BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00016645
         (1070 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007208752.1| hypothetical protein PRUPE_ppa015993mg [Prun...   441   e-121
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              434   e-119
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...   434   e-119
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   432   e-118
gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]     425   e-116
ref|XP_007207181.1| hypothetical protein PRUPE_ppa017156mg [Prun...   419   e-114
ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citr...   415   e-113
ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,...   402   e-109
ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutr...   397   e-108
ref|XP_007016541.1| Tetratricopeptide repeat-like superfamily pr...   396   e-108
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar...   396   e-108
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ...   395   e-107
ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, part...   392   e-106
ref|XP_002303899.2| pentatricopeptide repeat-containing family p...   383   e-104
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...   381   e-103
ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   375   e-101
ref|XP_007132119.1| hypothetical protein PHAVU_011G068200g [Phas...   374   e-101
ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-100

>ref|XP_007208752.1| hypothetical protein PRUPE_ppa015993mg [Prunus persica]
            gi|462404394|gb|EMJ09951.1| hypothetical protein
            PRUPE_ppa015993mg [Prunus persica]
          Length = 714

 Score =  441 bits (1133), Expect = e-121
 Identities = 208/337 (61%), Positives = 276/337 (81%), Gaps = 2/337 (0%)
 Frame = +1

Query: 64   RTKAIHQTRTRIAHH--SPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITD 237
            R +AI+Q +  +  H  +P Q   Q Y TFR  +P+ K   ER  + + K++RPIPF++D
Sbjct: 5    RARAINQAQANLLRHCSNPIQAQ-QPYHTFRPNKPKTKPRRERLHRDTTKLRRPIPFVSD 63

Query: 238  LKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQ 417
            +KEVE+P+  L LF EY  +GFKHDYPSYSAL+YKLARSR+F AVET+L ++++ NI C+
Sbjct: 64   VKEVEDPEEGLSLFYEYHQMGFKHDYPSYSALLYKLARSRNFEAVETILGHVRDRNIHCK 123

Query: 418  DSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFN 597
            D+LFIA+IQHYGK+NL +KAI+LFN++PSFNC RTLQ+FN LL+VLV++GR  +A +IF 
Sbjct: 124  DTLFIALIQHYGKANLVEKAIELFNQMPSFNCVRTLQAFNALLNVLVDSGRFVEADEIFG 183

Query: 598  RSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNG 777
            R SKMG RPNS+S+NI++KG +Q+ + EEAC VF+ MLE+++QP+VVTYNSLIGF  + G
Sbjct: 184  RCSKMGLRPNSISYNIMMKGWLQKGDGEEACKVFDEMLEKKVQPSVVTYNSLIGFFGRKG 243

Query: 778  NLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFG 957
             L+KA  LLEDM QK KYPNA+TYALLMEG C +G H+ A+K+MFDMEY+GCKP+L+N+G
Sbjct: 244  ELEKANGLLEDMKQKGKYPNAVTYALLMEGFCMLGKHEEAKKMMFDMEYRGCKPRLLNYG 303

Query: 958  VLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            VLMSDLG++GKI+EA++LL EMKKRRFKPDVV+YNI+
Sbjct: 304  VLMSDLGRRGKIDEAKSLLQEMKKRRFKPDVVLYNIL 340



 Score = 97.8 bits (242), Expect = 7e-18
 Identities = 62/256 (24%), Positives = 123/256 (48%)
 Frame = +1

Query: 274  LFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYG 453
            +F     +G + +  SY+ ++    +  D      + D + E  ++     + ++I  +G
Sbjct: 181  IFGRCSKMGLRPNSISYNIMMKGWLQKGDGEEACKVFDEMLEKKVQPSVVTYNSLIGFFG 240

Query: 454  KSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSV 633
            +    +KA  L   +          ++  L++     G+  +AK +       G +P  +
Sbjct: 241  RKGELEKANGLLEDMKQKGKYPNAVTYALLMEGFCMLGKHEEAKKMMFDMEYRGCKPRLL 300

Query: 634  SFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDM 813
            ++ +++    +R + +EA ++ + M +R  +P VV YN LI FLCK G   +A  +L +M
Sbjct: 301  NYGVLMSDLGRRGKIDEAKSLLQEMKKRRFKPDVVLYNILINFLCKEGRAAEAYKVLIEM 360

Query: 814  TQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKI 993
                  PNA TY ++++G C + + +   K++  M      P+L  F  L++ L K GKI
Sbjct: 361  QVGGCVPNAATYRMMVDGFCQIEDFEGGLKVLIAMLTSRHCPRLETFECLVTGLVKCGKI 420

Query: 994  EEARALLGEMKKRRFK 1041
            ++A  +L EM+KR  +
Sbjct: 421  DDAFVVLEEMEKRNMQ 436


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  434 bits (1115), Expect = e-119
 Identities = 210/346 (60%), Positives = 273/346 (78%)
 Frame = +1

Query: 31   ICSGLTVMILLRTKAIHQTRTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKV 210
            + S    M   RTKAI+ T  R+  H  +    Q Y TFR  RP  ++  E   +++ ++
Sbjct: 390  LSSSAVSMFHSRTKAINHTLPRLFRHFIEYKPSQQYHTFRPRRPTTESRREPPHRSTSRL 449

Query: 211  KRPIPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDY 390
            ++ IPF+ DLK V++PD AL LF +YQ +GFKHDYPSYSAL+YKLARSR+F AVETLLDY
Sbjct: 450  RKRIPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDY 509

Query: 391  IKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGR 570
            ++  NIRC+++LFIA+IQHYGKS + +KA++LF R+PSFNC RTL SFN LL+VLVE  R
Sbjct: 510  LQNINIRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDR 569

Query: 571  LNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNS 750
              DA  IF+RS+KMGFR NS+SFNIIIKG + + EW++A  VFE M+++E++PTVVT+NS
Sbjct: 570  FLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNS 629

Query: 751  LIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQG 930
            LIGFLC  G+LD AM LLEDM QKR  PNA+TYALLMEGLCS+G +  A+K+MFDM+YQG
Sbjct: 630  LIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQG 689

Query: 931  CKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            CKP+L+NFGVLMSDLG++G+I++++ LL EMK+RRFKPDVV YNI+
Sbjct: 690  CKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNIL 735



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 78/319 (24%), Positives = 147/319 (46%), Gaps = 4/319 (1%)
 Frame = +1

Query: 97   IAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEVENPD---SA 267
            I H+   Q   ++ + F+  R  + NCH             + F T L  +   D    A
Sbjct: 526  IQHYGKSQMPEKAVELFQ--RMPSFNCHRTL----------VSFNTLLNVLVENDRFLDA 573

Query: 268  LRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQH 447
            + +F+    +GF+ +  S++ +I       +++    + + + +  ++     F ++I  
Sbjct: 574  IGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGF 633

Query: 448  Y-GKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRP 624
              GK +L D A+ L   +          ++  L++ L   G+  +AK +       G +P
Sbjct: 634  LCGKGDL-DGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 692

Query: 625  NSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLL 804
              ++F +++    +R   +++  +   M  R  +P VVTYN LI  LCK G   +A  +L
Sbjct: 693  RLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVL 752

Query: 805  EDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKK 984
             +M      PNA TY ++++G C V + +   K++  M   G  P+L +F  L+  L K 
Sbjct: 753  VEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKN 812

Query: 985  GKIEEARALLGEMKKRRFK 1041
            GKI+ A  +L EM+KR+ +
Sbjct: 813  GKIDGACFVLEEMEKRKMR 831


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
            mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  434 bits (1115), Expect = e-119
 Identities = 210/346 (60%), Positives = 273/346 (78%)
 Frame = +1

Query: 31   ICSGLTVMILLRTKAIHQTRTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKV 210
            + S    M   RTKAI+ T  R+  H  +    Q Y TFR  RP  ++  E   +++ ++
Sbjct: 28   LSSSAVSMFHSRTKAINHTLPRLFRHFIEYKPSQQYHTFRPRRPTTESRREPPHRSTSRL 87

Query: 211  KRPIPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDY 390
            ++ IPF+ DLK V++PD AL LF +YQ +GFKHDYPSYSAL+YKLARSR+F AVETLLDY
Sbjct: 88   RKRIPFLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDY 147

Query: 391  IKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGR 570
            ++  NIRC+++LFIA+IQHYGKS + +KA++LF R+PSFNC RTL SFN LL+VLVE  R
Sbjct: 148  LQNINIRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDR 207

Query: 571  LNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNS 750
              DA  IF+RS+KMGFR NS+SFNIIIKG + + EW++A  VFE M+++E++PTVVT+NS
Sbjct: 208  FLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNS 267

Query: 751  LIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQG 930
            LIGFLC  G+LD AM LLEDM QKR  PNA+TYALLMEGLCS+G +  A+K+MFDM+YQG
Sbjct: 268  LIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQG 327

