BLASTX nr result
ID: Akebia24_contig00016887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00016887
(730 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 197 7e-83
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 198 1e-82
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 194 3e-82
emb|CBI28035.3| unnamed protein product [Vitis vinifera] 193 1e-81
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 191 2e-81
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 191 3e-81
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A... 184 1e-80
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 185 3e-80
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 181 2e-78
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ... 177 8e-78
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat... 177 8e-78
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr... 176 1e-77
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps... 177 1e-77
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 180 4e-77
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun... 180 9e-77
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 179 9e-77
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 179 3e-76
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ... 179 3e-76
gb|AFK38034.1| unknown [Lotus japonicus] 178 6e-76
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I... 175 7e-76
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 197 bits (501), Expect(2) = 7e-83
Identities = 94/112 (83%), Positives = 105/112 (93%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY +GDFE+NMT+ F+SKFG+N+KREDLVIN+ KR D SDQIYVFFPEEQKV
Sbjct: 19 MQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EIS+KFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAE 130
Score = 137 bits (345), Expect(2) = 7e-83
Identities = 65/71 (91%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT+EEKKTLLERYT+KETQLPRIQ++DPIARY+GLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRY+TYRYVV
Sbjct: 196 AGRYITYRYVV 206
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 198 bits (503), Expect(2) = 1e-82
Identities = 93/112 (83%), Positives = 106/112 (94%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY +GDFE+ MT+A F+SK+G+N+KREDLVIN+TKR D+SDQIYVFFP+E KV
Sbjct: 19 MQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRNDNSDQIYVFFPDEAKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRMKSENVFRA+LVVQQNLTPFARTCI+EISSKFHLEVFQ S+
Sbjct: 79 GVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHLEVFQESE 130
Score = 135 bits (340), Expect(2) = 1e-82
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEH LVPEHQVLT EEKKTLL+RYT+KETQLPRIQ++DPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 194 bits (492), Expect(2) = 3e-82
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY +GDFE+ MTR F SK+G+N+KREDLVIN+TKR D SDQIYVFFPEE KV
Sbjct: 19 MQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSDQIYVFFPEEAKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EIS+KFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAE 130
Score = 139 bits (349), Expect(2) = 3e-82
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVL+ EEKKTLLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYV+
Sbjct: 196 AGRYVTYRYVI 206
>emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 193 bits (491), Expect(2) = 1e-81
Identities = 92/110 (83%), Positives = 103/110 (93%)
Frame = +3
Query: 9 MLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKVGV 188
MLKDRGY +GDFE+NMT+ F+SKFG+N+KREDLVIN+ KR D SDQIYVFFPEEQKVGV
Sbjct: 1 MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGV 60
Query: 189 KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EIS+KFHLEVFQ ++
Sbjct: 61 KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAE 110
Score = 137 bits (345), Expect(2) = 1e-81
Identities = 65/71 (91%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT+EEKKTLLERYT+KETQLPRIQ++DPIARY+GLKRGQVVKIIRPSET
Sbjct: 116 KEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVVKIIRPSET 175
Query: 515 AGRYVTYRYVV 547
AGRY+TYRYVV
Sbjct: 176 AGRYITYRYVV 186
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 191 bits (484), Expect(2) = 2e-81
Identities = 89/112 (79%), Positives = 103/112 (91%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DRGY +GDFE+NM++ F++KFG+N+KREDLVIN+ R D SDQIYVFFP+EQKV
