL 309
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
VS+L ACA + N+ LG+A+H + +K+ F+ E+ +NTLLDMY+KCG+L+ + ++F KM
Sbjct: 310 VSVLVACANIGNLSLGRALHAFGVKAP-FSGEVVFSNTLLDMYSKCGNLNGATEVFVKMG 368
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
E ++V+WTS+I+ Y REG D A+ LF EM+ +G++PD++TVTSI+HACA + SL+ G+D
Sbjct: 369 ETTIVSWTSIIAAYVREGLYDDAIGLFDEMQSKGVRPDIYTVTSIVHACACSNSLDKGRD 428
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH Y+++N + SNL VANALM+MYAKCGS+ AR+VF +I KD+V W+ MI GY +
Sbjct: 429 VHSYVIKNSMVSNLPVANALMNMYAKCGSMEEARLVFSQIPAKDIVSWNTMIGGYSKNSL 488
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+ A++LF M ++P+D+T +L AC
Sbjct: 489 PNGALELFSDMV-EQLKPDDITMACVLPAC 517
Score = 221 bits (562), Expect = 3e-55
Identities = 106/270 (39%), Positives = 177/270 (65%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F ++ + ++SW +II+ YV GL + +F EM+ GV D+ T+
Sbjct: 351 YSKCGNLNGATEVFVKMGETTIVSWTSIIAAYVREGLYDDAIGLFDEMQSKGVRPDIYTV 410
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SI+ ACA +++ G+ +H Y IK+ + + + N L++MYAKCG + + +F ++
Sbjct: 411 TSIVHACACSNSLDKGRDVHSYVIKNSMVSN-LPVANALMNMYAKCGSMEEARLVFSQIP 469
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ + A++LF +M VE +KPD T+ +L ACA +L+ G++
Sbjct: 470 AKDIVSWNTMIGGYSKNSLPNGALELFSDM-VEQLKPDDITMACVLPACAGLAALDKGRE 528
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H +I+R G S+L VA AL+DMYAKCG + A+++FD I KD++ W+ MI GYG+HG
Sbjct: 529 IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQILFDMIPKKDLISWTVMIAGYGMHGF 588
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+EAI F+ M+ +G+EP++ +F +L AC
Sbjct: 589 GNEAISTFNKMRIAGIEPDESSFTAILNAC 618
Score = 159 bits (401), Expect = 2e-36
Identities = 86/270 (31%), Positives = 146/270 (54%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y C + R+IFDE+ + V WN ++S Y G + L +F++M+ G+ D T
Sbjct: 149 YVNCGDLVKGREIFDEILNDKVFLWNLMMSEYAKIGNYRESLGLFNKMQKLGIAGDSYTF 208
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+L + + K +HGY +K F ++ N+L+ Y K G + S+ +F ++S
Sbjct: 209 TCVLKCFTALGKVKECKRVHGYVLKLG-FGSSTAVVNSLIAAYFKFGGVESAHNLFDELS 267
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+R VV+W SMI+G G +++F +M + G+ DL T+ S+L ACA+ G+L G+
Sbjct: 268 DRDVVSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTLVSVLVACANIGNLSLGRA 327
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H + V+ + +N L+DMY+KCG++ A VF ++ +V W+++I Y G
Sbjct: 328 LHAFGVKAPFSGEVVFSNTLLDMYSKCGNLNGATEVFVKMGETTIVSWTSIIAAYVREGL 387
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+AI LF M+ GV P+ T ++ AC
Sbjct: 388 YDDAIGLFDEMQSKGVRPDIYTVTSIVHAC 417
Score = 142 bits (358), Expect = 1e-31
Identities = 78/243 (32%), Positives = 139/243 (57%), Gaps = 3/243 (1%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+ Y+KC M AR +F ++ +D++SWN +I GY N LP LE+FS+M + D
Sbjct: 450 NMYAKCGSMEEARLVFSQIPAKDIVSWNTMIGGYSKNSLPNGALELFSDM-VEQLKPDDI 508
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
TM +LPACA ++ + G+ IHG+ ++ F++ + + L+DMYAKCG L + +F
Sbjct: 509 TMACVLPACAGLAALDKGREIHGHILRRGYFSD-LHVACALVDMYAKCGLLVLAQILFDM 567
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
+ ++ +++WT MI+GY G + A+ F +M + GI+PD + T+IL+AC+ +G L G
Sbjct: 568 IPKKDLISWTVMIAGYGMHGFGNEAISTFNKMRIAGIEPDESSFTAILNACSHSGLLNEG 627
Query: 543 KDVHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRISNK-DVVVWSAMIVGY 713
+ +RN ++ L ++D+ + G++ A + + K + +W A++ G
Sbjct: 628 WRFFN-SMRNECSIEPKLEHYACMVDLLGRAGNLSKAYKFIESMPIKPNATIWGALLSGC 686
Query: 714 GLH 722
+H
Sbjct: 687 RIH 689
Score = 123 bits (309), Expect = 7e-26
Identities = 75/225 (33%), Positives = 122/225 (54%)
Frame = +3
Query: 144 SEMRFSGVDVDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAK 323
S +R + ++ L T S+L CAE ++ GK IH + I S + +L L+ MY
Sbjct: 93 SLIRSTRHELGLNTYCSVLQLCAERKSLEDGKRIH-FIIVSKGIPIKGALGAKLVFMYVN 151
Query: 324 CGDLSSSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSI 503
CGDL +IF ++ V W M+S YA+ G ++ LF +M+ GI D +T T +
Sbjct: 152 CGDLVKGREIFDEILNDKVFLWNLMMSEYAKIGNYRESLGLFNKMQKLGIAGDSYTFTCV 211
Query: 504 LHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDV 683
L + G ++ K VH Y+++ G S+ V N+L+ Y K G + +A +FD +S++DV
Sbjct: 212 LKCFTALGKVKECKRVHGYVLKLGFGSSTAVVNSLIAAYFKFGGVESAHNLFDELSDRDV 271
Query: 684 VVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
V W++MI G ++G +++F M GV + T V +L+AC
Sbjct: 272 VSWNSMINGCVVNGFSRNGLEIFIQMLILGVGVDLTTLVSVLVAC 316
>ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Capsella rubella]
gi|482551147|gb|EOA15340.1| hypothetical protein
CARUB_v10004110mg [Capsella rubella]
Length = 872
Score = 276 bits (706), Expect = 7e-72
Identities = 139/273 (50%), Positives = 199/273 (72%), Gaps = 1/273 (0%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K +++ SARK+FDE+ +RDVISWN+II+GYVSNGL +GL +F +M SGV++DLA
Sbjct: 239 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEQGLSVFVQMLVSGVEIDLA 298
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+VS+ ACA+ I LG+A+HG+ +K+ F+ E NTLLDMY+KCGDL S+ +F +
Sbjct: 299 TIVSVFAACADSRLISLGRAVHGFGMKAC-FSREDRFCNTLLDMYSKCGDLDSAKAVFTE 357
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
MS+RSVV++TSMI+GYAREG AVKLF EME EGI PD++TVT++L+ CA N L+ G
