BLASTX nr result

ID: Akebia24_contig00018095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00018095
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]    77   3e-12
ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_006447073.1| hypothetical protein CICLE_v10018352mg [Citr...    69   7e-10
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    60   2e-07

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/45 (82%), Positives = 44/45 (97%)
 Frame = -3

Query: 137 FSLLADKCSSMNQLKQIHAQMIVSARIYDNYAASRIIAFSALSDS 3
           FSLLADKC+SM+QLKQIHAQMIVSARI+DNYAASR+++F ALS+S
Sbjct: 29  FSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSES 73


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 MFPPKP-RLAKHSIYYLSPFQTHTSIXXXXXXXXXXXPFSLLADKCSSMNQLKQIHAQMI 72
           M PPKP    K SI         TS+             SLLADKC+SM+QLKQIHAQMI
Sbjct: 1   MRPPKPPSFTKLSIL--------TSVLHPPPPPPPPPRXSLLADKCTSMHQLKQIHAQMI 52

Query: 71  VSARIYDNYAASRIIAFSALSDS 3
           VSARI+DNYAASR+++F ALS+S
Sbjct: 53  VSARIHDNYAASRLLSFCALSES 75


>ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum tuberosum]
          Length = 477

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/44 (77%), Positives = 44/44 (100%)
 Frame = -3

Query: 134 SLLADKCSSMNQLKQIHAQMIVSARIYDNYAASRIIAFSALSDS 3
           SLLAD+C+S++QLKQIHAQMI+SARI+DNYAASR+++FSALS+S
Sbjct: 33  SLLADQCTSLHQLKQIHAQMIISARIHDNYAASRLLSFSALSES 76


>ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum lycopersicum]
          Length = 477

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/44 (75%), Positives = 42/44 (95%)
 Frame = -3

Query: 134 SLLADKCSSMNQLKQIHAQMIVSARIYDNYAASRIIAFSALSDS 3
           SLLAD+C+S++QLKQIHAQMIV ARI+DN+AASR+++FSALS S
Sbjct: 33  SLLADQCTSLHQLKQIHAQMIVRARIHDNFAASRLLSFSALSQS 76


>ref|XP_006447073.1| hypothetical protein CICLE_v10018352mg [Citrus clementina]
           gi|568831618|ref|XP_006470058.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Citrus sinensis]
           gi|557549684|gb|ESR60313.1| hypothetical protein
           CICLE_v10018352mg [Citrus clementina]
          Length = 463

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/44 (75%), Positives = 40/44 (90%)
 Frame = -3

Query: 134 SLLADKCSSMNQLKQIHAQMIVSARIYDNYAASRIIAFSALSDS 3
           SLLADKC SM+QLKQIHAQMI+S+RI D++AASR++AF ALS S
Sbjct: 19  SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/42 (64%), Positives = 38/42 (90%)
 Frame = -3

Query: 128 LADKCSSMNQLKQIHAQMIVSARIYDNYAASRIIAFSALSDS 3
           + DKC+SM QLKQIHAQMI+++RI D++AASR+++F ALS+S
Sbjct: 55  MVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNS 96


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