BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00018415
         (1492 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   732   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              723   0.0  
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...   692   0.0  
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   680   0.0  
ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phas...   679   0.0  
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   675   0.0  
gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Mimulus...   674   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   667   0.0  
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   665   0.0  
ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prun...   665   0.0  
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   663   0.0  
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   663   0.0  
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           662   0.0  
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           662   0.0  
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   658   0.0  
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   657   0.0  
gb|EYU23584.1| hypothetical protein MIMGU_mgv1a026780mg, partial...   655   0.0  
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   640   0.0  
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr...   639   e-180
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   634   e-179

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  732 bits (1890), Expect = 0.0
 Identities = 355/472 (75%), Positives = 405/472 (85%), Gaps = 3/472 (0%)
 Frame = -1

Query: 1426 KGILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLP 1247
            +G+ P +RH+SR++PP+PA AAPVIRVSNN+AQL  PKE PKPRQLLSLP FPA   PLP
Sbjct: 10   QGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAH--PLP 67

Query: 1246 GKNSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIP 1067
            GK+ V+  G P  +TAI+W+KYYFD+IP S++QSHFNKGLV ME S+  D+S  ++ QI 
Sbjct: 68   GKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127

Query: 1066 SLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSA 887
             LRKIKPNEVME G +IYVPVSVAE++ISKRFDTIPSGTL+PNADEI+YLQRLV YKD A
Sbjct: 128  PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPA 187

Query: 886  IMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKES 707
            I+VLNKPPK+P+KGNLPVHNSMDALAAAAL++ YEEGPKLVHRLDRESSGLLLMGR KES
Sbjct: 188  ILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKES 247

Query: 706  IAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGK 527
            +A LHWLF            W+DACEA  Q YWALVIGSP +K+GVIHAPLSKV+L+DGK
Sbjct: 248  VAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGK 307

Query: 526  TERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIV 347
            TERVI+A+ S +E SQ+AITEYRVLGP INGCSWIEL P T RKHQLRVHCAEALGTPIV
Sbjct: 308  TERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIV 367

Query: 346  GDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELIL 167
            GDYKYGW+VH +WK MPRVD+EP TGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELIL
Sbjct: 368  GDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELIL 427

Query: 166  PNIAKFRYVLDGQP---DKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            PNIAKF  +LD +P   +++PKLS KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 428  PNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  723 bits (1866), Expect = 0.0
 Identities = 352/474 (74%), Positives = 405/474 (85%), Gaps = 5/474 (1%)
 Frame = -1

Query: 1426 KGILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLP 1247
            +G+ P +RH+SR++PP+PA AAPVIRVSNN+AQL  PKE PKPRQLLSLP FPA   PLP
Sbjct: 10   QGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAH--PLP 67

Query: 1246 GKNSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIP 1067
            GK+ V+  G P  +TAI+W+KYYFD+IP S++QSHFNKGLV ME S+  D+S  ++ QI 
Sbjct: 68   GKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127

Query: 1066 SLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRL--VMYKD 893
             LRKIKPNEVME G +IYVPVSVAE++ISKRFDTIPSGTL+PNADEI+YLQRL  + ++D
Sbjct: 128  PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQD 187

Query: 892  SAIMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRK 713
             AI+VLNKPPK+P+KGNLPVHNSMDALAAAAL++ YEEGPKLVHRLDRESSGLLLMGR K
Sbjct: 188  PAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTK 247

Query: 712  ESIAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLND 533
            ES+A LHWLF            W+DACEA  Q YWALVIGSP +K+GVIHAPLSKV+L+D
Sbjct: 248  ESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDD 307

Query: 532  GKTERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTP 353
            GKTERVI+A+ S +E SQ+AITEYRVLGP INGCSWIEL P T RKHQLRVHCAEALGTP
Sbjct: 308  GKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTP 367

Query: 352  IVGDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 173
            IVGDYKYGW+VH +WK MPRVD+EP TGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 368  IVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 427

Query: 172  ILPNIAKFRYVLDGQP---DKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            ILPNIAKF  +LD +P   +++PKLS KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 428  ILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508779021|gb|EOY26277.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 471

 Score =  692 bits (1786), Expect = 0.0
 Identities = 344/477 (72%), Positives = 389/477 (81%), Gaps = 1/477 (0%)
 Frame = -1

Query: 1447 MSKTLLRKGILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFP 1268
            M K+ L    L  +RH+SR++PP PA A PV+RVSN++A L  PK+ PKPRQLLSLP FP
Sbjct: 1    MQKSRLGWQFLSLVRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFP 60

Query: 1267 AQHQPLPGKNSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSK 1088
                PLPGKN    PG  AR+TAI+WLKYYFD+IP S IQSHFNKGLVQME S++ DT  
Sbjct: 61   GY--PLPGKN----PGGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCI 114

Query: 1087 GEQAQIPSLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRL 908
                 +  LRKIK NEVMEVG +++VPVS+AE++ISKRFD IPSGTLYPN DEIDYLQRL
Sbjct: 115  ERDGLMKPLRKIKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRL 174

Query: 907  VMYKDSAIMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLL 728
            V YKD AI+VLNKPPKLPVKG+LPVHNSMDALAAAALSY ++EGPKLVHRLDRESSGLLL
Sbjct: 175  VKYKDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLL 234

Query: 727  MGRRKESIAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSK 548
            MGR KES+A LHWLF            WNDAC+ + Q +WALVIG+P EK+G+I APLSK
Sbjct: 235  MGRTKESVAHLHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSK 294

Query: 547  VVLNDGKTERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAE 368
            ++L+DGKTERVI+A    +E SQ+AITEYRVLGP INGCSWIEL PLT RKHQLRVHCAE
Sbjct: 295  ILLDDGKTERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAE 354

