BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00018389
         (2365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...  1004   0.0  
emb|CBI27406.3| unnamed protein product [Vitis vinifera]              981   0.0  
ref|XP_006484267.1| PREDICTED: putative pentatricopeptide repeat...   919   0.0  
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,...   910   0.0  
ref|XP_004297191.1| PREDICTED: putative pentatricopeptide repeat...   854   0.0  
ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat...   825   0.0  
ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   821   0.0  
ref|XP_002316000.2| pentatricopeptide repeat-containing family p...   813   0.0  
sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide...   749   0.0  
ref|XP_006417106.1| hypothetical protein EUTSA_v10009738mg, part...   748   0.0  
gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical p...   746   0.0  
ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp....   744   0.0  
ref|XP_006306771.1| hypothetical protein CARUB_v10008310mg [Caps...   739   0.0  
ref|XP_006348639.1| PREDICTED: putative pentatricopeptide repeat...   730   0.0  
ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis t...   722   0.0  
ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thal...   722   0.0  
ref|XP_006846807.1| hypothetical protein AMTR_s00148p00070910 [A...   707   0.0  
gb|EYU22585.1| hypothetical protein MIMGU_mgv1a026418mg, partial...   684   0.0  
gb|EMT28821.1| hypothetical protein F775_33038 [Aegilops tauschii]    644   0.0  
ref|XP_004239448.1| PREDICTED: putative pentatricopeptide repeat...   640   e-180

>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g13630-like [Vitis vinifera]
          Length = 829

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 499/773 (64%), Positives = 615/773 (79%)
 Frame = +3

Query: 45   HLRHWRSLLRPRKTLNLTHLTSLIISRPSFSATAAQDESIDTSISNPCDPIPEVLRGLKS 224
            H+  WRSLLR  K+LNL+ +TSL  ++ S SA    DES D SI N  D + ++L GL+S
Sbjct: 4    HIYPWRSLLR--KSLNLSPITSLGFTKHSVSAAKLHDESADASIPN--DAVRQILIGLRS 59

Query: 225  FGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQF 404
            FG  KFL   HF+TL   LN   VD+IL  LR  + DSAL  F+LLRNE+GFRHSR+S F
Sbjct: 60   FGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDSALFLFDLLRNEYGFRHSRVSWF 119

Query: 405  VVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYC 584
            +V H++A KGQ KELRR+L QM+EEEGS SAPSLCELL N+F++W+  ++VWDMLA  Y 
Sbjct: 120  IVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYS 179

Query: 585  KSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNT 764
            ++EMVHDALFVL KMK LN Q SI+TYNSL+YN+RHTD++WD+YNEIKA+ VP+N +TN 
Sbjct: 180  RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNP 239

Query: 765  IFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKY 944
            I IDGLC+Q++LQDAV F RET G+EF P VVSF+ LMSGFC MG VDVAKSFFCMM+KY
Sbjct: 240  ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299

Query: 945  GVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGA 1124
            G+ PDVYSYN L+HGLCVAGSMEEAL+F++DM+ HGVEPD+VTYNIL NGF +LGL+SGA
Sbjct: 300  GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359

Query: 1125 WKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSC 1304
            WK +Q+MLL GL PD VTYT+LICGHCQ GNIEE FKL E+ML+QG + SI+TY+ LLS 
Sbjct: 360  WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419

Query: 1305 LCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPN 1484
            LC+SGR++EA+ LL EM+ IGL PD +TYS+LIHG CK+G VE AI++Y EM SKRI PN
Sbjct: 420  LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 1485 PFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYE 1664
             F  SAI+SGL EK  I EA+ YF+++TKSD+   I+LYNIMIDGYAK G+I EA+R Y+
Sbjct: 480  SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539

Query: 1665 QIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREG 1844
            QI   G++P I TFNSLIYGFCK  KLAEA  LL T+ VH L P++VTYTTLMN YC EG
Sbjct: 540  QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 599

Query: 1845 KMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYN 2024
             M  +F++LHEME KA+ PT ITYTVV+KGLCK+ RL ES + L  M A+GL PDQITYN
Sbjct: 600  DMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYN 659

Query: 2025 TLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNK 2204
            T+IQ FC+  D++ AF L ++ML  +LQP PVTYNV+INGLC+ G+LK A  LL  LQ++
Sbjct: 660  TVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 719

Query: 2205 NIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            +I+LTK+AYTTIIKA+CAKG+ + A + F+QMVE G+E SIRDYSA+INRLCK
Sbjct: 720  SIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 772



 Score =  249 bits (635), Expect = 5e-63
 Identities = 139/521 (26%), Positives = 264/521 (50%), Gaps = 3/521 (0%)
 Frame = +3

Query: 558  WDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI---WDIYNEIK 728
            +++L +  C +  + +AL     M++   +  I TYN L    R   +I   W +   + 
Sbjct: 308  YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 729  ANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD 908
             N +  ++ T TI I G C+   ++++ +   +   +  K  +V+++ L+S  C  G +D
Sbjct: 368  LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A      M   G++PD+ +Y+ LIHGLC  G++EEA++  ++M    + P+    + ++
Sbjct: 428  EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAII 487

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
            +G    G +S A      +    +  + + Y ++I G+ + GNI E  +  ++++ +G  
Sbjct: 488  SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 547

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            P+I+T++ L+   C+ G++ EA+ LLD +K  GL P  VTY+ L++G+C++G +     +
Sbjct: 548  PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 607

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAK 1628
              EM +K I P    ++ ++ GLC++  + E+    + +    L  + + YN +I  + K
Sbjct: 608  LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 667

Query: 1629 HGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVT 1808
              D+ +A +L+ Q+    L P+  T+N LI G C    L +A  LL TL    +  + V 
Sbjct: 668  AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 727

Query: 1809 YTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDME 1988
            YTT++ A+C +G +       H+M E+    ++  Y+ VI  LCK+  + ++  F   M 
Sbjct: 728  YTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMML 787

Query: 1989 AKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQP 2111
              G+ PDQ     ++  F    D  + F +   M+   L P
Sbjct: 788  THGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  981 bits (2537), Expect = 0.0
 Identities = 493/773 (63%), Positives = 608/773 (78%)
 Frame = +3

Query: 45   HLRHWRSLLRPRKTLNLTHLTSLIISRPSFSATAAQDESIDTSISNPCDPIPEVLRGLKS 224
            H+  WRSLLR  K+LNL+ +TSL  ++ S SA    DES D SI N  D + ++L GL+S
Sbjct: 4    HIYPWRSLLR--KSLNLSPITSLGFTKHSVSAAKLHDESADASIPN--DAVRQILIGLRS 59

Query: 225  FGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQF 404
            FG  KFL   HF+TL   LN   VD+IL  LR  + DSAL  F+LLRNE+GFRHSR+S F
Sbjct: 60   FGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDSALFLFDLLRNEYGFRHSRVSWF 119

Query: 405  VVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYC 584
            +V H++A KGQ KELRR+L QM+EEEGS SAPSLCELL N+F++W+  ++VWDMLA  Y 
Sbjct: 120  IVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYS 179

Query: 585  KSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNT 764
            ++EMVHDALFVL KMK LN Q SI+TYNSL+YN+RHTD++WD+YNEIKA+ VP+N +TN 
Sbjct: 180  RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNP 239

Query: 765  IFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKY 944
            I IDGLC+Q++LQDAV F RET G+EF P VVSF+ LMSGFC MG VDVAKSFFCMM+KY
Sbjct: 240  ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299

Query: 945  GVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGA 1124
            G+ PDVYSYN L+HGLCVAGSMEEAL+F++DM+ HGVEPD+VTYNIL NGF +LGL+SGA
Sbjct: 300  GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359

Query: 1125 WKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSC 1304
            WK +Q+MLL GL PD VTYT+LICGHCQ GNIEE FKL E+ML+QG + SI+TY+ LLS 
Sbjct: 360  WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419

Query: 1305 LCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPN 1484
            LC+SGR++EA+ LL EM+ IGL PD +TYS        +G VE AI++Y EM SKRI PN
Sbjct: 420  LCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPN 471

Query: 1485 PFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYE 1664
             F  SAI+SGL EK  I EA+ YF+++TKSD+   I+LYNIMIDGYAK G+I EA+R Y+
Sbjct: 472  SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531

Query: 1665 QIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREG 1844
            QI   G++P I TFNSLIYGFCK  KLAEA  LL T+ VH L P++VTYTTLMN YC EG
Sbjct: 532  QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 591

Query: 1845 KMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYN 2024
             M  +F++LHEME KA+ PT ITYTVV+KGLCK+ RL ES + L  M A+GL PDQITYN
Sbjct: 592  DMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYN 651

Query: 2025 TLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNK 2204
            T+IQ FC+  D++ AF L ++ML  +LQP PVTYNV+INGLC+ G+LK A  LL  LQ++
Sbjct: 652  TVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 711

Query: 2205 NIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            +I+LTK+AYTTIIKA+CAKG+ + A + F+QMVE G+E SIRDYSA+INRLCK
Sbjct: 712  SIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCK 764



 Score =  229 bits (583), Expect = 6e-57
 Identities = 133/521 (25%), Positives = 258/521 (49%), Gaps = 3/521 (0%)
 Frame = +3

Query: 558  WDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI---WDIYNEIK 728
            +++L +  C +  + +AL     M++   +  I TYN L    R   +I   W +   + 
Sbjct: 308  YNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML 367

Query: 729  ANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD 908
             N +  ++ T TI I G C+   ++++ +   +   +  K  +V+++ L+S  C  G +D
Sbjct: 368  LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A      M   G++PD+ +Y+         G++EEA++  ++M    + P+    + ++
Sbjct: 428  EAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAII 479

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
            +G    G +S A      +    +  + + Y ++I G+ + GNI E  +  ++++ +G  
Sbjct: 480  SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 539

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            P+I+T++ L+   C+ G++ EA+ LLD +K  GL P  VTY+ L++G+C++G +     +
Sbjct: 540  PTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDM 599

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAK 1628
              EM +K I P    ++ ++ GLC++  + E+    + +    L  + + YN +I  + K
Sbjct: 600  LHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCK 659

Query: 1629 HGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVT 1808
              D+ +A +L+ Q+    L P+  T+N LI G C    L +A  LL TL    +  + V 
Sbjct: 660  AHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVA 719

Query: 1809 YTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDME 1988
            YTT++ A+C +G +       H+M E+    ++  Y+ VI  LCK+  + ++  F   M 
Sbjct: 720  YTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMML 779

Query: 1989 AKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQP 2111
              G+ PDQ     ++  F    D  + F +   M+   L P
Sbjct: 780  THGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  205 bits (522), Expect = 7e-50
 Identities = 136/560 (24%), Positives = 253/560 (45%), Gaps = 30/560 (5%)
 Frame = +3

Query: 312  FLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSA 491
            F +   VD A  FF ++  ++G      S  ++ H L   G ++E       M E  G  
Sbjct: 280  FCKMGSVDVAKSFFCMMI-KYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDM-ENHGVE 337

Query: 492  SAPSLCELLWNNFKEWNSTSLVWDMLANVYCKS---EMVHDALFVLGKMKDLNFQASIST 662
                   +L N F+     S  W ++  +       ++V   + + G  +  N + S   
Sbjct: 338  PDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKL 397

Query: 663  YNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKE 842
               ++                 +  +  ++ T T+ +  LCK  ++ +AV    E E   
Sbjct: 398  KEKML-----------------SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440

Query: 843  FKPCVVSFS---------------------------TLMSGFCNMGFVDVAKSFFCMMLK 941
             KP ++++S                            ++SG    G +  A+ +F  + K
Sbjct: 441  LKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 500

Query: 942  YGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSG 1121
              V  ++  YN +I G    G++ EA+     +   G+ P +VT+N L+ GFC  G ++ 
Sbjct: 501  SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 560

Query: 1122 AWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLS 1301
            A K +  + + GL P  VTYT L+ G+C+ G++   F +L EM A+  +P+ ITY+ ++ 
Sbjct: 561  AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 620

Query: 1302 CLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIP 1481
             LC+ GR++E++ LL  M A GL PD +TY+ +I  FCK   +++A Q++ +ML   + P
Sbjct: 621  GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 680

Query: 1482 NPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLY 1661
            +P  ++ +++GLC    + +A     TL    + +  V Y  +I  +   GD+  A+  +
Sbjct: 681  SPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFF 740

Query: 1662 EQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCRE 1841
             Q+   G   +I  ++++I   CK   + +A+     +  H + P       ++NA+ R 
Sbjct: 741  HQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRS 800

Query: 1842 GKMDVVFNLLHEMEEKAVAP 1901
            G  + VF +   M +  + P
Sbjct: 801  GDPNSVFEIFAMMIKCGLLP 820


>ref|XP_006484267.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g13630-like [Citrus sinensis]
          Length = 839

 Score =  919 bits (2374), Expect = 0.0
 Identities = 451/776 (58%), Positives = 583/776 (75%), Gaps = 4/776 (0%)
 Frame = +3

Query: 48   LRHWRSLLRPRKTLNLTHLTSLIISRPSFSATAAQDE----SIDTSISNPCDPIPEVLRG 215
            L+ W  L   +K   L+  +S I S+PS SA     +    S D+    P DP+PE++  
Sbjct: 2    LKKWILLNFRKKRQLLSPFSSSIFSKPSVSAAKLSSDEPAISFDSVDQTPADPVPEIIAN 61

Query: 216  LKSFGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRI 395
            L++ G +KF+D    + LIL L+   VDRI+D LR   +D A+ FFN L+   GF+HS  
Sbjct: 62   LRNLGFKKFIDGDDSKNLILRLSEFQVDRIIDCLRVESLDLAVTFFNWLKIHCGFKHSLF 121

Query: 396  SQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLAN 575
            + FV+ H+LA K   K LR +L+Q+L+E+GS SAPSLCELL ++F+ + S   VWDMLA 
Sbjct: 122  ASFVIAHVLAAKRSFKGLRLVLEQILQEQGSGSAPSLCELLLHSFRGFESNREVWDMLAF 181

Query: 576  VYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVH 755
            VY ++ MVHDA+FV+ KMK+L+ + SI TYNSL+YN+RHTD++WD+Y++IK +  PRNV+
Sbjct: 182  VYSRTGMVHDAVFVIAKMKELDLKVSIQTYNSLLYNLRHTDIMWDLYDDIKVSETPRNVY 241

Query: 756  TNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMM 935
            TN+I IDGLC+Q++LQDA+ F +ET GKEF P VVS + +MS +C +GF +VAK  FC+M
Sbjct: 242  TNSIVIDGLCQQSRLQDAILFLQETAGKEFGPSVVSLNAIMSRYCKLGFAEVAKGLFCLM 301

Query: 936  LKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLM 1115
            LKYG+ PD +SYN LIHGLC+AGSMEEAL+F++DM RHGVEPD +TY+IL  GF LL  +
Sbjct: 302  LKYGLHPDAFSYNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQI 361

Query: 1116 SGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSEL 1295
            SGAWK IQK+L++G  PD VTYT+LICG+CQ GN+EEG KL E ML+QGF+ ++I YS L
Sbjct: 362  SGAWKVIQKLLIKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVL 421

Query: 1296 LSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRI 1475
            LS +C+SGR++EALGLL EM+A+GL PD VTYSILI G CKQ KV +AIQ+Y EM SKRI
Sbjct: 422  LSSMCKSGRIDEALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRI 481

Query: 1476 IPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIR 1655
             PN FAH AIL GLCEK MI EAR YF++L  S+ + ++VLYNIMIDGY K G+I EA++
Sbjct: 482  SPNSFAHGAILLGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQ 541

Query: 1656 LYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYC 1835
            LY Q+    ++P+I TFNSLIYGFCKN K+A+AR LL T+ +H L PSAVTYTT MNAYC
Sbjct: 542  LYRQLIEKRISPSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYC 601

Query: 1836 REGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQI 2015
             EG +  +  LL EME KA+ PT +TYTVVIKGLCKQ +L+E+ + L DM   G+TPDQI
Sbjct: 602  EEGNIQRLLALLQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQI 661

Query: 2016 TYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTAL 2195
            TYNT+I+ FC+ KD+R AF LL++M L NL+P   TYN++I+GLC+ GDLK A  LL +L
Sbjct: 662  TYNTIIRSFCKCKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSL 721

Query: 2196 QNKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            Q  NI LTK+AYTTIIKA+CAKG+   A   F QMVE G+E SIRDYS++INRLCK
Sbjct: 722  QEHNISLTKVAYTTIIKAHCAKGDVHKAMTFFCQMVEKGFEISIRDYSSVINRLCK 777



 Score =  233 bits (595), Expect = 2e-58
 Identities = 136/527 (25%), Positives = 258/527 (48%), Gaps = 3/527 (0%)
 Frame = +3

Query: 558  WDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI---WDIYNEIK 728
            +++L +  C +  + +AL     M     +    TY+ L         I   W +  ++ 
Sbjct: 313  YNILIHGLCIAGSMEEALEFTNDMGRHGVEPDAITYSILAKGFHLLSQISGAWKVIQKLL 372

Query: 729  ANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD 908
                  ++ T T+ I G C+   +++ ++       + FK  V+++S L+S  C  G +D
Sbjct: 373  IKGSDPDIVTYTVLICGYCQIGNVEEGLKLREVMLSQGFKLNVIAYSVLLSSMCKSGRID 432

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A      M   G++PD+ +Y+ LI GLC    + +A+   ++M    + P+   +  ++
Sbjct: 433  EALGLLYEMEAVGLKPDLVTYSILIRGLCKQDKVHKAIQLYNEMCSKRISPNSFAHGAIL 492

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
             G C   +++ A      +++     D V Y ++I G+ + GNI E  +L  +++ +   
Sbjct: 493  LGLCEKEMITEARMYFDSLIMSNCIQDVVLYNIMIDGYVKLGNIGEAVQLYRQLIEKRIS 552

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            PSI+T++ L+   C++G+V +A  LLD +K  GL+P  VTY+  ++ +C++G ++R + +
Sbjct: 553  PSIVTFNSLIYGFCKNGKVADARRLLDTIKLHGLEPSAVTYTTFMNAYCEEGNIQRLLAL 612