Query: 931  CKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            CKP+L+NFGVLMSDLG++G+I++++ LL EMK+RRFKPDVV YNI+
Sbjct: 328  CKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNIL 373



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 78/319 (24%), Positives = 147/319 (46%), Gaps = 4/319 (1%)
 Frame = +1

Query: 97   IAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEVENPD---SA 267
            I H+   Q   ++ + F+  R  + NCH             + F T L  +   D    A
Sbjct: 164  IQHYGKSQMPEKAVELFQ--RMPSFNCHRTL----------VSFNTLLNVLVENDRFLDA 211

Query: 268  LRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQH 447
            + +F+    +GF+ +  S++ +I       +++    + + + +  ++     F ++I  
Sbjct: 212  IGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGF 271

Query: 448  Y-GKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRP 624
              GK +L D A+ L   +          ++  L++ L   G+  +AK +       G +P
Sbjct: 272  LCGKGDL-DGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 330

Query: 625  NSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLL 804
              ++F +++    +R   +++  +   M  R  +P VVTYN LI  LCK G   +A  +L
Sbjct: 331  RLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVL 390

Query: 805  EDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKK 984
             +M      PNA TY ++++G C V + +   K++  M   G  P+L +F  L+  L K 
Sbjct: 391  VEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKN 450

Query: 985  GKIEEARALLGEMKKRRFK 1041
            GKI+ A  +L EM+KR+ +
Sbjct: 451  GKIDGACFVLEEMEKRKMR 469


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  432 bits (1110), Expect = e-118
 Identities = 207/335 (61%), Positives = 269/335 (80%)
 Frame = +1

Query: 64   RTKAIHQTRTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLK 243
            RTKAI+ T  R+  H  +    Q Y TFR  RP  ++  E   +++ ++++ IPF+ DLK
Sbjct: 330  RTKAINHTLXRLFRHFIEYKPSQQYHTFRPKRPTTESRREPPHRSTSRLRKRIPFLADLK 389

Query: 244  EVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDS 423
             V++PD AL LF +YQ +GFKHDYPSYSAL+YKLARSR+F AVETLLDY++  NIRC+++
Sbjct: 390  SVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRET 449

Query: 424  LFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRS 603
            LFIA+IQHYGKS + +KAI+LF R+PSFNC RT+ SFN LL+VLVE  R  DA  IF+RS
Sbjct: 450  LFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRS 509

Query: 604  SKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNL 783
            +KMGFR NS+SFNIIIKG + + EW++A  VFE M+++E++PTVVT+NSLIGFLC  G+L
Sbjct: 510  TKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDL 569

Query: 784  DKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVL 963
            D AM LL+DM QKR  PNA+TYALLMEGLCS+G +  A+K+MFDM+YQGCKP+L+NFGVL
Sbjct: 570  DGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVL 629

Query: 964  MSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            MSDLG++G+I++ + LL EMK+RRFKPDVV YNI+
Sbjct: 630  MSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNIL 664



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 76/316 (24%), Positives = 146/316 (46%), Gaps = 1/316 (0%)
 Frame = +1

Query: 97   IAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEVENPDSALRL 276
            I H+   Q   ++ + F+  R  + NCH      +         +  L E++    A+ +
Sbjct: 455  IQHYGKSQMPEKAIELFQ--RMPSFNCHRTIVSFNT-------LLNVLVEIDRFLDAIGI 505

Query: 277  FEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHY-G 453
            F+    +GF+ +  S++ +I       +++    + + + +  ++     F ++I    G
Sbjct: 506  FDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCG 565

Query: 454  KSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSV 633
            K +L D A+ L   +          ++  L++ L   G+  +AK +       G +P  +
Sbjct: 566  KGDL-DGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLL 624

Query: 634  SFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDM 813
            +F +++    +R   ++   +   M  R  +P VVTYN LI  LCK G   +A  +L +M
Sbjct: 625  NFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEM 684

Query: 814  TQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKI 993
                  PNA TY ++++G C V + +   K++  M   G  P+L +F  L+  L K GKI
Sbjct: 685  QVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKI 744

Query: 994  EEARALLGEMKKRRFK 1041
            + A  +L EM+KR+ +
Sbjct: 745  DGACFVLEEMEKRKMR 760


>gb|EXC35073.1| hypothetical protein L484_010855 [Morus notabilis]
          Length = 461

 Score =  425 bits (1093), Expect = e-116
 Identities = 208/346 (60%), Positives = 271/346 (78%), Gaps = 7/346 (2%)
 Frame = +1

Query: 52   MILLRTKAIHQTRTR------IAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVK 213
            MI   TKAI QT++       + +    QP++             K  HER+ KA+ +++
Sbjct: 1    MIHSGTKAIKQTQSNFVLVRCLINVVRSQPYY------------TKPSHERSHKATTELR 48

Query: 214  RPIPFITDLKEVENPDSALRLFEEYQL-LGFKHDYPSYSALIYKLARSRDFNAVETLLDY 390
            +P PF++++K+ ++P+ AL LF++YQ  +GFKHDY SYSALIYKLAR RDF AVET+LD+
Sbjct: 49   KPTPFVSNVKQAQDPEEALSLFQDYQQNIGFKHDYASYSALIYKLARFRDFEAVETILDH 108

Query: 391  IKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGR 570
            +++ NIRC + +FI ++QHYGK+NL DKAI+LF RIPSFNC RTLQS N LL+VLV+ GR
Sbjct: 109  VQDRNIRCGEKVFIVLMQHYGKANLVDKAIELFRRIPSFNCVRTLQSLNALLNVLVDGGR 168

Query: 571  LNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNS 750
             ++A D+F RS KMGFRPNS++FNIIIKG +++ +WEEA  VF+ MLER +QP+VVTYNS
Sbjct: 169  FSEANDVFYRSYKMGFRPNSITFNIIIKGCLRKGDWEEASKVFDEMLERSVQPSVVTYNS 228

Query: 751  LIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQG 930
            LIG+LCK G LDKA  LLEDM +K K PNA+TYAL+MEGLCSVG +  A+K+MFDMEY+G
Sbjct: 229  LIGYLCKKGELDKAKGLLEDMIEKGKCPNAVTYALMMEGLCSVGKYKEAKKLMFDMEYRG 288

Query: 931  CKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            CKPKLVNFG+LM+DLG++G IEEA+ LL EMK+RRFKPDVVIYNI+
Sbjct: 289  CKPKLVNFGILMTDLGRRGNIEEAKLLLNEMKRRRFKPDVVIYNIL 334



 Score =  101 bits (252), Expect = 5e-19
 Identities = 69/253 (27%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
 Frame = +1

Query: 295  LGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDK 474
            +GF+ +  +++ +I    R  D+     + D + E +++     + ++I +  K    DK
Sbjct: 182  MGFRPNSITFNIIIKGCLRKGDWEEASKVFDEMLERSVQPSVVTYNSLIGYLCKKGELDK 241

Query: 475  AIDLF-NRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIII 651
            A  L  + I    C   + ++  +++ L   G+  +AK +       G +P  V+F I++
Sbjct: 242  AKGLLEDMIEKGKCPNAV-TYALMMEGLCSVGKYKEAKKLMFDMEYRGCKPKLVNFGILM 300

Query: 652  KGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKY 831
                +R   EEA  +   M  R  +P VV YN LI +LC+ G    A  +L +M      
Sbjct: 301  TDLGRRGNIEEAKLLLNEMKRRRFKPDVVIYNILINYLCREGKAVAAHKILTEMQIGGCE 360

Query: 832  PNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARAL 1011
            PNA TY ++++G C VG+ +   K++  M      P+L +F  L+  L K G +E+A  +
Sbjct: 361  PNAATYRVMVDGFCQVGDFERGLKVLNAMLTSRHCPRLESFRCLIMGLVKCGNLEDACFV 420

Query: 1012 LGEMKKRRFKPDV 1050
            L EM KR+ + D+
Sbjct: 421  LEEMGKRKMQFDL 433



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 61/262 (23%), Positives = 121/262 (46%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            D A+ LF             S +AL+  L     F+    +     +   R     F  +
Sbjct: 135  DKAIELFRRIPSFNCVRTLQSLNALLNVLVDGGRFSEANDVFYRSYKMGFRPNSITFNII 194

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I+   +    ++A  +F+ +   +   ++ ++N L+  L + G L+ AK +     + G 
Sbjct: 195  IKGCLRKGDWEEASKVFDEMLERSVQPSVVTYNSLIGYLCKKGELDKAKGLLEDMIEKGK 254

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
             PN+V++ ++++G     +++EA  +   M  R  +P +V +  L+  L + GN+++A  
Sbjct: 255  CPNAVTYALMMEGLCSVGKYKEAKKLMFDMEYRGCKPKLVNFGILMTDLGRRGNIEEAKL 314