Query: 367  ALGTPIVGDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHL 188
            ALGTPIVGDYKYGW+VH +WK MPRVDIEP TGKPYK+RRPEGLDVQKGSVLSKVPLLHL
Sbjct: 355  ALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHL 414

Query: 187  HCRELILPNIAKFRYVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            HCREL+LPNIAKF  VL+   +   P LS KPD+LRFVA MP HMKISWNLMSSYLV
Sbjct: 415  HCRELVLPNIAKFLPVLNKNTETLPPALSMKPDLLRFVATMPKHMKISWNLMSSYLV 471


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform X1
            [Cicer arietinum]
          Length = 479

 Score =  680 bits (1754), Expect = 0.0
 Identities = 332/464 (71%), Positives = 382/464 (82%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1408 IRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVS 1229
            +RH+SR+ PPKP     VIRVSNNIA+L  PKE PKPRQLLSLP FP    PLPGKNS S
Sbjct: 18   VRHYSRIRPPKPVSVEKVIRVSNNIARLDVPKEGPKPRQLLSLPPFPCH--PLPGKNSTS 75

Query: 1228 PPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIK 1049
             PG+   +TA+ W+KYYF     S+I+SHF +GLVQME     D+ K ++  +  +RKI+
Sbjct: 76   APGKRDHVTAVNWIKYYFKGTSGSVIESHFREGLVQMEDLIVDDSFKQKKELMKPMRKIR 135

Query: 1048 PNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNK 869
            PNEVM+ GA+++V VS+AE+KISKRFD IPSGTL PNADEI YLQRLV+YKDSAI++LNK
Sbjct: 136  PNEVMKPGARVHVSVSMAETKISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIMLNK 195

Query: 868  PPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHW 689
            PPKLPVKGNLPVHNSMDALAAAALSY Y++GPKLVHRLDRESSG+LL+GR K+S++ L W
Sbjct: 196  PPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHLQW 255

Query: 688  LFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVII 509
            LF            WNDACE+  Q YWALVIG+P EK+G+IHAPLSKV+LNDGKTERVI+
Sbjct: 256  LFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERVIL 315

Query: 508  AHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYG 329
            AH SSIE  Q+A+TEYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYG
Sbjct: 316  AHESSIEPHQEAVTEYRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYG 375

Query: 328  WYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKF 149
            W+VHS+WK MPRVDIEP TGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCREL LPNIAKF
Sbjct: 376  WFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIAKF 435

Query: 148  RYVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
              VL+    +  P LS +PDVLRFVA MP+HM+ISWNLMSSYLV
Sbjct: 436  LNVLEKSSQQLDPSLSLQPDVLRFVATMPNHMRISWNLMSSYLV 479


>ref|XP_007160970.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
            gi|561034434|gb|ESW32964.1| hypothetical protein
            PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  679 bits (1753), Expect = 0.0
 Identities = 324/468 (69%), Positives = 388/468 (82%), Gaps = 1/468 (0%)
 Frame = -1

Query: 1420 ILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGK 1241
            +L  +RH+SR+ PP+P    PVIRVSNN+A+L  PKE PKPRQLLSLP FP    PLP K
Sbjct: 15   LLFVVRHYSRIQPPRPVSVEPVIRVSNNVARLDAPKEGPKPRQLLSLPPFPGH--PLPAK 72

Query: 1240 NSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSL 1061
            +S S PGQ   +TA+ W+KYYF     S+I+SHF +GLVQME   ++D+   ++  +  +
Sbjct: 73   SSTSDPGQRDYVTAVNWIKYYFKGAWGSVIESHFREGLVQMEDEVTADSYTQKENLMKPM 132

Query: 1060 RKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIM 881
            RKI+PNEVM+ GA+++VPVS+AE+++SKR+D IP GTLYPNADEI YLQRLV+YKDSAI+
Sbjct: 133  RKIRPNEVMKHGARVHVPVSIAETRVSKRYDAIPCGTLYPNADEIKYLQRLVIYKDSAII 192

Query: 880  VLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIA 701
            VLNKPPKLPVKGNLPVHNSMDALAAAALSY Y+EGPKLVHRLDRE+SG+LL+GR K+S +
Sbjct: 193  VLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETSGILLLGRTKDSAS 252

Query: 700  QLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTE 521
             L WLF            WNDACEA  Q YWALVIG+P EK+G+IHAPLSKV+LNDGKTE
Sbjct: 253  HLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTE 312

Query: 520  RVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGD 341
            R+I+A+ SS+E  Q+A+TE+RVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGD
Sbjct: 313  RIILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGD 372

Query: 340  YKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPN 161
            YKYGW+VHS+WK MPR+DIEP TGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCREL+LPN
Sbjct: 373  YKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPN 432

Query: 160  IAKFRYVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            IAKF +VL+   ++ H  L+ +P+VLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 433  IAKFLHVLNNSSEELHSSLNQQPEVLRFVATMPSHMRISWNLMSSYLV 480


>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 476

 Score =  675 bits (1742), Expect = 0.0
 Identities = 329/463 (71%), Positives = 382/463 (82%), Gaps = 1/463 (0%)
 Frame = -1

Query: 1405 RHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVSP 1226
            RH+SR+ PP+P    PVI VSNNIA+L  PKE PKPRQLLSLP FP    PLP K+S+S 
Sbjct: 19   RHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGH--PLPDKSSISG 76

Query: 1225 PGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIKP 1046
              Q   +TA+ W+KYYF     S+I+SHF +GLVQME  DSS T K EQ +   +RKI+P
Sbjct: 77   SRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSS-TQKEEQMK--PMRKIRP 133