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAK 1628
             +EM +K I P    ++ ++ GLC++  + EA    E +    +  + + YN +I  + K
Sbjct: 613  LQEMETKAIGPTHVTYTVVIKGLCKQWKLQEAVQLLEDMYVIGVTPDQITYNTIIRSFCK 672

Query: 1629 HGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVT 1808
              D+ +A +L  Q++   L P   T+N LI G C N  L  A  LL +L  H ++ + V 
Sbjct: 673  CKDLRKAFQLLNQMWLHNLEPTSATYNILIDGLCVNGDLKNADCLLVSLQEHNISLTKVA 732

Query: 1809 YTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDME 1988
            YTT++ A+C +G +        +M EK    ++  Y+ VI  LCK+  + ++  F   M 
Sbjct: 733  YTTIIKAHCAKGDVHKAMTFFCQMVEKGFEISIRDYSSVINRLCKRCLITKAKSFFCMML 792

Query: 1989 AKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYN 2129
            +    PDQ     ++  F +  D+ + F L   M+   L P     N
Sbjct: 793  SNAFPPDQEICEVMLIAFHQGGDLGSVFELAAVMIKSGLLPDKFLIN 839


>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 840

 Score =  910 bits (2351), Expect = 0.0
 Identities = 448/763 (58%), Positives = 577/763 (75%), Gaps = 6/763 (0%)
 Frame = +3

Query: 93   LTHLTSLIISRPSFSATAAQDESID------TSISNPCDPIPEVLRGLKSFGTEKFLDSP 254
            L  L+SL++S+ S  +TAA    +D      +   +P DP+P +L GLK    ++F+D  
Sbjct: 21   LVSLSSLVLSKSSSVSTAAASIVVDRPGTTPSVTPDPGDPVPVILSGLKYSVFKRFMDQC 80

Query: 255  HFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKG 434
             F+  I  LN S VD+I++ L   D DSA+ F+ LL NE GF+HSR S+ VV H+LA K 
Sbjct: 81   LFKEKIFMLNHSQVDQIIEHLNVEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKK 140

Query: 435  QLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALF 614
            +L ELR +L QML  EGS SAPSLCELL  +F+ W+S+++VWDMLA  Y +S MVHDALF
Sbjct: 141  RLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALF 200

Query: 615  VLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQA 794
            VL KMKDLNF  SI TYNSL+YN+RH++++WD+YNEIK +  P++ +T++I +DGLC+Q+
Sbjct: 201  VLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQS 260

Query: 795  KLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYN 974
            + QDAV FF++TEGKEF+P VVSF+T+MS +C +GFVDVAKSFFCMMLK+G+ PD YSYN
Sbjct: 261  RFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYN 320

Query: 975  TLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQ 1154
             LIHGLC+AGSM EALD  +DM+ HG+EPD+VTYNIL  GF LLGL++GAW  IQKML++
Sbjct: 321  ILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIK 380

Query: 1155 GLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEA 1334
            G  P+ VTYT+LICGHCQ GN+EE  KL +EM++ GFQ SII+ + LL  LC+S +V+ A
Sbjct: 381  GPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVA 440

Query: 1335 LGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSG 1514
              L  EM+A GL PD +TYS LIHG CKQG+V++AI +Y +M S RIIPN   H AIL G
Sbjct: 441  FKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMG 500

Query: 1515 LCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPN 1694
            LCEK  I +AR YF+ L  S+L ++I+LYNIMIDGY K G+  EA++LY+Q+   G++P 
Sbjct: 501  LCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560

Query: 1695 IFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLH 1874
            I TFNSL+YGFC N+KL++AR LL T+ +H L P+AVTYTTLMN YC EG M  +  LL 
Sbjct: 561  IVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620

Query: 1875 EMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVK 2054
            EM+ KA+ PT ITYTVVIKGLCKQ +L+ES + L DM+A GLTPDQ++YNT+IQ FC+ +
Sbjct: 621  EMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKAR 680

Query: 2055 DMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYT 2234
            DMR AF L D+MLL NL+P  VTYN++ING C+ GDLK A  LL +LQN+ + L K AYT
Sbjct: 681  DMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYT 740

Query: 2235 TIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            TIIKA+CAKG+   A + F QMVE G+E SIRDYSA+I RLCK
Sbjct: 741  TIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCK 783



 Score =  262 bits (670), Expect = 5e-67
 Identities = 147/515 (28%), Positives = 275/515 (53%), Gaps = 3/515 (0%)
 Frame = +3

Query: 558  WDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI---WDIYNEIK 728
            +++L +  C +  + +AL +   M++   +  + TYN L    R   +I   W+I  ++ 
Sbjct: 319  YNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKML 378

Query: 729  ANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD 908
                  N+ T T+ I G C+   +++A++ ++E     F+  ++S + L+   C    VD
Sbjct: 379  IKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVD 438

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
            VA   FC M   G+RPD+ +Y+TLIHGLC  G +++A+   + M  + + P+ + +  ++
Sbjct: 439  VAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAIL 498

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
             G C  G +S A      ++   L  D + Y ++I G+ +RGN  E  KL +++  +G  
Sbjct: 499  MGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGIS 558

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            P+I+T++ L+   C + ++++A  LLD +K  GL+P+ VTY+ L++ +C++G ++  +++
Sbjct: 559  PTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLEL 618

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAK 1628
              EM +K I P    ++ ++ GLC++  + E+    E +    L  + V YN +I  + K
Sbjct: 619  LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 1629 HGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVT 1808
              D+ +A +LY+++    L P   T+N LI GFC    L +A  LL +L   ++  +   
Sbjct: 679  ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYA 738

Query: 1809 YTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDME 1988
            YTT++ A+C +G +D       +M EK    ++  Y+ VI  LCK+  + E+  F   M 
Sbjct: 739  YTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMML 798

Query: 1989 AKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRML 2093
            + G+ PDQ  +  L+  F +   + + F LL  M+
Sbjct: 799  SDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMI 833



 Score =  160 bits (404), Expect = 3e-36
 Identities = 100/455 (21%), Positives = 219/455 (48%), Gaps = 3/455 (0%)
 Frame = +3

Query: 327  DVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSL 506
            +V+ AL  +  + + HGF+ S IS  V   +L    + +++    K   E E +   P L
Sbjct: 401  NVEEALKLYKEMIS-HGFQLSIISSTV---LLGSLCKSRQVDVAFKLFCEMEANGLRPDL 456

Query: 507  CELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNV 686
                           + +  L +  CK   V  A+ +  KM       +   + +++  +
Sbjct: 457  ---------------ITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501

Query: 687  RHTDMIWDI---YNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCV 857
                 I      ++ +  + +  ++    I IDG  K+   ++AV+ +++   K   P +
Sbjct: 502  CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561

Query: 858  VSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDD 1037
            V+F++LM GFC    +  A+     +  +G+ P+  +Y TL++  C  G+M+  L+   +
Sbjct: 562  VTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE 621

Query: 1038 MQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGN 1217
            M+   + P  +TY +++ G C    +  + + ++ M   GL PDQV+Y  +I   C+  +
Sbjct: 622  MKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARD 681

Query: 1218 IEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSI 1397
            + + F+L ++ML    +P+ +TY+ L++  C  G + +A  LL  ++   ++ +   Y+ 
Sbjct: 682  MRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTT 741

Query: 1398 LIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSD 1577
            +I   C +G V++A+  +R+M+ K    +   +SA++  LC++ ++ EA+ +F  +    
Sbjct: 742  IIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDG 801

Query: 1578 LVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDG 1682
            +  +  L+ ++++ + + G +N    L  ++   G
Sbjct: 802  VCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
 Frame = +3

Query: 546  TSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVR----HTDMIWDI 713
            T + ++ L   +C +  +  A  +L  +K    + +  TY +LM NV     +   + ++
Sbjct: 560  TIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM-NVYCEEGNMQSLLEL 618

Query: 714  YNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFST------- 872
             +E+KA  +     T T+ I GLCKQ KLQ++ +   + +     P  VS++T       
Sbjct: 619  LSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCK 678

Query: 873  ----------------------------LMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYS 968
                                        L++GFC  G +  A +    +    V  + Y+
Sbjct: 679  ARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYA 738

Query: 969  YNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKML 1148
            Y T+I   C  G +++A+ +   M   G E  +  Y+ ++   C   L++ A      ML
Sbjct: 739  YTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMML 798

Query: 1149 LQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGF 1265
              G+ PDQ  + +L+    Q G++   F+LL EM+  G+
Sbjct: 799  SDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837


>ref|XP_004297191.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g13630-like [Fragaria vesca subsp. vesca]
          Length = 827

 Score =  854 bits (2207), Expect = 0.0
 Identities = 433/775 (55%), Positives = 565/775 (72%), Gaps = 2/775 (0%)
 Frame = +3

Query: 45   HLRHWRSLLRPRKTLNLTH-LTSLIISRP-SFSATAAQDESIDTSISNPCDPIPEVLRGL 218
            H+  W+   +P + L ++   +SLI ++P SF+A  A D +   S +     + E++ GL
Sbjct: 4    HIHQWK---KPIQFLQISRTFSSLIFTKPPSFAAKPAVDPAAGPSSTAN---VAELITGL 57

Query: 219  KSFGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRIS 398
            ++ G  +     ++  +I  LN + VD I++ L   D +S   FFNLLRNE+GFRHSR S
Sbjct: 58   RTLGLGRIRGDHYYSNIISSLNQTQVDLIIERLNLEDPESGFGFFNLLRNEYGFRHSRAS 117

Query: 399  QFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANV 578
             F V H+L G+ + +ELR ++KQM++EEGS SA SLCELL + F++W S+ +VWD+LA  
Sbjct: 118  SFAVAHVLGGRRRFEELRLVMKQMVKEEGSGSATSLCELLLSRFRDWGSSGVVWDVLAFS 177

Query: 579  YCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHT 758
            Y +SEMV+DAL VL KMKDLN + S STYN L++N+RHTD++W++Y+ IK +  P N +T
Sbjct: 178  YSRSEMVYDALTVLAKMKDLNLRVSTSTYNCLLHNLRHTDIMWNVYDAIKESGTPENEYT 237

Query: 759  NTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMML 938
            ++I +DGLC+QA +QDAV F  E + KE  P VVS +T+MS FC +GFVD+AKSFFCM+ 
Sbjct: 238  SSILVDGLCEQASIQDAVSFLMEAQRKESGPSVVSVNTIMSRFCKLGFVDIAKSFFCMIF 297

Query: 939  KYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMS 1118
            KYG+ PD YSYN LIHGLCVAGS+EEAL+F+ DM+RHG+ PD VTYNIL  GF LLGLM+
Sbjct: 298  KYGLLPDSYSYNILIHGLCVAGSLEEALEFTQDMERHGLHPDTVTYNILCKGFRLLGLMN 357

Query: 1119 GAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELL 1298
            GA + IQKML++GL PD VTYT+LICGHC  GNIEE  KL EEML++GFQ S+I YS LL
Sbjct: 358  GAQQVIQKMLVKGLNPDHVTYTILICGHCHSGNIEEALKLREEMLSRGFQLSVILYSVLL 417

Query: 1299 SCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRII 1478
            S LC+SGR+ EAL L  EM+A+GL+PD +T SILIHG CKQG V+RA+QIYREM  KRII
Sbjct: 418  SSLCKSGRIEEALRLHYEMEAVGLEPDLITCSILIHGLCKQGTVQRAVQIYREMYLKRII 477

Query: 1479 PNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRL 1658
            P+  AH AIL GL ++  I EAR YF+ LT   +  +IVLYNIM+DGY K G+I  A+ L
Sbjct: 478  PHYSAHRAILLGLRKRGDISEARKYFDVLT--TITEDIVLYNIMMDGYVKLGNIAAALHL 535

Query: 1659 YEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCR 1838
            YEQ    G+TP + TFN+L+YG CK+ KL EA+ +L  + +H +  S VTYTTLMN YC 
Sbjct: 536  YEQTVEKGITPTVVTFNTLMYGLCKSGKLIEAKRMLTAIELHGMLLSPVTYTTLMNGYCE 595

Query: 1839 EGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQIT 2018
             G +  +  LL EM+ KAV PT +TYTV+IKGLCKQR+L+++   +  M AK L PDQIT
Sbjct: 596  WGNIHGMIKLLQEMKAKAVDPTHVTYTVIIKGLCKQRKLQKAVHLVEAMYAKDLIPDQIT 655

Query: 2019 YNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQ 2198
            YNT+IQ FC  +D++ AF L D ML  NL+P PVTYNV+INGLC+ GDL  A  LL  L 
Sbjct: 656  YNTIIQCFCRARDLKKAFQLHDEMLKHNLEPTPVTYNVLINGLCVYGDLNDADRLLDFLD 715

Query: 2199 NKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            ++NI LTK+AYTT+IKA+CAKG    A  LF++MVE G+E SIRDYS++INRLCK
Sbjct: 716  DRNINLTKVAYTTLIKAHCAKGYALRAVELFDRMVEKGFEISIRDYSSVINRLCK 770



 Score =  164 bits (414), Expect = 2e-37
 Identities = 119/485 (24%), Positives = 223/485 (45%), Gaps = 7/485 (1%)
 Frame = +3

Query: 261  RTLILYLNPSHVDR---ILDFLRGSDVDSALVFFNLLRNE---HGFRHSRISQFVVCHIL 422
            + L+  LNP HV     I       +++ AL     LR E    GF+ S I   V+   L
Sbjct: 365  KMLVKGLNPDHVTYTILICGHCHSGNIEEALK----LREEMLSRGFQLSVILYSVLLSSL 420

Query: 423  AGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVH 602
               G+++E  R+  +M   E     P L               +   +L +  CK   V 
Sbjct: 421  CKSGRIEEALRLHYEM---EAVGLEPDL---------------ITCSILIHGLCKQGTVQ 462

Query: 603  DALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKA-NRVPRNVHTNTIFIDG 779
             A+ +  +M         S + +++  +R    I +          +  ++    I +DG
Sbjct: 463  RAVQIYREMYLKRIIPHYSAHRAILLGLRKRGDISEARKYFDVLTTITEDIVLYNIMMDG 522

Query: 780  LCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPD 959
              K   +  A+  + +T  K   P VV+F+TLM G C  G +  AK     +  +G+   
Sbjct: 523  YVKLGNIAAALHLYEQTVEKGITPTVVTFNTLMYGLCKSGKLIEAKRMLTAIELHGMLLS 582

Query: 960  VYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQ 1139
              +Y TL++G C  G++   +    +M+   V+P  VTY +++ G C    +  A   ++
Sbjct: 583  PVTYTTLMNGYCEWGNIHGMIKLLQEMKAKAVDPTHVTYTVIIKGLCKQRKLQKAVHLVE 642

Query: 1140 KMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSG 1319
             M  + L PDQ+TY  +I   C+  ++++ F+L +EML    +P+ +TY+ L++ LC  G
Sbjct: 643  AMYAKDLIPDQITYNTIIQCFCRARDLKKAFQLHDEMLKHNLEPTPVTYNVLINGLCVYG 702

Query: 1320 RVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHS 1499
             +N+A  LLD +    ++   V Y+ LI   C +G   RA++++  M+ K    +   +S
Sbjct: 703  DLNDADRLLDFLDDRNINLTKVAYTTLIKAHCAKGYALRAVELFDRMVEKGFEISIRDYS 762

Query: 1500 AILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFND 1679
            ++++ LC++ +I EA+ +F  +    +  +  L  +M++ + + GD +    L  ++   
Sbjct: 763  SVINRLCKRSLITEAKYFFCMMLSDRIYPDQELCKVMLNAFRQDGDSSSLNELLAEMIKC 822

Query: 1680 GLTPN 1694
            G  P+
Sbjct: 823  GFLPD 827


>ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  825 bits (2131), Expect = 0.0
 Identities = 411/757 (54%), Positives = 548/757 (72%), Gaps = 3/757 (0%)
 Frame = +3

Query: 102  LTSLIISRPSFSATAAQDE--SIDTS-ISNPCDPIPEVLRGLKSFGTEKFLDSPHFRTLI 272
            L+S+I++RPS S +AA+ E  ++ TS +S+  D + E+L GL S G   ++   +FRT++
Sbjct: 18   LSSVILARPSVSVSAARLEPATVTTSFVSDQNDSVREILIGLNSLGFRAYVGGCNFRTVV 77

Query: 273  LYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELR 452
              L+ + VD +LD LR    D A+ FF  L NE+GFRHS  SQFVV HILAGKG+ KEL 
Sbjct: 78   STLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELD 137

Query: 453  RILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMK 632
             ++K ++ ++G  SA  +C+LL   F+ W+S  LVWDMLA  Y + EM+HDALFV+ KMK
Sbjct: 138  SVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMK 197

Query: 633  DLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAV 812
            DLNFQAS+ TYNSL++N+RHTD++WD+YNEIK +  P++  T +I I GLC+Q+KL+DA+
Sbjct: 198  DLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAI 257

Query: 813  RFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGL 992
             F  ++  K   P +VS +T+MS FC +G +DVA+SFFC+M+K G+  D +SYN L+HGL
Sbjct: 258  SFLHDSN-KVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGL 316

Query: 993  CVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQ 1172
            CVAGSM+EAL F+DDM++HGVEPD+VTYN L  GF LLGLMSGA K +QKMLLQGL PD 
Sbjct: 317  CVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDL 376

Query: 1173 VTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDE 1352
            VTYT LICGHCQ GNIEE  KL +E L++GF+ ++I Y+ LLSCLC+ GR+ EAL L DE
Sbjct: 377  VTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDE 436

Query: 1353 MKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRM 1532
            M+ + L+PD + YSILIHG CK+G V+RA Q+Y +M  KR  P+ FA  A+L GL +   
Sbjct: 437  METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGN 496

Query: 1533 ILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNS 1712
            I EAR YF+T T+ DL+ ++VLYNIMIDGY +   I EA++LY ++   G+TP++ TFN+
Sbjct: 497  ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNT 556

Query: 1713 LIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKA 1892
            LI GFC+   L EAR +L+ + +  L PS VTYTTLMNAYC  G M  +F+ LHEME  A
Sbjct: 557  LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 1893 VAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAF 2072
            V PT +TYTV+IKGLC+Q ++ ES + L  M AKGL PD +TYNT+IQ FC+ K++  A 
Sbjct: 617  VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676

