BLASTX nr result
ID: Akebia24_contig00019879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00019879
(332 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006479956.1| PREDICTED: zinc finger CCCH domain-containin... 73 4e-11
ref|XP_006479955.1| PREDICTED: zinc finger CCCH domain-containin... 73 4e-11
ref|XP_006444349.1| hypothetical protein CICLE_v10018660mg [Citr... 70 3e-10
ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu... 65 8e-09
ref|XP_007050918.1| ATP-dependent RNA helicase, putative [Theobr... 65 1e-08
ref|XP_007200324.1| hypothetical protein PRUPE_ppa000721mg [Prun... 64 3e-08
ref|XP_006293613.1| hypothetical protein CARUB_v10022564mg [Caps... 61 2e-07
ref|XP_002882127.1| zinc finger helicase family protein [Arabido... 60 4e-07
ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [... 59 9e-07
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin... 57 2e-06
emb|CBI36846.3| unnamed protein product [Vitis vinifera] 57 2e-06
ref|XP_006372890.1| hypothetical protein POPTR_0017s06030g [Popu... 57 3e-06
ref|XP_004290791.1| PREDICTED: zinc finger CCCH domain-containin... 57 3e-06
>ref|XP_006479956.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like isoform
X2 [Citrus sinensis]
Length = 1017
Score = 73.2 bits (178), Expect = 4e-11
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +2
Query: 14 KKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHNN 127
K+PM+VS+A+SYVFDLHPPTD QFGDYAA LH CLH+N
Sbjct: 980 KRPMLVSRAISYVFDLHPPTDFQFGDYAAVLHRCLHDN 1017
>ref|XP_006479955.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like isoform
X1 [Citrus sinensis]
Length = 1020
Score = 73.2 bits (178), Expect = 4e-11
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +2
Query: 14 KKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHNN 127
K+PM+VS+A+SYVFDLHPPTD QFGDYAA LH CLH+N
Sbjct: 983 KRPMLVSRAISYVFDLHPPTDFQFGDYAAVLHRCLHDN 1020
>ref|XP_006444349.1| hypothetical protein CICLE_v10018660mg [Citrus clementina]
gi|557546611|gb|ESR57589.1| hypothetical protein
CICLE_v10018660mg [Citrus clementina]
Length = 1020
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 14 KKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHNN 127
K+PM+VS+A+SYVFDLHPPTD QFGDYAA LH CL +N
Sbjct: 983 KRPMLVSRAISYVFDLHPPTDFQFGDYAAVLHRCLRDN 1020
>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1025
Score = 65.5 bits (158), Expect = 8e-09
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2
Query: 14 KKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
+KPM SKA+SYVFDL PPTDIQF DYAA LH+CLH+
Sbjct: 986 RKPMPASKAISYVFDLQPPTDIQFDDYAATLHKCLHD 1022
>ref|XP_007050918.1| ATP-dependent RNA helicase, putative [Theobroma cacao]
gi|508703179|gb|EOX95075.1| ATP-dependent RNA helicase,
putative [Theobroma cacao]
Length = 1022
Score = 64.7 bits (156), Expect = 1e-08
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +2
Query: 5 IILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHNNQ 130
+ L KPM+ S+++SYVFDLHPP+DIQFGDYA+ LH+ LH+ +
Sbjct: 979 VTLNKPMLASRSISYVFDLHPPSDIQFGDYASVLHKHLHDRK 1020
>ref|XP_007200324.1| hypothetical protein PRUPE_ppa000721mg [Prunus persica]
gi|462395724|gb|EMJ01523.1| hypothetical protein
PRUPE_ppa000721mg [Prunus persica]
Length = 1022
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +2
Query: 2 KIILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
K+ KPMMVS+ +SYVFDLH P+DIQFGDYAA LH LH+
Sbjct: 976 KVSTNKPMMVSRPISYVFDLHRPSDIQFGDYAAGLHSFLHH 1016
>ref|XP_006293613.1| hypothetical protein CARUB_v10022564mg [Capsella rubella]
gi|482562321|gb|EOA26511.1| hypothetical protein
CARUB_v10022564mg [Capsella rubella]
Length = 1010
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +2
Query: 14 KKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
+KPM+VS+ SYVFDLHPPTD Q GDY + LH+ LHN
Sbjct: 973 QKPMLVSRPTSYVFDLHPPTDTQLGDYTSHLHKSLHN 1009
>ref|XP_002882127.1| zinc finger helicase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297327966|gb|EFH58386.1| zinc finger helicase
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1015
Score = 59.7 bits (143), Expect = 4e-07
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +2
Query: 5 IILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
+ ++KPM VS+ +SYVF+LH P+DIQFGDY + LH+ LHN
Sbjct: 975 LTIQKPMQVSRPISYVFNLHSPSDIQFGDYTSLLHKSLHN 1014
>ref|NP_182290.1| zinc finger CCCH domain-containing protein 31 [Arabidopsis thaliana]
gi|75317978|sp|O22243.2|C3H31_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 31; Short=AtC3H31
gi|3738282|gb|AAC63624.1| putative ATP-dependent RNA
helicase A [Arabidopsis thaliana]
gi|225898609|dbj|BAH30435.1| hypothetical protein
[Arabidopsis thaliana] gi|330255781|gb|AEC10875.1| zinc
finger CCCH domain-containing protein 31 [Arabidopsis
thaliana]
Length = 1015
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/40 (57%), Positives = 34/40 (85%)
Frame = +2
Query: 5 IILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
+ ++KPM+VS+ +SYVF+LHPP+DIQFG+Y + L + LHN
Sbjct: 975 LTIQKPMLVSRPISYVFNLHPPSDIQFGNYTSLLRKSLHN 1014
>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
vinifera]
Length = 1014
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 2 KIILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHNNQ 130
K+ KKPM+VS+A SYVF+L PPTDI FGDYA ++ LH +
Sbjct: 972 KVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLHGTK 1014
>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
Length = 1007
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 2 KIILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHNNQ 130
K+ KKPM+VS+A SYVF+L PPTDI FGDYA ++ LH +
Sbjct: 965 KVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLHGTK 1007
>ref|XP_006372890.1| hypothetical protein POPTR_0017s06030g [Populus trichocarpa]
gi|550319538|gb|ERP50687.1| hypothetical protein
POPTR_0017s06030g [Populus trichocarpa]
Length = 1056
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 5 IILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
+ +KPMMVSK +SYVF L PPTD+QFG+YAA L + LH+
Sbjct: 1003 VTTRKPMMVSKPISYVFILQPPTDVQFGNYAAILQKHLHD 1042
>ref|XP_004290791.1| PREDICTED: zinc finger CCCH domain-containing protein 31-like
[Fragaria vesca subsp. vesca]
Length = 1027
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +2
Query: 2 KIILKKPMMVSKAVSYVFDLHPPTDIQFGDYAAKLHECLHN 124
K+ KKPMM S+ SYVFDLHPP+D QFG+YA L E L +
Sbjct: 982 KLNTKKPMMASRPTSYVFDLHPPSDFQFGNYATLLQESLRD 1022