BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00019759
         (537 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containi...   194   1e-47
emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]   193   2e-47
ref|XP_006836748.1| hypothetical protein AMTR_s00088p00149930 [A...   108   1e-21
ref|XP_004292553.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr...   105   7e-21
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...   104   2e-20
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]           103   2e-20
ref|XP_007031200.1| Tetratricopeptide repeat (TPR)-like superfam...   101   1e-19
ref|XP_006433564.1| hypothetical protein CICLE_v10000630mg [Citr...   101   1e-19
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....   101   1e-19
ref|XP_006472235.1| PREDICTED: putative pentatricopeptide repeat...   100   2e-19
emb|CBI39620.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat...   100   2e-19
gb|ADE76772.1| unknown [Picea sitchensis]                              99   5e-19
ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containi...    99   7e-19
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Caps...    97   2e-18
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_004304909.1| PREDICTED: putative pentatricopeptide repeat...    97   3e-18

>ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  194 bits (493), Expect = 1e-47
 Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
 Frame = -1

Query: 534 NQELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           +++ FHWN++IA+NA QNPQ AL+ + +MQA A+P NNFTFPAL KACA L  L  T QV
Sbjct: 15  HKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQV 74

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNG 175
           HA++ R GL +D+F AA L+DAYGKC  A  A+Q+F EMP+ +VDVVSWT+L+SA+SSNG
Sbjct: 75  HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 174 CVNEAFESFVRMKHS---DDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKY 4
           CV+EAF++F RM+     D +EC   D                 +CL RG AVH LVVKY
Sbjct: 135 CVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKY 194

Query: 3   G 1
           G
Sbjct: 195 G 195



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQA------IPPNNFTFPALFKACATLG 379
           E + +  W+ +IA     + P+ AL L++QM  +       + PN  T  ++  AC+ LG
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396

Query: 378 HLHATQQVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSL 199
              +   +H +    GL  D  +A+ LID   KC    +  Q+F+EM +    VVSW+S+
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456

Query: 198 VSAFSSNGCVNEAFESFVRMK 136
           + A   +G    A E F  M+
Sbjct: 457 IGAEGIHGEGKRALELFSEMR 477



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQ-NAPQNPQIALSLYKQMQAQ---AIPPNNFTFPALFKACATLGHLH 370
           E +++  WN++I+        + AL  ++ M ++   A+ PN  T  AL K+CA LG + 
Sbjct: 229 EQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVE 288

Query: 369 ATQQVHAHVARRG----LVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTS 202
            +  VH +++ R     +  D  V   L+D + +C + + A ++F  +  +  +VV W++
Sbjct: 289 TSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGK--NVVCWSA 346

Query: 201 LVSAFSSNGCVNEAFESFVRM 139
           +++ +    C  EA   F +M
Sbjct: 347 MIAGYEQGSCPEEALRLFRQM 367


>emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  193 bits (491), Expect = 2e-47
 Identities = 98/181 (54%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
 Frame = -1

Query: 534 NQELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           +++ FHWN++IA+NA QNPQ AL+ + +MQA A+P NNFTFPAL KACA L  L  T QV
Sbjct: 15  HKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQV 74

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNG 175
           HA++ R GL +D+F AA L+DAYGKC  A  A+Q+F EMP+ +VDVVSWT+L+SA+SSNG
Sbjct: 75  HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 174 CVNEAFESFVRMKHS---DDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKY 4
           CV+EAF +F RM+     D +EC   D                 +CL RG AVH LVVKY
Sbjct: 135 CVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKY 194

Query: 3   G 1
           G
Sbjct: 195 G 195



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQA------IPPNNFTFPALFKACATLG 379
           E + +  W+ +IA     + P+ AL L++QM  +       + PN  T  ++  AC+ LG
Sbjct: 337 EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLG 396

Query: 378 HLHATQQVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSL 199
              +   +H +    GL  D  +A+ LID   KC    +  Q+F+EM +    VVSW+S+
Sbjct: 397 ASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSM 456

Query: 198 VSAFSSNGCVNEAFESFVRMK 136
           + A   +G    A E F  M+
Sbjct: 457 IGAEGIHGEGKRALELFSEMR 477



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQ-NAPQNPQIALSLYKQMQAQ---AIPPNNFTFPALFKACATLGHLH 370
           E +++  WN++I+        + AL  ++ M ++   A+ PN  T  AL K+CA LG + 
Sbjct: 229 EQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVE 288

