BLASTX nr result
ID: Akebia24_contig00018010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00018010
(527 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera] 61 1e-07
emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera] 61 1e-07
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 61 2e-07
ref|XP_006387760.1| hypothetical protein POPTR_0605s00010g [Popu... 59 7e-07
ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, part... 59 9e-07
ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264... 57 3e-06
ref|XP_006369958.1| hypothetical protein POPTR_0001s36275g [Popu... 56 5e-06
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 55 5e-06
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 53 5e-06
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 51 6e-06
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana] 53 6e-06
>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
Length = 1556
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +2
Query: 26 FIAWRRSDRLLHGWITGSLSEGIFGMVVRFETASEVWDTLINSFSQES 169
+IAWR++DRLL GWI G+LSE G+ V +TA++VW+ L N+++++S
Sbjct: 333 YIAWRKADRLLRGWIIGTLSEETLGLAVGLDTANDVWEALKNAYAEDS 380
>emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]
Length = 1412
Score = 61.2 bits (147), Expect = 1e-07
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +2
Query: 26 FIAWRRSDRLLHGWITGSLSEGIFGMVVRFETASEVWDTLINSFSQES 169
+IAWR++DRLL GWI G+LSE G+ V +TA++VW+ L N+++++S
Sbjct: 73 YIAWRKADRLLRGWIIGTLSEETLGLAVGLDTANDVWEALKNAYAEDS 120
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 60.8 bits (146), Expect = 2e-07
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Frame = +1
Query: 133 MGYSNKFIFSRISTMCIFGLGYRCLYRPAGLVFISRHVVFDEITFPFKDSGELFSTIHSN 312
+GY+NK+ GYRCL+ P G V+I RHV+FDE FP+ D F TI +
Sbjct: 710 LGYNNKY------------KGYRCLHPPTGKVYICRHVLFDERKFPYSDIYSQFQTISGS 757
Query: 313 EEITAFVEYFSGP--TEDTP------LVHSSPYVGSS----DSPDPSKFQVQP--NLLAS 450
TA+ + FS + +TP ++ S V SS +P+ ++ P ++ A+
Sbjct: 758 PLFTAWQKGFSSTALSRETPSTNVEDIIFPSATVSSSVPTGCAPNIAETATAPDVDVAAA 817
Query: 451 HHIVSTNDEEVSPNNPIENEESTT 522
H +V S + P + EEST+
Sbjct: 818 HDMVVPPSPITSTSLPTQPEESTS 841
>ref|XP_006387760.1| hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
gi|550308379|gb|ERP46674.1| hypothetical protein
POPTR_0605s00010g [Populus trichocarpa]
Length = 204
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +2
Query: 26 FIAWRRSDRLLHGWITGSLSEGIFGMVVRFETASEVWDTLINSFSQES 169
FI WR+SDRLL GWI G+LSE VV ET S VW+ L N+++++S
Sbjct: 73 FITWRKSDRLLRGWIIGTLSEEALSHVVGLETTSAVWEALKNAYAKDS 120
>ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, partial [Citrus clementina]
gi|557530342|gb|ESR41525.1| hypothetical protein
CICLE_v10013389mg, partial [Citrus clementina]
Length = 127
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +2
Query: 26 FIAWRRSDRLLHGWITGSLSEGIFGMVVRFETASEVWDTLINSFSQES 169
+I WRRSDRLL GWI G+LSE + G+VV ET++ VW L F++ +
Sbjct: 77 YIMWRRSDRLLRGWIVGTLSEEVLGLVVGIETSAAVWKALSEYFARNT 124
>ref|XP_002270154.1| PREDICTED: uncharacterized protein LOC100264911 [Vitis vinifera]
Length = 1946
Score = 57.0 bits (136), Expect = 3e-06
Identities = 21/48 (43%), Positives = 36/48 (75%)
