BLASTX nr result
ID: Akebia24_contig00017018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00017018
(584 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii] 106 5e-21
tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays] 102 1e-19
gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indi... 102 1e-19
ref|XP_007202760.1| hypothetical protein PRUPE_ppa013411mg [Prun... 100 2e-19
gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indi... 100 2e-19
ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831... 100 3e-19
gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticu... 100 3e-19
gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu] 100 4e-19
tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays] 100 4e-19
gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japo... 100 4e-19
gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays] 100 4e-19
ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group] g... 100 4e-19
ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [B... 100 5e-19
ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [B... 100 5e-19
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr... 99 8e-19
gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis] 97 2e-18
gb|EXB79987.1| Nicotinamide mononucleotide adenylyltransferase 1... 97 2e-18
gb|EXB53855.1| 40S ribosomal protein S28 [Morus notabilis] 97 2e-18
emb|CAA04565.1| rpS28 [Hordeum vulgare subsp. vulgare] 97 2e-18
ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays] gi|1173... 97 3e-18
>gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii]
Length = 107
Score = 106 bits (264), Expect = 5e-21
Identities = 56/64 (87%), Positives = 58/64 (90%), Gaps = 2/64 (3%)
Frame = +2
Query: 83 SRRPRLGDDPR--MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVR 256
SR+ R GD R MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVR
Sbjct: 30 SRKARFGDRDRDGMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVR 89
Query: 257 EGDI 268
EGDI
Sbjct: 90 EGDI 93
>tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays]
Length = 103
Score = 102 bits (253), Expect = 1e-19
Identities = 54/61 (88%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +2
Query: 89 RPRL-GDDPRMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD 265
RPRL MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD
Sbjct: 29 RPRLCARSESMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGD 88
Query: 266 I 268
I
Sbjct: 89 I 89
>gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indica Group]
Length = 400
Score = 102 bits (253), Expect = 1e-19
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +2
Query: 113 RMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
RMD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 335 RMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 386
>ref|XP_007202760.1| hypothetical protein PRUPE_ppa013411mg [Prunus persica]
gi|462398291|gb|EMJ03959.1| hypothetical protein
PRUPE_ppa013411mg [Prunus persica]
Length = 124
Score = 100 bits (250), Expect = 2e-19
Identities = 54/66 (81%), Positives = 55/66 (83%), Gaps = 4/66 (6%)
Frame = +2
Query: 83 SRRPRLGDDP----RMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP 250
SRRP L P RMDS +K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGP
Sbjct: 45 SRRPVLQSQPLDNQRMDSTIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGP 104
Query: 251 VREGDI 268
VREGDI
Sbjct: 105 VREGDI 110
>gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indica Group]
Length = 101
Score = 100 bits (250), Expect = 2e-19
Identities = 55/63 (87%), Positives = 56/63 (88%)
Frame = +2
Query: 80 TSRRPRLGDDPRMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVRE 259
TSRR L MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVRE
Sbjct: 27 TSRRLELFAS--MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVRE 84
Query: 260 GDI 268
GDI
Sbjct: 85 GDI 87
>ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831577 [Brachypodium
distachyon]
Length = 554
Score = 100 bits (249), Expect = 3e-19
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = +2
Query: 74 TSTSRRPRLGDDPRMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPV 253
+S+ + P MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+
Sbjct: 476 SSSKQSPSPTAKESMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPI 535
Query: 254 REGDI 268
REGDI
Sbjct: 536 REGDI 540
>gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
Length = 86
Score = 100 bits (249), Expect = 3e-19
Identities = 53/70 (75%), Positives = 57/70 (81%)
Frame = +2
Query: 59 CGKEATSTSRRPRLGDDPRMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRN 238
C + + S P+ MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRN
Sbjct: 7 CSRSSDPPSPTPQ----ESMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRN 62
Query: 239 VKGPVREGDI 268
VKGPVREGDI
Sbjct: 63 VKGPVREGDI 72
>gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu]
Length = 115
Score = 100 bits (248), Expect = 4e-19
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 51 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 101
>tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays]
Length = 68
Score = 100 bits (248), Expect = 4e-19
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 4 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 54
>gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japonica Group]
Length = 93
Score = 100 bits (248), Expect = 4e-19
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 29 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 79
>gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
Length = 65