Query: 369 ATQQVHAHVARRG----LVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTS 202
            +  VH +++ R     +  D  V   L+D + +C + + A ++F  +  +  +VV W++
Sbjct: 289 TSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGK--NVVCWSA 346

Query: 201 LVSAFSSNGCVNEAFESFVRM 139
           +++ +    C  EA   F +M
Sbjct: 347 MIAGYEQGSCPEEALRLFRQM 367


>ref|XP_006836748.1| hypothetical protein AMTR_s00088p00149930 [Amborella trichopoda]
           gi|548839308|gb|ERM99601.1| hypothetical protein
           AMTR_s00088p00149930 [Amborella trichopoda]
          Length = 399

 Score =  108 bits (269), Expect = 1e-21
 Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
 Frame = -1

Query: 522 FHWNTII-AQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAH 346
           F WN II A +   +P  ALSLY QM + ++ P+ FTFP  FKACA++  +  T+ VH  
Sbjct: 83  FLWNAIIRAHSRHDSPLGALSLYTQMLSSSLYPDGFTFPFAFKACASVRDIGLTRLVHGQ 142

Query: 345 VARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVN 166
            A   L  D  V   L+ AY +CC+  +A+++F EM +R  D V+WT+LVSA+S NG  +
Sbjct: 143 AAVLSLSRDGLVGTALVSAYARCCAPEDATKVFDEMCRR--DGVAWTALVSAYSMNGWAD 200

Query: 165 EAFESFVRM 139
           EAFE+F +M
Sbjct: 201 EAFEAFGKM 209


>ref|XP_004292553.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Fragaria vesca subsp. vesca]
          Length = 563

 Score =  107 bits (266), Expect = 2e-21
 Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
 Frame = -1

Query: 528 ELFHWNTIIAQN--APQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           + F +NTII  +  A  +P  A+S + QM+ Q +PP+NFTFP L KACA    L   Q V
Sbjct: 55  DTFAYNTIIRAHVAAHSSPSHAISFFTQMRQQGVPPDNFTFPFLLKACA---RLQLGQDV 111

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNG 175
           H H+ + G +SD +V   LI  YG C S   A  +F  M ++  D+VSW+S++S+F++NG
Sbjct: 112 HTHILKLGFLSDVYVQNALISFYGSCGSVELALNVFHAMHEK--DLVSWSSMISSFTNNG 169

Query: 174 CVNEAFESFVRMKHS 130
             NEA   F +M+H+
Sbjct: 170 FFNEALALFRQMQHA 184



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
 Frame = -1

Query: 531 QELFHWNTIIAQ---NAPQNPQIALSLYKQMQ-AQAIPPNNFTFPALFKACATLGHLHAT 364
           ++L  W+++I+    N   N   AL+L++QMQ A+ + P+  T  ++  A ++LG L   
Sbjct: 153 KDLVSWSSMISSFTNNGFFNE--ALALFRQMQHAKNVMPDEVTMLSVISAVSSLGALELG 210

Query: 363 QQVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFS 184
           Q+VH ++ + GL     +   LID Y +C     + ++F EMP +  +V +WT+L +  +
Sbjct: 211 QRVHYYIKKSGLELTVSLGTALIDMYSRCGMVDKSIEVFDEMPLK--NVQTWTALSTGLA 268

Query: 183 SNGCVNEAFESFVRMK 136
            +G   EA   F  MK
Sbjct: 269 VHGRSREALRVFYEMK 284


>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
           gi|557108442|gb|ESQ48749.1| hypothetical protein
           EUTSA_v10020185mg [Eutrema salsugineum]
          Length = 694

 Score =  105 bits (262), Expect = 7e-21
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 ELFHWNTIIAQNAPQNP-QIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++F WN II   +  N  Q AL +Y +MQ   + P++FTFP L KAC+ L +L   + VH
Sbjct: 83  QIFPWNAIIRGYSRNNLFQDALLMYSKMQLARVSPDSFTFPHLLKACSGLPNLQMGRLVH 142

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           AHV R G  +D FV   LI  Y KC     A  +FA +P +   +VSWT+L+SA++ NG 
Sbjct: 143 AHVFRLGFEADVFVQNGLIALYAKCRRMGQAKTVFAGLPLQERTIVSWTALISAYAQNGE 202

Query: 171 VNEAFESFVRMKHSDDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKYG 1
             EA   F +M+  D     K D               D   L +G+++HA VVK G
Sbjct: 203 PMEALGIFSQMRKMD----VKPDWVALVSVLNAFTCLQD---LEQGRSIHASVVKMG 252



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           ++  L  WN +I+  A     + A+ ++ +M  + + P+  +  +   ACA +G L   +
Sbjct: 284 KSPNLILWNAMISGYAKNGYAKDAIDMFHEMINEGVTPDTISITSAISACAQVGSLEQAR 343

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
            +  +V+R  L  D F+++ LID +GKC S   A  +F     +  DVV W++++  +  
Sbjct: 344 WMDEYVSRSNLGDDVFISSALIDMFGKCGSVECARSVFDRTLDK--DVVVWSAMIVGYGL 401

Query: 180 NGCVNEAFESFVRMK 136
           +G   EA   +  M+
Sbjct: 402 HGRAREAISLYRAME 416



 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           + + +  W  +I+  A    P  AL ++ QM+   + P+     ++  A   L  L   +
Sbjct: 183 QERTIVSWTALISAYAQNGEPMEALGIFSQMRKMDVKPDWVALVSVLNAFTCLQDLEQGR 242

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
            +HA V + GL ++  +  +L   Y KC   + A  LF +M  ++ +++ W +++S ++ 
Sbjct: 243 SIHASVVKMGLETEPDLLISLNTMYAKCGRVATAKILFDKM--KSPNLILWNAMISGYAK 300

Query: 180 NGCVNEAFESFVRM 139
           NG   +A + F  M
Sbjct: 301 NGYAKDAIDMFHEM 314


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
           gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332641723|gb|AEE75244.1| mitochondrial editing factor
           22 [Arabidopsis thaliana]
          Length = 694

 Score =  104 bits (259), Expect = 2e-20
 Identities = 67/177 (37%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 ELFHWNTIIAQNAPQNP-QIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++F WN II   +  N  Q AL +Y  MQ   + P++FTFP L KAC+ L HL   + VH
Sbjct: 83  QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           A V R G  +D FV   LI  Y KC    +A  +F  +P     +VSWT++VSA++ NG 
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 171 VNEAFESFVRMKHSDDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKYG 1
             EA E F +M+  D     K D               D   L +G+++HA VVK G
Sbjct: 203 PMEALEIFSQMRKMD----VKPDWVALVSVLNAFTCLQD---LKQGRSIHASVVKMG 252



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           ++  L  WN +I+  A     + A+ ++ +M  + + P+  +  +   ACA +G L   +
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
            ++ +V R     D F+++ LID + KC S   A  +F     R  DVV W++++  +  
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR--DVVVWSAMIVGYGL 401

Query: 180 NGCVNEAFESFVRMK 136
           +G   EA   +  M+
Sbjct: 402 HGRAREAISLYRAME 416



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W  I++  A    P  AL ++ QM+   + P+     ++  A   L  L   + +HA V 
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + GL  +  +  +L   Y KC   + A  LF +M  ++ +++ W +++S ++ NG   EA
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM--KSPNLILWNAMISGYAKNGYAREA 307

Query: 159 FESFVRMKHSD 127
            + F  M + D
Sbjct: 308 IDMFHEMINKD 318


>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  103 bits (258), Expect = 2e-20
 Identities = 67/177 (37%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 ELFHWNTIIAQNAPQNP-QIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++F WN II   +  N  Q AL +Y  MQ   + P++FTFP L KAC+ L HL   + VH
Sbjct: 83  QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVH 142

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           A V R G  +D FV   LI  Y KC    +A  +F  +P     +VSWT++VSA++ NG 
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 171 VNEAFESFVRMKHSDDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKYG 1
             EA E F  M+  D     K D               D   L +G+++HA VVK G
Sbjct: 203 PMEALEIFSHMRKMD----VKPDWVALVSVLNAFTCLQD---LKQGRSIHASVVKMG 252



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           ++  L  WN +I+  A     + A+ ++ +M  + + P+  +  +   ACA +G L   +
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
            ++ +V R     D F+++ LID + KC S   A  +F     R  DVV W++++  +  
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR--DVVVWSAMIVGYGL 401