Sbjct: 358 MSDRSVVSYTSMIAGYAREGLAGEAVKLFGEMEKEGISPDVYTVTAVLNCCARNRLLDEG 417
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VH++I N + ++FV+NALMDMYAKCGS+ A +VF + +D++ W+ +I GY +
Sbjct: 418 KRVHEWIKENDMGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVRDIISWNTVIGGYSKN 477
Query: 723 GKGHEAIDLFH-AMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF+ ++ P++ T +L AC
Sbjct: 478 CYANEALSLFNLLLEEKRFSPDERTVACVLPAC 510
Score = 228 bits (582), Expect = 2e-57
Identities = 110/271 (40%), Positives = 179/271 (66%), Gaps = 1/271 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + SA+ +F E+ DR V+S+ ++I+GY GL + +++F EM G+ D+ T+
Sbjct: 342 YSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGLAGEAVKLFGEMEKEGISPDVYTV 401
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
++L CA + GK +H + IK + ++ ++N L+DMYAKCG + + +F +M
Sbjct: 402 TAVLNCCARNRLLDEGKRVHEW-IKENDMGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 460
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREM-EVEGIKPDLFTVTSILHACASNGSLEHGK 545
R +++W ++I GY++ + A+ LF + E + PD TV +L ACAS + + G+
Sbjct: 461 VRDIISWNTVIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 520
Query: 546 DVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHG 725
++H YI+RNG S+ VAN+L+DMYAKCG++ AR++FD I++KD+V W+ MI GYG+HG
Sbjct: 521 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARMLFDDIASKDLVSWTVMIAGYGMHG 580
Query: 726 KGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI LF+ M+ +G+E ++++FV LL AC
Sbjct: 581 FGKEAIALFNQMREAGIEADEISFVSLLYAC 611
Score = 163 bits (413), Expect = 6e-38
Identities = 83/270 (30%), Positives = 151/270 (55%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+ C + A ++FD++K + WN +++ +G + +F +M GV++D T
Sbjct: 140 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSLGVEMDSYTF 199
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
I + + + ++ G+ +HGY +KS F + S+ N+L+ Y K + S+ ++F +M+
Sbjct: 200 SCISKSFSSLRSVNGGEQLHGYILKSG-FGDRNSVGNSLVAFYLKNQRVDSARKVFDEMT 258
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
ER V++W S+I+GY G + + +F +M V G++ DL T+ S+ ACA + + G+
Sbjct: 259 ERDVISWNSIINGYVSNGLAEQGLSVFVQMLVSGVEIDLATIVSVFAACADSRLISLGRA 318
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH + ++ N L+DMY+KCG + +A+ VF +S++ VV +++MI GY G
Sbjct: 319 VHGFGMKACFSREDRFCNTLLDMYSKCGDLDSAKAVFTEMSDRSVVSYTSMIAGYAREGL 378
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
EA+ LF M+ G+ P+ T +L C
Sbjct: 379 AGEAVKLFGEMEKEGISPDVYTVTAVLNCC 408
Score = 143 bits (361), Expect = 7e-32
Identities = 83/245 (33%), Positives = 139/245 (56%), Gaps = 7/245 (2%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFS----EMRFSGVDVD 176
Y+KC M A +F E++ RD+ISWN +I GY N + L +F+ E RFS D
Sbjct: 443 YAKCGSMQEAELVFSEMRVRDIISWNTVIGGYSKNCYANEALSLFNLLLEEKRFSP---D 499
Query: 177 LATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIF 356
T+ +LPACA +S G+ IHGY +++ F++ + N+L+DMYAKCG L + +F
Sbjct: 500 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLARMLF 558
Query: 357 GKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLE 536
++ + +V+WT MI+GY G A+ LF +M GI+ D + S+L+AC+ +G ++
Sbjct: 559 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMREAGIEADEISFVSLLYACSHSGLVD 618
Query: 537 HGKDVHDYIVRNGLQSNLFVAN--ALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIV 707
G + + I+R+ + V + ++DM A+ G++ A R + + D +W A++
Sbjct: 619 EGWRIFN-IMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLC 677
Query: 708 GYGLH 722
G +H
Sbjct: 678 GCRIH 682
Score = 124 bits (310), Expect = 5e-26
Identities = 73/253 (28%), Positives = 134/253 (52%), Gaps = 1/253 (0%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGV-DVDLATMVSILPACAEMSNILLGK 239
DR N + Y +G +++ +R SG D+D T+ S+L CA+ ++ GK
Sbjct: 59 DRSATDANTRLRRYCESGNLESAVKL---LRVSGKWDIDPRTLCSVLQLCADSKSLKGGK 115
Query: 240 AIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYARE 419
+ + I+ + F + SL + L MY CGDL + ++F ++ + W +++ A+
Sbjct: 116 EVDSF-IRRNGFVIDSSLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKS 174
Query: 420 GQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVA 599
G ++ LF++M G++ D +T + I + +S S+ G+ +H YI+++G V
Sbjct: 175 GDFSGSIGLFKKMMSLGVEMDSYTFSCISKSFSSLRSVNGGEQLHGYILKSGFGDRNSVG 234
Query: 600 NALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVE 779
N+L+ Y K + +AR VFD ++ +DV+ W+++I GY +G + + +F M SGVE
Sbjct: 235 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEQGLSVFVQMLVSGVE 294
Query: 780 PNDVTFVGLLLAC 818
+ T V + AC
Sbjct: 295 IDLATIVSVFAAC 307
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 275 bits (704), Expect = 1e-71
Identities = 137/266 (51%), Positives = 188/266 (70%)
Frame = +3
Query: 21 KKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSIL 200
+++ SARK+FDEL DRDVISWN++ISGYVSNGL KGL++F +M G++ DLATMVS+
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV- 257
Query: 201 PACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSV 380
E++LNN LLDMY+K G+L+S++Q+F M ERSV
Sbjct: 258 ---------------------------ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 290
Query: 381 VTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDY 560
V+WTSMI+GYAREG D++V+LF EME E + P+ T+ IL ACAS +LE G+++H +
Sbjct: 291 VSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGH 350