Query: 1045 NEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNKP 866
            NEVM+ GA+++VPVS+ E++ISKR+D IPSGTLYPNADEI YLQRLV+YKDSAI+VLNKP
Sbjct: 134  NEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKP 193

Query: 865  PKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHWL 686
            PKLPVKG+LPVHNSMDALAAAALSY Y+EGPKLVHRLDRESSG+LL+GR K+S++ L WL
Sbjct: 194  PKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWL 253

Query: 685  FXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVIIA 506
            F            WN+ACEA  Q YWALVIG+P EK+G+IHAPLSKV+LNDGKTER+I+A
Sbjct: 254  FSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILA 313

Query: 505  HPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYGW 326
            H SS+E  Q+A+TEYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW
Sbjct: 314  HHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGW 373

Query: 325  YVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFR 146
            +VHS+WK MPRVDIEP TGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCREL+LPNI KF 
Sbjct: 374  FVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFM 433

Query: 145  YVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            +VL+   ++    L  +PDVLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 434  HVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 476


>gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Mimulus guttatus]
          Length = 460

 Score =  674 bits (1738), Expect = 0.0
 Identities = 333/462 (72%), Positives = 377/462 (81%), Gaps = 3/462 (0%)
 Frame = -1

Query: 1396 SRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVSPPGQ 1217
            S++ PP PA A  V+RVSNNIA L  PKE PKPRQLLSLP FP    PLPG+NS S    
Sbjct: 5    SKIRPPPPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGN--PLPGRNSTSVE-- 60

Query: 1216 PARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIKPNEV 1037
               +TAI+WLKYYFDD+   +IQ HFNKGLV+MEC +SS  S+  + Q  S RKIKP+E+
Sbjct: 61   --HVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYRGQTMSTRKIKPSEI 118

Query: 1036 MEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNKPPKL 857
            +E G ++YVPVSVAE+K+SKRFD IPSGTL+PNADEI YLQRLV YKDSAI+VLNKPPKL
Sbjct: 119  VEEGDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRLVKYKDSAILVLNKPPKL 178

Query: 856  PVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHWLFXX 677
            PVKGNLPVHNSMDALAAAALSY Y+EGPKLVHRLDRESSGLLLMGR KESI+ LHWLF  
Sbjct: 179  PVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHWLFSD 238

Query: 676  XXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVIIAHPS 497
                      W+DAC+A  Q YWALVIG PN+K+GVI APL+KV+LNDGKTE VI++H S
Sbjct: 239  VRKAASFSKEWSDACDAMYQRYWALVIGVPNQKEGVICAPLTKVLLNDGKTEMVILSHNS 298

Query: 496  SIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVH 317
             +E SQ+AIT YRVLGP INGCSWIELHPLT RKHQLRVHCAEALGTPIVGDYKYGW+VH
Sbjct: 299  GLEASQEAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGTPIVGDYKYGWFVH 358

Query: 316  SKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFRYV- 140
            SKWK MPR+D EP TG+PYKMRRPEGLDVQKGSVLSKVPLLHLH RE++LPNI KF  + 
Sbjct: 359  SKWKQMPRLDFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSREMVLPNIEKFIELH 418

Query: 139  --LDGQPDKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
              + G  +  P+L +KPD+LRFV PMP HMKISWNLMSSYLV
Sbjct: 419  KHMSGNYNVDPELCAKPDILRFVVPMPKHMKISWNLMSSYLV 460


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  667 bits (1720), Expect = 0.0
 Identities = 334/477 (70%), Positives = 384/477 (80%), Gaps = 1/477 (0%)
 Frame = -1

Query: 1447 MSKTLLRKGILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFP 1268
            M K +  + ++   R +SR++PP PA A PVIRVSNN+A L  PK+ PKPRQLLSLP FP
Sbjct: 1    MWKNIYCRRVVSQGRSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFP 60

Query: 1267 AQHQPLPGKNSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSK 1088
                PLPG+NS++     + +TAI+W+KYYFD+I  S IQSHFNKGL  +EC + S +  
Sbjct: 61   GL--PLPGRNSMA-----SHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSI- 112

Query: 1087 GEQAQIPSLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRL 908
             E     SLRKIK N++ME GA+++V VSVAE++ISKRFDTIPSGTLYPNADEI YLQRL
Sbjct: 113  -EYGGQMSLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRL 171

Query: 907  VMYKDSAIMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLL 728
            V YKDSAI+VLNKPP+LPVKGNLP+HNSMDALAAAALSY Y+EGPKLV RLDRESSGLLL
Sbjct: 172  VKYKDSAIIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLL 231

Query: 727  MGRRKESIAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSK 548
            MGR KESI  L WLF            WNDAC+A  Q YWALVIGSP EK+G+I APLSK
Sbjct: 232  MGRTKESIDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSK 291

Query: 547  VVLNDGKTERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAE 368
            V+LNDGKTERV++A  S +E SQ+A+TEYRVLGP INGCSWIEL PLT RKHQLRVHCAE
Sbjct: 292  VLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAE 351

Query: 367  ALGTPIVGDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHL 188
            ALGTPIVGDYKYGW VH +WK MPRVDIEP +GKPYK+RRP GLDVQKGSVLSKVPLLHL
Sbjct: 352  ALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHL 411

Query: 187  HCRELILPNIAKFRYVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            HCRE +LPNIAKF  VL+ + +  HP L +KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 412  HCREFVLPNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
            gi|557538602|gb|ESR49646.1| hypothetical protein
            CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  665 bits (1717), Expect = 0.0
 Identities = 337/471 (71%), Positives = 386/471 (81%), Gaps = 5/471 (1%)
 Frame = -1

Query: 1417 LPCIRHFSRLSPPKPARAAPVIRVSNN-IAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGK 1241
            L  IRH+SR+SPP+PA    VIRVS   +A L  PK  PKPRQLLSLP FP  +  LPGK
Sbjct: 12   LSSIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHN--LPGK 65