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
            LL +M ++R  P+ + Y +L+  LC  G   +A KI+ +M+  GC+P    + V++    
Sbjct: 315  LLNEMKRRRFKPDVVIYNILINYLCREGKAVAAHKILTEMQIGGCEPNAATYRVMVDGFC 374

Query: 979  KKGKIEEARALLGEMKKRRFKP 1044
            + G  E    +L  M   R  P
Sbjct: 375  QVGDFERGLKVLNAMLTSRHCP 396


>ref|XP_007207181.1| hypothetical protein PRUPE_ppa017156mg [Prunus persica]
            gi|462402823|gb|EMJ08380.1| hypothetical protein
            PRUPE_ppa017156mg [Prunus persica]
          Length = 727

 Score =  419 bits (1076), Expect = e-114
 Identities = 206/349 (59%), Positives = 269/349 (77%), Gaps = 14/349 (4%)
 Frame = +1

Query: 64   RTKAIHQTRTRIAHHSPKQPHFQS-YQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDL 240
            R +AI+Q +  +  H     H Q  Y TFR  +P+ K   ER  + + K++RPIPF++D+
Sbjct: 5    RARAINQAQANLLRHCSNPIHAQQPYHTFRPNKPKTKPHRERLHRDTTKLRRPIPFVSDV 64

Query: 241  KEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLD-------YIKE 399
            KEVE+P+ AL LF EY  +GFKHDYPSYSAL+YKLARSR+F A E +L           E
Sbjct: 65   KEVEDPEEALSLFYEYHQMGFKHDYPSYSALLYKLARSRNFEAGENILGREWSRRLQSFE 124

Query: 400  NNIRCQ------DSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVE 561
            N   C+      D+LFIA+IQHYGK+NL +KAI+LFN++PSFNC RTLQ+FN LL+VLV+
Sbjct: 125  NERACREEQSKKDTLFIALIQHYGKANLVEKAIELFNQMPSFNCVRTLQAFNALLNVLVD 184

Query: 562  AGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVT 741
            +GR  +A +IF R SKMGFRPNS+S+NI++KG +Q+ + EEAC VF+ MLE+++QP+VVT
Sbjct: 185  SGRFVEADEIFGRCSKMGFRPNSISYNIMMKGWLQKGDGEEACKVFDEMLEKKVQPSVVT 244

Query: 742  YNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDME 921
            YNSLIGF  + G L+KA  LLEDM QK KYPNA+TYALLMEG C +G HD A+K+MFDME
Sbjct: 245  YNSLIGFFGRKGELEKANGLLEDMKQKGKYPNAVTYALLMEGFCMLGKHDEAKKMMFDME 304

Query: 922  YQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            Y+GCKP+L+N+GVL+SDLG++GKI+EA++LL EMKKR FKPDVV+YNI+
Sbjct: 305  YRGCKPRLLNYGVLISDLGRRGKIDEAKSLLQEMKKRLFKPDVVLYNIL 353



 Score =  100 bits (250), Expect = 8e-19
 Identities = 64/256 (25%), Positives = 125/256 (48%)
 Frame = +1

Query: 274  LFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYG 453
            +F     +GF+ +  SY+ ++    +  D      + D + E  ++     + ++I  +G
Sbjct: 194  IFGRCSKMGFRPNSISYNIMMKGWLQKGDGEEACKVFDEMLEKKVQPSVVTYNSLIGFFG 253

Query: 454  KSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSV 633
            +    +KA  L   +          ++  L++     G+ ++AK +       G +P  +
Sbjct: 254  RKGELEKANGLLEDMKQKGKYPNAVTYALLMEGFCMLGKHDEAKKMMFDMEYRGCKPRLL 313

Query: 634  SFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDM 813
            ++ ++I    +R + +EA ++ + M +R  +P VV YN LI FLCK G   +A  +L +M
Sbjct: 314  NYGVLISDLGRRGKIDEAKSLLQEMKKRLFKPDVVLYNILINFLCKEGRAAEAYKVLIEM 373

Query: 814  TQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKI 993
                  PNA TY ++++G C + + +   K++  M      P+L  F  L++ L K GKI
Sbjct: 374  QVGGCVPNAATYRMMVDGFCQIDDFEGGLKVLIAMLTSRHCPRLETFECLVTGLVKCGKI 433

Query: 994  EEARALLGEMKKRRFK 1041
            ++A  +L EM+KR  +
Sbjct: 434  DDACVVLEEMEKRNMQ 449


>ref|XP_006424739.1| hypothetical protein CICLE_v10030177mg [Citrus clementina]
            gi|557526673|gb|ESR37979.1| hypothetical protein
            CICLE_v10030177mg [Citrus clementina]
          Length = 797

 Score =  415 bits (1067), Expect = e-113
 Identities = 203/348 (58%), Positives = 268/348 (77%), Gaps = 9/348 (2%)
 Frame = +1

Query: 52   MILLRTKAIHQTRTRIAHHSPKQPHFQSYQ--TFRSTRPRNKNCHERAPKASP------- 204
            MI  R+K I+QT+  + H      +  S Q  TF   +P+ K   +   K +P       
Sbjct: 1    MIHSRSKVINQTKLVLLHQRQCINYIPSQQKHTFTPKKPKPKPSTKPRRKQNPQNHKTIR 60

Query: 205  KVKRPIPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLL 384
            K K PIPF+ DLKE+ +PD AL LF  +  +G KH YPSY++LIYKLAR+RDF+AVET+L
Sbjct: 61   KTKEPIPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVL 120

Query: 385  DYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEA 564
             YI++ NIRC+++LFI++IQHYGK++L DKAI++FNR+ SF+C RTLQSFN LLD+LV+ 
Sbjct: 121  GYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDN 180

Query: 565  GRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTY 744
             R++DAK +F+ + KMGFRPN +SFN++IKG +++ EWEEA  VF+ MLERE+ PTVVTY
Sbjct: 181  DRVDDAKRMFDDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTY 240

Query: 745  NSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEY 924
            NSL+GFLC+ G ++KA  L EDM +K  YPNA+TYALLMEGLC  G ++ A+K+MFDM Y
Sbjct: 241  NSLVGFLCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAY 300

Query: 925  QGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            +GCKP+LVNFGVLMSDLGK+GKIEEA++LL EMKKR++KPDVV YNI+
Sbjct: 301  RGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNIL 348



 Score =  105 bits (261), Expect = 4e-20
 Identities = 69/271 (25%), Positives = 133/271 (49%)
 Frame = +1

Query: 238  LKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQ 417
            L + +  D A R+F++   +GF+ +  S++ +I    +  ++     + D + E  +   
Sbjct: 177  LVDNDRVDDAKRMFDDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPT 236

Query: 418  DSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFN 597
               + +++    +    +KA  LF  +          ++  L++ L   G  N+AK +  
Sbjct: 237  VVTYNSLVGFLCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 296

Query: 598  RSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNG 777
              +  G +P  V+F +++    +R + EEA ++   M +R+ +P VVTYN LI +LCK  
Sbjct: 297  DMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKED 356

Query: 778  NLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFG 957
                A  +L +M      PNA TY  +++G   V + + + K++  M      P+L  F 
Sbjct: 357  RAAGAYKVLTEMQIGGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFS 416

Query: 958  VLMSDLGKKGKIEEARALLGEMKKRRFKPDV 1050
             L+  L K GK+++A  +L EM+KR+ + D+
Sbjct: 417  CLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 447


>ref|XP_006488245.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
            mitochondrial-like [Citrus sinensis]
          Length = 477

 Score =  414 bits (1065), Expect = e-113
 Identities = 203/348 (58%), Positives = 268/348 (77%), Gaps = 9/348 (2%)
 Frame = +1

Query: 52   MILLRTKAIHQTRTRIAHHSPKQPHFQSYQ--TFRSTRPRNKNCHERAPKASP------- 204
            MI  R+K I+QT+  + H      +  S Q  TF   +P+ K   +   K +P       
Sbjct: 3    MIHSRSKFINQTKLVLLHQRQCINYIPSQQKHTFTPKKPKPKPSTKPRRKQNPQNHKTIR 62

Query: 205  KVKRPIPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLL 384
            K K PIPF+ DLKE+ +PD AL LF  +  +G KH YPSY++LIYKLAR+RDF+AVET+L
Sbjct: 63   KTKEPIPFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVL 122

Query: 385  DYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEA 564
             YI++ NIRC+++LFI++IQHYGK++L DKAI++FNR+ SF+C RTLQSFN LLD+LV+ 
Sbjct: 123  GYIQDFNIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDN 182

Query: 565  GRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTY 744
             R++DAK +F+ + KMGFRPN +SFN++IKG +++ EWEEA  VF+ MLERE+ PTVVTY
Sbjct: 183  DRVDDAKRMFDDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTY 242

Query: 745  NSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEY 924
            NSL+GFLC+ G ++KA  L EDM +K  YPNA+TYALLMEGLC  G ++ A+K+MFDM Y
Sbjct: 243  NSLVGFLCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAY 302