Query: 561 IVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEA 740
I+RNG + VANAL+DMY KCG++G AR++FD I KD+V W+ MI GYG+HG G EA
Sbjct: 351 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEA 410
Query: 741 IDLFHAMKWSGVEPNDVTFVGLLLAC 818
I F+ M+ SG+EP++V+F+ +L AC
Sbjct: 411 IAAFNEMRNSGIEPDEVSFISILYAC 436
Score = 135 bits (341), Expect = 1e-29
Identities = 75/236 (31%), Positives = 129/236 (54%), Gaps = 2/236 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSK + SA ++F+ + +R V+SW ++I+GY GL + +F EM + + TM
Sbjct: 269 YSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITM 328
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA ++ + G+ IHG+ +++ F+ + + N L+DMY KCG L + +F +
Sbjct: 329 ACILPACASLAALERGQEIHGHILRNG-FSLDRHVANALVDMYLKCGALGLARLLFDMIP 387
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
E+ +V+WT MI+GY G A+ F EM GI+PD + SIL+AC+ +G L+ G
Sbjct: 388 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 447
Query: 549 VHDYIVRN-GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
+ + N ++ ++D+ A+ G++ A + D +W A++ G
Sbjct: 448 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503
Score = 124 bits (310), Expect = 5e-26
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 22/277 (7%)
Frame = +3
Query: 54 ELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILL 233
E D + +N I + G + +E+ ++ D++L T S+L CA++ +I
Sbjct: 62 ETIDCKITDYNIEICRFCELGNLRRAMELINQS--PKPDLELRTYCSVLQLCADLKSIQD 119
Query: 234 GKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYA 413
G+ IH I+S+ + L + L+ MY CGDL +IF K++ V W +++GYA
Sbjct: 120 GRRIHSI-IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYA 178
Query: 414 REGQCDIAVKLFREMEVEGIK--------------PDLFTVTSILHACASNGSLEHGKDV 551
+ G ++ LF+ M GI+ D+ + S++ SNG E G D+
Sbjct: 179 KIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDL 238
Query: 552 HDYIVRNGLQSN--------LFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIV 707
+ ++ G+ ++ L + N L+DMY+K G++ +A VF+ + + VV W++MI
Sbjct: 239 FEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 298
Query: 708 GYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
GY G ++ LFH M+ + PN +T +L AC
Sbjct: 299 GYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPAC 335
Score = 70.1 bits (170), Expect = 9e-10
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Frame = +3
Query: 309 DMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLF 488
++Y C + +SV + + + + + I + G A++L + KPDL
Sbjct: 46 NLYHSCATIGTSV-LPSETIDCKITDYNIEICRFCELGNLRRAMELINQSP----KPDLE 100
Query: 489 --TVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFD 662
T S+L CA S++ G+ +H I N ++ + + + L+ MY CG + R +FD
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160
Query: 663 RISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGV 776
+++N+ V +W+ ++ GY G E++ LF M+ G+
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI 198
>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 908
Score = 275 bits (703), Expect = 1e-71
Identities = 133/270 (49%), Positives = 197/270 (72%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y K + SA +FDEL + DV+SWN++I+G V NG GLEIF +M GV+VDL T+
Sbjct: 240 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTL 299
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
VS+L ACA + N+ LG+A+HG+ +K+ F+EE+ +NTLLDMY+KCG+L+ + ++F KM
Sbjct: 300 VSVLVACANIGNLSLGRALHGFGVKAC-FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMG 358
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ ++V+WTS+I+ Y REG A+ LF EM+ +G++PD++TVTSI+HACA + SL+ G+D
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD 418
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH Y+++NG+ SNL V NAL++MYAKCGS+ AR+VF +I KD+V W+ MI GY +
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+EA++LF M+ +P+D+T +L AC
Sbjct: 479 PNEALELFLDMQ-KQFKPDDITMACVLPAC 507
Score = 219 bits (559), Expect = 7e-55
Identities = 107/270 (39%), Positives = 175/270 (64%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F ++ D ++SW +II+ YV GL + +F EM+ GV D+ T+
Sbjct: 341 YSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 400
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SI+ ACA S++ G+ +H Y IK+ + + N L++MYAKCG + + +F K+
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+W +MI GY++ + A++LF +M+ + KPD T+ +L ACA +L+ G++
Sbjct: 460 VKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGRE 518
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H +I+R G S+L VA AL+DMYAKCG + A+++FD I KD++ W+ MI GYG+HG
Sbjct: 519 IHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGF 578
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+EAI F+ M+ +G+EP++ +F +L AC
Sbjct: 579 GNEAISTFNEMRIAGIEPDESSFSAILNAC 608
Score = 159 bits (401), Expect = 2e-36
Identities = 86/270 (31%), Positives = 147/270 (54%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y C + RKIFD++ + V WN ++S Y G + + +F +M+ GV + T
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+L A + + K +HGY +K F ++ N+L+ Y K G + S+ +F ++S
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLG-FGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 257
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
E VV+W SMI+G G +++F +M + G++ DL T+ S+L ACA+ G+L G+