Query: 2073 CLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTIIKAY 2252
             L + MLL N  P  VTY V+IN LC+ GDLK    ++ +++++NI L K+ Y TIIKA+
Sbjct: 677  QLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAH 736

Query: 2253 CAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            CAKG    A   FNQM+  G+  SIRDYSA+INRLCK
Sbjct: 737  CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCK 773


>ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g13630-like [Cucumis
            sativus]
          Length = 830

 Score =  821 bits (2120), Expect = 0.0
 Identities = 410/757 (54%), Positives = 546/757 (72%), Gaps = 3/757 (0%)
 Frame = +3

Query: 102  LTSLIISRPSFSATAAQDE--SIDTS-ISNPCDPIPEVLRGLKSFGTEKFLDSPHFRTLI 272
            L+S+I++RPS S +AA+ E  ++ TS +S+  D + E+L GL S G   ++   +FRT++
Sbjct: 18   LSSVILARPSVSVSAARLEPATVTTSFVSDQNDSVREILIGLNSLGFRAYVGGCNFRTVV 77

Query: 273  LYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELR 452
              L+ + VD +LD LR    D A+ FF  L NE+GFRHS  SQFVV HILAGKG+ KEL 
Sbjct: 78   STLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELD 137

Query: 453  RILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMK 632
             ++K ++ ++G  SA  +C+LL   F+ W+S  LVWDMLA  Y + EM+HDALFV+ KMK
Sbjct: 138  SVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMK 197

Query: 633  DLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAV 812
            DLNFQAS+ TYNSL++N+RHTD++WD+YNEIK +  P++  T +I I GLC+Q+KL+DA+
Sbjct: 198  DLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAI 257

Query: 813  RFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGL 992
             F  ++  K   P +VS +T+MS FC +G +DVA+S FC+M+K G+  D +SYN L+HGL
Sbjct: 258  SFLHDSN-KVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGL 316

Query: 993  CVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQ 1172
            CVAGSM+EAL F+DDM++HGVEPD+VTYN L  GF LLGLMSGA K +QKMLLQGL PD 
Sbjct: 317  CVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDL 376

Query: 1173 VTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDE 1352
            VTYT LICGHCQ GNIEE  KL +E L++GF+ ++I Y+ LLSCLC+ GR+ EAL L DE
Sbjct: 377  VTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDE 436

Query: 1353 MKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRM 1532
            M+ + L+PD + YSILIHG CK+G V+RA Q+Y +M  KR  P+ FA  A+L GL +   
Sbjct: 437  METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGN 496

Query: 1533 ILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNS 1712
            I EAR YF+T T+ DL+ ++VLYNIMIDGY +   I EA++LY ++   G+TP++ TFN+
Sbjct: 497  ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNT 556

Query: 1713 LIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKA 1892
            LI GFC+   L EAR +L+ + +  L PS VTYTTLMNAYC  G M  +F+ LHEME  A
Sbjct: 557  LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 1893 VAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAF 2072
            V PT +TYTV+IKGLC+Q ++ ES + L  M AKGL PD +TYNT+IQ FC+ K++  A 
Sbjct: 617  VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676

Query: 2073 CLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTIIKAY 2252
             L + MLL N  P  VTY V+IN LC+ GDLK    ++ +++++NI L K  Y TIIKA+
Sbjct: 677  QLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAH 736

Query: 2253 CAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            CAKG    A   FNQM+  G+  SIRDYSA+INRLCK
Sbjct: 737  CAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCK 773


>ref|XP_002316000.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550329818|gb|EEF02171.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 721

 Score =  813 bits (2100), Expect = 0.0
 Identities = 403/696 (57%), Positives = 522/696 (75%), Gaps = 1/696 (0%)
 Frame = +3

Query: 279  LNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRI 458
            LN + +D +++ L   + D    F++L RNE GF+HSR+S+F+V H+LA K + K+LR +
Sbjct: 2    LNQAQMDDVIENLSVQNADFVADFYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLV 61

Query: 459  LKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDL 638
            L QML+EE +                                 S MVHDALFVL KMK+ 
Sbjct: 62   LDQMLQEEVA---------------------------------SRMVHDALFVLVKMKEQ 88

Query: 639  NFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRF 818
            N + SI TYNSL+YN+RHTD++WD+YN+IK +  P++  T++I +DGLC Q++ +DAV F
Sbjct: 89   NLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLF 148

Query: 819  FRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCV 998
             R+ +GKEF P VVSF+T+MS +C +G  DVAKSFFCMMLKYG+ PD YSYN LIHGL V
Sbjct: 149  LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 208

Query: 999  AGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLL-QGLKPDQV 1175
            AGSMEEAL+ ++DM++ G++PD+VTY I+  GF LLGLMSGA + IQKML  +GLKPD V
Sbjct: 209  AGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLV 268

Query: 1176 TYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEM 1355
            TYT+LICGHCQ GNIEE  +L  ++L+ GFQ ++I YS LLS LC+ G+V+EAL LL EM
Sbjct: 269  TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 328

Query: 1356 KAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMI 1535
            +A  L PD VTYSILIHG CKQGKV++AIQ+Y+EM   RI PN FAHS IL GLCEK M+
Sbjct: 329  EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGML 388

Query: 1536 LEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSL 1715
             +AR YF++L  S+L  ++ LYNIMIDGY K GD+ EA+RLY+++ +  +TP+I TFNSL
Sbjct: 389  SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 448

Query: 1716 IYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAV 1895
            IYGFCKN+K+ EAR LL+++ +H L PSAVTYTTLMNAYC EG ++ +  LL EM  K +
Sbjct: 449  IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 508

Query: 1896 APTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFC 2075
             PTV+TYTVVIKGLCKQR+L+ES + L DM AKGL PDQITYNT+IQ FC+ KDMR AF 
Sbjct: 509  EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 568

Query: 2076 LLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTIIKAYC 2255
            LLD ML+ NL+P P TYNV+I+GLC  GD++ A  +L +LQ++NI LTK+AYTT+IKA+C
Sbjct: 569  LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 628

Query: 2256 AKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
             KG+ + A  +F+QMVE G+E SI+DYSA+INRLCK
Sbjct: 629  VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 664



 Score =  242 bits (617), Expect = 6e-61
 Identities = 155/608 (25%), Positives = 294/608 (48%), Gaps = 29/608 (4%)
 Frame = +3

Query: 369  EHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSL----------CEL- 515
            + G   S  +  ++   L G+ + ++    L+Q    +G   APS+          C+L 
Sbjct: 119  DSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQ---NDGKEFAPSVVSFNTIMSRYCKLG 175

Query: 516  LWNNFKEWNSTSLVWDMLANVYCKSEMVH---------DALFVLGKMKDLNFQASISTYN 668
            L +  K +    L + +L + Y  + ++H         +AL +   M+    Q  + TY 
Sbjct: 176  LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYK 235

Query: 669  ---------SLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFF 821
                      LM   R       I   +    +  ++ T T+ I G C+   +++A+R  
Sbjct: 236  IVAKGFHLLGLMSGAREI-----IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLR 290

Query: 822  RETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVA 1001
            R+     F+  V+ +S L+S  C  G VD A      M    ++PD+ +Y+ LIHGLC  
Sbjct: 291  RDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQ 350

Query: 1002 GSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTY 1181
            G +++A+    +M  + + P+   ++ ++ G C  G++S A      +++  L+PD   Y
Sbjct: 351  GKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLY 410

Query: 1182 TLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKA 1361
             ++I G+ + G++EE  +L + +  +   PSI+T++ L+   C++ +V EA  LL+ +K 
Sbjct: 411  NIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKL 470

Query: 1362 IGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILE 1541
             GL+P  VTY+ L++ +C++G + +  ++  EM  K I P    ++ ++ GLC++R + E
Sbjct: 471  HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEE 530

Query: 1542 ARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIY 1721
            +    E +    L  + + YN +I  + K  D+ +A  L + +    L P   T+N LI 
Sbjct: 531  SVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLID 590

Query: 1722 GFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAP 1901
            G C+   + +A  +L +L    +  + V YTT++ A+C +G       + H+M EK    
Sbjct: 591  GLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEV 650

Query: 1902 TVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLL 2081
            ++  Y+ VI  LCK+  + E+  +   M + G++PDQ  +  ++  F     + + F LL
Sbjct: 651  SIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 710

Query: 2082 DRMLLLNL 2105
              M+   L
Sbjct: 711  AVMIKFGL 718



 Score = 73.2 bits (178), Expect = 5e-10
 Identities = 52/269 (19%), Positives = 112/269 (41%), Gaps = 3/269 (1%)
 Frame = +3

Query: 372  HGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTS 551
            HG   S ++   + +    +G + +L  +L +M                  N K+   T 
Sbjct: 471  HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEM------------------NLKDIEPTV 512

Query: 552  LVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMY---NVRHTDMIWDIYNE 722
            + + ++    CK   + +++ +L  M+         TYN+++      +     +++ ++
Sbjct: 513  VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 572

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGF 902
            +  + +     T  + IDGLC+   ++DA R     + +      V+++T++   C  G 
Sbjct: 573  MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGD 632

Query: 903  VDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNI 1082
               A   F  M++ G    +  Y+ +I+ LC    + EA  +   M   GV PD   + +
Sbjct: 633  AQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEM 692

Query: 1083 LVNGFCLLGLMSGAWKAIQKMLLQGLKPD 1169
            ++N F   G +   ++ +  M+  GL  D
Sbjct: 693  MLNAFHRAGHVHSVFELLAVMIKFGLLHD 721


>sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
            At1g13630
          Length = 826

 Score =  749 bits (1934), Expect = 0.0
 Identities = 379/784 (48%), Positives = 534/784 (68%), Gaps = 15/784 (1%)
 Frame = +3

Query: 57   WRSLLRPRKTLNLTHLTSLIISRPSFSATAAQDESIDT--SISNPCDPIPEVLRGLKSFG 230
            W +    + + +L+  +SL+ ++ SFS     DES+ T  S S+      E+L G+K  G
Sbjct: 5    WIAFNSSKVSRSLSPFSSLLFTKSSFSVAKMDDESLPTTNSTSDHRGFYKEILFGMKKIG 64

Query: 231  TEKFLDSPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVV 410
              +FL   HFR L+  L   HV+ I+D L     D ++ FF  LR+ + FRHS  S  +V
Sbjct: 65   FREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLV 124

Query: 411  CHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKS 590
             H+LAG+ + KEL+ IL+Q+L+EEG+     LCELL N+F++W ST LVWDML  +  + 
Sbjct: 125  SHVLAGQRRFKELQVILEQLLQEEGT-----LCELLSNSFRKWESTGLVWDMLLFLSSRL 179

Query: 591  EMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIF 770
             MV D+L++L KMKD N   S  +YNS++Y+ R TD +WD+Y EIK     +N HT +  
Sbjct: 180  RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK----DKNEHTYSTV 235

Query: 771  IDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGV 950
            +DGLC+Q KL+DAV F R +E K+  P VVSF+++MSG+C +GFVD+AKSFFC +LK G+
Sbjct: 236  VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL 295

Query: 951  RPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWK 1130
             P VYS+N LI+GLC+ GS+ EAL+ + DM +HGVEPD VTYNIL  GF LLG++SGAW+
Sbjct: 296  VPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWE 355

Query: 1131 AIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ-PSIITYSELLSCL 1307
             I+ ML +GL PD +TYT+L+CG CQ GNI+ G  LL++ML++GF+  SII  S +LS L
Sbjct: 356  VIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGL 415

Query: 1308 CRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNP 1487
            C++GR++EAL L ++MKA GL PD V YSI+IHG CK GK + A+ +Y EM  KRI+PN 
Sbjct: 416  CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 475

Query: 1488 FAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQ 1667
              H A+L GLC+K M+LEAR+  ++L  S   ++IVLYNI+IDGYAK G I EA+ L++ 
Sbjct: 476  RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535

Query: 1668 IFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGK 1847
            +   G+TP++ TFNSLIYG+CK + +AEAR +L  + ++ LAPS V+YTTLM+AY   G 
Sbjct: 536  VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 595

Query: 1848 MDVVFNLLHEMEEKAVAPTVITYTVVIKGLC------------KQRRLKESFRFLGDMEA 1991
               +  L  EM+ + + PT +TY+V+ KGLC            ++R  ++  + L DME+
Sbjct: 596  TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 655

Query: 1992 KGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKG 2171
            +G+ PDQITYNT+IQ  C VK +  AF  L+ M   NL     TYN++I+ LC+ G ++ 
Sbjct: 656  EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 715

Query: 2172 AFGLLTALQNKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIIN 2351
            A   + +LQ +N+ L+K AYTT+IKA+C KG+P MA  LF+Q++  G+  SIRDYSA+IN
Sbjct: 716  ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 775

Query: 2352 RLCK 2363
            RLC+
Sbjct: 776  RLCR 779



 Score =  138 bits (347), Expect = 1e-29
 Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 15/387 (3%)
 Frame = +3

Query: 582  CKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHT---DMIWDIYNEIKANRVPRNV 752
            CK+  + +AL +  +MK       +  Y+ +++ +      DM   +Y+E+   R+  N 
Sbjct: 416  CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 475

Query: 753  HTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCM 932
             T+   + GLC++  L +A               +V ++ ++ G+   G ++ A   F +
Sbjct: 476  RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 535

Query: 933  MLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGL 1112
            +++ G+ P V ++N+LI+G C   ++ EA    D ++ +G+ P +V+Y  L++ +   G 
Sbjct: 536  VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 595

Query: 1113 MSGAWKAIQKMLLQGLKPDQVTYTLLI-----------CGHCQRGNIEEGFKL-LEEMLA 1256
                 +  ++M  +G+ P  VTY+++            C H  R  I E  K  L +M +
Sbjct: 596  TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 655

Query: 1257 QGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVER 1436
            +G  P  ITY+ ++  LCR   ++ A   L+ MK+  LD    TY+ILI   C  G + +
Sbjct: 656  EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 715

Query: 1437 AIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMID 1616
            A      +  + +  + FA++ ++   C K     A   F  L      V+I  Y+ +I+
Sbjct: 716  ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 775

Query: 1617 GYAKHGDINEAIRLYEQIFNDGLTPNI 1697
               +   +NE+   +  + + G++P++
Sbjct: 776  RLCRRHLVNESKFFFCLMLSQGISPDL 802



 Score =  123 bits (308), Expect = 4e-25
 Identities = 79/375 (21%), Positives = 171/375 (45%), Gaps = 21/375 (5%)
 Frame = +3

Query: 552  LVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNE 722
            + + ++ +  CK      AL++  +M D     +  T+ +L+  +    M+ +   + + 
Sbjct: 441  VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 500

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGF 902
            + ++    ++    I IDG  K   +++A+  F+        P V +F++L+ G+C    
Sbjct: 501  LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 560

Query: 903  VDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNI 1082
            +  A+    ++  YG+ P V SY TL+      G+ +   +   +M+  G+ P  VTY++
Sbjct: 561  IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 620

Query: 1083 LVNGFCLLGLMSGAWK------------------AIQKMLLQGLKPDQVTYTLLICGHCQ 1208
            +  G C        WK                   ++ M  +G+ PDQ+TY  +I   C+
Sbjct: 621  IFKGLCR------GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 674

Query: 1209 RGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVT 1388
              ++   F  LE M ++    S  TY+ L+  LC  G + +A   +  ++   +      
Sbjct: 675  VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 734

Query: 1389 YSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLT 1568
            Y+ LI   C +G  E A++++ ++L +    +   +SA+++ LC + ++ E++ +F  + 
Sbjct: 735  YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLML 794

Query: 1569 KSDLVVNIVLYNIMI 1613
               +  ++ +  +MI
Sbjct: 795  SQGISPDLDICEVMI 809



 Score =  114 bits (284), Expect = 3e-22
 Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 17/337 (5%)
 Frame = +3

Query: 420  LAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMV 599
            L  KG L E R +L  ++     +S  +L  +L+N             ++ + Y KS  +
Sbjct: 485  LCQKGMLLEARSLLDSLI-----SSGETLDIVLYN-------------IVIDGYAKSGCI 526

Query: 600  HDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNEIKANRVPRNVHTNTIF 770
             +AL +   + +     S++T+NSL+Y    T  I +   I + IK   +  +V + T  
Sbjct: 527  EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586

Query: 771  IDGL--CKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFC------NMGFV------D 908
            +D    C   K  D +R  RE + +   P  V++S +  G C      N   V      +
Sbjct: 587  MDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 644

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
              K     M   G+ PD  +YNT+I  LC    +  A  F + M+   ++    TYNIL+
Sbjct: 645  KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 704

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
            +  C+ G +  A   I  +  Q +   +  YT LI  HC +G+ E   KL  ++L +GF 
Sbjct: 705  DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 764

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPD 1379
             SI  YS +++ LCR   VNE+      M + G+ PD
Sbjct: 765  VSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801


>ref|XP_006417106.1| hypothetical protein EUTSA_v10009738mg, partial [Eutrema salsugineum]
            gi|557094877|gb|ESQ35459.1| hypothetical protein
            EUTSA_v10009738mg, partial [Eutrema salsugineum]
          Length = 773

 Score =  748 bits (1930), Expect = 0.0
 Identities = 378/761 (49%), Positives = 530/761 (69%), Gaps = 4/761 (0%)
 Frame = +3

Query: 93   LTHLTSLIISRPSFSATAAQDESIDT--SISNPCDPI-PEVLRGLKSFGTEKFLDSPHFR 263
            L+   SL++++ SFS     DE + T  S S+  D    E+L G+K  G  ++L   HFR
Sbjct: 17   LSPFPSLLLTKSSFSVAKLDDEPLSTTNSTSDHGDCFYQEILFGMKKKGFREYLHGHHFR 76

Query: 264  TLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLK 443
             L+  L   HV+ I+  L     D ++ FF  L++ +GFRHS +S  +V HILAG+ + K
Sbjct: 77   GLVSDLRQFHVEEIMGELMSESPDLSVWFFKELKDVYGFRHSSLSTLLVAHILAGQRRFK 136

Query: 444  ELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLG 623
            EL+ IL+Q+L+EEG             NF++W+ST+LVWDML  +  +S+M+ D+ ++L 
Sbjct: 137  ELQVILEQLLQEEG-------------NFRKWDSTNLVWDMLLFLSSRSKMIDDSHYILE 183