Query: 925  QGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            +GCKP+LVNFGVLMSDLGK+GKIEEA++LL EMKKR++KPDVV YNI+
Sbjct: 303  RGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNIL 350



 Score =  106 bits (264), Expect = 2e-20
 Identities = 69/271 (25%), Positives = 134/271 (49%)
 Frame = +1

Query: 238  LKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQ 417
            L + +  D A R+F++   +GF+ +  S++ +I    +  ++     + D + E  +   
Sbjct: 179  LVDNDRVDDAKRMFDDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPT 238

Query: 418  DSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFN 597
               + +++    +    +KA  LF  +          ++  L++ L   G  N+AK +  
Sbjct: 239  VVTYNSLVGFLCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMF 298

Query: 598  RSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNG 777
              +  G +P  V+F +++    +R + EEA ++   M +R+ +P VVTYN LI +LCK  
Sbjct: 299  DMAYRGCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKED 358

Query: 778  NLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFG 957
               +A  +L +M      PNA TY  +++G   V + + + K++  M      P+L  F 
Sbjct: 359  RAAEAYKVLTEMQIGGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFS 418

Query: 958  VLMSDLGKKGKIEEARALLGEMKKRRFKPDV 1050
             L+  L K GK+++A  +L EM+KR+ + D+
Sbjct: 419  CLLVGLLKGGKVDDACFVLEEMEKRKMRFDL 449



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 55/245 (22%), Positives = 113/245 (46%), Gaps = 7/245 (2%)
 Frame = +1

Query: 259 DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLL-DYIKENNI--RCQDSLF 429
           + A R+F+E           +Y++L+  L R  +    + L  D IK+         +L 
Sbjct: 221 EEASRVFDEMLEREVPPTVVTYNSLVGFLCRKGEMEKAKGLFEDMIKKGTYPNAVTYALL 280

Query: 430 IAVIQHYGKSNLSDKAI-DLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSS 606
           +  +   G+ N + K + D+  R     C   L +F  L+  L + G++ +AK + +   
Sbjct: 281 MEGLCFKGEYNEAKKMMFDMAYR----GCKPQLVNFGVLMSDLGKRGKIEEAKSLLSEMK 336

Query: 607 KMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREI---QPTVVTYNSLIGFLCKNG 777
           K  ++P+ V++NI+I      C+ + A   ++ + E +I   +P   TY +++    +  
Sbjct: 337 KRQYKPDVVTYNILIN---YLCKEDRAAEAYKVLTEMQIGGCKPNAATYRTMVDGFLRVE 393

Query: 778 NLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFG 957
           + + ++ +L  M   R  P   T++ L+ GL   G  D A  ++ +ME +  +  L  + 
Sbjct: 394 DFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGGKVDDACFVLEEMEKRKMRFDLKAWE 453

Query: 958 VLMSD 972
            L++D
Sbjct: 454 GLVTD 458


>ref|XP_004295952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 468

 Score =  414 bits (1064), Expect = e-113
 Identities = 199/337 (59%), Positives = 266/337 (78%), Gaps = 2/337 (0%)
 Frame = +1

Query: 64   RTKAIHQTRTRIAHHSPKQPHFQSYQTFRS-TRPRNKNCHERAPKASPKV-KRPIPFITD 237
            R KA+HQ ++    H     + Q+Y T R   +P  K   ER  +A+ K+ ++PIPF++D
Sbjct: 5    RVKALHQAQSNPLLHWTNLTNLQTYHTLRRPNKPNTKPRRERPHRAAAKLLRKPIPFVSD 64

Query: 238  LKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQ 417
            +K+   P+ AL LF EY  +GFKHDYPSYSALIYKLAR+R+F A+ET+L ++++ NI C+
Sbjct: 65   VKQTHGPEDALSLFREYHEMGFKHDYPSYSALIYKLARNRNFEAIETILGHVRDRNIHCK 124

Query: 418  DSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFN 597
            D+LFIA+ QHY K+NL +KAI LF+ + ++NC RTLQSFN LL+VLV+  R +DA +IF 
Sbjct: 125  DTLFIALFQHYAKANLINKAIQLFHEMNTYNCVRTLQSFNSLLNVLVDTDRFSDANEIFG 184

Query: 598  RSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNG 777
            R S+MGFRPNS+S+NI+IKG +++ E EEA  VF+ MLER++QP+VVTYNSLIGF  + G
Sbjct: 185  RCSQMGFRPNSISYNIMIKGWLKKGEVEEARKVFDEMLERKVQPSVVTYNSLIGFFSRKG 244

Query: 778  NLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFG 957
             L++A  LLEDM QK KYPNA+TYALLMEGLC VG ++ A+K+MFDM Y+GCKP+LVN+G
Sbjct: 245  ELEEATYLLEDMRQKGKYPNAVTYALLMEGLCMVGKYEEAKKMMFDMAYRGCKPRLVNYG 304

Query: 958  VLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            VL+SDLG++GKIEEA+ALL EMKK+RF+PDVVIYNI+
Sbjct: 305  VLVSDLGRRGKIEEAKALLQEMKKKRFRPDVVIYNIL 341



 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 62/268 (23%), Positives = 124/268 (46%)
 Frame = +1

Query: 238  LKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQ 417
            L + +    A  +F     +GF+ +  SY+ +I    +  +      + D + E  ++  
Sbjct: 170  LVDTDRFSDANEIFGRCSQMGFRPNSISYNIMIKGWLKKGEVEEARKVFDEMLERKVQPS 229

Query: 418  DSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFN 597
               + ++I  + +    ++A  L   +          ++  L++ L   G+  +AK +  
Sbjct: 230  VVTYNSLIGFFSRKGELEEATYLLEDMRQKGKYPNAVTYALLMEGLCMVGKYEEAKKMMF 289

Query: 598  RSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNG 777
              +  G +P  V++ +++    +R + EEA  + + M ++  +P VV YN LI FLCK G
Sbjct: 290  DMAYRGCKPRLVNYGVLVSDLGRRGKIEEAKALLQEMKKKRFRPDVVIYNILINFLCKEG 349

Query: 778  NLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFG 957
               +A  +L +M      PNA TY ++++G C   + +   K++  M      P+L  F 
Sbjct: 350  RATEAYKVLIEMQVGGFEPNAATYRMMVDGFCQTEDFEGGLKVLIAMLTSKHCPRLETFE 409

Query: 958  VLMSDLGKKGKIEEARALLGEMKKRRFK 1041
             L++ L K G ++ A  +L EM+ R  +
Sbjct: 410  RLVTGLLKCGNVDGACFVLEEMENRNLE 437


>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  402 bits (1032), Expect = e-109
 Identities = 197/331 (59%), Positives = 256/331 (77%)
 Frame = +1

Query: 76   IHQTRTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEVEN 255
            + + +T   H      H+Q Y+T    +PR  N  ++    + + +R IPF+ ++KEVE+
Sbjct: 3    LSKPKTTQIHRYINPAHYQQYKTLGLAKPRKGN--QKHQHFTRRQRRDIPFVNNVKEVED 60

Query: 256  PDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIA 435
            PD AL LF +Y   GF+HDYPSYSAL+YKLARSR F AVET+L Y+++ N+RC+D+LFIA
Sbjct: 61   PDKALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVRCRDTLFIA 120

Query: 436  VIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMG 615
            + +HYGK  L  KAI LFN +  FNC RTLQSFN LL+VLV+  RL DAK +F+RSS+MG
Sbjct: 121  LFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMG 180

Query: 616  FRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAM 795
            FR NSV FNI+IKG +++ EW +A  VF+ MLER+++P+VVTYNSLIG+LC+NG L KA 
Sbjct: 181  FRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAK 240

Query: 796  SLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDL 975
             L +DM +K K PNA+TYALLMEGLCS+G +  A+K++FDMEY+GCKPK +NFGVLM+DL
Sbjct: 241  GLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDL 300

Query: 976  GKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            GKKGKIEEA+ LL EMKKRRF+PDVVIYNI+
Sbjct: 301  GKKGKIEEAKLLLLEMKKRRFRPDVVIYNIL 331



 Score =  100 bits (250), Expect = 8e-19
 Identities = 69/266 (25%), Positives = 123/266 (46%)
 Frame = +1

Query: 265  ALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQ 444
            A+RLF E           S++AL+  L  +      + L D   E   R     F  +I+
Sbjct: 134  AIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFRLNSVPFNILIK 193

Query: 445  HYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRP 624
             + K     +A  +F+ +       ++ ++N L+  L   G L  AK +F    K G RP
Sbjct: 194  GWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRP 253

Query: 625  NSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLL 804
            N+V++ ++++G     E++EA  +   M  R  +P  + +  L+  L K G +++A  LL
Sbjct: 254  NAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLL 313

