BLASTX nr result
ID: Akebia24_contig00017190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00017190
(266 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFG66680.1| hypothetical protein 0_14992_02, partial [Pinus t... 70 2e-10
emb|CBI35582.3| unnamed protein product [Vitis vinifera] 69 7e-10
ref|XP_002893541.1| pentatricopeptide repeat-containing protein ... 69 9e-10
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera] 69 9e-10
ref|XP_006415632.1| hypothetical protein EUTSA_v10009590mg [Eutr... 68 1e-09
gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana] 68 2e-09
ref|NP_174190.2| pentatricopeptide repeat-containing protein [Ar... 68 2e-09
gb|ABK28420.1| unknown [Arabidopsis thaliana] 68 2e-09
gb|ABE65668.1| pentatricopeptide repeat-containing protein [Arab... 68 2e-09
ref|XP_007198997.1| hypothetical protein PRUPE_ppa002025mg [Prun... 67 2e-09
emb|CBI20844.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-09
emb|CBI30660.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 67 3e-09
ref|XP_006307253.1| hypothetical protein CARUB_v10008869mg [Caps... 67 3e-09
ref|XP_007220035.1| hypothetical protein PRUPE_ppb002505mg [Prun... 67 3e-09
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
>gb|AFG66680.1| hypothetical protein 0_14992_02, partial [Pinus taeda]
gi|383167278|gb|AFG66681.1| hypothetical protein
0_14992_02, partial [Pinus taeda]
gi|383167279|gb|AFG66682.1| hypothetical protein
0_14992_02, partial [Pinus taeda]
gi|383167280|gb|AFG66683.1| hypothetical protein
0_14992_02, partial [Pinus taeda]
Length = 150
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 10/78 (12%)
Frame = +2
Query: 62 LKASVSTFSLVRPI----------QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFAR 211
++A TF+ V P+ +EIH ++ + G +DVYVG+ L+D Y KCG +E AR
Sbjct: 33 IRADHFTFASVLPVCGNLGNLEQGKEIHHEINRSGYQSDVYVGSALVDMYVKCGSVEDAR 92
Query: 212 NVFEEMPVKNVVSWNSMI 265
VF++MP ++V+SWNSMI
Sbjct: 93 QVFDKMPRRDVISWNSMI 110
>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +2
Query: 59 LLKASVSTFSLVRPIQEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVK 238
+LKA F VR +E+H + K G +DV+VG TLL Y CGG+ A VF+EMP K
Sbjct: 47 VLKACADAFE-VRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK 105
Query: 239 NVVSWNSMI 265
++VSWN+MI
Sbjct: 106 DLVSWNTMI 114
>ref|XP_002893541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339383|gb|EFH69800.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 520
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H Q+ K G Y + +G++LLD Y+KCGGI+ AR VF++M KNV SW SMI
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIDDARRVFDQMQEKNVFSWTSMI 346
>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +2
Query: 59 LLKASVSTFSLVRPIQEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVK 238
+LKA F VR +E+H + K G +DV+VG TLL Y CGG+ A VF+EMP K
Sbjct: 47 VLKACADAFE-VRKGREVHGXVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK 105
Query: 239 NVVSWNSMI 265
++VSWN+MI
Sbjct: 106 DLVSWNTMI 114
>ref|XP_006415632.1| hypothetical protein EUTSA_v10009590mg [Eutrema salsugineum]
gi|557093403|gb|ESQ33985.1| hypothetical protein
EUTSA_v10009590mg [Eutrema salsugineum]
Length = 523
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H Q+ K G Y + +G++LLD Y+KCGGI+ AR VF++M KNV SW SMI
Sbjct: 293 QQVHAQVMKSGVYTHIKMGSSLLDMYAKCGGIDDARRVFDQMQEKNVFSWTSMI 346
>gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana]
Length = 841
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H Q+ K G Y + +G++LLD Y+KCGGI AR VF++M KNV SW SMI
Sbjct: 614 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 667
>ref|NP_174190.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806502|sp|Q1PFQ9.2|PPR62_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g28690, mitochondrial; Flags: Precursor
gi|332192893|gb|AEE31014.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H Q+ K G Y + +G++LLD Y+KCGGI AR VF++M KNV SW SMI
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