Query: 1240 NSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSL 1061
            +     G+   +TA++W+KYYFD++  S+IQSHFNKGLVQMEC++  D S  EQ Q+  +
Sbjct: 66   HW----GRQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGD-SFVEQGQMKPI 120

Query: 1060 RKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIM 881
            RKIK NEVME GA+I++PVS+ E +ISKR+DTIPSGTL PNADEIDYL+RLV Y+DSAI+
Sbjct: 121  RKIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAIL 180

Query: 880  VLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIA 701
            VLNKPPK+P+KG+LPVHNSMDALAAAALSY Y EGPKLVHRLDRESSGLLLMGR KES++
Sbjct: 181  VLNKPPKVPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVS 240

Query: 700  QLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTE 521
             L WLF            WNDACEA  Q YWALVIGSP EKQG+IHAPLSKV+L+DGKTE
Sbjct: 241  LLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTE 300

Query: 520  RVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGD 341
            R+I+A  S +E SQ+A+TEYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGD
Sbjct: 301  RIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGD 360

Query: 340  YKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPN 161
            YKYGW+VH +WK MPRVDIEP +GKPYK+RRP+GLDVQKGSVLSKVPLLHLHCREL+LPN
Sbjct: 361  YKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPN 420

Query: 160  IAKFRYVLDGQPDK-HPKLSSK---PDVLRFVAPMPSHMKISWNLMSSYLV 20
            IAKFR VL+ + D   P LSSK   PD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 421  IAKFRNVLNQKSDNLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
            gi|462405724|gb|EMJ11188.1| hypothetical protein
            PRUPE_ppa005240mg [Prunus persica]
          Length = 471

 Score =  665 bits (1716), Expect = 0.0
 Identities = 329/463 (71%), Positives = 379/463 (81%), Gaps = 1/463 (0%)
 Frame = -1

Query: 1405 RHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVSP 1226
            R +SR+ PP    A P+IRVSN++A+L  PKE PKPRQLLSLP FP    PLPGK S   
Sbjct: 16   REYSRVCPPPAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPFPGH--PLPGKRS-HE 72

Query: 1225 PGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIKP 1046
             G  +R+TA++W+KYYFD I  S IQSHF +GLVQMEC    +    ++ Q+  +RKI+P
Sbjct: 73   GGVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMECPGMIE----KEGQMKPMRKIRP 128

Query: 1045 NEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNKP 866
            +EVMEVGA++YVPVSV ES++S+RFD IPSGTLYPNADEI+Y+QR V YKDSAI+VLNKP
Sbjct: 129  SEVMEVGARVYVPVSVVESRVSRRFDCIPSGTLYPNADEIEYMQRRVKYKDSAIIVLNKP 188

Query: 865  PKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHWL 686
            PKLPVKGNLPVHNSMDALAAAALSYG  +GPKLVHRLDRESSGL LMGR KES++ L WL
Sbjct: 189  PKLPVKGNLPVHNSMDALAAAALSYGNNKGPKLVHRLDRESSGLHLMGRTKESVSLLQWL 248

Query: 685  FXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVIIA 506
            +            W+DACEAR Q YWALVIGSP EK+G+I APLSKV+L++GKTERVI+A
Sbjct: 249  YTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVILA 308

Query: 505  HPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYGW 326
            H S +E SQ AIT+YRVLGPTINGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKYGW
Sbjct: 309  HQSGLEASQKAITQYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 368

Query: 325  YVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFR 146
            +VH +WK MP VD+EP +G PYK+RRP GLDVQKGSVLSKVPLLHLHCREL+LPNIAKF 
Sbjct: 369  FVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL 428

Query: 145  YVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
             +LD + D  HP +SSKPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 429  LILDQKLDSLHPAVSSKPDILRFVASMPSHMKISWNLMSSYLV 471


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  663 bits (1711), Expect = 0.0
 Identities = 327/471 (69%), Positives = 375/471 (79%)
 Frame = -1

Query: 1432 LRKGILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQP 1253
            +R+ +L   R +SR+SPP PA A P+IRVSNNIAQL  PKE PK RQLLSLP FP    P
Sbjct: 5    MRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY--P 62

Query: 1252 LPGKNSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQ 1073
            LPGKN V   G+   +TAI W+KYYFD+I  S IQSHF KGLVQ+EC         E+  
Sbjct: 63   LPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLD--EKGN 120

Query: 1072 IPSLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKD 893
            +  +RKI+  E+ME GA+I++PVSVAE K+++RFDTIPSGTLYPNADEI YLQRLV YKD
Sbjct: 121  LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180

Query: 892  SAIMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRK 713
            SAI+VLNKPPKLPVKG LPVHNSMDALA AALSY Y++GPKLVHRLDRESSG+LLMGR K
Sbjct: 181  SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240

Query: 712  ESIAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLND 533
            ES+  L WLF            W +AC A  Q YWALVIG P E++GVI APLSKV+L+D
Sbjct: 241  ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300

Query: 532  GKTERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTP 353
            GKTERVI+A+ +SIE SQ+AITEYRVLGPTINGCSWIEL P T RKHQLR+HCAEALGTP
Sbjct: 301  GKTERVILANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360

Query: 352  IVGDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 173
            IVGDYKYGW+VH +WK MPRVD+EP++G+PYK+RRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 361  IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420

Query: 172  ILPNIAKFRYVLDGQPDKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            +LPNIAKF  V  G+    P  S   D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 421  VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
            sativus]
          Length = 471

 Score =  663 bits (1710), Expect = 0.0
 Identities = 326/471 (69%), Positives = 375/471 (79%)
 Frame = -1