Query: 180 NGCVNEAFESFVRMK 136
           +G   EA   +  M+
Sbjct: 402 HGRAREAISLYRAME 416



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W  I++  A    P  AL ++  M+   + P+     ++  A   L  L   + +HA V 
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + GL  +  +  +L   Y KC   + A  LF +M  ++ +++ W +++S ++ NG   EA
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM--KSPNLILWNAMISGYAKNGYAREA 307

Query: 159 FESFVRMKHSD 127
            + F  M + D
Sbjct: 308 IDMFHEMINKD 318


>ref|XP_007031200.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508719805|gb|EOY11702.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 605

 Score =  101 bits (252), Expect = 1e-19
 Identities = 51/134 (38%), Positives = 84/134 (62%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           + L  WNT+IA    Q+ + +L+++ QM+++   PN+FTF ++  ACA L  L+  QQVH
Sbjct: 274 KNLITWNTLIAGYERQDSKESLNVFSQMESEGFSPNSFTFTSITAACANLAVLNCGQQVH 333

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
             + RRGL  +  +A  LID Y KC S +++ ++F+EM +R  ++VSWTS++  + ++G 
Sbjct: 334 GGIVRRGLQGNLVLANALIDMYAKCGSIADSRKIFSEMSER--NLVSWTSMMIGYGAHGY 391

Query: 171 VNEAFESFVRMKHS 130
             +A E F  M  S
Sbjct: 392 GKQAVELFDEMVRS 405



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = -1

Query: 534 NQELFHWNTIIAQNAPQNPQI-ALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQ 358
           ++++  W  +IA     + Q+ A +++ +M    + PN FT  ++ KAC ++  L     
Sbjct: 70  DRDVVMWTAMIAGYTSCDHQVHAWTVFCEMVNNGVKPNAFTLSSVLKACKSMQCLACGGL 129

Query: 357 VHAHVARRGLVSDKFVAATLIDAYGKCC-SASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
           VH    + GL    +V   L+D Y  CC S  +A  +F +M ++  ++V+WT+L++ ++ 
Sbjct: 130 VHGVAVKHGLEGSLYVDNALMDMYATCCVSMEDACSVFRDMKEK--NMVTWTTLITGYTH 187

Query: 180 NG 175
            G
Sbjct: 188 RG 189



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQNPQIA-LSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           + + +  W T+I     +      L ++++M  +    N  +F    +ACAT+G     +
Sbjct: 171 KEKNMVTWTTLITGYTHRGDGYGGLQVFREMLLEEAELNPHSFSIAVRACATIGSHTFGR 230

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAF 187
           Q+HA + + GL S+  V  +++D Y +C   S A++ F EM ++  ++++W +L++ +
Sbjct: 231 QIHAAIIKNGLGSNLPVMNSILDMYCRCGFLSEANEYFREMTEK--NLITWNTLIAGY 286


>ref|XP_006433564.1| hypothetical protein CICLE_v10000630mg [Citrus clementina]
           gi|557535686|gb|ESR46804.1| hypothetical protein
           CICLE_v10000630mg [Citrus clementina]
          Length = 609

 Score =  101 bits (251), Expect = 1e-19
 Identities = 53/134 (39%), Positives = 80/134 (59%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++L  WNTIIA          L+++ +M+++   PN FTF ++  ACATL  L   QQVH
Sbjct: 278 KDLITWNTIIAGYEKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVH 337

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           A + RRGL  +  +A  LID Y KC + S++ ++F+EM  R  D+V+WTS++  + ++G 
Sbjct: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSKKIFSEMSDR--DLVTWTSMMIGYGAHGH 395

Query: 171 VNEAFESFVRMKHS 130
             EA E F  M  S
Sbjct: 396 GKEAIELFDEMVKS 409



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 35/128 (27%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQ-NPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W T+I   A   N    L ++K+M  + +  N ++F    +ACA+ G +   + +HA V 
Sbjct: 182 WTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + G  S+  V  +++D Y +    S+A+Q F EM ++  D+++W ++++ +  +G  +E 
Sbjct: 242 KHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEK--DLITWNTIIAGYEKSGS-SEC 298

Query: 159 FESFVRMK 136
              F +MK
Sbjct: 299 LNMFSKMK 306



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           +++  W  +IA     N    A +++ +M    + PN FT  ++ KAC  +  L     V
Sbjct: 75  RDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALV 134

