BLASTX nr result
ID: Akebia24_contig00015344
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00015344 (714 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 206 8e-51 ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobr... 199 1e-48 ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobr... 199 1e-48 ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 197 3e-48 ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 197 4e-48 gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 196 6e-48 ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun... 196 6e-48 ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 195 1e-47 sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 194 3e-47 ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] g... 192 9e-47 gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indi... 192 9e-47 gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus... 192 1e-46 gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativ... 192 1e-46 sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 191 2e-46 ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 191 2e-46 ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [S... 189 6e-46 ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|... 189 6e-46 ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 189 1e-45 ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 188 1e-45 ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp... 188 1e-45 >ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera] Length = 288 Score = 206 bits (523), Expect = 8e-51 Identities = 106/159 (66%), Positives = 123/159 (77%), Gaps = 15/159 (9%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP---------------RKEDS 578 SRGFGFVTMSTV+EV+AAAQQ NGYELEGR LRVN GPPP R E++ Sbjct: 130 SRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENT 189 Query: 577 PSQGVRTGASVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGF 398 +G R GA++N N++YVGNLSWGVDD L TLFSEQG+V EA+VI DRE+GRSRGFGF Sbjct: 190 NFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGF 249 Query: 397 VTYSSAQEVNNAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 VTY+SA+EVN A+ SLDG++ NGR IRVTM E RPRRQF Sbjct: 250 VTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288 Score = 69.7 bits (169), Expect = 9e-10 Identities = 35/83 (42%), Positives = 50/83 (60%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + VD + L LF + G V +VI D+ +GRSRGFGFVT S+ +EV A Sbjct: 91 KLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQ 150 Query: 352 LDGLNFNGRKIRVTMVEERPRRQ 284 +G GR++RV RR+ Sbjct: 151 FNGYELEGRQLRVNSGPPPARRE 173 >ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobroma cacao] gi|508715952|gb|EOY07849.1| RNA-binding family protein isoform 2 [Theobroma cacao] Length = 157 Score = 199 bits (505), Expect = 1e-48 Identities = 99/145 (68%), Positives = 120/145 (82%), Gaps = 1/145 (0%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 536 SRGFGFVTMST +EV+AAAQQ NGYELEGR LRVN GPPP R+E+ +G R ++ Sbjct: 13 SRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRREEFSPRGSRGAPALGAS 72 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N+VYVGNLSWGVDD L TLFSEQG+V EAKV+ DRESGRSRGFGFVTY+SA+EV++A+ Sbjct: 73 NRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDSAIK 132 Query: 355 SLDGLNFNGRKIRVTMVEERPRRQF 281 SL+G++ +GR IRV++ E RPRRQF Sbjct: 133 SLNGVDLDGRPIRVSVAESRPRRQF 157 >ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobroma cacao] gi|508715951|gb|EOY07848.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 254 Score = 199 bits (505), Expect = 1e-48 Identities = 99/145 (68%), Positives = 120/145 (82%), Gaps = 1/145 (0%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 536 SRGFGFVTMST +EV+AAAQQ NGYELEGR LRVN GPPP R+E+ +G R ++ Sbjct: 110 SRGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRREEFSPRGSRGAPALGAS 169 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N+VYVGNLSWGVDD L TLFSEQG+V EAKV+ DRESGRSRGFGFVTY+SA+EV++A+ Sbjct: 170 NRVYVGNLSWGVDDLALETLFSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDSAIK 229 Query: 355 SLDGLNFNGRKIRVTMVEERPRRQF 281 SL+G++ +GR IRV++ E RPRRQF Sbjct: 230 SLNGVDLDGRPIRVSVAESRPRRQF 254 >ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|568855826|ref|XP_006481497.