Query: 1432 LRKGILPCIRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQP 1253
            +R+ +L   R +SR+SPP PA A P+IRVSNNIAQL  PKE PK RQLLSLP FP    P
Sbjct: 5    MRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGY--P 62

Query: 1252 LPGKNSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQ 1073
            LPGKN V   G+   +TAI W+KYYFD+I  S IQSHF KGLVQ+EC         E+  
Sbjct: 63   LPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLD--EKGN 120

Query: 1072 IPSLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKD 893
            +  +RKI+  E+ME GA+I++PVSVAE K+++RFDTIPSGTLYPNADEI YLQRLV YKD
Sbjct: 121  LKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVKYKD 180

Query: 892  SAIMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRK 713
            SAI+VLNKPPKLPVKG LPVHNSMDALA AALSY Y++GPKLVHRLDRESSG+LLMGR K
Sbjct: 181  SAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGRTK 240

Query: 712  ESIAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLND 533
            ES+  L WLF            W +AC A  Q YWALVIG P E++GVI APLSKV+L+D
Sbjct: 241  ESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVLLDD 300

Query: 532  GKTERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTP 353
            GKTERV++A+ +SIE SQ+AITEYRVLGPTINGCSWIEL P T RKHQLR+HCAEALGTP
Sbjct: 301  GKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360

Query: 352  IVGDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 173
            IVGDYKYGW+VH +WK MPRVD+EP++G+PYK+RRPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 361  IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420

Query: 172  ILPNIAKFRYVLDGQPDKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            +LPNIAKF  V  G+    P  S   D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 421  VLPNIAKFLNVFYGKGPNRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 471


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  662 bits (1709), Expect = 0.0
 Identities = 334/464 (71%), Positives = 376/464 (81%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1408 IRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVS 1229
            IR +SR+ PP  A A PVIRVSNN+AQL  PKE PKPRQLLSLP FP    PLPGK S  
Sbjct: 6    IRQYSRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGL--PLPGKKS-- 61

Query: 1228 PPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIK 1049
                  R+TAITW+KYYF+++  ++IQSHFNK LVQMECS+  D       ++  +RKIK
Sbjct: 62   -----ERVTAITWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIK 116

Query: 1048 PNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNK 869
            PNEVM  G +IYVPVSVAES+ISKRFD IPSGTL+PNADEI YLQRL    DSAI+VLNK
Sbjct: 117  PNEVMVEGTRIYVPVSVAESRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNK 172

Query: 868  PPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHW 689
            PP+LPVKG+LPVHNSMDALAAAALSY Y EGPKLVHRLDR+SSGLLLMGR KESI+ L W
Sbjct: 173  PPRLPVKGHLPVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEW 232

Query: 688  LFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVII 509
            LF            WNDACEA+ Q YWALVIGSP EK+G+I APLSKV+LNDGKTERVI+
Sbjct: 233  LFSNIKA-------WNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVIL 285

Query: 508  AHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYG 329
            AH +  + SQ+AITEYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYG
Sbjct: 286  AHQTGFQASQEAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 345

Query: 328  WYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKF 149
            W+VH +WK MP+V+IEP TGKPYK+RRPEGLDVQKGSV+SKVPLLHL CREL+LPNIAKF
Sbjct: 346  WFVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKF 405

Query: 148  RYVLDGQ-PDKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
              V D +  ++ P L SKPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 406  LRVFDRKSQNQDPALESKPDLLRFVARMPSHMKISWNLMSSYLV 449


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  662 bits (1708), Expect = 0.0
 Identities = 334/464 (71%), Positives = 376/464 (81%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1408 IRHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVS 1229
            IR +SR+ PP  A A PVIRVSNN+AQL  PKE PKPRQLLSLP FP    PLPGKNS  
Sbjct: 6    IRQYSRIRPPAAAEAGPVIRVSNNVAQLGGPKEGPKPRQLLSLPPFPGL--PLPGKNS-- 61

Query: 1228 PPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIK 1049
                  R+TAI+W+KYYF+++  ++IQSHFNK LVQMECS+  D       ++  +RKIK
Sbjct: 62   -----ERVTAISWVKYYFEEVHDNVIQSHFNKSLVQMECSNFGDPLAERDRKMKPMRKIK 116

Query: 1048 PNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNK 869
            PNEVM  G +IYVPVSVAES+ISKRFD IPSGTL+PNADEI YLQRL    DSAI+VLNK
Sbjct: 117  PNEVMVEGTRIYVPVSVAESRISKRFDVIPSGTLHPNADEIAYLQRL----DSAILVLNK 172

Query: 868  PPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHW 689
            PP+LPVKG+LPVHNSMDALAAAALSY Y EGPKLVHRLDR+SSGLLLMGR KESI+ L W
Sbjct: 173  PPRLPVKGHLPVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRTKESISHLEW 232

Query: 688  LFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVII 509
            LF            WNDACEA+ Q YWALVIGSP EK+G+I APLSKV+LNDGKTERVI+
Sbjct: 233  LFSNIKA-------WNDACEAKYQKYWALVIGSPKEKEGIICAPLSKVLLNDGKTERVIL 285

Query: 508  AHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYG 329
            AH +  + SQ+AITEYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYG
Sbjct: 286  AHQTGFQASQEAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYG 345

Query: 328  WYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKF 149
            W VH +WK MP+V+IEP TGKPYK+RRPEGLDVQKGSV+SKVPLLHL CREL+LPNIAKF
Sbjct: 346  WLVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDVQKGSVMSKVPLLHLQCRELVLPNIAKF 405

Query: 148  RYVLDGQPD-KHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
              V D + + + P L SKPD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 406  LRVFDRKSENQDPALESKPDLLRFVARMPSHMKISWNLMSSYLV 449