Sbjct: 258 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRA 317
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H + V+ + +N L+DMY+KCG++ A VF ++ + +V W+++I Y G
Sbjct: 318 LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGL 377
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
+AI LF M+ GV P+ T ++ AC
Sbjct: 378 YSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 407
Score = 141 bits (356), Expect = 3e-31
Identities = 77/242 (31%), Positives = 139/242 (57%), Gaps = 2/242 (0%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+ Y+KC + AR +F ++ +D++SWN +I GY N LP + LE+F +M+ D+
Sbjct: 440 NMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDI- 498
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
TM +LPACA ++ + G+ IHG+ ++ F++ + + L+DMYAKCG L + +F
Sbjct: 499 TMACVLPACAGLAALDKGREIHGHILRRGYFSD-LHVACALVDMYAKCGLLVLAQLLFDM 557
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
+ ++ +++WT MI+GY G + A+ F EM + GI+PD + ++IL+AC+ +G L G
Sbjct: 558 IPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG 617
Query: 543 -KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNK-DVVVWSAMIVGYG 716
K + G++ L ++D+ A+ G++ A + + K D +W ++ G
Sbjct: 618 WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 677
Query: 717 LH 722
+H
Sbjct: 678 IH 679
Score = 130 bits (326), Expect = 8e-28
Identities = 78/245 (31%), Positives = 132/245 (53%)
Frame = +3
Query: 84 NAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKAIHGYAIK 263
NA I+ + G +E+ ++ + ++ L + S+L CAE ++ GK +H I
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSK--SYELGLNSYCSVLQLCAEKKSLEDGKRVHSVII- 121
Query: 264 SHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVK 443
S+ + + +L L+ MY CGDL +IF K+ V W ++S YA+ G +V
Sbjct: 122 SNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVS 181
Query: 444 LFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYA 623
LF++M+ G+ + +T T +L A+ G ++ K VH Y+++ G SN V N+L+ Y
Sbjct: 182 LFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYF 241
Query: 624 KCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVG 803
K G + +A +FD +S DVV W++MI G ++G +++F M GVE + T V
Sbjct: 242 KFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVS 301
Query: 804 LLLAC 818
+L+AC
Sbjct: 302 VLVAC 306
>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 275 bits (703), Expect = 1e-71
Identities = 130/228 (57%), Positives = 175/228 (76%)
Frame = +3
Query: 21 KKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSIL 200
K+ SA ++FD+L DRDVISWN++ISGYVSNGL +GLEI+ +M + G+DVDLAT++S+L
Sbjct: 199 KRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVL 258
Query: 201 PACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSV 380
CA + LGKA+H AIKS F ++ +NTLLDMY+KCGDL ++++F KM ER+V
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKS-TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 381 VTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDY 560
V+WTSMI+GY R+G+ D A++L ++ME EG+K D+ TSILHACA +GSL++GKDVHDY
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDY 377
Query: 561 IVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMI 704
I N ++SNLFV NALMDMY KCGS+ A VF + KD++ W+ MI
Sbjct: 378 IKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI 425
Score = 216 bits (551), Expect = 6e-54
Identities = 105/270 (38%), Positives = 165/270 (61%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ +R+V+SW ++I+GY +G + + +M GV +D+
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVAT 355
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ GK +H Y IK++ + + N L+DMY KCG + + +F M
Sbjct: 356 TSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV 414
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +MI +KPD T+ IL ACAS +LE GK+
Sbjct: 415 VKDIISWNTMIG---------------------ELKPDSRTMACILPACASLSALERGKE 453
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H YI+RNG S+ VANAL+D+Y KCG +G AR++FD I +KD+V W+ MI GYG+HG
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGY 513
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+EAI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYAC 543
Score = 134 bits (336), Expect = 5e-29
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 51/303 (16%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKA 242
DR V +NA I + G +E+ + S +++ T S+L CA ++ GK
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVCMCQKS--ELETKTYSSVLQLCAGSKSLTDGKK 120
Query: 243 IHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLS---------------------------- 338
+H IKS+ + L L+ +YA CGDL
Sbjct: 121 VHSI-IKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 339 -----------------------SSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKLF 449
S+ ++F K+ +R V++W SMISGY G + ++++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239
Query: 450 REMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKC 629
++M GI DL T+ S+L CA++G+L GK VH +++ + + +N L+DMY+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299
Query: 630 GSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLL 809
G + A VF+++ ++VV W++MI GY G+ AI L M+ GV+ + V +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359
Query: 810 LAC 818
AC
Sbjct: 360 HAC 362
Score = 124 bits (311), Expect = 4e-26