Sbjct: 19 MQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRNDSSDQIYVFFPDEQKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI EIS+KFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHLEVFQEAE 130
Score = 139 bits (349), Expect(2) = 2e-81
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT EEKKTLL+RYT+KETQLPRIQ+TDPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 191 bits (486), Expect(2) = 3e-81
Identities = 91/112 (81%), Positives = 101/112 (90%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDR YL+GDFE+NMTR F SK+G+N+KREDL IN+TKR D SDQIYVFFPEE KV
Sbjct: 19 MQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDSSDQIYVFFPEEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRMKSENV RA+LV QQNLTPFA+TCISEISSKFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLEVFQEAE 130
Score = 137 bits (346), Expect(2) = 3e-81
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEH VLTTEEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRY+TYRYV+
Sbjct: 196 AGRYITYRYVI 206
>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
gi|548863022|gb|ERN20377.1| hypothetical protein
AMTR_s00068p00034280 [Amborella trichopoda]
Length = 206
Score = 184 bits (468), Expect(2) = 1e-80
Identities = 85/112 (75%), Positives = 102/112 (91%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DRGYL+GDFE+NMT+A F+ KFGD +K++DLVIN+T R + S+QIYVFFPEEQKV
Sbjct: 19 MQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNPSEQIYVFFPEEQKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKT+KTYT RMKSENVFRAILV+QQNLTPFAR C+ EIS+KFHLE+FQ S+
Sbjct: 79 GVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHLEIFQESE 130
Score = 142 bits (358), Expect(2) = 1e-80
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT+EEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 185 bits (470), Expect(2) = 3e-80
Identities = 86/112 (76%), Positives = 102/112 (91%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DR YL+GDFE+NMT+ F +K+G+N+KREDL+IN+++R D DQIYVFFPEEQKV
Sbjct: 19 MQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRNDSPDQIYVFFPEEQKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTY NRMKSENV RA+LVVQQNLTPFARTCISEIS+KFHLEVFQ ++
Sbjct: 79 GVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHLEVFQEAE 130
Score = 140 bits (353), Expect(2) = 3e-80
Identities = 69/76 (90%), Positives = 72/76 (94%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV*LTLE 562
AGRY+TYRYV TLE
Sbjct: 196 AGRYITYRYVGVWTLE 211
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 181 bits (459), Expect(2) = 2e-78
Identities = 84/112 (75%), Positives = 100/112 (89%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY++GDFE++MT+ FL K+G+N+KREDLVIN+ R + SDQIY+FFPEE KV
Sbjct: 19 MQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGLRNNSSDQIYIFFPEEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRMK E V RA+L+VQQNLTPFARTCISEIS+KFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTKFHLEVFQEAE 130
Score = 138 bits (348), Expect(2) = 2e-78
Identities = 68/71 (95%), Positives = 69/71 (97%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQITDPIARYYGLKRG VVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGHVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
Full=DNA-directed RNA polymerases II and IV subunit 5A;
Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
II subunit E; AltName: Full=RNA polymerase I, II and III
24.3 kDa subunit; Short=AtRPB24.3
gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
[Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
II and III 24.3 kDa subunit [Arabidopsis thaliana]
gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana]
gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
NRPB5 [Arabidopsis thaliana]
Length = 205
Score = 177 bits (448), Expect(2) = 8e-78
Identities = 85/112 (75%), Positives = 97/112 (86%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DRGY I D E+ MT+ F+ K GDN+KREDLV + KR D+SDQ+Y+FFP+E KV
Sbjct: 18 MQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKV 77
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMK YTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQ ++
Sbjct: 78 GVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAE 129
Score = 140 bits (354), Expect(2) = 8e-78