Query: 624  KMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQ 803
            KMKDLN   S   YN+++YN R TD +WD+YN+I A    +N HT +  +DGLC+Q KL+
Sbjct: 184  KMKDLNLSVSTQAYNTILYNFRETDKMWDVYNKIDA----KNEHTYSTVVDGLCRQQKLE 239

Query: 804  DAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLI 983
            DA  F R +E K+  P VVSF+++MS +C +GFV VAKSFFC +LK G+ P VYS+N LI
Sbjct: 240  DAAFFLRTSEWKDCGPSVVSFNSIMSTYCKLGFVGVAKSFFCTLLKCGLVPSVYSHNILI 299

Query: 984  HGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLK 1163
            +GLC+AGS+ EAL+F+D M +HGVEPD VTYNIL  GF LLG+++   + I++ML +GL 
Sbjct: 300  NGLCLAGSIGEALEFADGMNQHGVEPDTVTYNILAKGFHLLGMITWVSEVIEQMLGKGLS 359

Query: 1164 PDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ-PSIITYSELLSCLCRSGRVNEALG 1340
            PD +TYT+L+C HCQ GNIE+G +LL+EML++GF+  SII  S +LS LC++GR+NEAL 
Sbjct: 360  PDAITYTILLCAHCQLGNIEKGLRLLKEMLSRGFELNSIIPCSVMLSGLCKTGRINEALS 419

Query: 1341 LLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLC 1520
            L  EMKA GL PD V YSI+IHG C+ G+ + A+ ++ EM SKRI+PN     A+L GLC
Sbjct: 420  LFYEMKANGLRPDLVAYSIVIHGLCRLGEFDMAVWLFDEMRSKRILPNSRTLGAMLLGLC 479

Query: 1521 EKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIF 1700
            +K M+LEARA  ++L  +D  ++I+LYNI+IDGYAK+G I EA+ L+  +   G+TPN+ 
Sbjct: 480  QKGMLLEARALLDSLISTDCTLDIILYNIVIDGYAKYGCIEEALELFRVVIESGITPNVS 539

Query: 1701 TFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEM 1880
            TFNSLIYG+CK +K+A+AR +L  + ++ L PS V+YTTLMNAY   G  + V  L  EM
Sbjct: 540  TFNSLIYGYCKTRKIAQARKILDDIKLYGLVPSVVSYTTLMNAYADCGNTESVDELRLEM 599

Query: 1881 EEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDM 2060
            + K + PT  TY+V++KGLC  R+LK+  +   DM ++G+TPDQITYNT+IQ  C VKD+
Sbjct: 600  KAKGITPTNFTYSVIMKGLCIGRKLKKYKQVRRDMASEGITPDQITYNTMIQSLCRVKDL 659

Query: 2061 RAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTI 2240
              AF L + M+  NL P P TYN++I+GLC  G +K A   L  LQ +++ L+K AYTT+
Sbjct: 660  SGAFELFEEMISQNLDPTPATYNILIDGLCFYGYIKKADRFLYWLQERDVSLSKFAYTTL 719

Query: 2241 IKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            IKA+C KG P MA +LF Q+++ G++ SIRDYSA+INRLC+
Sbjct: 720  IKAHCVKGVPEMAVMLFLQLLDRGFDVSIRDYSAVINRLCR 760



 Score =  202 bits (514), Expect = 6e-49
 Identities = 123/475 (25%), Positives = 233/475 (49%), Gaps = 4/475 (0%)
 Frame = +3

Query: 561  DMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI-W--DIYNEIKA 731
            ++L N  C +  + +AL     M     +    TYN L        MI W  ++  ++  
Sbjct: 296  NILINGLCLAGSIGEALEFADGMNQHGVEPDTVTYNILAKGFHLLGMITWVSEVIEQMLG 355

Query: 732  NRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFK-PCVVSFSTLMSGFCNMGFVD 908
              +  +  T TI +   C+   ++  +R  +E   + F+   ++  S ++SG C  G ++
Sbjct: 356  KGLSPDAITYTILLCAHCQLGNIEKGLRLLKEMLSRGFELNSIIPCSVMLSGLCKTGRIN 415

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A S F  M   G+RPD+ +Y+ +IHGLC  G  + A+   D+M+   + P+  T   ++
Sbjct: 416  EALSLFYEMKANGLRPDLVAYSIVIHGLCRLGEFDMAVWLFDEMRSKRILPNSRTLGAML 475

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
             G C  G++  A   +  ++      D + Y ++I G+ + G IEE  +L   ++  G  
Sbjct: 476  LGLCQKGMLLEARALLDSLISTDCTLDIILYNIVIDGYAKYGCIEEALELFRVVIESGIT 535

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            P++ T++ L+   C++ ++ +A  +LD++K  GL P  V+Y+ L++ +   G  E   ++
Sbjct: 536  PNVSTFNSLIYGYCKTRKIAQARKILDDIKLYGLVPSVVSYTTLMNAYADCGNTESVDEL 595

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAK 1628
              EM +K I P  F +S I+ GLC  R + + +     +    +  + + YN MI    +
Sbjct: 596  RLEMKAKGITPTNFTYSVIMKGLCIGRKLKKYKQVRRDMASEGITPDQITYNTMIQSLCR 655

Query: 1629 HGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVT 1808
              D++ A  L+E++ +  L P   T+N LI G C    + +A   L  L    ++ S   
Sbjct: 656  VKDLSGAFELFEEMISQNLDPTPATYNILIDGLCFYGYIKKADRFLYWLQERDVSLSKFA 715

Query: 1809 YTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRF 1973
            YTTL+ A+C +G  ++   L  ++ ++    ++  Y+ VI  LC+ R+L+   +F
Sbjct: 716  YTTLIKAHCVKGVPEMAVMLFLQLLDRGFDVSIRDYSAVINRLCR-RQLENKAKF 769



 Score =  130 bits (326), Expect = 4e-27
 Identities = 96/453 (21%), Positives = 210/453 (46%), Gaps = 56/453 (12%)
 Frame = +3

Query: 366  NEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWN- 542
            N+HG     ++  ++       G +  +  +++QML +  S  A +   LL  + +  N 
Sbjct: 319  NQHGVEPDTVTYNILAKGFHLLGMITWVSEVIEQMLGKGLSPDAITYTILLCAHCQLGNI 378

Query: 543  --STSLVWDMLANVY---------------CKSEMVHDALFVLGKMKDLNFQASISTYNS 671
                 L+ +ML+  +               CK+  +++AL +  +MK    +  +  Y+ 
Sbjct: 379  EKGLRLLKEMLSRGFELNSIIPCSVMLSGLCKTGRINEALSLFYEMKANGLRPDLVAYSI 438

Query: 672  LMYNVRHT---DMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKE 842
            +++ +      DM   +++E+++ R+  N  T    + GLC++  L +A          +
Sbjct: 439  VIHGLCRLGEFDMAVWLFDEMRSKRILPNSRTLGAMLLGLCQKGMLLEARALLDSLISTD 498

Query: 843  FKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEAL 1022
                ++ ++ ++ G+   G ++ A   F ++++ G+ P+V ++N+LI+G C    + +A 
Sbjct: 499  CTLDIILYNIVIDGYAKYGCIEEALELFRVVIESGITPNVSTFNSLIYGYCKTRKIAQAR 558

Query: 1023 DFSDDMQRHGVEPDLVTYNILVNGFCLLG--------------------------LMSGA 1124
               DD++ +G+ P +V+Y  L+N +   G                          +M G 
Sbjct: 559  KILDDIKLYGLVPSVVSYTTLMNAYADCGNTESVDELRLEMKAKGITPTNFTYSVIMKGL 618

Query: 1125 --------WKAIQK-MLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSI 1277
                    +K +++ M  +G+ PDQ+TY  +I   C+  ++   F+L EEM++Q   P+ 
Sbjct: 619  CIGRKLKKYKQVRRDMASEGITPDQITYNTMIQSLCRVKDLSGAFELFEEMISQNLDPTP 678

Query: 1278 ITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYRE 1457
             TY+ L+  LC  G + +A   L  ++   +      Y+ LI   C +G  E A+ ++ +
Sbjct: 679  ATYNILIDGLCFYGYIKKADRFLYWLQERDVSLSKFAYTTLIKAHCVKGVPEMAVMLFLQ 738

Query: 1458 MLSKRIIPNPFAHSAILSGLCEKRMILEARAYF 1556
            +L +    +   +SA+++ LC +++  +A+ +F
Sbjct: 739  LLDRGFDVSIRDYSAVINRLCRRQLENKAKFFF 771



 Score =  112 bits (279), Expect = 1e-21
 Identities = 86/379 (22%), Positives = 163/379 (43%)
 Frame = +3

Query: 318  RGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASA 497
            R  + D A+  F+ +R++    +SR    ++   L  KG L E R +L  ++  +     
Sbjct: 445  RLGEFDMAVWLFDEMRSKRILPNSRTLGAMLLG-LCQKGMLLEARALLDSLISTD----- 498

Query: 498  PSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLM 677
               C L            ++++++ + Y K   + +AL +   + +     ++ST+NSL+
Sbjct: 499  ---CTL----------DIILYNIVIDGYAKYGCIEEALELFRVVIESGITPNVSTFNSLI 545

Query: 678  YNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCV 857
            Y                                G CK  K+  A +   + +     P V
Sbjct: 546  Y--------------------------------GYCKTRKIAQARKILDDIKLYGLVPSV 573

Query: 858  VSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDD 1037
            VS++TLM+ + + G  +        M   G+ P  ++Y+ ++ GLC+   +++      D
Sbjct: 574  VSYTTLMNAYADCGNTESVDELRLEMKAKGITPTNFTYSVIMKGLCIGRKLKKYKQVRRD 633

Query: 1038 MQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGN 1217
            M   G+ PD +TYN ++   C +  +SGA++  ++M+ Q L P   TY +LI G C  G 
Sbjct: 634  MASEGITPDQITYNTMIQSLCRVKDLSGAFELFEEMISQNLDPTPATYNILIDGLCFYGY 693

Query: 1218 IEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSI 1397
            I++  + L  +  +    S   Y+ L+   C  G    A+ L  ++   G D     YS 
Sbjct: 694  IKKADRFLYWLQERDVSLSKFAYTTLIKAHCVKGVPEMAVMLFLQLLDRGFDVSIRDYSA 753

Query: 1398 LIHGFCKQGKVERAIQIYR 1454
            +I+  C++    +A   +R
Sbjct: 754  VINRLCRRQLENKAKFFFR 772


>gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
            from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
            contains a PPR repeat domain PF|01535 [Arabidopsis
            thaliana]
          Length = 797

 Score =  746 bits (1927), Expect = 0.0
 Identities = 375/752 (49%), Positives = 520/752 (69%), Gaps = 15/752 (1%)
 Frame = +3

Query: 153  DESIDT--SISNPCDPIPEVLRGLKSFGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGS 326
            DES+ T  S S+      E+L G+K  G  +FL   HFR L+  L   HV+ I+D L   
Sbjct: 3    DESLPTTNSTSDHRGFYKEILFGMKKIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSE 62

Query: 327  DVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSL 506
              D ++ FF  LR+ + FRHS  S  +V H+LAG+ + KEL+ IL+Q+L+EEGS SA  L
Sbjct: 63   SSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGSGSASRL 122

Query: 507  CELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNV 686
            CELL N+F++W ST LVWDML  +  +  MV D+L++L KMKD N   S  +YNS++Y+ 
Sbjct: 123  CELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 182

Query: 687  RHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSF 866
            R TD +WD+Y EIK     +N HT +  +DGLC+Q KL+DAV F R +E K+  P VVSF
Sbjct: 183  RETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 238

Query: 867  STLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQR 1046
            +++MSG+C +GFVD+AKSFFC +LK G+ P VYS+N LI+GLC+ GS+ EAL+ + DM +
Sbjct: 239  NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 298

Query: 1047 HGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEE 1226
            HGVEPD VTYNIL  GF LLG++SGAW+ I+ ML +GL PD +TYT+L+CG CQ GNI+ 
Sbjct: 299  HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 358

Query: 1227 GFKLLEEMLAQGFQ-PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILI 1403
            G  LL++ML++GF+  SII  S +LS LC++GR++EAL L ++MKA GL PD V YSI+I
Sbjct: 359  GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 418

Query: 1404 HGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLV 1583
            HG CK GK + A+ +Y EM  KRI+PN   H A+L GLC+K M+LEAR+  ++L  S   
Sbjct: 419  HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 478

Query: 1584 VNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARAL 1763
            ++IVLYNI+IDGYAK G I EA+ L++ +   G+TP++ TFNSLIYG+CK + +AEAR +
Sbjct: 479  LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 538

Query: 1764 LQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLC- 1940
            L  + ++ LAPS V+YTTLM+AY   G    +  L  EM+ + + PT +TY+V+ KGLC 
Sbjct: 539  LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 598

Query: 1941 -----------KQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDR 2087
                       ++R  ++  + L DME++G+ PDQITYNT+IQ  C VK +  AF  L+ 
Sbjct: 599  GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 658

Query: 2088 MLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTIIKAYCAKGN 2267
            M   NL     TYN++I+ LC+ G ++ A   + +LQ +N+ L+K AYTT+IKA+C KG+
Sbjct: 659  MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 718

Query: 2268 PRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            P MA  LF+Q++  G+  SIRDYSA+INRLC+
Sbjct: 719  PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 750



 Score =  138 bits (347), Expect = 1e-29
 Identities = 92/387 (23%), Positives = 183/387 (47%), Gaps = 15/387 (3%)
 Frame = +3

Query: 582  CKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHT---DMIWDIYNEIKANRVPRNV 752
            CK+  + +AL +  +MK       +  Y+ +++ +      DM   +Y+E+   R+  N 
Sbjct: 387  CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNS 446

Query: 753  HTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCM 932
             T+   + GLC++  L +A               +V ++ ++ G+   G ++ A   F +
Sbjct: 447  RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 506

Query: 933  MLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGL 1112
            +++ G+ P V ++N+LI+G C   ++ EA    D ++ +G+ P +V+Y  L++ +   G 
Sbjct: 507  VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 566

Query: 1113 MSGAWKAIQKMLLQGLKPDQVTYTLLI-----------CGHCQRGNIEEGFKL-LEEMLA 1256
                 +  ++M  +G+ P  VTY+++            C H  R  I E  K  L +M +
Sbjct: 567  TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 626

Query: 1257 QGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVER 1436
            +G  P  ITY+ ++  LCR   ++ A   L+ MK+  LD    TY+ILI   C  G + +
Sbjct: 627  EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 686

Query: 1437 AIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMID 1616
            A      +  + +  + FA++ ++   C K     A   F  L      V+I  Y+ +I+
Sbjct: 687  ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 746

Query: 1617 GYAKHGDINEAIRLYEQIFNDGLTPNI 1697
               +   +NE+   +  + + G++P++
Sbjct: 747  RLCRRHLVNESKFFFCLMLSQGISPDL 773



 Score =  123 bits (308), Expect = 4e-25
 Identities = 79/375 (21%), Positives = 171/375 (45%), Gaps = 21/375 (5%)
 Frame = +3

Query: 552  LVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNE 722
            + + ++ +  CK      AL++  +M D     +  T+ +L+  +    M+ +   + + 
Sbjct: 412  VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 471

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGF 902
            + ++    ++    I IDG  K   +++A+  F+        P V +F++L+ G+C    
Sbjct: 472  LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 531

Query: 903  VDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNI 1082
            +  A+    ++  YG+ P V SY TL+      G+ +   +   +M+  G+ P  VTY++
Sbjct: 532  IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 591

Query: 1083 LVNGFCLLGLMSGAWK------------------AIQKMLLQGLKPDQVTYTLLICGHCQ 1208
            +  G C        WK                   ++ M  +G+ PDQ+TY  +I   C+
Sbjct: 592  IFKGLCR------GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 645

Query: 1209 RGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVT 1388
              ++   F  LE M ++    S  TY+ L+  LC  G + +A   +  ++   +      
Sbjct: 646  VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 705

Query: 1389 YSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLT 1568
            Y+ LI   C +G  E A++++ ++L +    +   +SA+++ LC + ++ E++ +F  + 
Sbjct: 706  YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLML 765

Query: 1569 KSDLVVNIVLYNIMI 1613
               +  ++ +  +MI
Sbjct: 766  SQGISPDLDICEVMI 780



 Score =  114 bits (284), Expect = 3e-22
 Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 17/337 (5%)
 Frame = +3

Query: 420  LAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMV 599
            L  KG L E R +L  ++     +S  +L  +L+N             ++ + Y KS  +
Sbjct: 456  LCQKGMLLEARSLLDSLI-----SSGETLDIVLYN-------------IVIDGYAKSGCI 497

Query: 600  HDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNEIKANRVPRNVHTNTIF 770
             +AL +   + +     S++T+NSL+Y    T  I +   I + IK   +  +V + T  
Sbjct: 498  EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 557

Query: 771  IDGL--CKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFC------NMGFV------D 908
            +D    C   K  D +R  RE + +   P  V++S +  G C      N   V      +
Sbjct: 558  MDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 615

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
              K     M   G+ PD  +YNT+I  LC    +  A  F + M+   ++    TYNIL+
Sbjct: 616  KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 675

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
            +  C+ G +  A   I  +  Q +   +  YT LI  HC +G+ E   KL  ++L +GF 
Sbjct: 676  DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 735

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPD 1379
             SI  YS +++ LCR   VNE+      M + G+ PD
Sbjct: 736  VSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772


>ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338605|gb|EFH69022.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  744 bits (1922), Expect = 0.0
 Identities = 379/761 (49%), Positives = 522/761 (68%), Gaps = 15/761 (1%)
 Frame = +3

Query: 126  PSFSATAAQDESIDTS--ISNPCDPIPEVLRGLKSFGTEKFLDSPHFRTLILYLNPSHVD 299
            P +   +  DES  T+   S+  D   E+L G+K  G  +FL   HFR L+  L   HV+
Sbjct: 5    PEYKIDSVSDESSPTTNFTSDHRDFYQEILFGMKKIGFREFLHGHHFRGLVSELRQIHVE 64