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 3/237 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M A +F + +D+ISWN +I + D TM
Sbjct: 397 YTKCGSMDGANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTM 435
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
ILPACA +S + GK IHGY +++ ++ + + N L+D+Y KCG L + +F +
Sbjct: 436 ACILPACASLSALERGKEIHGYILRNG-YSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+WT MISGY G + A+ F EM GI+PD + SIL+AC+ +G LE G
Sbjct: 495 SKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
YI++N ++ L ++D+ ++ G++ A + + D +W A++ G
Sbjct: 555 FF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 274 bits (701), Expect = 2e-71
Identities = 131/228 (57%), Positives = 176/228 (77%)
Frame = +3
Query: 21 KKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSIL 200
K+ SA ++FD+L DRDVISWN++ISGYVSNGL +GL I+ +M + G+DVDLAT++S+L
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 201 PACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSV 380
CA + LGKA+H AIKS F ++ +NTLLDMY+KCGDL ++++F KM ER+V
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSS-FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 381 VTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDY 560
V+WTSMI+GY R+G+ D A+KL ++ME EG+K D+ +TSILHACA +GSL++GKDVHDY
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377
Query: 561 IVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMI 704
I N ++SNLFV NALMDMYAKCGS+ A VF + KD++ W+ MI
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI 425
Score = 220 bits (560), Expect = 6e-55
Identities = 105/270 (38%), Positives = 169/270 (62%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ +R+V+SW ++I+GY +G +++ +M GV +D+ +
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAI 355
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ GK +H Y IK++ + + N L+DMYAKCG + ++ +F M
Sbjct: 356 TSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +MI +KPD T+ +L ACAS +LE GK+
Sbjct: 415 VKDIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKE 453
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H YI+RNG S+ VANAL+D+Y KCG +G AR++FD I +KD+V W+ MI GYG+HG
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+EAI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYAC 543
Score = 133 bits (335), Expect = 7e-29
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 51/303 (16%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKA 242
D V +NA I + G +E+ + S +++ T S+L CA + + GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCQKS--ELETKTYGSVLQLCAGLKSFTDGKK 120
Query: 243 IHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLS---------------------------- 338
+H IKS+ + +L L+ YA CGDL
Sbjct: 121 VHSI-IKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 339 -----------------------SSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKLF 449
S+ ++F K+ +R V++W SMISGY G + + ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 450 REMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKC 629
++M GI DL T+ S+L CA++G+L GK VH +++ + + +N L+DMY+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299
Query: 630 GSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLL 809
G + A VF+++ ++VV W++MI GY G+ AI L M+ GV+ + V +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359
Query: 810 LAC 818
AC
Sbjct: 360 HAC 362
Score = 123 bits (308), Expect = 9e-26
Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M +A +F + +D+ISWN +I + D TM
Sbjct: 397 YAKCGSMEAANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTM 435
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+LPACA +S + GK IHGY +++ ++ + + N L+D+Y KCG L + +F +
Sbjct: 436 ACVLPACASLSALERGKEIHGYILRNG-YSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+WT MI+GY G + A+ F EM GI+PD + SIL+AC+ +G LE G
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
YI++N ++ L ++D+ ++ G++ A + + D +W A++ G
Sbjct: 555 FF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 274 bits (701), Expect = 2e-71
Identities = 131/228 (57%), Positives = 176/228 (77%)
Frame = +3
Query: 21 KKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSIL 200
K+ SA ++FD+L DRDVISWN++ISGYVSNGL +GL I+ +M + G+DVDLAT++S+L
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 258
Query: 201 PACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSV 380
CA + LGKA+H AIKS F ++ +NTLLDMY+KCGDL ++++F KM ER+V
Sbjct: 259 VGCANSGTLSLGKAVHSLAIKSS-FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNV 317
Query: 381 VTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDY 560
V+WTSMI+GY R+G+ D A+KL ++ME EG+K D+ +TSILHACA +GSL++GKDVHDY
Sbjct: 318 VSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377
Query: 561 IVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMI 704
I N ++SNLFV NALMDMYAKCGS+ A VF + KD++ W+ MI
Sbjct: 378 IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI 425
Score = 220 bits (560), Expect = 6e-55
Identities = 105/270 (38%), Positives = 169/270 (62%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + A ++F+++ +R+V+SW ++I+GY +G +++ +M GV +D+ +
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAI 355
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
SIL ACA ++ GK +H Y IK++ + + N L+DMYAKCG + ++ +F M