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLTTEEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKRGQVVKIIRPSET
Sbjct: 135 KEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSET 194
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 195 AGRYVTYRYVV 205
>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
lyrata subsp. lyrata]
Length = 205
Score = 177 bits (448), Expect(2) = 8e-78
Identities = 85/112 (75%), Positives = 97/112 (86%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY I D E+ MT+ F+ K GDN+KREDLV + KR D+SDQ+Y+FFP+E KV
Sbjct: 18 MQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRNDNSDQLYIFFPDEAKV 77
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMK YTNRMKSENV+RAILVVQQNLTPFARTCISEISSKFHLEVFQ ++
Sbjct: 78 GVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAE 129
Score = 140 bits (354), Expect(2) = 8e-78
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLTTEEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKRGQVVKIIRPSET
Sbjct: 135 KEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSET 194
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 195 AGRYVTYRYVV 205
>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
gi|557107329|gb|ESQ47636.1| hypothetical protein
EUTSA_v10021534mg [Eutrema salsugineum]
Length = 206
Score = 176 bits (447), Expect(2) = 1e-77
Identities = 85/112 (75%), Positives = 96/112 (85%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY I D E+ MT F+ K GDN+KREDLV + KR D++DQ+Y+FFP+E KV
Sbjct: 19 MQMLKDRGYFIADSEITMTLGQFIRKHGDNMKREDLVTLKAKRNDNNDQLYIFFPDEAKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMK YTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQ ++
Sbjct: 79 GVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAE 130
Score = 140 bits (354), Expect(2) = 1e-77
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLTTEEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
gi|482567281|gb|EOA31470.1| hypothetical protein
CARUB_v10014656mg [Capsella rubella]
Length = 205
Score = 177 bits (450), Expect(2) = 1e-77
Identities = 84/112 (75%), Positives = 98/112 (87%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDRGY I D E+ +T+ F+ K+GDN+KREDLV + KR D+SDQ+Y+FFP+E KV
Sbjct: 18 MQMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKV 77
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMK YTNRMKSENV+RAILVVQQNLTPFARTCISEISSKFHLEVFQ ++
Sbjct: 78 GVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAE 129
Score = 139 bits (350), Expect(2) = 1e-77
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT+EEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKRGQVVKIIRPSET
Sbjct: 135 KEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSET 194
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 195 AGRYVTYRYVV 205
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 180 bits (457), Expect(2) = 4e-77
Identities = 84/112 (75%), Positives = 100/112 (89%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
M+ML DRGYL+GDFE+NM++ FL K+G+N+KREDLVI + KR + SDQIYVFFPEE KV
Sbjct: 19 MEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNNSSDQIYVFFPEEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYT RMK E+VF+AIL+VQQNLTPFARTCISEIS+KFHLEVFQ ++
Sbjct: 79 GVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHLEVFQEAE 130
Score = 135 bits (339), Expect(2) = 4e-77
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
K HVL+PEHQ+L+ EEKKTLLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRY+TYRYVV
Sbjct: 196 AGRYITYRYVV 206
>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
gi|462416214|gb|EMJ20951.1| hypothetical protein
PRUPE_ppa024345mg [Prunus persica]
Length = 206
Score = 180 bits (457), Expect(2) = 9e-77
Identities = 84/109 (77%), Positives = 98/109 (89%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DR YL+GDFE+NMTR F +K+G+N+KREDL IN+TKR D +DQ+YVFFPEE KV
Sbjct: 19 MQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRNDSTDQLYVFFPEEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQ 329
GVKT+KTYTNRMKS+NV RAILV QQN+TP ARTCISEISSKFH+EVFQ
Sbjct: 79 GVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSKFHMEVFQ 127
Score = 134 bits (336), Expect(2) = 9e-77
Identities = 62/70 (88%), Positives = 69/70 (98%)
Frame = +2
Query: 338 EHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETA 517