Query: 300  RILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEE 479
             I+  L     D ++ FF  LR+ +GFRHSR S  +V HI AG+ + KEL+ IL+Q+L+E
Sbjct: 65   DIMAELMSESSDLSVWFFKELRDIYGFRHSRFSTLLVSHIFAGQRRFKELQVILEQLLQE 124

Query: 480  EGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASIS 659
            EG      LCELL N+F++W ST LVWDML  +  +  MV ++L++L KMKD N   S  
Sbjct: 125  EGK-----LCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQ 179

Query: 660  TYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGK 839
            +YNS++YN R TD +WD+Y EIK     +N HT +  +DGLC+Q KL+DAV F R +E K
Sbjct: 180  SYNSVLYNFRETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWK 235

Query: 840  EFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEA 1019
            +  P VVSF+++MS +C +GFVD+AKSFFC +LK G+ P VYS+N LI+GLC+ GS+ EA
Sbjct: 236  DIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEA 295

Query: 1020 LDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICG 1199
            L+ + DM +HGVEPD VTYNILV GF LLG++SGA + IQ ML +GL PD +TYT+L+CG
Sbjct: 296  LELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCG 355

Query: 1200 HCQRGNIEEGFKLLEEMLAQGFQ-PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDP 1376
             CQ GNI+ G  LL++ML++GF+  SII YS +LS LC++GRV+EAL L  +++A GL P
Sbjct: 356  QCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTP 415

Query: 1377 DPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYF 1556
            D V YSI+IHG CK GK + A+++Y EM  KRI+PN     AI+ GLC+K M+LEAR+  
Sbjct: 416  DLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLL 475

Query: 1557 ETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKN 1736
            ++L  S   ++I+LYNI+IDGYAK G I EA+ L++     G+TPN+ TFNSLIYG+CK 
Sbjct: 476  DSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKT 535

Query: 1737 KKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITY 1916
            + +AEAR +L  + ++ L PS V+YTTLM+AY   G +  +  L  EM+ + + PT +TY
Sbjct: 536  QNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTY 595

Query: 1917 TVVIKGLCK-----------QRRLKESF-RFLGDMEAKGLTPDQITYNTLIQGFCEVKDM 2060
            +V+ KGLC+           + R+ E F   L DME++G+TPDQITYNT+IQ  C VK +
Sbjct: 596  SVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHL 655

Query: 2061 RAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTI 2240
              AF L  +M   NL P   TYN++I+ LC+ G ++ A   L +LQ +N+ L+K AYTT+
Sbjct: 656  SRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTV 715

Query: 2241 IKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            IKA+C KG+P MA ILFNQ+++ G+  SIRDYSA+INRLC+
Sbjct: 716  IKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCR 756



 Score =  193 bits (490), Expect = 3e-46
 Identities = 122/499 (24%), Positives = 238/499 (47%), Gaps = 16/499 (3%)
 Frame = +3

Query: 561  DMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI---WDIYNEIKA 731
            ++L N  C    + +AL +   M     +    TYN L+       MI    ++  ++  
Sbjct: 280  NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLD 339

Query: 732  NRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFK-PCVVSFSTLMSGFCNMGFVD 908
              +  +V T TI + G C+   +   +   ++   + F+   ++ +S ++SG C  G VD
Sbjct: 340  KGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVD 399

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A S F  +  YG+ PD+ +Y+ +IHGLC  G  + A+   D+M    + P+  T   ++
Sbjct: 400  EALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIM 459

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
             G C  G++  A   +  ++  G   D + Y ++I G+ + G IEE  +L +  +  G  
Sbjct: 460  LGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGIT 519

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            P++ T++ L+   C++  + EA  +LD +K  GL P  V+Y+ L+  +   G ++   ++
Sbjct: 520  PNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEEL 579

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCE------------KRMILEARAYFETLTKSDLVVNI 1592
             REM ++ I P    +S I  GLC             +R++ +       +    +  + 
Sbjct: 580  RREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQ 639

Query: 1593 VLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQT 1772
            + YN +I    +   ++ A  L++++ +  L P   T+N LI   C    + +A   L +
Sbjct: 640  ITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYS 699

Query: 1773 LNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRR 1952
            L    ++ S   YTT++ A+C +G  ++   L +++ ++    ++  Y+ VI  LC++  
Sbjct: 700  LQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHL 759

Query: 1953 LKESFRFLGDMEAKGLTPD 2009
              ES  F   M ++G++PD
Sbjct: 760  AIESKYFFCLMLSRGISPD 778



 Score =  134 bits (337), Expect = 2e-28
 Identities = 90/395 (22%), Positives = 188/395 (47%), Gaps = 15/395 (3%)
 Frame = +3

Query: 558  WDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHT---DMIWDIYNEIK 728
            + ++ +  CK+  V +AL +   ++       +  Y+ +++ +      DM   +Y+E+ 
Sbjct: 385  YSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMC 444

Query: 729  ANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD 908
              R+  N  T    + GLC++  L +A               ++ ++ ++ G+   G ++
Sbjct: 445  YKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIE 504

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A   F + ++ G+ P+V ++N+LI+G C   ++ EA    D ++ +G+ P +V+Y  L+
Sbjct: 505  EALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLM 564

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQ-----------RGNIEEGFK 1235
            + +   G +    +  ++M  +G+ P  VTY+++  G C+           R  I E F 
Sbjct: 565  DAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFN 624

Query: 1236 -LLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGF 1412
             +L +M ++G  P  ITY+ ++  LCR   ++ A  L  +MK+  LDP   TY+ILI   
Sbjct: 625  HVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684

Query: 1413 CKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNI 1592
            C  G + +A +    +  + +  + FA++ ++   C K     A   F  L      V+I
Sbjct: 685  CIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSI 744

Query: 1593 VLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNI 1697
              Y+ +I+   +     E+   +  + + G++P++
Sbjct: 745  RDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDL 779



 Score =  124 bits (312), Expect = 1e-25
 Identities = 69/295 (23%), Positives = 145/295 (49%), Gaps = 12/295 (4%)
 Frame = +3

Query: 765  IFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKY 944
            I IDG  K   +++A+  F+        P V +F++L+ G+C    +  A+    ++  Y
Sbjct: 492  IVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLY 551

Query: 945  GVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGA 1124
            G+ P V SY TL+      GS++   +   +M+  G+ P  VTY+++  G C    +   
Sbjct: 552  GLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENC 611

Query: 1125 WKAIQKMLLQ------------GLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
             + +++ +L+            G+ PDQ+TY  +I   C+  ++   F+L ++M +Q   
Sbjct: 612  NQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLD 671

Query: 1269 PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQI 1448
            P+  TY+ L+  LC  G + +A   L  ++   +      Y+ +I   C +G  E A+ +
Sbjct: 672  PTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVIL 731

Query: 1449 YREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMI 1613
            + ++L +    +   +SA+++ LC + + +E++ +F  +    +  ++ +  +MI
Sbjct: 732  FNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMI 786



 Score =  103 bits (257), Expect = 4e-19
 Identities = 81/335 (24%), Positives = 148/335 (44%), Gaps = 15/335 (4%)
 Frame = +3

Query: 420  LAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMV 599
            L  KG L E R +L  ++     +S  +L  +L+N             ++ + Y KS  +
Sbjct: 462  LCQKGMLLEARSLLDSLI-----SSGDTLDIILYN-------------IVIDGYAKSGCI 503

Query: 600  HDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNEIKANRVPRNVHTNTIF 770
             +AL +     +     +++T+NSL+Y    T  I +   I + IK   +  +V + T  
Sbjct: 504  EEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTL 563

Query: 771  IDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD---------VAKSF 923
            +D       ++      RE + +   P  V++S +  G C    ++         + + F
Sbjct: 564  MDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKF 623

Query: 924  FCM---MLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNG 1094
              +   M   G+ PD  +YNT+I  LC    +  A +    M+   ++P   TYNIL++ 
Sbjct: 624  NHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDS 683

Query: 1095 FCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPS 1274
             C+ G +  A + +  +  + +   +  YT +I  HC +G+ E    L  ++L +GF  S
Sbjct: 684  LCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVS 743

Query: 1275 IITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPD 1379
            I  YS +++ LCR     E+      M + G+ PD
Sbjct: 744  IRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778


>ref|XP_006306771.1| hypothetical protein CARUB_v10008310mg [Capsella rubella]
            gi|565498266|ref|XP_006306772.1| hypothetical protein
            CARUB_v10008310mg [Capsella rubella]
            gi|482575482|gb|EOA39669.1| hypothetical protein
            CARUB_v10008310mg [Capsella rubella]
            gi|482575483|gb|EOA39670.1| hypothetical protein
            CARUB_v10008310mg [Capsella rubella]
          Length = 835

 Score =  739 bits (1907), Expect = 0.0
 Identities = 376/776 (48%), Positives = 535/776 (68%), Gaps = 19/776 (2%)
 Frame = +3

Query: 93   LTHLTSLIISRPSFSATAAQDESIDTS--ISNPCDPIPEVLRGLKSFGTEKFLDSPHFRT 266
            L+  +SL+ ++ SFS     DE + TS   S+  D   E+L G+K  G  +FL   HFR 
Sbjct: 17   LSPFSSLLSTKSSFSVAKLDDEPLPTSNFTSDHRDLHQEILLGMKKNGFREFLHGNHFRV 76

Query: 267  LILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKE 446
            ++  L   HV+ I+  L     D ++ FF  LR+ +GFRHSR S  +V HI AG+ + KE
Sbjct: 77   MVSELRQVHVEEIMAELMAESSDLSVWFFKELRDIYGFRHSRFSTLLVSHIFAGQRRFKE 136

Query: 447  LRRILKQMLEE----EGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALF 614
            L+ IL+Q+L+E    +GS SA  LCE+L ++F++W+ST +VWDML  +  +S+MV D+L+
Sbjct: 137  LQVILEQLLQENEQLQGSGSASLLCEVLSSSFRKWDSTGVVWDMLLFIASRSKMVDDSLY 196

Query: 615  VLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQA 794
            +L KMKDLN + S  +YNS++Y+ R TD +WD+Y EI      +N HT +  +DGLC+Q 
Sbjct: 197  ILEKMKDLNLKVSTQSYNSVLYSFRETDKMWDVYKEIN----DKNEHTYSTVVDGLCRQQ 252

Query: 795  KLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYN 974
            KL+DAV F R +E K+  P VVSF+++MSG+C +GFVD+AKSF C +LK G+ P VYS+N
Sbjct: 253  KLEDAVSFLRNSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFICTILKCGLVPSVYSHN 312

Query: 975  TLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQ 1154
             LI+GLC+AGS+ EAL  + DM +HGVEPD VTY+IL  GF LLG++ G W+ IQ+ML +
Sbjct: 313  ILINGLCLAGSITEALALATDMNKHGVEPDSVTYHILAKGFHLLGMIGGVWEVIQEMLDK 372

Query: 1155 GLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ-PSIITYSELLSCLCRSGRVNE 1331
            GL PD +TYT+++CGHCQ GNI+ G +LL++ML++GF+  SII  S +LS LC++GR+NE
Sbjct: 373  GLSPDVITYTIVLCGHCQLGNIDMGLRLLKDMLSRGFEFHSIIPCSVMLSGLCKTGRINE 432

Query: 1332 ALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILS 1511
            AL L  +M+A GL  D V YSI+IHG C+ G+   A+ +Y EM +K I+PN     AIL 
Sbjct: 433  ALSLFYDMEANGLRADLVAYSIVIHGLCRLGEFNMAVWLYDEMCTK-ILPNSRTDGAILL 491

Query: 1512 GLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTP 1691
            GLC+K M+LEA+A  ++L  +   ++I+LYNI+IDGYAK G I EA++L+  +   G+ P
Sbjct: 492  GLCQKGMLLEAKALLDSLKSTSNTLDIILYNIVIDGYAKSGCIEEALKLFNVVIESGIPP 551

Query: 1692 NIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLL 1871
            ++ TFNSLIYG+CK   +AEAR +L  + ++ L PSAV+YTTLMNAY   G  + +  L 
Sbjct: 552  SVATFNSLIYGYCKIWNIAEARRILDVIKLYGLVPSAVSYTTLMNAYANCGDTESIDELC 611

Query: 1872 HEMEEKAVAPTVITYTVVIKGLC------------KQRRLKESFRFLGDMEAKGLTPDQI 2015
             EM+ K ++ T +TY V+IKGLC            + R+L +  + L DM+++G+TPDQI
Sbjct: 612  SEMKTKGISATNVTYAVIIKGLCSNWKLEKCNQLLRDRKLGKCNQVLRDMDSEGITPDQI 671

Query: 2016 TYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTAL 2195
            TYNT+IQ  C VK +  AF LL  M   +L P P TYN++I+ LC+ G +K A   L  L
Sbjct: 672  TYNTIIQYLCRVKHLSKAFELLKEMKSRHLDPTPATYNILIDSLCVNGYIKEADRFLYWL 731

Query: 2196 QNKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            Q +N+ L+K AYTT+IKA+C KG+P+MA  LF+Q+++ G++ SIRDYSA+INRLC+
Sbjct: 732  QEQNVSLSKFAYTTLIKAHCVKGDPKMAEKLFHQLLDSGFDVSIRDYSAVINRLCR 787



 Score =  186 bits (473), Expect = 3e-44
 Identities = 131/504 (25%), Positives = 232/504 (46%), Gaps = 21/504 (4%)
 Frame = +3

Query: 561  DMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMI---WDIYNEIKA 731
            ++L N  C +  + +AL +   M     +    TY+ L        MI   W++  E+  
Sbjct: 312  NILINGLCLAGSITEALALATDMNKHGVEPDSVTYHILAKGFHLLGMIGGVWEVIQEMLD 371

Query: 732  NRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFK-PCVVSFSTLMSGFCNMGFVD 908
              +  +V T TI + G C+   +   +R  ++   + F+   ++  S ++SG C  G ++
Sbjct: 372  KGLSPDVITYTIVLCGHCQLGNIDMGLRLLKDMLSRGFEFHSIIPCSVMLSGLCKTGRIN 431

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
             A S F  M   G+R D+ +Y+ +IHGLC  G    A+   D+M    + P+  T   ++
Sbjct: 432  EALSLFYDMEANGLRADLVAYSIVIHGLCRLGEFNMAVWLYDEMCTK-ILPNSRTDGAIL 490

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKP-----DQVTYTLLICGHCQRGNIEEGFKLLEEML 1253
             G C  G++  A     K LL  LK      D + Y ++I G+ + G IEE  KL   ++
Sbjct: 491  LGLCQKGMLLEA-----KALLDSLKSTSNTLDIILYNIVIDGYAKSGCIEEALKLFNVVI 545

Query: 1254 AQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVE 1433
              G  PS+ T++ L+   C+   + EA  +LD +K  GL P  V+Y+ L++ +   G  E
Sbjct: 546  ESGIPPSVATFNSLIYGYCKIWNIAEARRILDVIKLYGLVPSAVSYTTLMNAYANCGDTE 605

Query: 1434 RAIQIYREMLSKRIIPNPFAHSAILSGLCEK------------RMILEARAYFETLTKSD 1577
               ++  EM +K I      ++ I+ GLC              R + +       +    
Sbjct: 606  SIDELCSEMKTKGISATNVTYAVIIKGLCSNWKLEKCNQLLRDRKLGKCNQVLRDMDSEG 665

Query: 1578 LVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEAR 1757
            +  + + YN +I    +   +++A  L +++ +  L P   T+N LI   C N  + EA 
Sbjct: 666  ITPDQITYNTIIQYLCRVKHLSKAFELLKEMKSRHLDPTPATYNILIDSLCVNGYIKEAD 725

Query: 1758 ALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGL 1937
              L  L    ++ S   YTTL+ A+C +G   +   L H++ +     ++  Y+ VI  L
Sbjct: 726  RFLYWLQEQNVSLSKFAYTTLIKAHCVKGDPKMAEKLFHQLLDSGFDVSIRDYSAVINRL 785

Query: 1938 CKQRRLKESFRFLGDMEAKGLTPD 2009
            C++  + ES  F   M  +G++PD
Sbjct: 786  CRRHLVNESKFFFRLMLCRGISPD 809



 Score =  147 bits (370), Expect = 3e-32
 Identities = 107/478 (22%), Positives = 222/478 (46%), Gaps = 34/478 (7%)
 Frame = +3

Query: 366  NEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWN- 542
            N+HG     ++  ++       G +  +  ++++ML++  S    +   +L  + +  N 
Sbjct: 335  NKHGVEPDSVTYHILAKGFHLLGMIGGVWEVIQEMLDKGLSPDVITYTIVLCGHCQLGNI 394

Query: 543  --STSLVWDMLANVY---------------CKSEMVHDALFVLGKMKDLNFQASISTYNS 671
                 L+ DML+  +               CK+  +++AL +   M+    +A +  Y+ 
Sbjct: 395  DMGLRLLKDMLSRGFEFHSIIPCSVMLSGLCKTGRINEALSLFYDMEANGLRADLVAYSI 454

Query: 672  LMYNV----RHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGK 839
            +++ +         +W +Y+E+    +P N  T+   + GLC++  L +A       +  
Sbjct: 455  VIHGLCRLGEFNMAVW-LYDEMCTKILP-NSRTDGAILLGLCQKGMLLEAKALLDSLKST 512

Query: 840  EFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEA 1019
                 ++ ++ ++ G+   G ++ A   F ++++ G+ P V ++N+LI+G C   ++ EA
Sbjct: 513  SNTLDIILYNIVIDGYAKSGCIEEALKLFNVVIESGIPPSVATFNSLIYGYCKIWNIAEA 572

Query: 1020 LDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICG 1199
                D ++ +G+ P  V+Y  L+N +   G      +   +M  +G+    VTY ++I G
Sbjct: 573  RRILDVIKLYGLVPSAVSYTTLMNAYANCGDTESIDELCSEMKTKGISATNVTYAVIIKG 632

Query: 1200 HCQRGNIEEGFKLLEE------------MLAQGFQPSIITYSELLSCLCRSGRVNEALGL 1343
             C    +E+  +LL +            M ++G  P  ITY+ ++  LCR   +++A  L
Sbjct: 633  LCSNWKLEKCNQLLRDRKLGKCNQVLRDMDSEGITPDQITYNTIIQYLCRVKHLSKAFEL 692