Frame = +2
Query: 26 FIAWRRSDRLLHGWITGSLSEGIFGMVVRFETASEVWDTLINSFSQES 169
+I WR++DRLL GWI G+LSE G+ + +T ++VW+ L N+++++S
Sbjct: 177 YITWRKADRLLRGWIIGTLSEETLGLAMGLDTTNDVWEALKNAYAEDS 224
>ref|XP_006369958.1| hypothetical protein POPTR_0001s36275g [Populus trichocarpa]
gi|550349005|gb|ERP66527.1| hypothetical protein
POPTR_0001s36275g [Populus trichocarpa]
Length = 277
Score = 56.2 bits (134), Expect = 5e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +2
Query: 26 FIAWRRSDRLLHGWITGSLSEGIFGMVVRFETASEVWDTLINSFSQES 169
FIAWR++DRLL WI G+LSE +VV +TA VW+ N+++Q+S
Sbjct: 73 FIAWRKADRLLRWWIIGTLSEETLSLVVGLDTAHAVWEAFKNAYAQDS 120
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 55.1 bits (131), Expect(2) = 5e-06
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 193 GYRCLYRPAGLVFISRHVVFDEITFPFKDSGELFSTIHSNEEITAFVEYFSGPTEDTPLV 372
GYRCLY P G ++ISRHVVFDE T PF+ ++S +H ++ +F TP
Sbjct: 721 GYRCLYPPTGRIYISRHVVFDENTHPFE---SIYSHLHPQDKTPLLEAWFKSFHHVTPTQ 777
Query: 373 --HSSPYVGSSDSPDPSKFQVQPNLLASHHIVSTNDEEVSPNN 495
S V S P+ + P +A+ ++ S +N
Sbjct: 778 PDQSRYPVSSIPQPETTDLSAAPASVAAETAGPNASDDTSQDN 820
Score = 20.8 bits (42), Expect(2) = 5e-06
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 137 DTLINSFSQESLPCVFLG 190
D F SL CVFLG
Sbjct: 697 DYASTKFDPRSLKCVFLG 714
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 53.1 bits (126), Expect(2) = 5e-06
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +1
Query: 193 GYRCLYRPAGLVFISRHVVFDEITFPFKDSGELFSTIHSNEEITAFVEYFSGP-----TE 357
GYRCLY P G V+ISRHV+FDE FPFK+ + + A+ P ++
Sbjct: 718 GYRCLYPPTGKVYISRHVIFDEAQFPFKEKYHSLVPKYQTTLLQAWQHTDLTPPSVPSSQ 777
Query: 358 DTPLVHSSPYVGSSDSPDPSKFQVQPNLLASHHIVSTNDEEVSPNNPIENE 510
PL + +S++ ++ + + ++ +++DEE N+ ++E
Sbjct: 778 LQPLARQMTPMATSENQPMMNYETEE--AVNVNMETSSDEETESNDEFDHE 826
Score = 22.7 bits (47), Expect(2) = 5e-06
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 149 NSFSQESLPCVFLG 190
N F SL CVFLG
Sbjct: 698 NKFDPRSLQCVFLG 711
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 51.2 bits (121), Expect(2) = 6e-06
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 193 GYRCLYRPAGLVFISRHVVFDEITFPFKDSGELFSTIHSNEEITAFVEYFSG 348
GYRCLY P G V+ISRHV+FDE +PF + +HS +F G
Sbjct: 727 GYRCLYPPTGRVYISRHVIFDETAYPFSHH---YKHLHSQPTTPLLAAWFKG 775
Score = 24.3 bits (51), Expect(2) = 6e-06
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 137 DTLINSFSQESLPCVFLG 190
D +N F SL CVFLG
Sbjct: 703 DYAMNKFDPRSLKCVFLG 720
>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
Length = 1309
Score = 52.8 bits (125), Expect(2) = 6e-06
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +1
Query: 193 GYRCLYRPAGLVFISRHVVFDEITFPFKDSGELFSTIHSNEEITAFVEYFSGP-----TE 357
GYRCLY P G V+ISRHV+FDE FPFK+ + + A+ P ++
Sbjct: 561 GYRCLYPPTGKVYISRHVIFDEAQFPFKEKYHSLVPKYQTTLLQAWQHTDLTPPSVPSSQ 620
Query: 358 DTPLVHSSPYVGSSDSPDPSKFQVQPNLLASHHIVSTNDEEVSPNNPIENE 510
PL + +S++ ++ + + ++ +++DEE N+ ++E
Sbjct: 621 LQPLARQVTPMATSENQPMMNYETEE--AVNVNMETSSDEETESNDEFDHE 669
Score = 22.7 bits (47), Expect(2) = 6e-06
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 149 NSFSQESLPCVFLG 190
N F SL CVFLG
Sbjct: 541 NKFDPRSLQCVFLG 554