EHVLVPEHQ+LT EEKKTLLERYT+KETQLPRIQ+TDP+A+YYGLKRGQV+KIIRPSETA
Sbjct: 137 EHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQLTDPVAKYYGLKRGQVMKIIRPSETA 196
Query: 518 GRYVTYRYVV 547
GRY+TYRYVV
Sbjct: 197 GRYITYRYVV 206
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 179 bits (454), Expect(2) = 9e-77
Identities = 83/112 (74%), Positives = 100/112 (89%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
M+ML DRGYL+GDFE+NM++ +FL K+G+N+KREDLV+ + KR + SDQIYVFFPEE KV
Sbjct: 19 MEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNNSSDQIYVFFPEEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYT RMK E+VF+AIL+VQQNLTPFARTCISEIS KFHLEVFQ ++
Sbjct: 79 GVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFHLEVFQEAE 130
Score = 135 bits (339), Expect(2) = 9e-77
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
K HVL+P+HQ LT EEKKTLLERYT+KETQLPRIQITDPIARYYGLKRGQVVKIIRPSET
Sbjct: 136 KNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYRYVV
Sbjct: 196 AGRYVTYRYVV 206
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 179 bits (454), Expect(2) = 3e-76
Identities = 83/112 (74%), Positives = 102/112 (91%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DRG+L+GDFE+NM++ +F SK+G+++KREDLVIN++K+ + DQIYVFFP+E KV
Sbjct: 19 MQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRM SENV+RAILV Q NLTPFARTCISEISSKFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAE 130
Score = 133 bits (335), Expect(2) = 3e-76
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEH LVPEHQVLT EKKTLLERYT+KETQLPRIQ+TDP+ARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYR+VV
Sbjct: 196 AGRYVTYRFVV 206
>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|355511987|gb|AES93610.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC1 [Medicago truncatula]
Length = 410
Score = 179 bits (453), Expect(2) = 3e-76
Identities = 84/112 (75%), Positives = 100/112 (89%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQMLKDR YL+GDFE+NM++ DF K+G+N+KREDLVIN+TK+ SDQIYVFFPEE KV
Sbjct: 223 MQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKTKKDKPSDQIYVFFPEEAKV 282
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRM SENV+RAILV Q +LTPFA+TC+SEI+SKFHLEVFQ ++
Sbjct: 283 GVKTMKTYTNRMNSENVYRAILVCQTSLTPFAKTCVSEIASKFHLEVFQEAE 334
Score = 133 bits (335), Expect(2) = 3e-76
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQ+L EKKTLLERYT+KETQLPRIQ+TDP+ARYYGLKRGQVVKIIRPSET
Sbjct: 340 KEHVLVPEHQILNDTEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 399
Query: 515 AGRYVTYRYVV 547
AGRYVTYR+VV
Sbjct: 400 AGRYVTYRFVV 410
>gb|AFK38034.1| unknown [Lotus japonicus]
Length = 206
Score = 178 bits (451), Expect(2) = 6e-76
Identities = 84/112 (75%), Positives = 99/112 (88%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
MQML+DR YL+GDFE+NM+R +F +K+GDN+KREDL IN+TK+ SDQIYVFFP+E KV
Sbjct: 19 MQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTKKDGPSDQIYVFFPDEPKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRM SENVFRAILV Q NLTPFA+TCISE+SSKF LEVFQ ++
Sbjct: 79 GVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSKFQLEVFQEAE 130
Score = 133 bits (335), Expect(2) = 6e-76
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQ+L EKKTLLERYT+KETQLPRIQITDP+ARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRY+TYR+VV
Sbjct: 196 AGRYITYRFVV 206
>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 206
Score = 175 bits (444), Expect(2) = 7e-76
Identities = 83/112 (74%), Positives = 99/112 (88%)
Frame = +3
Query: 3 MQMLKDRGYLIGDFEVNMTRADFLSKFGDNLKREDLVINRTKRGDDSDQIYVFFPEEQKV 182
M ML+DR YL+GDFEVNM++ +F K+G+N+KREDLVIN+TK+ SDQIYVFFPEE KV
Sbjct: 19 MVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTKKDKPSDQIYVFFPEEVKV 78
Query: 183 GVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQXSK 338
GVKTMKTYTNRM SENV+RAILV Q +LTPFARTCI+E+SSKFHLEVFQ ++
Sbjct: 79 GVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVSSKFHLEVFQEAE 130
Score = 135 bits (341), Expect(2) = 7e-76
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = +2
Query: 335 KEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRGQVVKIIRPSET 514
KEHVLVPEHQVLT EKKTLLERYT+KETQLPRIQ+TDP+ARYYGLKRGQVVKIIRPSET
Sbjct: 136 KEHVLVPEHQVLTETEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSET 195
Query: 515 AGRYVTYRYVV 547
AGRYVTYR+VV
Sbjct: 196 AGRYVTYRFVV 206