Sbjct: 356 TSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +++W +MI +KPD T+ +L ACAS +LE GK+
Sbjct: 415 VKDIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKE 453
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
+H YI+RNG S+ VANAL+D+Y KCG +G AR++FD I +KD+V W+ MI GYG+HG
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G+EAI F+ M+ +G+EP++V+F+ +L AC
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSFISILYAC 543
Score = 134 bits (338), Expect = 3e-29
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 51/303 (16%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNILLGKA 242
D V +NA I + G +E+ + S +++ T S+L CA + + GK
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKKS--ELETKTYSSVLQLCAGLKSFTDGKK 120
Query: 243 IHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLS---------------------------- 338
+H IKS+ + +L L+ YA CGDL
Sbjct: 121 VHSI-IKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 339 -----------------------SSVQIFGKMSERSVVTWTSMISGYAREGQCDIAVKLF 449
S+ ++F K+ +R V++W SMISGY G + + ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 450 REMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKC 629
++M GI DL T+ S+L CA++G+L GK VH +++ + + +N L+DMY+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299
Query: 630 GSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLL 809
G + A VF+++ ++VV W++MI GY G+ AI L M+ GV+ + V +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359
Query: 810 LAC 818
AC
Sbjct: 360 HAC 362
Score = 123 bits (308), Expect = 9e-26
Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+KC M +A +F + +D+ISWN +I + D TM
Sbjct: 397 YAKCGSMEAANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTM 435
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+LPACA +S + GK IHGY +++ ++ + + N L+D+Y KCG L + +F +
Sbjct: 436 ACVLPACASLSALERGKEIHGYILRNG-YSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
+ +V+WT MI+GY G + A+ F EM GI+PD + SIL+AC+ +G LE G
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
Query: 549 VHDYIVRN--GLQSNLFVANALMDMYAKCGSIGNARVVFDRIS-NKDVVVWSAMIVG 710
YI++N ++ L ++D+ ++ G++ A + + D +W A++ G
Sbjct: 555 FF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315860|gb|EFH46283.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 274 bits (700), Expect = 3e-71
Identities = 139/273 (50%), Positives = 195/273 (71%), Gaps = 1/273 (0%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K ++ SARK+FDE+ +RDVISWN+II+GYVSNGL KGL +F +M FSG+++DLA
Sbjct: 238 AFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLA 297
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+VS+ CA+ I LG+A+H + +K+ F+ E NTLLDMY+KCGDL S+ +F +
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHCFGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKVVFRE 356
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
MS RSVV++TSMI+GYAREG AVKLF EME EGI PD++TVT++L+ CA N L+ G
Sbjct: 357 MSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEG 416
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VH++I N + ++FV+NALMDMYAKCGS+ A +VF + KD++ W+ +I GY +
Sbjct: 417 KRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKN 476
Query: 723 GKGHEAIDLFH-AMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF+ + P++ T +L AC
Sbjct: 477 CYANEALSLFNLLLVEKRFSPDERTVACVLPAC 509
Score = 228 bits (580), Expect = 3e-57
Identities = 110/271 (40%), Positives = 179/271 (66%), Gaps = 1/271 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + SA+ +F E+ R V+S+ ++I+GY GL + +++F EM G+ D+ T+
Sbjct: 341 YSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
++L CA + GK +H + IK + ++ ++N L+DMYAKCG + + +F +M
Sbjct: 401 TAVLNCCARNRLLDEGKRVHEW-IKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEG-IKPDLFTVTSILHACASNGSLEHGK 545
+ +++W ++I GY++ + A+ LF + VE PD TV +L ACAS + + G+
Sbjct: 460 VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 546 DVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHG 725
++H YI+RNG S+ VAN+L+DMYAKCG++ AR++FD I++KD+V W+ MI GYG+HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHG 579
Query: 726 KGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI LF+ M+ +G+EP++++FV LL AC
Sbjct: 580 FGKEAIALFNQMRQAGIEPDEISFVSLLYAC 610
Score = 165 bits (418), Expect = 2e-38
Identities = 85/270 (31%), Positives = 150/270 (55%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+ C + A ++FD++K + WN +++ +G + +F +M SGV++D T
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+ + + + ++ G+ +HGY +KS F E S+ N+L+ Y K + S+ ++F +M+
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSG-FGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
ER V++W S+I+GY G + + +F +M GI+ DL T+ S+ CA + + G+
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH + V+ N L+DMY+KCG + +A+VVF +S + VV +++MI GY G
Sbjct: 318 VHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGL 377
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
EA+ LF M+ G+ P+ T +L C
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Score = 143 bits (360), Expect = 9e-32
Identities = 83/245 (33%), Positives = 139/245 (56%), Gaps = 7/245 (2%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFS----EMRFSGVDVD 176
Y+KC M A +F E++ +D+ISWN +I GY N + L +F+ E RFS D