Query: 805  EDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKK 984
             +M ++R  P+ + Y +L+  LC  G    A K +F+M+  GC+     + +L     + 
Sbjct: 314  LEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQV 373

Query: 985  GKIEEARALLGEMKKRRFKPDVVIYN 1062
            G+ EE   +L  M   R  P +  +N
Sbjct: 374  GEFEEGLKVLNAMLVSRHAPRIETFN 399


>ref|XP_006417772.1| hypothetical protein EUTSA_v10009298mg [Eutrema salsugineum]
            gi|557095543|gb|ESQ36125.1| hypothetical protein
            EUTSA_v10009298mg [Eutrema salsugineum]
          Length = 460

 Score =  397 bits (1020), Expect = e-108
 Identities = 187/314 (59%), Positives = 245/314 (78%), Gaps = 1/314 (0%)
 Frame = +1

Query: 130  QSYQTFRSTRPRNK-NCHERAPKASPKVKRPIPFITDLKEVENPDSALRLFEEYQLLGFK 306
            Q Y T RS +   K N HE   K + K    +PF+TDLK++E+P+ +L LF  YQ +GF+
Sbjct: 20   QHYHTSRSVKSTKKANSHEPIHKVTRKPWEEVPFLTDLKDIEDPEESLSLFHHYQQMGFR 79

Query: 307  HDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDL 486
            HDYPSYS+LIYKLARSR+F+AV+ +L  ++  N+RC++SLF+A+IQHYGK+   DKA+D+
Sbjct: 80   HDYPSYSSLIYKLARSRNFDAVDQVLRLVRYRNVRCRESLFMALIQHYGKAGSVDKAVDV 139

Query: 487  FNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQ 666
            F ++ SF+C RT+QS N L++VLV+   L  AK  F+ +  M  RPNSVSFN++IKG + 
Sbjct: 140  FRKMTSFDCVRTIQSLNTLINVLVDHSELEKAKSFFDGAKDMRLRPNSVSFNVLIKGFLD 199

Query: 667  RCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAIT 846
            +C+WE AC VF+ MLE E+QPTVVTYNSL+GFLC+N +L KA SLLEDM QKR  PN +T
Sbjct: 200  KCDWEAACKVFDEMLEMEVQPTVVTYNSLVGFLCRNNDLAKAKSLLEDMIQKRIRPNPVT 259

Query: 847  YALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMK 1026
            + LLM+GLC  G ++ A+K+MFDMEY+GCKP LVN+GVLMSDLGK+GKI+EA+ LLGEMK
Sbjct: 260  FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKLLLGEMK 319

Query: 1027 KRRFKPDVVIYNIM 1068
            KRR KPDVVIYNI+
Sbjct: 320  KRRIKPDVVIYNIL 333



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 66/271 (24%), Positives = 121/271 (44%)
 Frame = +1

Query: 220  IPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKE 399
            I  + D  E+E   S    F+  + +  + +  S++ LI       D+ A   + D + E
Sbjct: 159  INVLVDHSELEKAKS---FFDGAKDMRLRPNSVSFNVLIKGFLDKCDWEAACKVFDEMLE 215

Query: 400  NNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLND 579
              ++     + +++    ++N   KA  L   +          +F  L+  L   G  N+
Sbjct: 216  MEVQPTVVTYNSLVGFLCRNNDLAKAKSLLEDMIQKRIRPNPVTFGLLMKGLCCKGEYNE 275

Query: 580  AKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIG 759
            AK +       G +P  V++ +++    +R + +EA  +   M +R I+P VV YN L+ 
Sbjct: 276  AKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKLLLGEMKKRRIKPDVVIYNILVN 335

Query: 760  FLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKP 939
             LC  G   +A  +L +M  K   PNA TY ++++G C +G+ DS   ++  M      P
Sbjct: 336  HLCTEGRAPEAYRMLTEMQMKGCKPNAATYRMMVDGFCRIGDLDSGLNVLNAMLASRHSP 395

Query: 940  KLVNFGVLMSDLGKKGKIEEARALLGEMKKR 1032
                F  ++S L K   ++ A  +L  M K+
Sbjct: 396  TPATFVCMVSGLIKGDNLDHACFVLEVMGKK 426


>ref|XP_007016541.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
            gi|508786904|gb|EOY34160.1| Tetratricopeptide repeat-like
            superfamily protein [Theobroma cacao]
          Length = 951

 Score =  396 bits (1018), Expect = e-108
 Identities = 191/330 (57%), Positives = 253/330 (76%), Gaps = 3/330 (0%)
 Frame = +1

Query: 88   RTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKR---PIPFITDLKEVENP 258
            R  + H      H + Y TF   +P  K  HE   K +   +R   P PF+T+LKE++ P
Sbjct: 494  RILVKHFVIIHRHSKHYHTFGPKKPTTKPDHETPQKTTKNRRRKWPPNPFVTNLKEIQEP 553

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            D AL LF EY  +G+KHDYPSYS+LIYKLA+SR+F AVETLL Y++  NI CQ++LF A+
Sbjct: 554  DEALSLFHEYYQMGYKHDYPSYSSLIYKLAKSRNFEAVETLLGYLQNLNIHCQETLFNAL 613

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
             + YGK+ L +KAI+LF+++PSFNC RT+QS N +L+ LV+  R  DAK IF++S KMGF
Sbjct: 614  FESYGKARLIEKAIELFHKMPSFNCVRTVQSLNSVLNALVDNDRFFDAKVIFDKSPKMGF 673

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            RPNS +FN++IKG ++R  ++EAC +F+ MLER ++P+VVTYNS IGFLCK G ++ A  
Sbjct: 674  RPNSTTFNVMIKGLLKREAFDEACCLFDEMLERNVEPSVVTYNSFIGFLCKKGEMENAEG 733

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
            L+EDM +K KYPNA+TYALLMEGLCS+G +  A+K+MFDMEY+GCK K++NFGVLM+ LG
Sbjct: 734  LVEDMVKKGKYPNAVTYALLMEGLCSLGKYKEAKKLMFDMEYKGCKTKVINFGVLMTYLG 793

Query: 979  KKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            K+G+IEEA++LL EMKKRRFKPDVVIYNI+
Sbjct: 794  KRGEIEEAKSLLREMKKRRFKPDVVIYNIL 823



 Score =  107 bits (267), Expect = 8e-21
 Identities = 70/259 (27%), Positives = 128/259 (49%)
 Frame = +1

Query: 274  LFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYG 453
            +F++   +GF+ +  +++ +I  L +   F+    L D + E N+      + + I    
Sbjct: 664  IFDKSPKMGFRPNSTTFNVMIKGLLKREAFDEACCLFDEMLERNVEPSVVTYNSFIGFLC 723

Query: 454  KSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSV 633
            K    + A  L   +          ++  L++ L   G+  +AK +       G +   +
Sbjct: 724  KKGEMENAEGLVEDMVKKGKYPNAVTYALLMEGLCSLGKYKEAKKLMFDMEYKGCKTKVI 783

Query: 634  SFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDM 813
            +F +++    +R E EEA ++   M +R  +P VV YN L+ +LCK G + +A  +L +M
Sbjct: 784  NFGVLMTYLGKRGEIEEAKSLLREMKKRRFKPDVVIYNILVNYLCKEGRVGEAYKVLIEM 843

Query: 814  TQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKI 993
              K   PNA TY ++++G C VG+ + A K++  M   G  P+L     L++ L K GKI
Sbjct: 844  QVKGCEPNAATYRMMVDGFCMVGDLEGALKVLNVMFTSGHCPRLETLCQLVTGLLKCGKI 903

Query: 994  EEARALLGEMKKRRFKPDV 1050
            + A  +L EM+KR+   D+
Sbjct: 904  DGACFVLEEMEKRKMSFDL 922



 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 57/255 (22%), Positives = 123/255 (48%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            + A+ LF +           S ++++  L  +  F   + + D   +   R   + F  +
Sbjct: 624  EKAIELFHKMPSFNCVRTVQSLNSVLNALVDNDRFFDAKVIFDKSPKMGFRPNSTTFNVM 683

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I+   K    D+A  LF+ +   N   ++ ++N  +  L + G + +A+ +     K G 
Sbjct: 684  IKGLLKREAFDEACCLFDEMLERNVEPSVVTYNSFIGFLCKKGEMENAEGLVEDMVKKGK 743

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
             PN+V++ ++++G     +++EA  +   M  +  +  V+ +  L+ +L K G +++A S
Sbjct: 744  YPNAVTYALLMEGLCSLGKYKEAKKLMFDMEYKGCKTKVINFGVLMTYLGKRGEIEEAKS 803

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
            LL +M ++R  P+ + Y +L+  LC  G    A K++ +M+ +GC+P    + +++    
Sbjct: 804  LLREMKKRRFKPDVVIYNILVNYLCKEGRVGEAYKVLIEMQVKGCEPNAATYRMMVDGFC 863