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCC-SASNASQLFAEMPQRAVDVVSWTSLVSAFSSN 178
           H    + GL    +V  +L+D Y  CC S  NA  +F +M  +  + VSWT+L++ ++ +
Sbjct: 135 HGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWK--NDVSWTTLITGYAHS 192

Query: 177 G 175
           G
Sbjct: 193 G 193


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  101 bits (251), Expect = 1e-19
 Identities = 66/177 (37%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 ELFHWNTIIAQNAPQNP-QIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++F WN II   +  N  Q AL +Y +MQ   + P++FTFP L KAC  L HL   + VH
Sbjct: 83  QVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVH 142

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           A V R G  +D FV   LI  Y KC     A  +F  +P     +VSWT++VSA++ NG 
Sbjct: 143 AQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 171 VNEAFESFVRMKHSDDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKYG 1
             EA E F +M+  D     K D               D   L +G+++HA V+K G
Sbjct: 203 PVEALEIFSQMRKMD----VKPDCVALVSVLNAFTCLQD---LEQGRSIHASVMKMG 252



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           ++  L  WN +I+  A     + A+ L+ +M  + + P+  +  +   ACA +G L   +
Sbjct: 284 KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
            +  +V+R     D F+++ LID + KC S   A  +F     R  DVV W++++  +  
Sbjct: 344 WMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR--DVVVWSAMIVGYGL 401

Query: 180 NGCVNEAFESFVRMK 136
           +G   EA   +  M+
Sbjct: 402 HGQAREAISLYRAME 416



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W  I++  A    P  AL ++ QM+   + P+     ++  A   L  L   + +HA V 
Sbjct: 190 WTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVM 249

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + GL ++  +  +L   Y KC   + A  LF +M  ++ +++ W +++S ++ NG   +A
Sbjct: 250 KMGLETEPDLLISLNTMYAKCGQVATAKILFDKM--KSPNLILWNAMISGYAKNGFAKDA 307

Query: 159 FESFVRMKHSD 127
            + F  M + D
Sbjct: 308 IDLFHEMINKD 318


>ref|XP_006472235.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Citrus sinensis]
          Length = 609

 Score =  100 bits (250), Expect = 2e-19
 Identities = 53/134 (39%), Positives = 80/134 (59%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++L  WNTIIA          L+++ +M+++   PN FTF ++  ACATL  L   QQVH
Sbjct: 278 KDLITWNTIIAGYEKSGSSECLNMFSKMKSEGFSPNCFTFTSIIAACATLAALSCGQQVH 337

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           A + RRGL  +  +A  LID Y KC + S++ ++F+EM  R  D+V+WTS++  + ++G 
Sbjct: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSGR--DLVTWTSMMIGYGAHGH 395

Query: 171 VNEAFESFVRMKHS 130
             EA E F  M  S
Sbjct: 396 GKEAIELFDEMVKS 409



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQ-NPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W T+I   A   N    L ++K+M  + +  N ++F    +ACA+ G +   + +HA V 
Sbjct: 182 WTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + G  S+  V  +++D Y +    S+A+Q F EM ++  D+++W ++++ +  +G  +E 
Sbjct: 242 KHGFGSNLPVMNSILDMYCRFDCLSDANQCFDEMTEK--DLITWNTIIAGYEKSGS-SEC 298

Query: 159 FESFVRMKHSDDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKYG 1
              F +MK       S+G                    L  GQ VHA +V+ G
Sbjct: 299 LNMFSKMK-------SEGFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           +++  W  +IA     N    AL+++ +M    + PN FT  ++ KAC  +  L     V
Sbjct: 75  RDVVSWTVMIAGYTSFNCHNQALTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALV 134

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCC-SASNASQLFAEMPQRAVDVVSWTSLVSAFSSN 178
           H    + GL    +V  +L+D Y  CC S  NA  +F +M  +  + VSWT+L++ ++ +
Sbjct: 135 HGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWK--NDVSWTTLITGYAHS 192

Query: 177 G 175
           G
Sbjct: 193 G 193


>emb|CBI39620.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/134 (37%), Positives = 81/134 (60%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++L  WNT+IA     NP  +L ++  M+++   PN FTF ++  ACATL  L+  QQ+H
Sbjct: 259 RDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 318