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
            gi|550341843|gb|ERP62872.1| hypothetical protein
            POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  658 bits (1698), Expect = 0.0
 Identities = 330/465 (70%), Positives = 386/465 (83%), Gaps = 2/465 (0%)
 Frame = -1

Query: 1408 IRHFSRLSPPKPARAAPVIRVS-NNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSV 1232
            +R +SR++P        V+RV+  N+A+L  PKE PKPRQLLSLP FP    PLPGK S+
Sbjct: 12   VRLYSRVAPQ-------VVRVTAKNVAKLGSPKEGPKPRQLLSLPPFPGF--PLPGKKSL 62

Query: 1231 SPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKI 1052
            +       +TAI+W+KYYFD+I  S+IQSHFNK LVQ+EC  SSD+ + E    P +RKI
Sbjct: 63   NA----CHVTAISWVKYYFDEIQDSVIQSHFNKSLVQIECPSSSDSVEMEGLGKP-MRKI 117

Query: 1051 KPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLN 872
            KP++VMEVGA+I++PVSVAE+ ISKRFDTIPSGTLYPNADEI+YLQRLV YKDSA++VLN
Sbjct: 118  KPSDVMEVGARIHIPVSVAETAISKRFDTIPSGTLYPNADEIEYLQRLVKYKDSALLVLN 177

Query: 871  KPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLH 692
            KPPK+PVKGN+P+HNSMDALAAAALSYGY+EGPKLVHRLDRESSGLLLMGR KESIA L 
Sbjct: 178  KPPKVPVKGNMPIHNSMDALAAAALSYGYDEGPKLVHRLDRESSGLLLMGRTKESIAHLQ 237

Query: 691  WLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVI 512
             LF            WNDACEA  Q YWALVIGSP +K+G+I A LSKV+L+DGKTERV+
Sbjct: 238  LLFSYINKAQSKCHAWNDACEATYQRYWALVIGSPKDKEGLISARLSKVLLDDGKTERVV 297

Query: 511  IAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKY 332
            +A  SS+E S+DA+TEYRVLGPTINGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKY
Sbjct: 298  LAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKY 357

Query: 331  GWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAK 152
            GW+VH +WK MPRVDIEP +GKPYK+R PEG+D+QKGSVL+KVPLLHLHCREL+LPNIAK
Sbjct: 358  GWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDIQKGSVLAKVPLLHLHCRELVLPNIAK 417

Query: 151  FRYVLDGQPDK-HPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            F  VLDG+ +  HP LS++PD+LRFVA MPSHMKISWNLMSS+LV
Sbjct: 418  FLDVLDGKSENVHPALSTRPDLLRFVASMPSHMKISWNLMSSFLV 462


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
            sinensis]
          Length = 471

 Score =  657 bits (1695), Expect = 0.0
 Identities = 335/471 (71%), Positives = 383/471 (81%), Gaps = 5/471 (1%)
 Frame = -1

Query: 1417 LPCIRHFSRLSPPKPARAAPVIRVSNN-IAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGK 1241
            L  IRH+SR+SPP+PA    VIRVS   +A L  PK  PKPRQLLSLP FP  +  LPGK
Sbjct: 12   LSSIRHYSRISPPRPA----VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPGHN--LPGK 65

Query: 1240 NSVSPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSL 1061
            +     G+   +TA++W+KYYFD++  S+IQSHFNKGLVQMEC++  D S  EQ Q+  +
Sbjct: 66   HW----GRQGHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGD-SFVEQGQMKPI 120

Query: 1060 RKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIM 881
            RKIK NEVME GA+I++PVS+ E +ISKR+DTIPSGTL PNADEIDYL+RLV Y+DSAI+
Sbjct: 121  RKIKTNEVMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAIL 180

Query: 880  VLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIA 701
            VLNKPPK+P+KGNLPVHNSMDALAAAALSY   EGPKLVHRLDRESSGLLLMGR KES++
Sbjct: 181  VLNKPPKVPLKGNLPVHNSMDALAAAALSYDNNEGPKLVHRLDRESSGLLLMGRTKESVS 240

Query: 700  QLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTE 521
             L WLF            WNDACEA  Q YWALVIGSP EKQG+I APLSKV+L+DGKTE
Sbjct: 241  LLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTE 300

Query: 520  RVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGD 341
            R+I+A  S +E SQ+A+TEYRVLGP INGCSWIEL PLT RKHQLRVHCAEALGTPIVGD
Sbjct: 301  RIILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGD 360

Query: 340  YKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPN 161
            YKYGW+VH +WK MPRVDIEP +GKPYK+RRP+GLDVQKGSVLSKVPLLHLHCREL+LPN
Sbjct: 361  YKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPN 420

Query: 160  IAKFRYVLDGQPDK-HPKLSSK---PDVLRFVAPMPSHMKISWNLMSSYLV 20
            IAKF  VL+ + D   P LSSK   PD+LRFVA MPSHMKISWNLMSSYLV
Sbjct: 421  IAKFINVLNQKSDNLFPTLSSKPDGPDLLRFVASMPSHMKISWNLMSSYLV 471


>gb|EYU23584.1| hypothetical protein MIMGU_mgv1a026780mg, partial [Mimulus guttatus]
          Length = 452

 Score =  655 bits (1689), Expect = 0.0
 Identities = 327/462 (70%), Positives = 372/462 (80%), Gaps = 3/462 (0%)
 Frame = -1

Query: 1396 SRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVSPPGQ 1217
            S++ PP PA    V+RVSNNIA L  PKE PKP+QLLSLP FP    PLPG++S S    
Sbjct: 1    SKIRPPPPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPPFPGN--PLPGRHSTSVE-- 56