Query: 979  KKGKIEEARALLGEM 1023
              G +E A  +L  M
Sbjct: 864  MVGDLEGALKVLNVM 878


>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g07740, mitochondrial; Flags: Precursor
            gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
            repeats PF|01535 [Arabidopsis thaliana]
            gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
            thaliana] gi|31376389|gb|AAP49521.1| At1g07730
            [Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332190050|gb|AEE28171.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score =  396 bits (1017), Expect = e-108
 Identities = 186/312 (59%), Positives = 247/312 (79%), Gaps = 1/312 (0%)
 Frame = +1

Query: 136  YQTFRSTRPRNK-NCHERAPKASPKVKRPIPFITDLKEVENPDSALRLFEEYQLLGFKHD 312
            Y T R  +P  K + HE   K + K    +PF+TDLKE+E+P+ AL LF +YQ +GF+HD
Sbjct: 21   YHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHD 80

Query: 313  YPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFN 492
            YPSYS+LIYKLA+SR+F+AV+ +L  ++  N+RC++SLF+ +IQHYGK+   DKAID+F+
Sbjct: 81   YPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFH 140

Query: 493  RIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRC 672
            +I SF+C RT+QS N L++VLV+ G L  AK  F+ +  M  RPNSVSFNI+IKG + +C
Sbjct: 141  KITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKC 200

Query: 673  EWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYA 852
            +WE AC VF+ MLE E+QP+VVTYNSLIGFLC+N ++ KA SLLEDM +KR  PNA+T+ 
Sbjct: 201  DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFG 260

Query: 853  LLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKR 1032
            LLM+GLC  G ++ A+K+MFDMEY+GCKP LVN+G+LMSDLGK+G+I+EA+ LLGEMKKR
Sbjct: 261  LLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKR 320

Query: 1033 RFKPDVVIYNIM 1068
            R KPDVVIYNI+
Sbjct: 321  RIKPDVVIYNIL 332



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 61/258 (23%), Positives = 115/258 (44%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            + A   F+  + +  + +  S++ LI       D+ A   + D + E  ++     + ++
Sbjct: 168  EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I    +++   KA  L   +          +F  L+  L   G  N+AK +       G 
Sbjct: 228  IGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            +P  V++ I++    +R   +EA  +   M +R I+P VV YN L+  LC    + +A  
Sbjct: 288  KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
            +L +M  K   PNA TY ++++G C + + DS   ++  M      P    F  +++ L 
Sbjct: 348  VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407

Query: 979  KKGKIEEARALLGEMKKR 1032
            K G ++ A  +L  M K+
Sbjct: 408  KGGNLDHACFVLEVMGKK 425


>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297338258|gb|EFH68675.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 459

 Score =  395 bits (1016), Expect = e-107
 Identities = 186/312 (59%), Positives = 246/312 (78%), Gaps = 1/312 (0%)
 Frame = +1

Query: 136  YQTFRSTRPRNK-NCHERAPKASPKVKRPIPFITDLKEVENPDSALRLFEEYQLLGFKHD 312
            Y T R  +P  K   HE   K + K    +PF+TDLKE+E+P+ AL LF +YQ +GF+HD
Sbjct: 21   YHTSRPEKPTKKATSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHD 80

Query: 313  YPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFN 492
            YPSYS+LIYKLA+SR+F+AV+ +L  ++  N+RC++SLF+A+IQHYGK+   DKA+D+F+
Sbjct: 81   YPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMALIQHYGKAGWVDKAVDVFH 140

Query: 493  RIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRC 672
            ++ SF+C RT+QS N L++VLV+ G L  AK  F+ +  M  RPNSVSFNI+IKG + +C
Sbjct: 141  KLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKC 200

Query: 673  EWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYA 852
            +WE AC VF+ MLE E+QP+VVTYNSLIGFLC+N ++ KA SLLEDM +KR  PNA+T+ 
Sbjct: 201  DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFG 260

Query: 853  LLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKR 1032
            LLM+GLC  G ++ A+K+MFDMEY+GCKP LVN+GVLMSDLGK+GKI+EA+ LLGEMKKR
Sbjct: 261  LLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKR 320

Query: 1033 RFKPDVVIYNIM 1068
            R KPD VIYNI+
Sbjct: 321  RIKPDFVIYNIL 332



 Score = 87.4 bits (215), Expect = 9e-15
 Identities = 63/259 (24%), Positives = 117/259 (45%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            + A   F+  + +  + +  S++ LI       D+ A   + D + E  ++     + ++
Sbjct: 168  EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I    ++N   KA  L   +          +F  L+  L   G  N+AK +       G 
Sbjct: 228  IGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGC 287

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            +P  V++ +++    +R + +EA  +   M +R I+P  V YN L+  LC  G + +A  
Sbjct: 288  KPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYR 347

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
             L +M  K   PNA TY ++++G C +G+ DS   ++  M      P    F  ++S L 
Sbjct: 348  TLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLI 407

Query: 979  KKGKIEEARALLGEMKKRR 1035
            K G ++ A  +L  M K++
Sbjct: 408  KGGNLDHACFVLEVMGKKK 426


>ref|XP_006279438.1| hypothetical protein CARUB_v10007904mg, partial [Capsella rubella]
            gi|482548139|gb|EOA12336.1| hypothetical protein
            CARUB_v10007904mg, partial [Capsella rubella]
          Length = 551

 Score =  392 bits (1008), Expect = e-106
 Identities = 188/314 (59%), Positives = 244/314 (77%), Gaps = 1/314 (0%)
 Frame = +1

Query: 130  QSYQTFRSTRPRNK-NCHERAPKASPKVKRPIPFITDLKEVENPDSALRLFEEYQLLGFK 306
            Q Y T R  +P  K N HE   K + K    + F+TDLKE+E P+ AL LF +YQ +GF+
Sbjct: 20   QHYYTSRHDKPTKKANSHEPTHKFTRKPWEEVSFLTDLKEIEEPEEALALFNQYQEMGFR 79

Query: 307  HDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDL 486
            HDYPSYS+LIYKLA+SR+F+AV+ +L  I+  N+RC++SLFIA+IQHYGK+   DKA+D+
Sbjct: 80   HDYPSYSSLIYKLAKSRNFDAVDQILRLIRYRNVRCRESLFIALIQHYGKAGSVDKAVDV 139

Query: 487  FNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQ 666
            F+++ SF+C RT+QS N L++VLV+   L  AK  F+ +  +  RPNSVSFNI+IKG + 
Sbjct: 140  FHKMTSFDCVRTIQSLNTLINVLVDNSELEKAKSFFDGAKDLRLRPNSVSFNILIKGFLD 199

Query: 667  RCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAIT 846
            +C+WE AC VF+ MLE E+QP+VVTYNSLIGFLC+N +L KA SLLEDM QKR  PNA+T
Sbjct: 200  KCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDLGKAKSLLEDMFQKRIRPNAVT 259

Query: 847  YALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMK 1026
            + LLM+GLC  G++  A+K+MFDMEY+GCKP LVN+GVLMSDLG +GKI+EA+ LL EMK
Sbjct: 260  FGLLMKGLCCKGDYSEAKKLMFDMEYRGCKPGLVNYGVLMSDLGVRGKIDEAKLLLSEMK 319

Query: 1027 KRRFKPDVVIYNIM 1068
            KRR KPDVVIYNI+
Sbjct: 320  KRRIKPDVVIYNIL 333



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 65/261 (24%), Positives = 117/261 (44%)
 Frame = +1

Query: 220  IPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKE 399
            I  + D  E+E   S    F+  + L  + +  S++ LI       D+ A   + D + E
Sbjct: 159  INVLVDNSELEKAKS---FFDGAKDLRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 215

Query: 400  NNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLND 579
              ++     + ++I    ++N   KA  L   +          +F  L+  L   G  ++
Sbjct: 216  MEVQPSVVTYNSLIGFLCRNNDLGKAKSLLEDMFQKRIRPNAVTFGLLMKGLCCKGDYSE 275

Query: 580  AKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIG 759
            AK +       G +P  V++ +++     R + +EA  +   M +R I+P VV YN L+ 
Sbjct: 276  AKKLMFDMEYRGCKPGLVNYGVLMSDLGVRGKIDEAKLLLSEMKKRRIKPDVVIYNILVN 335

Query: 760  FLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKP 939
             LC  G   +A  +L +M  K   PNA TY ++++G C +G+ DSA  ++  M      P
Sbjct: 336  HLCTEGRATEAYRILTEMQMKGCKPNAATYRMMVDGFCRIGDFDSALDVLNAMLASRHFP 395

Query: 940  KLVNFGVLMSDLGKKGKIEEA 1002
                F  +++ L K G ++ A
Sbjct: 396  TPATFVCMVAGLIKGGNLDHA 416


>ref|XP_002303899.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550343608|gb|EEE78878.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 463