Sbjct: 442 YAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSP---D 498
Query: 177 LATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIF 356
T+ +LPACA +S G+ IHGY +++ F++ + N+L+DMYAKCG L + +F
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLARLLF 557
Query: 357 GKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLE 536
++ + +V+WT MI+GY G A+ LF +M GI+PD + S+L+AC+ +G ++
Sbjct: 558 DDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVD 617
Query: 537 HGKDVHDYIVRNGLQSNLFVAN--ALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIV 707
G + I+R+ + V + ++DM A+ G++ A R + + D +W A++
Sbjct: 618 EGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLC 676
Query: 708 GYGLH 722
G +H
Sbjct: 677 GCRIH 681
Score = 121 bits (304), Expect = 3e-25
Identities = 68/253 (26%), Positives = 134/253 (52%), Gaps = 1/253 (0%)
Frame = +3
Query: 63 DRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGV-DVDLATMVSILPACAEMSNILLGK 239
DR V N + + +G +++ + SG D+D T+ S+L CA+ ++ GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKL---LHVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 240 AIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISGYARE 419
+ + I+ + F + +L + L MY CGDL + ++F ++ + W +++ A+
Sbjct: 115 EVDNF-IRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKS 173
Query: 420 GQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSNLFVA 599
G ++ LF++M G++ D +T + + + +S S+ G+ +H YI+++G V
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVG 233
Query: 600 NALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKWSGVE 779
N+L+ Y K + +AR VFD ++ +DV+ W+++I GY +G + + +F M +SG+E
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 780 PNDVTFVGLLLAC 818
+ T V + C
Sbjct: 294 IDLATIVSVFAGC 306
>dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 272 bits (696), Expect = 9e-71
Identities = 138/273 (50%), Positives = 195/273 (71%), Gaps = 1/273 (0%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K +++ SARK+FDE+ +RDVISWN+II+GYVSNGL KGL +F +M SG+++DLA
Sbjct: 87 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 146
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+VS+ CA+ I LG+A+H +K+ F+ E NTLLDMY+KCGDL S+ +F +
Sbjct: 147 TIVSVFAGCADSRLISLGRAVHSIGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKAVFRE 205
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
MS+RSVV++TSMI+GYAREG AVKLF EME EGI PD++TVT++L+ CA L+ G
Sbjct: 206 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 265
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VH++I N L ++FV+NALMDMYAKCGS+ A +VF + KD++ W+ +I GY +
Sbjct: 266 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 325
Query: 723 GKGHEAIDLFH-AMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF+ ++ P++ T +L AC
Sbjct: 326 CYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358
Score = 226 bits (575), Expect = 1e-56
Identities = 108/271 (39%), Positives = 178/271 (65%), Gaps = 1/271 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + SA+ +F E+ DR V+S+ ++I+GY GL + +++F EM G+ D+ T+
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
++L CA + GK +H + IK + ++ ++N L+DMYAKCG + + +F +M
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 308
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREM-EVEGIKPDLFTVTSILHACASNGSLEHGK 545
+ +++W ++I GY++ + A+ LF + E + PD TV +L ACAS + + G+
Sbjct: 309 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 368
Query: 546 DVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHG 725
++H YI+RNG S+ VAN+L+DMYAKCG++ A ++FD I++KD+V W+ MI GYG+HG
Sbjct: 369 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 428
Query: 726 KGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI LF+ M+ +G+E ++++FV LL AC
Sbjct: 429 FGKEAIALFNQMRQAGIEADEISFVSLLYAC 459
Score = 157 bits (397), Expect = 4e-36
Identities = 82/257 (31%), Positives = 143/257 (55%)
Frame = +3
Query: 48 FDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATMVSILPACAEMSNI 227
FDE+K + WN +++ +G + +F +M SGV++D T + + + + ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 228 LLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMSERSVVTWTSMISG 407
G+ +HG+ +KS F E S+ N+L+ Y K + S+ ++F +M+ER V++W S+I+G
Sbjct: 61 HGGEQLHGFILKSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 408 YAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKDVHDYIVRNGLQSN 587
Y G + + +F +M V GI+ DL T+ S+ CA + + G+ VH V+
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 588 LFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGKGHEAIDLFHAMKW 767
N L+DMY+KCG + +A+ VF +S++ VV +++MI GY G EA+ LF M+
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 768 SGVEPNDVTFVGLLLAC 818
G+ P+ T +L C
Sbjct: 240 EGISPDVYTVTAVLNCC 256
Score = 139 bits (350), Expect = 1e-30
Identities = 83/245 (33%), Positives = 137/245 (55%), Gaps = 7/245 (2%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFS----EMRFSGVDVD 176
Y+KC M A +F E++ +D+ISWN II GY N + L +F+ E RFS D
Sbjct: 291 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP---D 347
Query: 177 LATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIF 356
T+ +LPACA +S G+ IHGY +++ F++ + N+L+DMYAKCG L + +F
Sbjct: 348 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLF 406