Query: 1344 LDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCE 1523
            L EMK+  LDP P TY+ILI   C  G ++ A +    +  + +  + FA++ ++   C 
Sbjct: 693  LKEMKSRHLDPTPATYNILIDSLCVNGYIKEADRFLYWLQEQNVSLSKFAYTTLIKAHCV 752

Query: 1524 KRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNI 1697
            K     A   F  L  S   V+I  Y+ +I+   +   +NE+   +  +   G++P++
Sbjct: 753  KGDPKMAEKLFHQLLDSGFDVSIRDYSAVINRLCRRHLVNESKFFFRLMLCRGISPDL 810



 Score =  120 bits (302), Expect = 2e-24
 Identities = 95/441 (21%), Positives = 198/441 (44%), Gaps = 42/441 (9%)
 Frame = +3

Query: 417  ILAGKGQLKELR---RILKQMLEEEGSASAPSLCELLWNNFKEWN----STSLVWDMLAN 575
            +L G  QL  +    R+LK ML       +   C ++ +   +      + SL +DM AN
Sbjct: 384  VLCGHCQLGNIDMGLRLLKDMLSRGFEFHSIIPCSVMLSGLCKTGRINEALSLFYDMEAN 443

Query: 576  VYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNV---RHTD-----------MIWD- 710
               ++++V  ++ + G  +   F  ++  Y+ +   +     TD           M+ + 
Sbjct: 444  GL-RADLVAYSIVIHGLCRLGEFNMAVWLYDEMCTKILPNSRTDGAILLGLCQKGMLLEA 502

Query: 711  --IYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSG 884
              + + +K+     ++    I IDG  K   +++A++ F         P V +F++L+ G
Sbjct: 503  KALLDSLKSTSNTLDIILYNIVIDGYAKSGCIEEALKLFNVVIESGIPPSVATFNSLIYG 562

Query: 885  FCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPD 1064
            +C +  +  A+    ++  YG+ P   SY TL++     G  E   +   +M+  G+   
Sbjct: 563  YCKIWNIAEARRILDVIKLYGLVPSAVSYTTLMNAYANCGDTESIDELCSEMKTKGISAT 622

Query: 1065 LVTYNILVNGFCLLGLMSGAWK------------------AIQKMLLQGLKPDQVTYTLL 1190
             VTY +++ G C        WK                   ++ M  +G+ PDQ+TY  +
Sbjct: 623  NVTYAVIIKGLC------SNWKLEKCNQLLRDRKLGKCNQVLRDMDSEGITPDQITYNTI 676

Query: 1191 ICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGL 1370
            I   C+  ++ + F+LL+EM ++   P+  TY+ L+  LC +G + EA   L  ++   +
Sbjct: 677  IQYLCRVKHLSKAFELLKEMKSRHLDPTPATYNILIDSLCVNGYIKEADRFLYWLQEQNV 736

Query: 1371 DPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARA 1550
                  Y+ LI   C +G  + A +++ ++L      +   +SA+++ LC + ++ E++ 
Sbjct: 737  SLSKFAYTTLIKAHCVKGDPKMAEKLFHQLLDSGFDVSIRDYSAVINRLCRRHLVNESKF 796

Query: 1551 YFETLTKSDLVVNIVLYNIMI 1613
            +F  +    +  ++ +  +MI
Sbjct: 797  FFRLMLCRGISPDLDICEMMI 817


>ref|XP_006348639.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g13630-like [Solanum tuberosum]
          Length = 834

 Score =  730 bits (1884), Expect = 0.0
 Identities = 376/715 (52%), Positives = 495/715 (69%), Gaps = 3/715 (0%)
 Frame = +3

Query: 228  GTEKFL-DSPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQF 404
            G+ K L   P F+ LI  LN S ++ I++ L   + +SAL FF LLRN++GF HSR S  
Sbjct: 64   GSAKLLRGDPCFKILIFELNSSEIEDIVEKLSFENSESALEFFFLLRNDYGFNHSRASHI 123

Query: 405  VVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYC 584
             V H+LA K + + L+  L+ ++++EG  SA S+CELL   F++W+S  +VWD+L + Y 
Sbjct: 124  AVAHVLAKKQRFRALKIHLQHLVQQEGFGSAHSICELLLICFQKWDSNHVVWDVLVSAYS 183

Query: 585  KSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNT 764
              +MV DALFV  KMKD + QAS+ TYN+L+YN+RHTD IWD+Y ++ A+ +  + +TN+
Sbjct: 184  HCQMVDDALFVFAKMKDFDIQASVFTYNNLLYNLRHTDYIWDVYYDMIASGINPSEYTNS 243

Query: 765  IFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKY 944
            I IDGLCKQ  +Q AV F R TE +EF+PCVVSF+ LMS  C MG VDVAKSFFCMM K 
Sbjct: 244  ILIDGLCKQFLIQKAVNFVRGTECREFEPCVVSFNALMSSSCKMGSVDVAKSFFCMMFKC 303

Query: 945  GVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGA 1124
            G  P+VYSYN LIHGL VAG+MEEAL+F DDM++HG+EPDL TYN+L  GF LLG+M+G 
Sbjct: 304  GFYPNVYSYNILIHGLSVAGAMEEALEFIDDMKKHGLEPDLETYNVLAKGFHLLGMMNGV 363

Query: 1125 WKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEE-GFKLLEEMLA-QGFQPSIITYSELL 1298
             K I +ML +G+ PD  TYT+L CG+C+ GNI+E   KL EEM + +G   S I+ + LL
Sbjct: 364  RKFINEMLRKGMNPDIFTYTMLNCGYCKEGNIDEKSIKLREEMFSKEGVHASAISNNMLL 423

Query: 1299 SCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRII 1478
            S LC+SG ++EAL L  E+++ G   D + YSILI G CKQG V+ A Q+Y++M  KRII
Sbjct: 424  SSLCKSGHLDEALNLFHEIESSGRKLDHIMYSILIQGLCKQGLVDMAFQLYKDMCCKRII 483

Query: 1479 PNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRL 1658
            PN  AH +IL   CEK  I EAR  F+ L   +L+ +I L NIMIDGYAK GDI E +++
Sbjct: 484  PNIVAHRSILKSFCEKGYIYEARVLFDALIDCNLIDDIFLVNIMIDGYAKLGDIGEVVQV 543

Query: 1659 YEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCR 1838
            YE I   G+TP+I TFNSLIYGFCK +KL +AR  + T+  H L PSA TYTTLMNAY  
Sbjct: 544  YELITGKGITPSIATFNSLIYGFCKARKLDDARKWVDTICAHGLIPSARTYTTLMNAYGE 603

Query: 1839 EGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQIT 2018
            EGKM  VF LL EM+ + + PT +TYTV++K LCK+R++ ES + L  M       D++ 
Sbjct: 604  EGKMQTVFELLDEMKARCIEPTHVTYTVIMKCLCKRRQIHESVQILKTMLPDDFQRDEVF 663

Query: 2019 YNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQ 2198
            YNT+I+  CE  DM  A  L   M +  LQP  VTYN+++NG C  G+LK A  L + LQ
Sbjct: 664  YNTIIKSLCEAHDMEGACKLYKEMAVHELQPSRVTYNILLNGYCTHGELKDAEELFSKLQ 723

Query: 2199 NKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
              ++ L K  YT +IKA+CAKG+   A +LF +M+E G+E SIRDYSA+INRLCK
Sbjct: 724  --DVGLMKCDYTILIKAHCAKGSVHKAVVLFQKMIEKGFEISIRDYSAVINRLCK 776



 Score =  182 bits (461), Expect = 8e-43
 Identities = 135/525 (25%), Positives = 245/525 (46%), Gaps = 14/525 (2%)
 Frame = +3

Query: 573  NVYCKSEMVH---------DALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDI---Y 716
            NVY  + ++H         +AL  +  MK    +  + TYN L        M+  +    
Sbjct: 308  NVYSYNILIHGLSVAGAMEEALEFIDDMKKHGLEPDLETYNVLAKGFHLLGMMNGVRKFI 367

Query: 717  NEIKANRVPRNVHTNTIFIDGLCKQAKLQD-AVRFFRETEGKE-FKPCVVSFSTLMSGFC 890
            NE+    +  ++ T T+   G CK+  + + +++   E   KE      +S + L+S  C
Sbjct: 368  NEMLRKGMNPDIFTYTMLNCGYCKEGNIDEKSIKLREEMFSKEGVHASAISNNMLLSSLC 427

Query: 891  NMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLV 1070
              G +D A + F  +   G + D   Y+ LI GLC  G ++ A     DM    + P++V
Sbjct: 428  KSGHLDEALNLFHEIESSGRKLDHIMYSILIQGLCKQGLVDMAFQLYKDMCCKRIIPNIV 487

Query: 1071 TYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEM 1250
             +  ++  FC  G +  A      ++   L  D     ++I G+ + G+I E  ++ E +
Sbjct: 488  AHRSILKSFCEKGYIYEARVLFDALIDCNLIDDIFLVNIMIDGYAKLGDIGEVVQVYELI 547

Query: 1251 LAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKV 1430
              +G  PSI T++ L+   C++ ++++A   +D + A GL P   TY+ L++ + ++GK+
Sbjct: 548  TGKGITPSIATFNSLIYGFCKARKLDDARKWVDTICAHGLIPSARTYTTLMNAYGEEGKM 607

Query: 1431 ERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIM 1610
            +   ++  EM ++ I P    ++ I+  LC++R I E+    +T+   D   + V YN +
Sbjct: 608  QTVFELLDEMKARCIEPTHVTYTVIMKCLCKRRQIHESVQILKTMLPDDFQRDEVFYNTI 667

Query: 1611 IDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRL 1790
            I    +  D+  A +LY+++    L P+  T+N L+ G+C + +L +A  L   L    L
Sbjct: 668  IKSLCEAHDMEGACKLYKEMAVHELQPSRVTYNILLNGYCTHGELKDAEELFSKLQDVGL 727

Query: 1791 APSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFR 1970
                  YT L+ A+C +G +     L  +M EK    ++  Y+ VI  LCK+  L     
Sbjct: 728  MKC--DYTILIKAHCAKGSVHKAVVLFQKMIEKGFEISIRDYSAVINRLCKRNLLAGVDI 785

Query: 1971 FLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNL 2105
            FL  M   G++ D      ++  F   +D  + F L   M+   L
Sbjct: 786  FLRMMLFHGISVDSQICFVMLNSF---RDHNSVFQLASLMIKCGL 827


>ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
            gi|332190929|gb|AEE29050.1| PPR repeat-containing protein
            [Arabidopsis thaliana]
          Length = 798

 Score =  722 bits (1864), Expect = 0.0
 Identities = 366/752 (48%), Positives = 511/752 (67%), Gaps = 15/752 (1%)
 Frame = +3

Query: 153  DESIDT--SISNPCDPIPEVLRGLKSFGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGS 326
            DES+ T  S S+      E+L G+K  G  +FL   HFR L+  L   HV+ I+D L   
Sbjct: 3    DESLPTTNSTSDHRGFYKEILFGMKKIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSE 62

Query: 327  DVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSL 506
              D ++ FF  LR+ + FRHS  S  +V H+LAG+ + KEL+ IL+Q+L+EEG+      
Sbjct: 63   SSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT------ 116

Query: 507  CELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNV 686
                   F++W ST LVWDML  +  +  MV D+L++L KMKD N   S  +YNS++Y+ 
Sbjct: 117  -------FRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169

Query: 687  RHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSF 866
            R TD +WD+Y EIK     +N HT +  +DGLC+Q KL+DAV F R +E K+  P VVSF
Sbjct: 170  RETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225

Query: 867  STLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQR 1046
            +++MSG+C +GFVD+AKSFFC +LK G+ P VYS+N LI+GLC+ GS+ EAL+ + DM +
Sbjct: 226  NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285

Query: 1047 HGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEE 1226
            HGVEPD VTYNIL  GF LLG++SGAW+ I+ ML +GL PD +TYT+L+CG CQ GNI+ 
Sbjct: 286  HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345

Query: 1227 GFKLLEEMLAQGFQ-PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILI 1403
            G  LL++ML++GF+  SII  S +LS LC++GR++EAL L ++MKA GL PD V YSI+I
Sbjct: 346  GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405

Query: 1404 HGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLV 1583
            HG CK GK + A+ +Y EM  KRI+PN   H A+L GLC+K M+LEAR+  ++L  S   
Sbjct: 406  HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465

Query: 1584 VNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARAL 1763
            ++IVLYNI+IDGYAK G I EA+ L++ +   G+TP++ TFNSLIYG+CK + +AEAR +
Sbjct: 466  LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525

Query: 1764 LQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLC- 1940
            L  + ++ LAPS V+YTTLM+AY   G    +  L  EM+ + + PT +TY+V+ KGLC 
Sbjct: 526  LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585

Query: 1941 -----------KQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDR 2087
                       ++R  ++  + L DME++G+ PDQITYNT+IQ  C VK +  AF  L+ 
Sbjct: 586  GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645

Query: 2088 MLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTIIKAYCAKGN 2267
            M   NL     TYN++I+ LC+ G ++ A   + +LQ +N+ L+K AYTT+IKA+C KG+
Sbjct: 646  MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705

Query: 2268 PRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            P MA  LF+Q++  G+  SIRDYSA+INRLC+
Sbjct: 706  PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score =  115 bits (289), Expect = 7e-23
 Identities = 75/349 (21%), Positives = 158/349 (45%), Gaps = 21/349 (6%)
 Frame = +3

Query: 552  LVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNE 722
            + + ++ +  CK      AL++  +M D     +  T+ +L+  +    M+ +   + + 
Sbjct: 399  VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGF 902
            + ++    ++    I IDG  K   +++A+  F+        P V +F++L+ G+C    
Sbjct: 459  LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518

Query: 903  VDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNI 1082
            +  A+    ++  YG+ P V SY TL+      G+ +   +   +M+  G+ P  VTY++
Sbjct: 519  IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578

Query: 1083 LVNGFCLLGLMSGAWK------------------AIQKMLLQGLKPDQVTYTLLICGHCQ 1208
            +  G C        WK                   ++ M  +G+ PDQ+TY  +I   C+
Sbjct: 579  IFKGLCR------GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632

Query: 1209 RGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVT 1388
              ++   F  LE M ++    S  TY+ L+  LC  G + +A   +  ++   +      
Sbjct: 633  VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692

Query: 1389 YSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMI 1535
            Y+ LI   C +G  E A++++ ++L +    +   +SA+++ LC + ++
Sbjct: 693  YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741



 Score =  106 bits (264), Expect = 6e-20
 Identities = 88/320 (27%), Positives = 144/320 (45%), Gaps = 17/320 (5%)
 Frame = +3

Query: 420  LAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMV 599
            L  KG L E R +L  ++     +S  +L  +L+N             ++ + Y KS  +
Sbjct: 443  LCQKGMLLEARSLLDSLI-----SSGETLDIVLYN-------------IVIDGYAKSGCI 484

Query: 600  HDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNEIKANRVPRNVHTNTIF 770
             +AL +   + +     S++T+NSL+Y    T  I +   I + IK   +  +V + T  
Sbjct: 485  EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544

Query: 771  IDGL--CKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFC------NMGFV------D 908
            +D    C   K  D +R  RE + +   P  V++S +  G C      N   V      +
Sbjct: 545  MDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
              K     M   G+ PD  +YNT+I  LC    +  A  F + M+   ++    TYNIL+
Sbjct: 603  KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
            +  C+ G +  A   I  +  Q +   +  YT LI  HC +G+ E   KL  ++L +GF 
Sbjct: 663  DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722

Query: 1269 PSIITYSELLSCLCRSGRVN 1328
             SI  YS +++ LCR   +N
Sbjct: 723  VSIRDYSAVINRLCRRHLMN 742


>ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
            gi|332190928|gb|AEE29049.1| PPR repeat-containing protein
            [Arabidopsis thaliana]
          Length = 806

 Score =  722 bits (1864), Expect = 0.0
 Identities = 366/752 (48%), Positives = 511/752 (67%), Gaps = 15/752 (1%)
 Frame = +3

Query: 153  DESIDT--SISNPCDPIPEVLRGLKSFGTEKFLDSPHFRTLILYLNPSHVDRILDFLRGS 326
            DES+ T  S S+      E+L G+K  G  +FL   HFR L+  L   HV+ I+D L   
Sbjct: 3    DESLPTTNSTSDHRGFYKEILFGMKKIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSE 62

Query: 327  DVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSL 506
              D ++ FF  LR+ + FRHS  S  +V H+LAG+ + KEL+ IL+Q+L+EEG+      
Sbjct: 63   SSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT------ 116

Query: 507  CELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNV 686
                   F++W ST LVWDML  +  +  MV D+L++L KMKD N   S  +YNS++Y+ 
Sbjct: 117  -------FRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169

Query: 687  RHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSF 866
            R TD +WD+Y EIK     +N HT +  +DGLC+Q KL+DAV F R +E K+  P VVSF
Sbjct: 170  RETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225

Query: 867  STLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQR 1046
            +++MSG+C +GFVD+AKSFFC +LK G+ P VYS+N LI+GLC+ GS+ EAL+ + DM +
Sbjct: 226  NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285

Query: 1047 HGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEE 1226
            HGVEPD VTYNIL  GF LLG++SGAW+ I+ ML +GL PD +TYT+L+CG CQ GNI+ 
Sbjct: 286  HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345

Query: 1227 GFKLLEEMLAQGFQ-PSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILI 1403
            G  LL++ML++GF+  SII  S +LS LC++GR++EAL L ++MKA GL PD V YSI+I
Sbjct: 346  GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405

Query: 1404 HGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLV 1583
            HG CK GK + A+ +Y EM  KRI+PN   H A+L GLC+K M+LEAR+  ++L  S   
Sbjct: 406  HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465

Query: 1584 VNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARAL 1763
            ++IVLYNI+IDGYAK G I EA+ L++ +   G+TP++ TFNSLIYG+CK + +AEAR +
Sbjct: 466  LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525

Query: 1764 LQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLC- 1940
            L  + ++ LAPS V+YTTLM+AY   G    +  L  EM+ + + PT +TY+V+ KGLC 
Sbjct: 526  LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585