 Score =  383 bits (984), Expect = e-104
 Identities = 183/323 (56%), Positives = 244/323 (75%), Gaps = 1/323 (0%)
 Frame = +1

Query: 103  HHSPKQPHFQSYQTFRSTRPRNKNCHER-APKASPKVKRPIPFITDLKEVENPDSALRLF 279
            HH  +   FQ Y+T    +P+ K  H R   K S + +   PF+  +KE  +P  AL LF
Sbjct: 10   HHFWRHTFFQQYRTLPFNKPKAKPRHRRKGHKTSSRNRNDAPFVNHVKEARDPVEALTLF 69

Query: 280  EEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKS 459
             EY   GFK DYPSY+AL+YKLAR +DF AVE +L Y+++ N+ CQ+++FIA+ QHYGK+
Sbjct: 70   HEYLQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQHYGKA 129

Query: 460  NLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSF 639
             L  KA++LFNR+  FNC RT QS N LL+VLV+ G   +A ++F++  +MGFR NSV+F
Sbjct: 130  QLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAF 189

Query: 640  NIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQ 819
            N++IKG +++ EWE+A  VF+ MLER+++P+VVTYNSLIG+LC+NG LDKA  LLEDM +
Sbjct: 190  NVMIKGWLKKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIK 249

Query: 820  KRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEE 999
            K K PNAIT+ALLMEG C +G H+ A+K+MFDMEY+GCKP +VNFGVLMSDLGK+GKI+E
Sbjct: 250  KGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDE 309

Query: 1000 ARALLGEMKKRRFKPDVVIYNIM 1068
            A+++L EMKKR  KPDVV YNI+
Sbjct: 310  AKSVLHEMKKRHMKPDVVTYNIL 332



 Score =  100 bits (249), Expect = 1e-18
 Identities = 68/257 (26%), Positives = 125/257 (48%)
 Frame = +1

Query: 265  ALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQ 444
            A  LF++   +GF+ +  +++ +I    +  ++     + D + E  +      + ++I 
Sbjct: 170  ANELFDKGYEMGFRLNSVAFNVMIKGWLKKGEWEQASKVFDEMLERKVEPSVVTYNSLIG 229

Query: 445  HYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRP 624
            +  ++   DKA  L   +          +F  L++     G  N+AK +       G +P
Sbjct: 230  YLCRNGELDKAKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKP 289

Query: 625  NSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLL 804
              V+F +++    +R + +EA +V   M +R ++P VVTYN LI +LCK G    A  +L
Sbjct: 290  TVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVL 349

Query: 805  EDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKK 984
             +M       NA TY +L++G C VG+ +   K++  M   G  P++  F  L+  L K 
Sbjct: 350  FEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKS 409

Query: 985  GKIEEARALLGEMKKRR 1035
            G ++ A  +L EM+KR+
Sbjct: 410  GNLDGACFVLEEMEKRQ 426



 Score = 99.0 bits (245), Expect = 3e-18
 Identities = 65/253 (25%), Positives = 117/253 (46%)
 Frame = +1

Query: 265  ALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQ 444
            A+ LF             S ++L+  L  +  F     L D   E   R     F  +I+
Sbjct: 135  AVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIK 194

Query: 445  HYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRP 624
             + K    ++A  +F+ +       ++ ++N L+  L   G L+ AK +     K G RP
Sbjct: 195  GWLKKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRP 254

Query: 625  NSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLL 804
            N+++F ++++G     E  EA  +   M  R  +PTVV +  L+  L K G +D+A S+L
Sbjct: 255  NAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVL 314

Query: 805  EDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKK 984
             +M ++   P+ +TY +L+  LC  G    A +++F+M+  GC+     + +L+    + 
Sbjct: 315  HEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRV 374

Query: 985  GKIEEARALLGEM 1023
            G  E    +L  M
Sbjct: 375  GDFEGGLKVLNAM 387


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
            mitochondrial-like [Glycine max]
          Length = 449

 Score =  381 bits (978), Expect = e-103
 Identities = 180/297 (60%), Positives = 243/297 (81%)
 Frame = +1

Query: 178  HERAPKASPKVKRPIPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSR 357
            HER    +PK ++ IPF+T++K VE+P+ AL LF  Y+  GF+H YPSY+AL+YKLARSR
Sbjct: 32   HERP---TPKFRKRIPFVTEVKTVEDPEEALSLFHRYKEQGFRHYYPSYAALLYKLARSR 88

Query: 358  DFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFN 537
             F+AVET+L ++K+  ++C++S+FIA+ QHYG     +KA++LFNR+P FNCTRT+QSFN
Sbjct: 89   MFDAVETILAHMKDTEMQCRESVFIALFQHYGP----EKAVELFNRMPQFNCTRTIQSFN 144

Query: 538  FLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLER 717
             LL+VL++  R ++A DIF +S +MGFRPN+V+FNI++KG + + EW +AC VF+ ML++
Sbjct: 145  ALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQK 204

Query: 718  EIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSA 897
             +QP+VVTYNSLIGFLC+ G+LDKAM+LLEDM QK K+ N +TYALLMEGLCSV   + A
Sbjct: 205  RVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEA 264

Query: 898  RKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
            +K+MFDM Y+GCK + VNFGVLM+DLGK+GK+EEA++LL EMKKRR KPDVV YNI+
Sbjct: 265  KKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNIL 321



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 62/264 (23%), Positives = 128/264 (48%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            D A  +F +   +GF+ +  +++ ++       ++     + D + +  ++     + ++
Sbjct: 157  DEANDIFGKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSL 216

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I    +    DKA+ L   +          ++  L++ L    +  +AK +    +  G 
Sbjct: 217  IGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGC 276

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            +   V+F +++    +R + EEA ++   M +R ++P VVTYN LI +LCK G   +A  
Sbjct: 277  KAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYK 336

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
            +L +M      PNA TY ++++GLC +G+ + A  ++  M      P+   F  ++  L 
Sbjct: 337  VLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLL 396

Query: 979  KKGKIEEARALLGEMKKRRFKPDV 1050
            K G I+ +  +L EM+KR+ + D+
Sbjct: 397  KSGNIDGSCFVLEEMEKRKLEFDL 420



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 43/206 (20%), Positives = 94/206 (45%)
 Frame = +1

Query: 259 DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
           D A+ L E+    G   +  +Y+ L+  L         + L+  +     + Q   F  +
Sbjct: 227 DKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVL 286

Query: 439 IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
           +   GK    ++A  L + +        + ++N L++ L + G+  +A  +       G 
Sbjct: 287 MNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGC 346

Query: 619 RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            PN+ ++ +++ G  Q  ++E A +V   ML     P   T+N ++  L K+GN+D +  
Sbjct: 347 VPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCF 406

Query: 799 LLEDMTQKRKYPNAITYALLMEGLCS 876
           +LE+M +++   +  ++  +++  CS
Sbjct: 407 VLEEMEKRKLEFDLESWETIIKSACS 432


>ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g07740, mitochondrial-like [Cucumis sativus]
          Length = 460

 Score =  375 bits (962), Expect = e-101
 Identities = 181/333 (54%), Positives = 247/333 (74%)
 Frame = +1

Query: 70   KAIHQTRTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEV 249
            K I ++R  I H +     FQ   TF   +   +N H    K   K++  IPF+TD+KEV
Sbjct: 4    KLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNH----KQRRKIRERIPFVTDVKEV 59

Query: 250  ENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLF 429
            ++P  AL LFE Y   GFKH YPSYS+LIYKLARSR F AVET+L +++  NIRC ++LF
Sbjct: 60   KDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLF 119

Query: 430  IAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSK 609
            +A+IQHYGK++L +K I+LF+++PSFNC RTLQSFN LL+ LV+  + + A +IF ++ +
Sbjct: 120  VALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYE 179

Query: 610  MGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDK 789
            MGFRPNSVS+NI+IKG +++  WE+ACN+F+ MLE+ +QP+VVTYNS +G LC+ G +D 
Sbjct: 180  MGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDT 239

Query: 790  AMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMS 969
            A+ L ++MT+K  +PNA+TYALLMEG C +G +  A+K+MFDME+ GCK + VN+GVLM+
Sbjct: 240  ALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMT 299

Query: 970  DLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
             LGK G I+E  +LL EMKKRR KPDVV YNI+
Sbjct: 300  HLGKTGNIDEMESLLNEMKKRRLKPDVVTYNIL 332



 Score = 91.7 bits (226), Expect = 5e-16
 Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 36/306 (11%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            +  + LF +           S++ L+  L     F+    +     E   R     +  +
Sbjct: 133  EKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIM 192

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I+ + K    ++A +LF+ +       ++ ++N  L VL   G ++ A  +F   ++ G 
Sbjct: 193  IKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGH 252

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNV-----FEG-------------------------- 705
             PN+V++ ++++G     +++EA  +     F G                          
Sbjct: 253  HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMES 312