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
             + RRGL  +  ++  LID Y KC + +++ Q+F  M +R  D+VSWT+++  + ++G 
Sbjct: 319 GRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR--DLVSWTAMMIGYGTHGY 376

Query: 171 VNEAFESFVRMKHS 130
             EA E F +M  S
Sbjct: 377 GEEAVELFDKMVRS 390



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQNPQIA-LSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W T+IA    ++     L +++QM  + +  N F+F    +AC ++G     +Q+HA V 
Sbjct: 163 WTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVT 222

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAF 187
           + G  S+  V  +++D Y +C   S A++ F EM QR  D+++W +L++ +
Sbjct: 223 KHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQR--DLITWNTLIAGY 271


>ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/134 (37%), Positives = 81/134 (60%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++L  WNT+IA     NP  +L ++  M+++   PN FTF ++  ACATL  L+  QQ+H
Sbjct: 275 RDLITWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 334

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
             + RRGL  +  ++  LID Y KC + +++ Q+F  M +R  D+VSWT+++  + ++G 
Sbjct: 335 GRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR--DLVSWTAMMIGYGTHGY 392

Query: 171 VNEAFESFVRMKHS 130
             EA E F +M  S
Sbjct: 393 GEEAVELFDKMVRS 406



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQNPQIA-LSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           W T+IA    ++     L +++QM  + +  N F+F    +AC ++G     +Q+HA V 
Sbjct: 179 WTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVT 238

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAF 187
           + G  S+  V  +++D Y +C   S A++ F EM QR  D+++W +L++ +
Sbjct: 239 KHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQR--DLITWNTLIAGY 287


>gb|ADE76772.1| unknown [Picea sitchensis]
          Length = 232

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 48/115 (41%), Positives = 74/115 (64%)
 Frame = -1

Query: 471 ALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVARRGLVSDKFVAATLID 292
           AL L+++MQ   + PN  TFP++  ACA L  L   + +H ++ + G  SD FV +TLID
Sbjct: 14  ALKLFQRMQLTKVKPNAETFPSVLPACANLAALEPGKVLHLYIIKSGFESDVFVGSTLID 73

Query: 291 AYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEAFESFVRMKHSD 127
            Y KC S  +AS++F  M  R  +VVSW ++++A++ +GC  +A + F +MKHSD
Sbjct: 74  MYAKCSSIGDASKVFDGMSTR--NVVSWNAMIAAYAIHGCGKQALDLFEQMKHSD 126


>ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 99.0 bits (245), Expect = 7e-19
 Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
 Frame = -1

Query: 516 WNTII-AQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           WN II   ++  +PQ A+SL+ +M+ + + PNN TFP L KACATL  L   +Q HA   
Sbjct: 99  WNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAI 158

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + GL  D +V  TLI+ YG C   S A ++F EM +R   +VSW ++++A   N C +EA
Sbjct: 159 KCGLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERT--LVSWNAVITACVENFCFDEA 216

Query: 159 FESFVRM 139
            + F++M
Sbjct: 217 IDYFLKM 223



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/114 (28%), Positives = 55/114 (48%)
 Frame = -1

Query: 471 ALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVARRGLVSDKFVAATLID 292
           A+  + +M      P+  T   +  ACA LG+L   + VH+ V  RG+V +  +    +D
Sbjct: 216 AIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVD 275

Query: 291 AYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEAFESFVRMKHS 130
            Y K      A  +F  + Q++  V +W++++   + +G  NEA E F  M  S
Sbjct: 276 MYAKSGDVGCARHVFNCLKQKS--VWTWSAMILGLAQHGFANEAIELFTNMTSS 327


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 51/125 (40%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNP-QIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           + LF WN +I   A   P ++A+SLY QM+   + P+ FTFP + KAC+ L  +   +++
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNG 175
           H  V R GL SD FV A LID Y KC    +A Q+F ++ +R  DVV W S+++ +S NG
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER--DVVCWNSMLATYSQNG 182

Query: 174 CVNEA 160
             +E+
Sbjct: 183 QPDES 187



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           + +++  WN+++A  +    P  +L+L + M    + P   TF     A A  G L   +
Sbjct: 164 DERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGK 223

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
           ++H +  R G  S+  V   L+D Y K  S + A  LF  + ++ V  VSW ++++ ++ 
Sbjct: 224 ELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRV--VSWNAMITGYAM 281