Score = 100 bits (248), Expect = 4e-19
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group]
gi|226492207|ref|NP_001147283.1| 40S ribosomal protein
S28 [Zea mays] gi|226528567|ref|NP_001147474.1| 40S
ribosomal protein S28 [Zea mays]
gi|226530547|ref|NP_001147106.1| 40S ribosomal protein
S28 [Zea mays] gi|297600386|ref|NP_001049079.2|
Os03g0167100 [Oryza sativa Japonica Group]
gi|242042107|ref|XP_002468448.1| hypothetical protein
SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|514816860|ref|XP_004983165.1| PREDICTED: 40S
ribosomal protein S28-like [Setaria italica]
gi|514821804|ref|XP_004985578.1| PREDICTED: 40S
ribosomal protein S28-like [Setaria italica]
gi|582044877|pdb|3J60|CC Chain c, Localization Of The
Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|113639193|dbj|BAF26498.1| Os10g0411700 [Oryza sativa
Japonica Group] gi|194704454|gb|ACF86311.1| unknown [Zea
mays] gi|195605026|gb|ACG24343.1| 40S ribosomal protein
S28 [Zea mays] gi|195605034|gb|ACG24347.1| 40S ribosomal
protein S28 [Zea mays] gi|195607258|gb|ACG25459.1| 40S
ribosomal protein S28 [Zea mays]
gi|195609472|gb|ACG26566.1| 40S ribosomal protein S28
[Zea mays] gi|195609816|gb|ACG26738.1| 40S ribosomal
protein S28 [Zea mays] gi|195610066|gb|ACG26863.1| 40S
ribosomal protein S28 [Zea mays]
gi|195611640|gb|ACG27650.1| 40S ribosomal protein S28
[Zea mays] gi|195618106|gb|ACG30883.1| 40S ribosomal
protein S28 [Zea mays] gi|195618338|gb|ACG30999.1| 40S
ribosomal protein S28 [Zea mays]
gi|195618690|gb|ACG31175.1| 40S ribosomal protein S28
[Zea mays] gi|195619662|gb|ACG31661.1| 40S ribosomal
protein S28 [Zea mays] gi|195620148|gb|ACG31904.1| 40S
ribosomal protein S28 [Zea mays]
gi|195655603|gb|ACG47269.1| 40S ribosomal protein S28
[Zea mays] gi|195655989|gb|ACG47462.1| 40S ribosomal
protein S28 [Zea mays] gi|222612816|gb|EEE50948.1|
hypothetical protein OsJ_31495 [Oryza sativa Japonica
Group] gi|241922302|gb|EER95446.1| hypothetical protein
SORBIDRAFT_01g046070 [Sorghum bicolor]
gi|255674234|dbj|BAF10993.2| Os03g0167100 [Oryza sativa
Japonica Group] gi|326509929|dbj|BAJ87180.1| predicted
protein [Hordeum vulgare subsp. vulgare]
gi|326526071|dbj|BAJ93212.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|413956006|gb|AFW88655.1| 40S
ribosomal protein S28 isoform 1 [Zea mays]
gi|413956007|gb|AFW88656.1| 40S ribosomal protein S28
isoform 2 [Zea mays] gi|414865013|tpg|DAA43570.1| TPA:
40S ribosomal protein S28 [Zea mays]
gi|414866364|tpg|DAA44921.1| TPA: 40S ribosomal protein
S28 isoform 1 [Zea mays] gi|414866365|tpg|DAA44922.1|
TPA: 40S ribosomal protein S28 isoform 2 [Zea mays]
gi|414866366|tpg|DAA44923.1| TPA: 40S ribosomal protein
S28 isoform 3 [Zea mays] gi|414866367|tpg|DAA44924.1|
TPA: 40S ribosomal protein S28 isoform 4 [Zea mays]
gi|474386341|gb|EMS64988.1| 40S ribosomal protein S28
[Triticum urartu] gi|475553296|gb|EMT11959.1| 40S
ribosomal protein S28 [Aegilops tauschii]
Length = 65
Score = 100 bits (248), Expect = 4e-19
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51
>ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 115
Score = 99.8 bits (247), Expect = 5e-19
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 51 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 101
>ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
Length = 65
Score = 99.8 bits (247), Expect = 5e-19
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 51
>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
gi|557532022|gb|ESR43205.1| hypothetical protein
CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 99.0 bits (245), Expect = 8e-19
Identities = 50/57 (87%), Positives = 51/57 (89%)
Frame = +2
Query: 98 LGDDPRMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
L RMDSQ+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 44 LASSLRMDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 100
>gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 155
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +2
Query: 113 RMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
RM+SQVK AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 90 RMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 141
>gb|EXB79987.1| Nicotinamide mononucleotide adenylyltransferase 1 [Morus notabilis]
Length = 275
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +2
Query: 113 RMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
RM+SQVK AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 210 RMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 261
>gb|EXB53855.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 86
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +2
Query: 113 RMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
RM+SQVK AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 21 RMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 72
>emb|CAA04565.1| rpS28 [Hordeum vulgare subsp. vulgare]
Length = 65
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLD QNRLIMRNVKGPVREGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDHQNRLIMRNVKGPVREGDI 51
>ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays]
gi|1173237|sp|P46302.1|RS28_MAIZE RecName: Full=40S
ribosomal protein S28 gi|557682|emb|CAA57636.1| small
subunit ribosomal protein S28 [Zea mays]
Length = 65
Score = 97.1 bits (240), Expect = 3e-18
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2
Query: 116 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 268
MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPV EGDI
Sbjct: 1 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVCEGDI 51