Query: 706  ----MLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLC 873
                M +R ++P VVTYN L+ +LCK G +  A  +L  M      PNA TY ++++G C
Sbjct: 313  LLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYC 372

Query: 874  SVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGK-KGKIEEARALLGEMKKRRFKPDV 1050
            + G+ D A KI+  M   G  P L  F  L+  L K +   +    +L EM+KR+ + D 
Sbjct: 373  NAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDA 432

Query: 1051 VIYNIM 1068
              + I+
Sbjct: 433  ETWRIL 438


>ref|XP_007132119.1| hypothetical protein PHAVU_011G068200g [Phaseolus vulgaris]
            gi|561005119|gb|ESW04113.1| hypothetical protein
            PHAVU_011G068200g [Phaseolus vulgaris]
          Length = 447

 Score =  374 bits (959), Expect = e-101
 Identities = 179/308 (58%), Positives = 245/308 (79%)
 Frame = +1

Query: 145  FRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEVENPDSALRLFEEYQLLGFKHDYPSY 324
            F + +PR+   HER    +PK +R IPF+T++K VE+P+ AL LF  Y+  GF+H YPSY
Sbjct: 24   FHTHKPRS---HERP---TPKFRRRIPFVTEVKTVEDPEEALSLFHRYKEQGFRHHYPSY 77

Query: 325  SALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAVIQHYGKSNLSDKAIDLFNRIPS 504
            +AL+YKLARSR F AVET+L ++K+ +++C++S+FIA+ Q+YG      KA++LFNR+P 
Sbjct: 78   AALLYKLARSRMFEAVETILAHMKDTDMQCRESVFIALFQYYGPQ----KAVELFNRMPQ 133

Query: 505  FNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGFRPNSVSFNIIIKGHVQRCEWEE 684
            FNC RT+QS N LL+VLV+    ++A D+F RS +MGFRPN+V++NI+IKG + + EW +
Sbjct: 134  FNCVRTIQSLNALLNVLVDNDSFDEANDVFGRSYEMGFRPNTVTYNIMIKGWLGKGEWGK 193

Query: 685  ACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLME 864
            AC VF+ ML++ ++P+VVTYNSLIGFLC+ G+LDKAM+LLEDM QK +  N +TYALLME
Sbjct: 194  ACEVFDEMLQKRVEPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGRRANEVTYALLME 253

Query: 865  GLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGKKGKIEEARALLGEMKKRRFKP 1044
            GLCSV  +D A+K+MFDM Y+GCKP+ VNFGVLM+DLGK+GK+EE ++LL EMKKRR KP
Sbjct: 254  GLCSVEKYDEAKKLMFDMAYRGCKPQPVNFGVLMNDLGKRGKVEEIKSLLHEMKKRRLKP 313

Query: 1045 DVVIYNIM 1068
            DVV +NI+
Sbjct: 314  DVVTFNIL 321



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 64/264 (24%), Positives = 127/264 (48%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            D A  +F     +GF+ +  +Y+ +I       ++     + D + +  +      + ++
Sbjct: 157  DEANDVFGRSYEMGFRPNTVTYNIMIKGWLGKGEWGKACEVFDEMLQKRVEPSVVTYNSL 216

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I    +    DKA+ L   +          ++  L++ L    + ++AK +    +  G 
Sbjct: 217  IGFLCRKGDLDKAMALLEDMGQKGRRANEVTYALLMEGLCSVEKYDEAKKLMFDMAYRGC 276

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            +P  V+F +++    +R + EE  ++   M +R ++P VVT+N LI +LCK G   +A  
Sbjct: 277  KPQPVNFGVLMNDLGKRGKVEEIKSLLHEMKKRRLKPDVVTFNILINYLCKEGKAVEAYK 336

Query: 799  LLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLG 978
            +L +M      PNA TY ++++GLC +G+ ++   ++  M      P+   F  L+  L 
Sbjct: 337  VLFEMKIGGCEPNAATYRMVVDGLCRIGDFETGLSVLNAMLTSRHWPRSETFNCLVVGLL 396

Query: 979  KKGKIEEARALLGEMKKRRFKPDV 1050
            K G I+ A  +L EM+KR+ + D+
Sbjct: 397  KSGNIDGACFVLEEMEKRKVEFDL 420



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 43/206 (20%), Positives = 95/206 (46%)
 Frame = +1

Query: 259 DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
           D A+ L E+    G + +  +Y+ L+  L     ++  + L+  +     + Q   F  +
Sbjct: 227 DKAMALLEDMGQKGRRANEVTYALLMEGLCSVEKYDEAKKLMFDMAYRGCKPQPVNFGVL 286

Query: 439 IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
           +   GK    ++   L + +        + +FN L++ L + G+  +A  +       G 
Sbjct: 287 MNDLGKRGKVEEIKSLLHEMKKRRLKPDVVTFNILINYLCKEGKAVEAYKVLFEMKIGGC 346

Query: 619 RPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDKAMS 798
            PN+ ++ +++ G  +  ++E   +V   ML     P   T+N L+  L K+GN+D A  
Sbjct: 347 EPNAATYRMVVDGLCRIGDFETGLSVLNAMLTSRHWPRSETFNCLVVGLLKSGNIDGACF 406

Query: 799 LLEDMTQKRKYPNAITYALLMEGLCS 876
           +LE+M +++   +  ++  +++  CS
Sbjct: 407 VLEEMEKRKVEFDLGSWETIIKFACS 432


>ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
            mitochondrial-like [Cucumis sativus]
          Length = 460

 Score =  372 bits (956), Expect = e-100
 Identities = 180/333 (54%), Positives = 246/333 (73%)
 Frame = +1

Query: 70   KAIHQTRTRIAHHSPKQPHFQSYQTFRSTRPRNKNCHERAPKASPKVKRPIPFITDLKEV 249
            K I ++R  I H +     FQ   TF   +   +N H    K   K++  IPF+TD+KEV
Sbjct: 4    KLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNH----KQRRKIRERIPFVTDVKEV 59

Query: 250  ENPDSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLF 429
            ++P  AL LFE Y   GFKH YPSYS+LIYKLARSR F AVET+L +++  NIRC ++LF
Sbjct: 60   KDPCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLF 119

Query: 430  IAVIQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSK 609
            +A+IQHYGK++L +K I+LF+++PSFNC RTLQSFN LL+ LV+  + + A +IF ++ +
Sbjct: 120  VALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYE 179

Query: 610  MGFRPNSVSFNIIIKGHVQRCEWEEACNVFEGMLEREIQPTVVTYNSLIGFLCKNGNLDK 789
            M FRPNSVS+NI+IKG +++  WE+ACN+F+ MLE+ +QP+VVTYNS +G LC+ G +D 
Sbjct: 180  MDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDT 239

Query: 790  AMSLLEDMTQKRKYPNAITYALLMEGLCSVGNHDSARKIMFDMEYQGCKPKLVNFGVLMS 969
            A+ L ++MT+K  +PNA+TYALLMEG C +G +  A+K+MFDME+ GCK + VN+GVLM+
Sbjct: 240  ALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMT 299

Query: 970  DLGKKGKIEEARALLGEMKKRRFKPDVVIYNIM 1068
             LGK G I+E  +LL EMKKRR KPDVV YNI+
Sbjct: 300  HLGKTGNIDEMESLLNEMKKRRLKPDVVTYNIL 332



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 36/306 (11%)
 Frame = +1

Query: 259  DSALRLFEEYQLLGFKHDYPSYSALIYKLARSRDFNAVETLLDYIKENNIRCQDSLFIAV 438
            +  + LF +           S++ L+  L     F+    +     E + R     +  +
Sbjct: 133  EKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIM 192

Query: 439  IQHYGKSNLSDKAIDLFNRIPSFNCTRTLQSFNFLLDVLVEAGRLNDAKDIFNRSSKMGF 618
            I+ + K    ++A +LF+ +       ++ ++N  L VL   G ++ A  +F   ++ G 
Sbjct: 193  IKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGH 252

Query: 619  RPNSVSFNIIIKGHVQRCEWEEACNV-----FEG-------------------------- 705
             PN+V++ ++++G     +++EA  +     F G                          
Sbjct: 253  HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMES 312

Query: 706  ----MLEREIQPTVVTYNSLIGFLCKNGNLDKAMSLLEDMTQKRKYPNAITYALLMEGLC 873
                M +R ++P VVTYN L+ +LCK G +  A  +L  M      PNA TY ++++G C
Sbjct: 313  LLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYC 372

Query: 874  SVGNHDSARKIMFDMEYQGCKPKLVNFGVLMSDLGK-KGKIEEARALLGEMKKRRFKPDV 1050
            + G+ D A KI+  M   G  P L  F  L+  L K +   +    +L EM+KR+ + D 
Sbjct: 373  NAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEMEKRQLRFDA 432

Query: 1051 VIYNIM 1068
              + I+
Sbjct: 433  ETWRIL 438