Query: 1216 PARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIKPNEV 1037
               +TAI+WLKYYFDD+   +IQ HFNKGLV+MEC +SS  S+    Q  S RKIKP+E+
Sbjct: 57   --HVTAISWLKYYFDDVIPPVIQHHFNKGLVRMECLNSSGLSESYTGQTMSTRKIKPSEI 114

Query: 1036 MEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNKPPKL 857
            ME G ++YVPVSVAE+K+SKRFD IPSGTL+PNADEI YLQRL    DSAI+VLNKPPKL
Sbjct: 115  MEEGDRVYVPVSVAENKVSKRFDVIPSGTLHPNADEIMYLQRL----DSAILVLNKPPKL 170

Query: 856  PVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHWLFXX 677
            PVKGNL VHNSMDALAAAALSY Y+EGPKLVHRLDRESSGLLLMGR KESI+ LHWLF  
Sbjct: 171  PVKGNLLVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGLLLMGRTKESISYLHWLFSD 230

Query: 676  XXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVIIAHPS 497
                      W+DAC+A  Q YWALVIG PN+K+GVI APL+KV+LNDGKTE VI++H S
Sbjct: 231  VRKAASFSKEWSDACDAMYQRYWALVIGVPNQKEGVIFAPLTKVLLNDGKTEMVILSHNS 290

Query: 496  SIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYGWYVH 317
             +E SQ+AIT YRVLGP INGCSWIELHPLT RKHQLRVHCAEALGTPIVGDYKYGW+VH
Sbjct: 291  GLEASQEAITRYRVLGPMINGCSWIELHPLTRRKHQLRVHCAEALGTPIVGDYKYGWFVH 350

Query: 316  SKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFRYVL 137
            SKWK MPR++ EP TG+PYKMRRPEGLDVQKGSVLSKVPLLHLH RE++LPNI KF  + 
Sbjct: 351  SKWKQMPRLNFEPTTGEPYKMRRPEGLDVQKGSVLSKVPLLHLHSREMVLPNIEKFIELH 410

Query: 136  DGQPDKH---PKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
              +P  +   P+L +KPD+LRFVAPMP HMKISWNLMSSYLV
Sbjct: 411  KQKPGNYNVDPELCAKPDILRFVAPMPKHMKISWNLMSSYLV 452


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
            vesca subsp. vesca]
          Length = 469

 Score =  640 bits (1651), Expect = 0.0
 Identities = 325/465 (69%), Positives = 376/465 (80%), Gaps = 3/465 (0%)
 Frame = -1

Query: 1405 RHFSRLSPPKPARAAP--VIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSV 1232
            R +S  SPP PA AAP  +IRVSN++A+L  PK  PKPRQLLSLP FPA    LPGK S 
Sbjct: 16   RQYSSTSPPPPASAAPPPLIRVSNHVAKLGPPKAGPKPRQLLSLPPFPAGRH-LPGKKSY 74

Query: 1231 SPPGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKI 1052
               G  + +TA++WL+YYF +I  + I+SHFNKGLVQMEC    ++S G+      +RKI
Sbjct: 75   HD-GAVSHVTAVSWLRYYFHEIDDAAIRSHFNKGLVQMEC----ESSIGKH-----MRKI 124

Query: 1051 KPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLN 872
            +P+EVME GA++YV VS+AESK+S+RFD IPS TLYPNADEIDYLQRLV YKDSAI+VLN
Sbjct: 125  RPSEVMEEGARVYVAVSIAESKVSRRFDCIPSETLYPNADEIDYLQRLVKYKDSAIIVLN 184

Query: 871  KPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLH 692
            KPPKLPVKGN+PVHNSMDALAAAALSY Y+EGPKLVHRLDRESSG+LLMGR KES+  L 
Sbjct: 185  KPPKLPVKGNVPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLMGRTKESLYLLQ 244

Query: 691  WLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVI 512
             L+            WNDAC A+ Q YWALVIGSP EK+G+I APL+KV+L+DGKTERVI
Sbjct: 245  SLYTDINVGKSSCRAWNDACRAKCQRYWALVIGSPKEKEGLICAPLTKVLLDDGKTERVI 304

Query: 511  IAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKY 332
            +AH S +E SQ A+T+YRVLGPTINGCSWIEL PLT RKHQLRVHCAEALGTPIVGDYKY
Sbjct: 305  LAHQSGLEASQPALTQYRVLGPTINGCSWIELQPLTSRKHQLRVHCAEALGTPIVGDYKY 364

Query: 331  GWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAK 152
            GW+VH +WK MP +DIEP TG  YK+RRP GLDVQKGSV+SKVPLLHLHCREL+LPNIAK
Sbjct: 365  GWFVHRRWKQMPHIDIEPATGLQYKLRRPAGLDVQKGSVVSKVPLLHLHCRELVLPNIAK 424

Query: 151  FRYVLDGQPD-KHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            F  +LD + D ++   SSKPDVLRFVA MP+HMKISWNLMSSYLV
Sbjct: 425  FLCLLDQKLDNRYTVDSSKPDVLRFVASMPTHMKISWNLMSSYLV 469


>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
            gi|557086377|gb|ESQ27229.1| hypothetical protein
            EUTSA_v10018480mg [Eutrema salsugineum]
          Length = 478

 Score =  639 bits (1648), Expect = e-180
 Identities = 314/464 (67%), Positives = 375/464 (80%), Gaps = 2/464 (0%)
 Frame = -1

Query: 1405 RHFSRLSPPKPARAAPVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPLPGKNSVSP 1226
            R +SR++PP     + VIRV+NNIAQL  PK+ P PRQL+SLP FP    PLPGKN+   
Sbjct: 23   RRYSRVAPPP----STVIRVTNNIAQLGPPKKGPLPRQLMSLPPFPGH--PLPGKNA--G 74