>gb|ABK28420.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H Q+ K G Y + +G++LLD Y+KCGGI AR VF++M KNV SW SMI
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
>gb|ABE65668.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H Q+ K G Y + +G++LLD Y+KCGGI AR VF++M KNV SW SMI
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
>ref|XP_007198997.1| hypothetical protein PRUPE_ppa002025mg [Prunus persica]
gi|462394397|gb|EMJ00196.1| hypothetical protein
PRUPE_ppa002025mg [Prunus persica]
Length = 727
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++H +L K G +DVYVG L Y+K G IE+A VFEEMPVK++VSWNSMI
Sbjct: 71 QKVHGKLFKVGLDSDVYVGNALCAVYAKLGCIEYAERVFEEMPVKDMVSWNSMI 124
>emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2
Query: 71 SVSTFSLVRPIQEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVS 250
+VS+++ V + +H + K G +YVG+ ++D YSKCG +E A+ VF MP KNVVS
Sbjct: 458 AVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVS 517
Query: 251 WNSMI 265
WNSMI
Sbjct: 518 WNSMI 522
>ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Solanum tuberosum]
Length = 596
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q IH K G +DV+VG++L+D Y+KCG IE AR VF++MP +NVVSW+ MI
Sbjct: 144 QSIHCFSFKIGFDSDVFVGSSLVDMYAKCGNIEIARKVFDQMPERNVVSWSGMI 197
>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++ +QL K Y D+ +G+ L+D YSKCG IE AR VF+ MP KNV SW SMI
Sbjct: 302 QQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMI 355
>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 67.0 bits (162), Expect = 3e-09
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +2
Query: 92 VRPIQEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
VR +E+H Q + G + DV V + L+D Y+KCG IE+A+ +F++MPV+N+++WNSMI
Sbjct: 376 VRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 433
>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial [Vitis vinifera]
Length = 533
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
Q++ +QL K Y D+ +G+ L+D YSKCG IE AR VF+ MP KNV SW SMI
Sbjct: 302 QQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMI 355
>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 67.0 bits (162), Expect = 3e-09
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +2
Query: 92 VRPIQEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
VR +E+H Q + G + DV V + L+D Y+KCG IE+A+ +F++MPV+N+++WNSMI
Sbjct: 435 VRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 492
>ref|XP_006307253.1| hypothetical protein CARUB_v10008869mg [Capsella rubella]
gi|482575964|gb|EOA40151.1| hypothetical protein
CARUB_v10008869mg [Capsella rubella]
Length = 517
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2
Query: 104 QEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNSMI 265
+++H Q+ K G Y + +G++LLD Y+KCGGI+ AR VF++M KNV SW SMI
Sbjct: 290 EQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIDDARRVFDQMLEKNVFSWTSMI 343
>ref|XP_007220035.1| hypothetical protein PRUPE_ppb002505mg [Prunus persica]
gi|462416497|gb|EMJ21234.1| hypothetical protein
PRUPE_ppb002505mg [Prunus persica]
Length = 602
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 68 ASVSTFSLVRPIQE-IHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNV 244
+ + SL R I E IH G Y DV++G L+D Y KCG +FA VF EMPV+NV
Sbjct: 228 SKLGDLSLGRKINEYIHDN----GVYRDVFIGNALVDMYLKCGDADFAYKVFNEMPVRNV 283
Query: 245 VSWNSMI 265
VSWNSMI
Sbjct: 284 VSWNSMI 290
>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 66.6 bits (161), Expect = 3e-09
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Frame = +2
Query: 59 LLKASVSTFSLVRPIQ---EIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEM 229
LLKA V++ LV +Q EIH + + G A V+V TTL+D Y++ G + +A VF+EM
Sbjct: 176 LLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235
Query: 230 PVKNVVSWNSMI 265
PVKNVVSW++MI
Sbjct: 236 PVKNVVSWSAMI 247
>ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +2
Query: 92 VRPIQEIHTQLTKFGTYADVYVGTTLLDSYSKCGGIEFARNVFEEMPVKNVVSWNS 259
V P++ +H+ + K G+ D YVG L+D+YSK GG A VFEEMP ++VVSWNS
Sbjct: 135 VAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNS 190