BLASTX nr result

ID: Akebia24_contig00017416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00017416
         (363 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007024965.1| Auxin response factor 6 isoform 4 [Theobroma...    58   2e-06
ref|XP_007024963.1| Auxin response factor 6 isoform 2 [Theobroma...    58   2e-06
ref|XP_007024962.1| Auxin response factor 6 isoform 1 [Theobroma...    58   2e-06
emb|CBI30949.3| unnamed protein product [Vitis vinifera]               58   2e-06
ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vit...    58   2e-06
ref|XP_002298839.1| auxin response factor 6 family protein [Popu...    56   6e-06

>ref|XP_007024965.1| Auxin response factor 6 isoform 4 [Theobroma cacao]
           gi|508780331|gb|EOY27587.1| Auxin response factor 6
           isoform 4 [Theobroma cacao]
          Length = 604

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/39 (76%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
 Frame = -3

Query: 361 LLNSV--QRLSSGSCDDYASLQDSRNRSSGVTSVSSLDY 251
           LLNSV  QRLS+GSCDDY S QDSRN SSG+ SV SLDY
Sbjct: 566 LLNSVPVQRLSNGSCDDYVSRQDSRNLSSGIASVGSLDY 604


>ref|XP_007024963.1| Auxin response factor 6 isoform 2 [Theobroma cacao]
           gi|508780329|gb|EOY27585.1| Auxin response factor 6
           isoform 2 [Theobroma cacao]
          Length = 902

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/39 (76%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
 Frame = -3

Query: 361 LLNSV--QRLSSGSCDDYASLQDSRNRSSGVTSVSSLDY 251
           LLNSV  QRLS+GSCDDY S QDSRN SSG+ SV SLDY
Sbjct: 864 LLNSVPVQRLSNGSCDDYVSRQDSRNLSSGIASVGSLDY 902


>ref|XP_007024962.1| Auxin response factor 6 isoform 1 [Theobroma cacao]
           gi|508780328|gb|EOY27584.1| Auxin response factor 6
           isoform 1 [Theobroma cacao]
          Length = 899

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/39 (76%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
 Frame = -3

Query: 361 LLNSV--QRLSSGSCDDYASLQDSRNRSSGVTSVSSLDY 251
           LLNSV  QRLS+GSCDDY S QDSRN SSG+ SV SLDY
Sbjct: 861 LLNSVPVQRLSNGSCDDYVSRQDSRNLSSGIASVGSLDY 899


>emb|CBI30949.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
 Frame = -3

Query: 361 LLNSV--QRLSSGSCDDYASLQDSRNRSSGVTSVSSLDY 251
           LLNSV  QRL+S SCDDYAS QDSRN S+G+TSV SLDY
Sbjct: 122 LLNSVPIQRLTSSSCDDYASRQDSRNLSTGITSVGSLDY 160


>ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 2/39 (5%)
 Frame = -3

Query: 361 LLNSV--QRLSSGSCDDYASLQDSRNRSSGVTSVSSLDY 251
           LLNSV  QRL+S SCDDYAS QDSRN S+G+TSV SLDY
Sbjct: 870 LLNSVPIQRLTSSSCDDYASRQDSRNLSTGITSVGSLDY 908


>ref|XP_002298839.1| auxin response factor 6 family protein [Populus trichocarpa]
           gi|222846097|gb|EEE83644.1| auxin response factor 6
           family protein [Populus trichocarpa]
          Length = 884

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 34/39 (87%), Gaps = 2/39 (5%)
 Frame = -3

Query: 361 LLNS--VQRLSSGSCDDYASLQDSRNRSSGVTSVSSLDY 251
           LLNS  +QRLS+GSCDDYA+ QDS++ S+G+TSV SLDY
Sbjct: 846 LLNSFPIQRLSNGSCDDYANRQDSKSSSTGITSVGSLDY 884