Query: 1225 PGQPARITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQIPSLRKIKP 1046
              +   +TAI+W+KYY ++I    IQSHF KGLVQME     D S+ +Q  +  ++K+K 
Sbjct: 75   VDEDGHVTAISWVKYYLEEIHDKAIQSHFTKGLVQMEFRGRRDASREKQDGVRPIKKVKH 134

Query: 1045 NEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKDSAIMVLNKP 866
            NEVM++G KI++PVS+AE++ISKR+DTIPSGTLYPNADEI YLQRLV +KDSAI+VLNKP
Sbjct: 135  NEVMQIGDKIWLPVSIAETRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKP 194

Query: 865  PKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRKESIAQLHWL 686
            PKLPVKGN+P+HNSMDALAAAALS+G +EGP+L+HRLDRE+SGLL+MGR KESI  LH +
Sbjct: 195  PKLPVKGNVPIHNSMDALAAAALSFGKDEGPRLLHRLDRETSGLLVMGRTKESIDHLHSV 254

Query: 685  FXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLNDGKTERVIIA 506
            F            WN ACEA  Q YWALVIGSP +K+GVI AP+SKV+L+DGKT+RV++A
Sbjct: 255  FSDFKGRDSRCKAWNKACEAMYQQYWALVIGSPKDKEGVISAPISKVLLDDGKTDRVVLA 314

Query: 505  HPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTPIVGDYKYGW 326
              S  E SQ+AITEYRVLGP INGCSW+EL PLT RKHQLRVHCAEALGTPIVGDYKYGW
Sbjct: 315  RGSGFEASQEAITEYRVLGPMINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGW 374

Query: 325  YVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFR 146
            +VH KWK MP+VDIEP +GKPYK+RRPEGLD+QKGSVLSKVPLLHLHCRE++LPNIAKF 
Sbjct: 375  FVHKKWKQMPQVDIEPTSGKPYKLRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAKFL 434

Query: 145  YVLDGQ--PDKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            +VL+ Q     HP + SKPD+LRFVA MPSHMKISWN+MSSYLV
Sbjct: 435  HVLNNQEIDSLHPGIISKPDLLRFVASMPSHMKISWNIMSSYLV 478


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
            X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
            PREDICTED: RNA pseudouridine synthase 3,
            mitochondrial-like isoform X2 [Solanum tuberosum]
            gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
            pseudouridine synthase 3, mitochondrial-like isoform X3
            [Solanum tuberosum]
          Length = 475

 Score =  634 bits (1635), Expect = e-179
 Identities = 322/471 (68%), Positives = 374/471 (79%), Gaps = 4/471 (0%)
 Frame = -1

Query: 1420 ILPCIRHFSRLSPPKPARA---APVIRVSNNIAQLSCPKEEPKPRQLLSLPAFPAQHQPL 1250
            +L  +R FSR S    A+A    PVIRVSNNI  L   KE  KP QLLSLP FP    PL
Sbjct: 11   LLFLVRRFSR-SVGHSAQANHCEPVIRVSNNITHLGRQKEGAKPSQLLSLPPFPGH--PL 67

Query: 1249 PGKNSVSPPGQPA-RITAITWLKYYFDDIPASLIQSHFNKGLVQMECSDSSDTSKGEQAQ 1073
            PGK   + P QP+  +TAI+W+KYYFD+IP S+IQ+HFNKGLVQ+E ++   + +G   Q
Sbjct: 68   PGKKVATGPDQPSCHVTAISWIKYYFDEIPGSVIQTHFNKGLVQLEFNELFTSKEG---Q 124

Query: 1072 IPSLRKIKPNEVMEVGAKIYVPVSVAESKISKRFDTIPSGTLYPNADEIDYLQRLVMYKD 893
               LRKIK +EVMEVGA+I+VP+SVAE++ISKR+D IPSGTLYPNADEI YLQRLV YKD
Sbjct: 125  TRLLRKIKHSEVMEVGARIHVPISVAETRISKRYDVIPSGTLYPNADEIAYLQRLVFYKD 184

Query: 892  SAIMVLNKPPKLPVKGNLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRRK 713
             AI+VLNKPPKLP+KGNLPVHNSMDALAAAALSY Y+EGP+LVHRLDRESSGL LMGR +
Sbjct: 185  PAILVLNKPPKLPLKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLMGRTE 244

Query: 712  ESIAQLHWLFXXXXXXXXXXXTWNDACEARGQTYWALVIGSPNEKQGVIHAPLSKVVLND 533
            ESI+ LH LF            WNDAC +  Q YWALVIGSP EK+GVI APL+KV+L+D
Sbjct: 245  ESISHLHLLFSNTKKSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGVISAPLTKVLLDD 304

Query: 532  GKTERVIIAHPSSIEVSQDAITEYRVLGPTINGCSWIELHPLTGRKHQLRVHCAEALGTP 353
            G+TERV++A  S +E S +A+TEYR+LGP INGCSWIEL P T RKHQ+RVHCAEALGTP
Sbjct: 305  GRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKHQIRVHCAEALGTP 364

Query: 352  IVGDYKYGWYVHSKWKHMPRVDIEPMTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL 173
            IVGDYKYGW+VH KWK MPRVD+EP TGKPY+++RPEGLDVQKGSVLSKVPLLHLHCREL
Sbjct: 365  IVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVLSKVPLLHLHCREL 424

Query: 172  ILPNIAKFRYVLDGQPDKHPKLSSKPDVLRFVAPMPSHMKISWNLMSSYLV 20
            +LPNIAKF  +   +  KH   SSKPD+LRFVAPMPS MKISW LMSS L+
Sbjct: 425  VLPNIAKFIELHSRKTKKHSDYSSKPDLLRFVAPMPSPMKISWKLMSSCLI 475