Query: 357 GKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLE 536
++ + +V+WT MI+GY G A+ LF +M GI+ D + S+L+AC+ +G ++
Sbjct: 407 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 466
Query: 537 HGKDVHDYIVRNGLQSNLFVAN--ALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIV 707
G + I+R+ + V + ++DM A+ G + A R + + D +W A++
Sbjct: 467 EGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 525
Query: 708 GYGLH 722
G +H
Sbjct: 526 GCRIH 530
>ref|NP_193610.1| pentatricopeptide repeat protein DOT4 [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis
thaliana] gi|7268669|emb|CAB78877.1| putative protein
[Arabidopsis thaliana] gi|332658686|gb|AEE84086.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 871
Score = 272 bits (696), Expect = 9e-71
Identities = 138/273 (50%), Positives = 195/273 (71%), Gaps = 1/273 (0%)
Frame = +3
Query: 3 SFYSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLA 182
+FY K +++ SARK+FDE+ +RDVISWN+II+GYVSNGL KGL +F +M SG+++DLA
Sbjct: 238 AFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 183 TMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGK 362
T+VS+ CA+ I LG+A+H +K+ F+ E NTLLDMY+KCGDL S+ +F +
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 363 MSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHG 542
MS+RSVV++TSMI+GYAREG AVKLF EME EGI PD++TVT++L+ CA L+ G
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 543 KDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLH 722
K VH++I N L ++FV+NALMDMYAKCGS+ A +VF + KD++ W+ +I GY +
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Query: 723 GKGHEAIDLFH-AMKWSGVEPNDVTFVGLLLAC 818
+EA+ LF+ ++ P++ T +L AC
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Score = 226 bits (575), Expect = 1e-56
Identities = 108/271 (39%), Positives = 178/271 (65%), Gaps = 1/271 (0%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
YSKC + SA+ +F E+ DR V+S+ ++I+GY GL + +++F EM G+ D+ T+
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
++L CA + GK +H + IK + ++ ++N L+DMYAKCG + + +F +M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREM-EVEGIKPDLFTVTSILHACASNGSLEHGK 545
+ +++W ++I GY++ + A+ LF + E + PD TV +L ACAS + + G+
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 546 DVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHG 725
++H YI+RNG S+ VAN+L+DMYAKCG++ A ++FD I++KD+V W+ MI GYG+HG
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Query: 726 KGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
G EAI LF+ M+ +G+E ++++FV LL AC
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Score = 165 bits (418), Expect = 2e-38
Identities = 85/270 (31%), Positives = 150/270 (55%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFSEMRFSGVDVDLATM 188
Y+ C + A ++FDE+K + WN +++ +G + +F +M SGV++D T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 189 VSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIFGKMS 368
+ + + + ++ G+ +HG+ +KS F E S+ N+L+ Y K + S+ ++F +M+
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 369 ERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLEHGKD 548
ER V++W S+I+GY G + + +F +M V GI+ DL T+ S+ CA + + G+
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 549 VHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIVGYGLHGK 728
VH V+ N L+DMY+KCG + +A+ VF +S++ VV +++MI GY G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 729 GHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
EA+ LF M+ G+ P+ T +L C
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Score = 139 bits (350), Expect = 1e-30
Identities = 83/245 (33%), Positives = 137/245 (55%), Gaps = 7/245 (2%)
Frame = +3
Query: 9 YSKCKKMFSARKIFDELKDRDVISWNAIISGYVSNGLPLKGLEIFS----EMRFSGVDVD 176
Y+KC M A +F E++ +D+ISWN II GY N + L +F+ E RFS D
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP---D 498
Query: 177 LATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSVQIF 356
T+ +LPACA +S G+ IHGY +++ F++ + N+L+DMYAKCG L + +F
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLF 557
Query: 357 GKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNGSLE 536
++ + +V+WT MI+GY G A+ LF +M GI+ D + S+L+AC+ +G ++
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 537 HGKDVHDYIVRNGLQSNLFVAN--ALMDMYAKCGSIGNA-RVVFDRISNKDVVVWSAMIV 707
G + I+R+ + V + ++DM A+ G + A R + + D +W A++
Sbjct: 618 EGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 708 GYGLH 722
G +H
Sbjct: 677 GCRIH 681
Score = 117 bits (294), Expect = 4e-24
Identities = 60/217 (27%), Positives = 119/217 (54%)
Frame = +3
Query: 168 DVDLATMVSILPACAEMSNILLGKAIHGYAIKSHRFNEEMSLNNTLLDMYAKCGDLSSSV 347
D+D T+ S+L CA+ ++ GK + + I+ + F + +L + L MY CGDL +
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNF-IRGNGFVIDSNLGSKLSLMYTNCGDLKEAS 149
Query: 348 QIFGKMSERSVVTWTSMISGYAREGQCDIAVKLFREMEVEGIKPDLFTVTSILHACASNG 527
++F ++ + W +++ A+ G ++ LF++M G++ D +T + + + +S
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 528 SLEHGKDVHDYIVRNGLQSNLFVANALMDMYAKCGSIGNARVVFDRISNKDVVVWSAMIV 707
S+ G+ +H +I+++G V N+L+ Y K + +AR VFD ++ +DV+ W+++I
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 708 GYGLHGKGHEAIDLFHAMKWSGVEPNDVTFVGLLLAC 818
GY +G + + +F M SG+E + T V + C
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306