Query: 180 NGCVNEAFESFVRMK 136
           +G  NEA + F  MK
Sbjct: 282 HGHANEALDLFKEMK 296


>ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Capsella rubella]
           gi|482568222|gb|EOA32411.1| hypothetical protein
           CARUB_v10015683mg [Capsella rubella]
          Length = 694

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 ELFHWNTIIAQNAPQNP-QIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++F WN II   +  +  Q AL +Y +MQ   + P++FTFP L KAC+ L HL   + VH
Sbjct: 83  QIFPWNAIIRGYSRNSYFQDALLMYSKMQLARVSPDSFTFPHLLKACSGLSHLPMGRLVH 142

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
           + V R G  +D FV   LI  Y KC     A  +F  +P     +VSWT+++SA++ NG 
Sbjct: 143 SQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIISAYAQNGE 202

Query: 171 VNEAFESFVRMKHSDDTECSKGDXXXXXXXXXXXXXADDPDCLIRGQAVHALVVKYG 1
           + EA E F +M+        K D               D   L +G+++HA VVK G
Sbjct: 203 LVEALEIFSQMRKMG----VKPDWVALVSVLNAFTCLQD---LEQGRSIHASVVKMG 252



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
 Frame = -1

Query: 516 WNTIIAQNAPQNPQI--ALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHV 343
           W  II+  A QN ++  AL ++ QM+   + P+     ++  A   L  L   + +HA V
Sbjct: 190 WTAIISAYA-QNGELVEALEIFSQMRKMGVKPDWVALVSVLNAFTCLQDLEQGRSIHASV 248

Query: 342 ARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNE 163
            + GL ++  +  +L   Y KC   + A  LF +M  ++ +++ W +++S ++ NG   +
Sbjct: 249 VKMGLETEPDLLISLNTMYAKCGQVATAKILFDKM--KSPNLILWNAMISGYAKNGYAKD 306

Query: 162 AFESFVRMKHSD 127
           A + F +M   D
Sbjct: 307 AIDMFHKMIDKD 318



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = -1

Query: 537 ENQELFHWNTIIAQNAPQN-PQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQ 361
           ++  L  WN +I+  A     + A+ ++ +M  + + P+  +  +   ACA +G L    
Sbjct: 284 KSPNLILWNAMISGYAKNGYAKDAIDMFHKMIDKDVRPDTISITSAISACAQVGCLEQAC 343

Query: 360 QVHAHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSS 181
            +  +V R     D F+++ LID + KC S   A  +F     R  DVV W++++  +  
Sbjct: 344 WMEKYVGRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR--DVVVWSAMIVGYGL 401

Query: 180 NGCVNEAFESFVRMKH 133
           +G   EA   +  M+H
Sbjct: 402 HGRAREAISLYRTMEH 417


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
 Frame = -1

Query: 516 WNTII-AQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVA 340
           WN II   ++  +PQ A+SL+ +M+ + + PNN TFP L KACATL  L   +Q HA   
Sbjct: 99  WNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAI 158

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           + GL  D +V  TLI  YG C   S A ++F EM +R   +VSW ++++A   N C +EA
Sbjct: 159 KCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERT--LVSWNAVITACVENFCFDEA 216

Query: 159 FESFVRM 139
            + F++M
Sbjct: 217 IDYFLKM 223



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/114 (28%), Positives = 55/114 (48%)
 Frame = -1

Query: 471 ALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVARRGLVSDKFVAATLID 292
           A+  + +M      P+  T   +  ACA LG+L   + VH+ V  RG+V +  +    +D
Sbjct: 216 AIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQLGTAFVD 275

Query: 291 AYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEAFESFVRMKHS 130
            Y K      A  +F  + Q++  V +W++++   + +G  NEA E F  M  S
Sbjct: 276 MYAKSGDVGCARHVFNCLKQKS--VWTWSAMILGLAQHGFANEAIELFTNMMSS 327


>ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 46/128 (35%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
 Frame = -1

Query: 516 WNTIIAQNAPQNPQIALSLYKQMQAQAIP-PNNFTFPALFKACATLGHLHATQQVHAHVA 340
           +N +I   + + P +AL LY+ ++ + +P PNN+TFP + KAC+ L  L + + VH H A
Sbjct: 97  YNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAA 156