Query: 1941 -----------KQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDR 2087
                       ++R  ++  + L DME++G+ PDQITYNT+IQ  C VK +  AF  L+ 
Sbjct: 586  GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645

Query: 2088 MLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIAYTTIIKAYCAKGN 2267
            M   NL     TYN++I+ LC+ G ++ A   + +LQ +N+ L+K AYTT+IKA+C KG+
Sbjct: 646  MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705

Query: 2268 PRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            P MA  LF+Q++  G+  SIRDYSA+INRLC+
Sbjct: 706  PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737



 Score =  115 bits (289), Expect = 7e-23
 Identities = 75/349 (21%), Positives = 158/349 (45%), Gaps = 21/349 (6%)
 Frame = +3

Query: 552  LVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNE 722
            + + ++ +  CK      AL++  +M D     +  T+ +L+  +    M+ +   + + 
Sbjct: 399  VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGF 902
            + ++    ++    I IDG  K   +++A+  F+        P V +F++L+ G+C    
Sbjct: 459  LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518

Query: 903  VDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNI 1082
            +  A+    ++  YG+ P V SY TL+      G+ +   +   +M+  G+ P  VTY++
Sbjct: 519  IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578

Query: 1083 LVNGFCLLGLMSGAWK------------------AIQKMLLQGLKPDQVTYTLLICGHCQ 1208
            +  G C        WK                   ++ M  +G+ PDQ+TY  +I   C+
Sbjct: 579  IFKGLCR------GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632

Query: 1209 RGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVT 1388
              ++   F  LE M ++    S  TY+ L+  LC  G + +A   +  ++   +      
Sbjct: 633  VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692

Query: 1389 YSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMI 1535
            Y+ LI   C +G  E A++++ ++L +    +   +SA+++ LC + ++
Sbjct: 693  YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLM 741



 Score =  106 bits (264), Expect = 6e-20
 Identities = 88/320 (27%), Positives = 144/320 (45%), Gaps = 17/320 (5%)
 Frame = +3

Query: 420  LAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMV 599
            L  KG L E R +L  ++     +S  +L  +L+N             ++ + Y KS  +
Sbjct: 443  LCQKGMLLEARSLLDSLI-----SSGETLDIVLYN-------------IVIDGYAKSGCI 484

Query: 600  HDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWD---IYNEIKANRVPRNVHTNTIF 770
             +AL +   + +     S++T+NSL+Y    T  I +   I + IK   +  +V + T  
Sbjct: 485  EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544

Query: 771  IDGL--CKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFC------NMGFV------D 908
            +D    C   K  D +R  RE + +   P  V++S +  G C      N   V      +
Sbjct: 545  MDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILV 1088
              K     M   G+ PD  +YNT+I  LC    +  A  F + M+   ++    TYNIL+
Sbjct: 603  KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662

Query: 1089 NGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQ 1268
            +  C+ G +  A   I  +  Q +   +  YT LI  HC +G+ E   KL  ++L +GF 
Sbjct: 663  DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722

Query: 1269 PSIITYSELLSCLCRSGRVN 1328
             SI  YS +++ LCR   +N
Sbjct: 723  VSIRDYSAVINRLCRRHLMN 742


>ref|XP_006846807.1| hypothetical protein AMTR_s00148p00070910 [Amborella trichopoda]
            gi|548849629|gb|ERN08388.1| hypothetical protein
            AMTR_s00148p00070910 [Amborella trichopoda]
          Length = 793

 Score =  707 bits (1826), Expect = 0.0
 Identities = 346/662 (52%), Positives = 474/662 (71%)
 Frame = +3

Query: 378  FRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLV 557
            FRHSR++QF V H LA + +LK+LR +++++L +EG  SAP LCELL   F++W+S  LV
Sbjct: 71   FRHSRVTQFAVAHALAMQKRLKDLRVVIQRILAKEGPGSAPILCELLSEQFQDWDSNDLV 130

Query: 558  WDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANR 737
            WDMLANV+ KS+++ D+L+VL KMK L  QASISTYNSL+   RHT+M W I  ++  + 
Sbjct: 131  WDMLANVFSKSQLIDDSLYVLTKMKFLKLQASISTYNSLLSKTRHTEMFWSICEDLCVSG 190

Query: 738  VPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAK 917
            V  N++T  I I GLCK+ +L++AV+ F+E +     P +V+F+ LMSGFC MGFV +AK
Sbjct: 191  VSLNIYTYNILIHGLCKRQRLREAVKMFQEMQSVGHLPNIVTFNILMSGFCEMGFVKIAK 250

Query: 918  SFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGF 1097
            SF  +ML +G+  D YSYNTLIHGLCV GS+EEAL+FS+DM++H +E DL+TYN LVNGF
Sbjct: 251  SFLSLMLGHGLLLDTYSYNTLIHGLCVVGSIEEALEFSEDMEKHNIELDLITYNALVNGF 310

Query: 1098 CLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSI 1277
            CLLGLMS A K + +MLL GL+P+ VTYT L+ GH ++GN+ EG ++ +EM+A+  Q ++
Sbjct: 311  CLLGLMSEADKVVCRMLLNGLRPNHVTYTTLMSGHLRKGNVNEGMRIRDEMIARDLQLNM 370

Query: 1278 ITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYRE 1457
             TY+ LLS LC+ GRVNEA  L+DEM  +GL PD + Y ILI G+ K G  ERA ++++ 
Sbjct: 371  YTYAVLLSALCKMGRVNEAEKLVDEMVVVGLVPDLIIYCILIGGYAKIGNTERANKLFQV 430

Query: 1458 MLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGD 1637
            ML + I PN  A  A+LS +C+   + EARAY + LT S LV++  LYNIMIDGY K G 
Sbjct: 431  MLREGIKPNKVACMAMLSSMCKNGELGEARAYLDYLTNSGLVIDKFLYNIMIDGYVKMGY 490

Query: 1638 INEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTT 1817
            I EA  LYE++  +G++P+I T NSLIYG CKN +L EA+ ++  L +H L P+ VTY+T
Sbjct: 491  IQEAFGLYEEMIKNGVSPSIVTHNSLIYGLCKNGRLTEAKGMVGMLKLHGLVPNEVTYST 550

Query: 1818 LMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKG 1997
            +++AYC EG M++V  LL+EM  K +AP  +TY+++IKGLCKQ  L+ +   L +M +KG
Sbjct: 551  IIDAYCEEGSMEIVMELLNEMASKGIAPNTVTYSIIIKGLCKQGLLQRALGVLNEMYSKG 610

Query: 1998 LTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAF 2177
            L  D ITYNTLIQGFCE  +M +AF L D M+  NL+P P TY ++++GLCMC DL  A 
Sbjct: 611  LEADHITYNTLIQGFCEQHNMFSAFSLHDEMMERNLEPTPTTYYLLVSGLCMCYDLWSAE 670

Query: 2178 GLLTALQNKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRL 2357
              L  +  + IKL K AYT+++ AYC +G+      LFN+MV+ G+E SI D+SA INR 
Sbjct: 671  KFLETITLRGIKLNKDAYTSVVNAYCVRGDKYKVIDLFNRMVKRGFELSISDFSAAINRF 730

Query: 2358 CK 2363
            CK
Sbjct: 731  CK 732



 Score =  156 bits (395), Expect = 4e-35
 Identities = 80/307 (26%), Positives = 162/307 (52%)
 Frame = +3

Query: 765  IFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKY 944
            I IDG  K   +Q+A   + E       P +V+ ++L+ G C  G +  AK    M+  +
Sbjct: 480  IMIDGYVKMGYIQEAFGLYEEMIKNGVSPSIVTHNSLIYGLCKNGRLTEAKGMVGMLKLH 539

Query: 945  GVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGA 1124
            G+ P+  +Y+T+I   C  GSME  ++  ++M   G+ P+ VTY+I++ G C  GL+  A
Sbjct: 540  GLVPNEVTYSTIIDAYCEEGSMEIVMELLNEMASKGIAPNTVTYSIIIKGLCKQGLLQRA 599

Query: 1125 WKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSC 1304
               + +M  +GL+ D +TY  LI G C++ N+   F L +EM+ +  +P+  TY  L+S 
Sbjct: 600  LGVLNEMYSKGLEADHITYNTLIQGFCEQHNMFSAFSLHDEMMERNLEPTPTTYYLLVSG 659

Query: 1305 LCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPN 1484
            LC    +  A   L+ +   G+  +   Y+ +++ +C +G   + I ++  M+ +    +
Sbjct: 660  LCMCYDLWSAEKFLETITLRGIKLNKDAYTSVVNAYCVRGDKYKVIDLFNRMVKRGFELS 719

Query: 1485 PFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYE 1664
                SA ++  C++R ++EA+  F  + +  +  +  +Y ++++ + + G ++   +L+ 
Sbjct: 720  ISDFSAAINRFCKRRRLIEAKDMFNMMLQVGVSPDREIYAVLLEAFQREGYVSPVSQLHA 779

Query: 1665 QIFNDGL 1685
            ++   G+
Sbjct: 780  KMIRSGM 786



 Score = 99.0 bits (245), Expect = 9e-18
 Identities = 68/297 (22%), Positives = 134/297 (45%), Gaps = 3/297 (1%)
 Frame = +3

Query: 582  CKSEMVHDALFVLGKMKDLNFQASISTYNSLM---YNVRHTDMIWDIYNEIKANRVPRNV 752
            CK+  + +A  ++G +K      +  TY++++         +++ ++ NE+ +  +  N 
Sbjct: 521  CKNGRLTEAKGMVGMLKLHGLVPNEVTYSTIIDAYCEEGSMEIVMELLNEMASKGIAPNT 580

Query: 753  HTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCM 932
             T +I I GLCKQ  LQ A+    E   K  +   ++++TL+ GFC    +  A S    
Sbjct: 581  VTYSIIIKGLCKQGLLQRALGVLNEMYSKGLEADHITYNTLIQGFCEQHNMFSAFSLHDE 640

Query: 933  MLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGL 1112
            M++  + P   +Y  L+ GLC+   +  A  F + +   G++ +   Y  +VN +C+   
Sbjct: 641  MMERNLEPTPTTYYLLVSGLCMCYDLWSAEKFLETITLRGIKLNKDAYTSVVNAYCV--- 697

Query: 1113 MSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSE 1292
                                            RG+  +   L   M+ +GF+ SI  +S 
Sbjct: 698  --------------------------------RGDKYKVIDLFNRMVKRGFELSISDFSA 725

Query: 1293 LLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREML 1463
             ++  C+  R+ EA  + + M  +G+ PD   Y++L+  F ++G V    Q++ +M+
Sbjct: 726  AINRFCKRRRLIEAKDMFNMMLQVGVSPDREIYAVLLEAFQREGYVSPVSQLHAKMI 782


>gb|EYU22585.1| hypothetical protein MIMGU_mgv1a026418mg, partial [Mimulus guttatus]
          Length = 745

 Score =  684 bits (1765), Expect = 0.0
 Identities = 367/766 (47%), Positives = 495/766 (64%), Gaps = 12/766 (1%)
 Frame = +3

Query: 102  LTSLIISRP----SFSATAA-------QDESIDTSISNPCDPIPEVLRGLKSFGTEKFLD 248
            LT L  + P    SFSA AA       Q++S+   + +   P    LR            
Sbjct: 12   LTPLFSTNPQTLSSFSAAAAAAATNFPQNDSVSRILGHFNSP---PLRHSTKLLFNYLQH 68

Query: 249  SPHFRTLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAG 428
            +  F+  +L L PS +D I++ L     ++A+ FF +L+N  GF+HSR SQFVV H LA 
Sbjct: 69   NASFKYEVLELGPSEIDAIIEKLSS---ENAIEFFFVLQNVFGFKHSRNSQFVVAHCLAE 125

Query: 429  KGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWNSTSLVWDMLANVYCKSEMVHDA 608
            K + + L+  L+++L EE S                             +  K +MVHDA
Sbjct: 126  KKRSRALQCHLQRVLREEASVDG--------------------------IRIKCDMVHDA 159

Query: 609  LFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFIDGLCK 788
            LF L KMK+   + SI TYNSL++N+R  D + D Y+ I+A       +TN+IF+DGLC+
Sbjct: 160  LFALEKMKESRVRPSIMTYNSLLHNLRQRDTMQDFYDSIEAKGFFPTNYTNSIFLDGLCR 219

Query: 789  QAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVRPDVYS 968
            Q+   +AV F R+ + K  +PC+V F+TLMSGFC +G VD+AKSFFC M KYG+ PDVYS
Sbjct: 220  QSLFHEAVAFLRQLQEKHAEPCLVWFNTLMSGFCRLGSVDIAKSFFCKMFKYGLVPDVYS 279

Query: 969  YNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKAIQKML 1148
            YN LIHGLC+ G  EEALDF+ DM++HG+EPD VTYNI   GF  LG+M    +  +KML
Sbjct: 280  YNILIHGLCITGLPEEALDFTKDMEKHGLEPDQVTYNIFSKGFRQLGMMGEFGEFTKKML 339

Query: 1149 LQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQPSIITYSELLSCLCRSGRVN 1328
             +   PD +TYT+LICGHCQ GN+EEGF+L EEML +G Q + I+Y  L   LC+SG + 
Sbjct: 340  RKEANPDILTYTILICGHCQIGNVEEGFRLREEMLLKGLQLNSISYRVLFISLCKSGHII 399

Query: 1329 EALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNPFAHSAIL 1508
            EAL LL EM+ +G  PD   YS++IHG CK G+V++A+++Y EM  KRII N F H +IL
Sbjct: 400  EALDLLSEMEKVGFKPDLFMYSMIIHGLCKIGEVQQAVELYNEMSMKRIIRNSFLHRSIL 459

Query: 1509 SGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQIFNDGLT 1688
             GLC+KR I EAR+YF TLT SDLV ++VLYNI+ID Y K G++ EA+ L+ +I   G++
Sbjct: 460  LGLCQKRTIYEARSYFNTLTNSDLVQDVVLYNIIIDRYIKLGNMGEAVELFNKISEKGIS 519

Query: 1689 PNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGKMDVVFNL 1868
            P + TFNSLI G+CK  KLA A+ L   +  H L P+ V+YTTLMNA+   G +  +F L
Sbjct: 520  PTVVTFNSLINGYCKAGKLAYAKKLFDAIKKHDLVPTIVSYTTLMNAFSEAGNIREIFVL 579

Query: 1869 LHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNTLIQGFCE 2048
            L EM+   + P  +TYTVV+KGLCK  +L+ES R L DM AKGL PDQI+YNTLI+ FC+
Sbjct: 580  LDEMKADGIEPNQVTYTVVMKGLCKNGQLEESDRLLKDMLAKGLYPDQISYNTLIKCFCK 639

Query: 2049 VKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKNIKLTKIA 2228
             ++   AF L + M+ LN+QP   TYN++ING C+ GDL  A  +   LQ +N +L+K+A
Sbjct: 640  ERNFDRAFQLHEEMVKLNVQPSCATYNILINGFCVYGDLGEAERVFNFLQEQNTRLSKVA 699

Query: 2229 YTTIIKAYCAK-GNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            YTT+IKA C K G+   A +LF +M E+G+E S+RDYSA+INRLCK
Sbjct: 700  YTTLIKAICVKGGDVERAMVLFLRMAEIGFEISVRDYSAVINRLCK 745


>gb|EMT28821.1| hypothetical protein F775_33038 [Aegilops tauschii]
          Length = 794

 Score =  644 bits (1662), Expect = 0.0
 Identities = 318/669 (47%), Positives = 465/669 (69%), Gaps = 2/669 (0%)
 Frame = +3

Query: 363  RNEHGFRHSRISQFVVCHILAGKGQLKELRRILKQMLEEEGSASAPSLCELLWNNFKEWN 542
            + E   + S  ++F +C+ L  + + +E+R  L Q++ E+GS SA +LC++LW+ F+E++
Sbjct: 76   KTEFERKASIAARFKLCYELLRQRRWREMRGGLAQIVSEQGSGSAATLCDILWSEFREYD 135

Query: 543  STSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNE 722
            S+ +VWD LAN Y +++MVHDAL+VL KM  LN Q S+STY+SL+Y +R TD+  ++++E
Sbjct: 136  SSGVVWDALANSYARTKMVHDALYVLSKMNSLNMQISVSTYDSLLYGLRKTDVALELFDE 195

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRET-EGKEFKPCVVSFSTLMSGFCNMG 899
            ++A  +  + ++++I IDGLCKQ K+ +A+ F +E  EG  F+P  +SF+TLMS  CN G
Sbjct: 196  MEAYGISHSEYSHSILIDGLCKQNKVGEALSFLQEAREGGTFRPLGMSFNTLMSALCNWG 255

Query: 900  FVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYN 1079
            F+  AKSF C+MLKYG+ P+ Y+Y+TLIHGLC  GS++EA+D  + + + G++ + VTYN
Sbjct: 256  FIQPAKSFLCLMLKYGLNPNRYTYSTLIHGLCKVGSLDEAVDLLERVTKEGMKLETVTYN 315

Query: 1080 ILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQ 1259
             L+NG+ LLGL     K IQ M  QG++PD VTYT+LI GHC+ G++EEG K+ +++L +
Sbjct: 316  SLINGYRLLGLTREIPKIIQFMRYQGIEPDLVTYTILIAGHCEGGDVEEGMKIRKDILDK 375

Query: 1260 GFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERA 1439
            G Q +I+TYS LL+ L + G V E   LL E+ +IGLD D + YSILIHG+CK G++ERA
Sbjct: 376  GLQLNIVTYSVLLNALFKKGLVYEVENLLGEIYSIGLDMDVIAYSILIHGYCKLGEIERA 435

Query: 1440 IQIYREM-LSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMID 1616
            +++   M  S++++P    H +IL GLC+K +++EAR Y E +       +++LYN++ID
Sbjct: 436  LEVCDAMCCSQKVVPTSLNHLSILLGLCKKGLLVEARWYLENVASRYQPGDVILYNVVID 495

Query: 1617 GYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAP 1796
            GYAK GDI  A+RLY+QI   G+ P I T NSL+YG+CK   L  A +  + + +  L P
Sbjct: 496  GYAKVGDIGNAVRLYDQIVVAGMNPTIITCNSLLYGYCKFGDLHAAESYFRAIEISNLVP 555