Query: 339 RRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEA 160
           R GL +D FV+  L+D Y KC S  +A+ +F  MP R  DVV+W ++++ ++ +G  ++ 
Sbjct: 157 RAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR--DVVAWNAMLAGYALHGKYSDT 214

Query: 159 FESFVRMK 136
               + M+
Sbjct: 215 IACLLLMQ 222



 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 38/113 (33%), Positives = 60/113 (53%)
 Frame = -1

Query: 471 ALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVARRGLVSDKFVAATLID 292
           A  ++++MQA  + P+  T  +L  AC+ L  L   +  H  V  RG+ S+  +   LID
Sbjct: 420 AFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALID 479

Query: 291 AYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEAFESFVRMKH 133
            Y KC     + Q+F  MP R  D+VSW ++++ +  +G   EA   F+ MKH
Sbjct: 480 MYAKCGRIDLSRQIFDVMPAR--DIVSWNTMIAGYGIHGLGKEATALFLDMKH 530



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -1

Query: 471 ALSLYKQMQAQAIPPNNFTFPA-LFKACATLGHLHATQQVHAHVARRGLVSDKFVAATLI 295
           A SL+K M AQ +   + T  A   +ACA L  L   +Q+HA +A+ GL +D     +L+
Sbjct: 318 AFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLL 377

Query: 294 DAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEAFESFVRMK 136
             Y K      A+ LF +M  +  D VS+++LVS +  NG  +EAF  F +M+
Sbjct: 378 SMYAKAGLIDQATTLFDQMVVK--DTVSYSALVSGYVQNGKADEAFRVFRKMQ 428


>ref|XP_004304909.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Fragaria vesca subsp. vesca]
          Length = 608

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 47/131 (35%), Positives = 81/131 (61%)
 Frame = -1

Query: 531 QELFHWNTIIAQNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVH 352
           ++L  WNT+I+     +P+ +LS++ +M+++   PN+FT  ++  ACA +  L+  +QVH
Sbjct: 276 KDLITWNTLISGYEKSDPRESLSIFSRMESEGFSPNSFTLTSVTAACANMAALNCGEQVH 335

Query: 351 AHVARRGLVSDKFVAATLIDAYGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGC 172
             + RRG   +  +A TLID Y KC S ++A ++F++M  R  ++VSWTS++  +  +G 
Sbjct: 336 GTIIRRGFNKNLALANTLIDMYAKCGSITDAHKIFSDMSDR--NLVSWTSMMLGYGDHGH 393

Query: 171 VNEAFESFVRM 139
             EA E F  M
Sbjct: 394 GKEAVELFDEM 404



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/111 (31%), Positives = 60/111 (54%)
 Frame = -1

Query: 468 LSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQVHAHVARRGLVSDKFVAATLIDA 289
           L +++QM  + + PN F+F    KACA++G     +Q+H+ V +    S   V  +++D 
Sbjct: 197 LQVFRQMLLEGVEPNPFSFSIAVKACASVGSQTFGRQLHSAVIKYAFDSHLPVMNSILDM 256

Query: 288 YGKCCSASNASQLFAEMPQRAVDVVSWTSLVSAFSSNGCVNEAFESFVRMK 136
           Y K C    A Q F EM Q+  D+++W +L+S +  +    E+   F RM+
Sbjct: 257 YCKFCCLPEAKQYFDEMSQK--DLITWNTLISGYEKSD-PRESLSIFSRME 304



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
 Frame = -1

Query: 531 QELFHWNTIIA-QNAPQNPQIALSLYKQMQAQAIPPNNFTFPALFKACATLGHLHATQQV 355
           +++  W  +IA   +  +   A  ++ +M    + PN FTF ++ KAC  +  L     V
Sbjct: 73  RDVVTWTAMIAGYTSCSHHSSAWGVFCEMFRSDMEPNAFTFSSVLKACKGMVSLLCGALV 132

Query: 354 HAHVARRGLVSDKFVAATLIDAYGKCC-SASNASQLFAEMPQRAVDVVSWTSLVSAFSSN 178
           H    + G+    +V   L+D YG CC S  +A ++F+E+ ++  + VSWTSL++ ++  
Sbjct: 133 HGSTVKYGMKGSIYVENALMDMYGACCVSMDDACKVFSELHEK--NAVSWTSLITGYTHR 190

Query: 177 G 175
           G
Sbjct: 191 G 191