Query: 1797 SAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFL 1976
            + VTYTT M+A    GK+D + +  +EM EK + P  +TY+VVIKGLCKQ R +++  FL
Sbjct: 556  TTVTYTTFMDALSEAGKVDTMLSFFYEMVEKGIKPNAVTYSVVIKGLCKQLRFRDAIHFL 615

Query: 1977 GDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMC 2156
             +M+      D ITYNTLIQGFCE +D++ AFC+ DRML   L P PVTYN++IN LC+ 
Sbjct: 616  DNMDG----ADPITYNTLIQGFCEAQDIQMAFCIHDRMLCCGLVPTPVTYNLLINVLCLK 671

Query: 2157 GDLKGAFGLLTALQNKNIKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDY 2336
            G +  A  LL +L+ K I+L K AYTT+IKA CAKG P  A  L  ++++ G+E SI D+
Sbjct: 672  GKVFQAEMLLESLREKGIELRKFAYTTVIKAQCAKGMPYDAISLVGKLIDDGFEASIEDF 731

Query: 2337 SAIINRLCK 2363
            SA INRLCK
Sbjct: 732  SAAINRLCK 740



 Score =  193 bits (491), Expect = 3e-46
 Identities = 152/615 (24%), Positives = 286/615 (46%), Gaps = 26/615 (4%)
 Frame = +3

Query: 264  TLILYLNPSHVDRILDFLRGSDVDSALVFFNLLRNEHGFRHSRISQFVVCHILAGKGQLK 443
            +L + ++ S  D +L  LR +DV  AL  F+ +   +G  HS  S  ++   L  + ++ 
Sbjct: 166  SLNMQISVSTYDSLLYGLRKTDV--ALELFDEME-AYGISHSEYSHSILIDGLCKQNKVG 222

Query: 444  ELRRILKQMLEEEGSASAP----------SLCELLWNNF---KEWNSTSLVWDMLANVYC 584
            E    L++    EG    P          +LC   W      K +    L + +  N Y 
Sbjct: 223  EALSFLQEA--REGGTFRPLGMSFNTLMSALCN--WGFIQPAKSFLCLMLKYGLNPNRYT 278

Query: 585  KSEMVH---------DALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANR 737
             S ++H         +A+ +L ++     +    TYNSL+   R   +  +I   I+  R
Sbjct: 279  YSTLIHGLCKVGSLDEAVDLLERVTKEGMKLETVTYNSLINGYRLLGLTREIPKIIQFMR 338

Query: 738  ---VPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVD 908
               +  ++ T TI I G C+   +++ ++  ++   K  +  +V++S L++     G V 
Sbjct: 339  YQGIEPDLVTYTILIAGHCEGGDVEEGMKIRKDILDKGLQLNIVTYSVLLNALFKKGLVY 398

Query: 909  VAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQ-RHGVEPDLVTYNIL 1085
              ++    +   G+  DV +Y+ LIHG C  G +E AL+  D M     V P  + +  +
Sbjct: 399  EVENLLGEIYSIGLDMDVIAYSILIHGYCKLGEIERALEVCDAMCCSQKVVPTSLNHLSI 458

Query: 1086 VNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGF 1265
            + G C  GL+  A   ++ +  +    D + Y ++I G+ + G+I    +L ++++  G 
Sbjct: 459  LLGLCKKGLLVEARWYLENVASRYQPGDVILYNVVIDGYAKVGDIGNAVRLYDQIVVAGM 518

Query: 1266 QPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQ 1445
             P+IIT + LL   C+ G ++ A      ++   L P  VTY+  +    + GKV+  + 
Sbjct: 519  NPTIITCNSLLYGYCKFGDLHAAESYFRAIEISNLVPTTVTYTTFMDALSEAGKVDTMLS 578

Query: 1446 IYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYA 1625
             + EM+ K I PN   +S ++ GLC++    +A  + + +  +D +     YN +I G+ 
Sbjct: 579  FFYEMVEKGIKPNAVTYSVVIKGLCKQLRFRDAIHFLDNMDGADPIT----YNTLIQGFC 634

Query: 1626 KHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAV 1805
            +  DI  A  +++++   GL P   T+N LI   C   K+ +A  LL++L    +     
Sbjct: 635  EAQDIQMAFCIHDRMLCCGLVPTPVTYNLLINVLCLKGKVFQAEMLLESLREKGIELRKF 694

Query: 1806 TYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDM 1985
             YTT++ A C +G      +L+ ++ +     ++  ++  I  LCK++  KE+  F+  M
Sbjct: 695  AYTTVIKAQCAKGMPYDAISLVGKLIDDGFEASIEDFSAAINRLCKRKFPKEAVMFIPIM 754

Query: 1986 EAKGLTPDQITYNTL 2030
             + G+ PD   Y  L
Sbjct: 755  LSVGVFPDMQVYFVL 769



 Score =  159 bits (401), Expect = 7e-36
 Identities = 109/450 (24%), Positives = 206/450 (45%), Gaps = 4/450 (0%)
 Frame = +3

Query: 552  LVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYN---E 722
            + + +L   +C+   V + + +   + D   Q +I TY+ L+  +    +++++ N   E
Sbjct: 347  VTYTILIAGHCEGGDVEEGMKIRKDILDKGLQLNIVTYSVLLNALFKKGLVYEVENLLGE 406

Query: 723  IKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETE-GKEFKPCVVSFSTLMSGFCNMG 899
            I +  +  +V   +I I G CK  +++ A+         ++  P  ++  +++ G C  G
Sbjct: 407  IYSIGLDMDVIAYSILIHGYCKLGEIERALEVCDAMCCSQKVVPTSLNHLSILLGLCKKG 466

Query: 900  FVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYN 1079
             +  A+ +   +       DV  YN +I G    G +  A+   D +   G+ P ++T N
Sbjct: 467  LLVEARWYLENVASRYQPGDVILYNVVIDGYAKVGDIGNAVRLYDQIVVAGMNPTIITCN 526

Query: 1080 ILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQ 1259
             L+ G+C  G +  A    + + +  L P  VTYT  +    + G ++       EM+ +
Sbjct: 527  SLLYGYCKFGDLHAAESYFRAIEISNLVPTTVTYTTFMDALSEAGKVDTMLSFFYEMVEK 586

Query: 1260 GFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERA 1439
            G +P+ +TYS ++  LC+  R  +A+  LD M       DP+TY+ LI GFC+   ++ A
Sbjct: 587  GIKPNAVTYSVVIKGLCKQLRFRDAIHFLDNMDGA----DPITYNTLIQGFCEAQDIQMA 642

Query: 1440 IQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDG 1619
              I+  ML   ++P P  ++ +++ LC K  + +A    E+L +  + +    Y  +I  
Sbjct: 643  FCIHDRMLCCGLVPTPVTYNLLINVLCLKGKVFQAEMLLESLREKGIELRKFAYTTVIKA 702

Query: 1620 YAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPS 1799
                G   +AI L  ++ +DG   +I  F++ I   CK K   EA   +  +    + P 
Sbjct: 703  QCAKGMPYDAISLVGKLIDDGFEASIEDFSAAINRLCKRKFPKEAVMFIPIMLSVGVFPD 762

Query: 1800 AVTYTTLMNAYCREGKMDVVFNLLHEMEEK 1889
               Y  L  A  R+  M     +LH +  K
Sbjct: 763  MQVYFVLARA-LRKSNMLCYIPILHALSVK 791


>ref|XP_004239448.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g13630-like [Solanum lycopersicum]
          Length = 648

 Score =  640 bits (1650), Expect = e-180
 Identities = 324/592 (54%), Positives = 420/592 (70%), Gaps = 2/592 (0%)
 Frame = +3

Query: 594  MVHDALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDIYNEIKANRVPRNVHTNTIFI 773
            MV DALFV  KMKD + QAS+ TYN+L+YN+RHTD IWD+Y ++K + +  + HTN+I I
Sbjct: 1    MVDDALFVFAKMKDFDIQASVFTYNNLLYNLRHTDYIWDVYYDMKDSGINPSEHTNSILI 60

Query: 774  DGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDVAKSFFCMMLKYGVR 953
            DGLCKQ  +Q AV F R TE +E +PCVVSF+ LMS FC MG VDVAKSFFCMM K G  
Sbjct: 61   DGLCKQFLIQKAVNFVRGTECRESEPCVVSFNALMSSFCKMGSVDVAKSFFCMMFKCGFY 120

Query: 954  PDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVNGFCLLGLMSGAWKA 1133
            P++YSYN LIHGL VAG+MEEAL+F D+M++HG+EPDL TYN+L  GF LLG+M+G  K 
Sbjct: 121  PNIYSYNILIHGLSVAGAMEEALEFIDNMKKHGLEPDLETYNVLAKGFHLLGMMNGIRKF 180

Query: 1134 IQKMLLQGLKPDQVTYTLLICGHCQRGNIEE-GFKLLEEMLA-QGFQPSIITYSELLSCL 1307
            I KML +G+ PD  TYT+L CG+C+ GNI+E   KL +EM + +G   S I+ + LLS L
Sbjct: 181  INKMLHKGMNPDIFTYTMLNCGYCKEGNIDEKSIKLRKEMFSKEGVHASAISDNMLLSSL 240

Query: 1308 CRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKVERAIQIYREMLSKRIIPNP 1487
            C+SGR++EA+ L  E+++ G   D + YSILI G CKQG V+ A Q+Y++M  KRIIPN 
Sbjct: 241  CKSGRLDEAMNLFHEIESNGRKLDHIMYSILIQGLCKQGLVDMAFQLYKDMCCKRIIPNI 300

Query: 1488 FAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIMIDGYAKHGDINEAIRLYEQ 1667
             AH +IL   CEKR I EAR  F+ L   DL+ +I L NIMIDGYAK GDI EA+++Y+ 
Sbjct: 301  VAHRSILKSFCEKRYIYEARVLFDALIYCDLIDDIFLVNIMIDGYAKLGDIGEAVQVYKL 360

Query: 1668 IFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRLAPSAVTYTTLMNAYCREGK 1847
            I   G+TP+I TFNSLIYGFCK +KL +AR  + T+  H L PSA T+TTLMNAY  EGK
Sbjct: 361  ITGKGITPSIATFNSLIYGFCKARKLDDARKWVDTICAHGLIPSARTFTTLMNAYGEEGK 420

Query: 1848 MDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFRFLGDMEAKGLTPDQITYNT 2027
            M  VF LL EM+ + + PT +TYTV++K LCK+R++ ES   L  M       D++ YNT
Sbjct: 421  MQTVFELLDEMKARGIEPTHVTYTVIMKCLCKRRQMHESIEILKSMLPDDFQRDEVFYNT 480

Query: 2028 LIQGFCEVKDMRAAFCLLDRMLLLNLQPGPVTYNVIINGLCMCGDLKGAFGLLTALQNKN 2207
            +I+  CE +D+  A  L   M +  LQP  VTYN+++NG C  G+LK A  L + LQ  +
Sbjct: 481  IIKSLCEARDVEGACKLYKEMAVHKLQPSRVTYNILLNGYCTHGELKDAEELFSELQ--D 538

Query: 2208 IKLTKIAYTTIIKAYCAKGNPRMAGILFNQMVEMGYETSIRDYSAIINRLCK 2363
            + L K  YT +IKAYCAKG+   A +LF +M+E G+E +IRDYSA+INRLCK
Sbjct: 539  VGLMKCDYTILIKAYCAKGSVHKAVVLFQKMIEKGFEITIRDYSAVINRLCK 590



 Score =  178 bits (451), Expect = 1e-41
 Identities = 131/525 (24%), Positives = 245/525 (46%), Gaps = 14/525 (2%)
 Frame = +3

Query: 573  NVYCKSEMVH---------DALFVLGKMKDLNFQASISTYNSLMYNVRHTDMIWDI---Y 716
            N+Y  + ++H         +AL  +  MK    +  + TYN L        M+  I    
Sbjct: 122  NIYSYNILIHGLSVAGAMEEALEFIDNMKKHGLEPDLETYNVLAKGFHLLGMMNGIRKFI 181

Query: 717  NEIKANRVPRNVHTNTIFIDGLCKQAKLQD-AVRFFRETEGKE-FKPCVVSFSTLMSGFC 890
            N++    +  ++ T T+   G CK+  + + +++  +E   KE      +S + L+S  C
Sbjct: 182  NKMLHKGMNPDIFTYTMLNCGYCKEGNIDEKSIKLRKEMFSKEGVHASAISDNMLLSSLC 241

Query: 891  NMGFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLV 1070
              G +D A + F  +   G + D   Y+ LI GLC  G ++ A     DM    + P++V
Sbjct: 242  KSGRLDEAMNLFHEIESNGRKLDHIMYSILIQGLCKQGLVDMAFQLYKDMCCKRIIPNIV 301

Query: 1071 TYNILVNGFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEM 1250
             +  ++  FC    +  A      ++   L  D     ++I G+ + G+I E  ++ + +
Sbjct: 302  AHRSILKSFCEKRYIYEARVLFDALIYCDLIDDIFLVNIMIDGYAKLGDIGEAVQVYKLI 361

Query: 1251 LAQGFQPSIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGFCKQGKV 1430
              +G  PSI T++ L+   C++ ++++A   +D + A GL P   T++ L++ + ++GK+
Sbjct: 362  TGKGITPSIATFNSLIYGFCKARKLDDARKWVDTICAHGLIPSARTFTTLMNAYGEEGKM 421

Query: 1431 ERAIQIYREMLSKRIIPNPFAHSAILSGLCEKRMILEARAYFETLTKSDLVVNIVLYNIM 1610
            +   ++  EM ++ I P    ++ I+  LC++R + E+    +++   D   + V YN +
Sbjct: 422  QTVFELLDEMKARGIEPTHVTYTVIMKCLCKRRQMHESIEILKSMLPDDFQRDEVFYNTI 481

Query: 1611 IDGYAKHGDINEAIRLYEQIFNDGLTPNIFTFNSLIYGFCKNKKLAEARALLQTLNVHRL 1790
            I    +  D+  A +LY+++    L P+  T+N L+ G+C + +L +A  L   L    L
Sbjct: 482  IKSLCEARDVEGACKLYKEMAVHKLQPSRVTYNILLNGYCTHGELKDAEELFSELQDVGL 541

Query: 1791 APSAVTYTTLMNAYCREGKMDVVFNLLHEMEEKAVAPTVITYTVVIKGLCKQRRLKESFR 1970
                  YT L+ AYC +G +     L  +M EK    T+  Y+ VI  LCK+  L     
Sbjct: 542  MKC--DYTILIKAYCAKGSVHKAVVLFQKMIEKGFEITIRDYSAVINRLCKRNLLAGVDI 599

Query: 1971 FLGDMEAKGLTPDQITYNTLIQGFCEVKDMRAAFCLLDRMLLLNL 2105
            FL  M   G++ D      ++  F   +D  + F L   M+   L
Sbjct: 600  FLRMMLFHGISVDSQICFLMLNSF---RDHNSVFQLASLMIKCGL 641



 Score =  103 bits (257), Expect = 4e-19
 Identities = 72/287 (25%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
 Frame = +3

Query: 561  DMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMY---NVRHTDMIWDIYNEIKA 731
            +++ + Y K   + +A+ V   +       SI+T+NSL+Y     R  D      + I A
Sbjct: 339  NIMIDGYAKLGDIGEAVQVYKLITGKGITPSIATFNSLIYGFCKARKLDDARKWVDTICA 398

Query: 732  NRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNMGFVDV 911
            + +  +  T T  ++   ++ K+Q       E + +  +P  V+++ +M   C    +  
Sbjct: 399  HGLIPSARTFTTLMNAYGEEGKMQTVFELLDEMKARGIEPTHVTYTVIMKCLCKRRQMHE 458

Query: 912  AKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTYNILVN 1091
            +      ML    + D   YNT+I  LC A  +E A     +M  H ++P  VTYNIL+N
Sbjct: 459  SIEILKSMLPDDFQRDEVFYNTIIKSLCEARDVEGACKLYKEMAVHKLQPSRVTYNILLN 518

Query: 1092 GFCLLGLMSGAWKAIQKMLLQGLKPDQVTYTLLICGHCQRGNIEEGFKLLEEMLAQGFQP 1271
            G+C  G +  A +   ++   GL   +  YT+LI  +C +G++ +   L ++M+ +GF+ 
Sbjct: 519  GYCTHGELKDAEELFSELQDVGLM--KCDYTILIKAYCAKGSVHKAVVLFQKMIEKGFEI 576

Query: 1272 SIITYSELLSCLCRSGRVNEALGLLDEMKAIGLDPDPVTYSILIHGF 1412
            +I  YS +++ LC+   +      L  M   G+  D     ++++ F
Sbjct: 577  TIRDYSAVINRLCKRNLLAGVDIFLRMMLFHGISVDSQICFLMLNSF 623



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 3/187 (1%)
 Frame = +3

Query: 546  TSLVWDMLANVYCKSEMVHDALFVLGKMKDLNFQASISTYNSLMYNV---RHTDMIWDIY 716
            T + + ++    CK   +H+++ +L  M   +FQ     YN+++ ++   R  +    +Y
Sbjct: 439  THVTYTVIMKCLCKRRQMHESIEILKSMLPDDFQRDEVFYNTIIKSLCEARDVEGACKLY 498

Query: 717  NEIKANRVPRNVHTNTIFIDGLCKQAKLQDAVRFFRETEGKEFKPCVVSFSTLMSGFCNM 896
             E+  +++  +  T  I ++G C   +L+DA   F E +      C   ++ L+  +C  
Sbjct: 499  KEMAVHKLQPSRVTYNILLNGYCTHGELKDAEELFSELQDVGLMKC--DYTILIKAYCAK 556

Query: 897  GFVDVAKSFFCMMLKYGVRPDVYSYNTLIHGLCVAGSMEEALDFSDDMQRHGVEPDLVTY 1076
            G V  A   F  M++ G    +  Y+ +I+ LC    +     F   M  HG+  D    
Sbjct: 557  GSVHKAVVLFQKMIEKGFEITIRDYSAVINRLCKRNLLAGVDIFLRMMLFHGISVDSQIC 616

Query: 1077 NILVNGF 1097
             +++N F
Sbjct: 617  FLMLNSF 623