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Citrus sinensis] gi|557530828|gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 282 Score = 197 bits (501), Expect = 3e-48 Identities = 105/149 (70%), Positives = 122/149 (81%), Gaps = 5/149 (3%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP--RKEDSPS--QGVRTGASV 545 SRGFGFVTMS+V+EV+AAAQQ NGYELEGRPLRVN GPPP R+E SP +G GA Sbjct: 134 SRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPS 193 Query: 544 NGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNN 365 +G N+VYVGNLSWGVDD L TLF EQG+V EAKV+ DRESGRSRGFGFVTYSSA+EV+N Sbjct: 194 SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDN 253 Query: 364 AVSSLDGLNFNGRKIRVTMVEERP-RRQF 281 A+ SL+G++ GR IRV++ E RP RRQF Sbjct: 254 AIDSLNGVDLAGRAIRVSVAEARPQRRQF 282 Score = 73.2 bits (178), Expect = 8e-11 Identities = 38/91 (41%), Positives = 53/91 (58%) Frame = -3 Query: 556 GASVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQ 377 G++ + +++VGNL + VD + L LF G V +VI D+ +GRSRGFGFVT SS + Sbjct: 87 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146 Query: 376 EVNNAVSSLDGLNFNGRKIRVTMVEERPRRQ 284 EV A +G GR +RV PRR+ Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSGPPPPRRE 177 >ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 273 Score = 197 bits (500), Expect = 4e-48 Identities = 94/144 (65%), Positives = 120/144 (83%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRN 533 SRGFGFVTM+T++EV+AA++Q NGYEL+GR LRVN+GPPP+KE S S+G R G + + N Sbjct: 130 SRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGN 189 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +VYVGNLSW VD+ L TLF E+GRV +AKV+ DR+SGRSRGFGFVTYSSA+EV+NA+ S Sbjct: 190 RVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAEEVDNAIDS 249 Query: 352 LDGLNFNGRKIRVTMVEERPRRQF 281 L+G +GR IRV++ E +PRRQF Sbjct: 250 LNGAELDGRAIRVSVAEAKPRRQF 273 Score = 64.7 bits (156), Expect = 3e-08 Identities = 32/73 (43%), Positives = 46/73 (63%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + VD + L LF G V +VI D+ +GRSRGFGFVT ++ +EV A Sbjct: 91 KLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQ 150 Query: 352 LDGLNFNGRKIRV 314 +G +GR +RV Sbjct: 151 FNGYELDGRTLRV 163 >gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] Length = 296 Score = 196 bits (498), Expect = 6e-48 Identities = 100/155 (64%), Positives = 122/155 (78%), Gaps = 11/155 (7%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 536 SRGFGFVTMS++ EV+AAAQQ NGYELEGRPLRVNYGPPP R++DS +G R G G Sbjct: 142 SRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGGGGGGGG 201 Query: 535 ----------NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYS 386 N+VYVGNLSWGVD++ L +LFSEQG+V EAKV+ DR+SGRSRGFGFVTY+ Sbjct: 202 GGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYN 261 Query: 385 SAQEVNNAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 +A EVN+A++SL+G++ NGR IRVT E +PRR F Sbjct: 262 TADEVNSAINSLNGVDLNGRSIRVTHAEAKPRRSF 296 Score = 68.2 bits (165), Expect = 3e-09 Identities = 34/73 (46%), Positives = 44/73 (60%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + VD + L LF G V +VI D+ +GRSRGFGFVT SS EV A Sbjct: 103 KLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRGFGFVTMSSIDEVEAAAQQ 162 Query: 352 LDGLNFNGRKIRV 314 +G GR +RV Sbjct: 163 FNGYELEGRPLRV 175 >ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] gi|462401286|gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] Length = 298 Score = 196 bits (498), Expect = 6e-48 Identities = 93/144 (64%), Positives = 115/144 (79%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRN 533 SRGFGFVTMS+V+E + AA+QLNGYEL+GR LRVNYGPPP + + +G R G + N Sbjct: 155 SRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGSDSSN 214 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 ++YVGNL+WGVD+ L LFSEQG+V EAKV+ DR+SGRSRGFGFVTY +A E+N+A+ S Sbjct: 215 RLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAMES 274 Query: 352 LDGLNFNGRKIRVTMVEERPRRQF 281 LDG++ NGR IRVT E RPRRQF Sbjct: 275 LDGVDLNGRSIRVTAAEPRPRRQF 298 Score = 73.2 bits (178), Expect = 8e-11 Identities = 37/83 (44%), Positives = 49/83 (59%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + VD + L LF G V +VI D+ +GRSRGFGFVT SS QE A Sbjct: 116 KLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQ 175 Query: 352 LDGLNFNGRKIRVTMVEERPRRQ 284 L+G +GR +RV PR + Sbjct: 176 LNGYELDGRALRVNYGPPPPRSE 198 >ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria italica] Length = 265 Score = 195 bits (496), Expect = 1e-47 Identities = 96/148 (64%), Positives = 117/148 (79%), Gaps = 4/148 (2%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS----V 545 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP ++DS + R G V Sbjct: 118 SRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDSAPRAPRGGGGGGNFV 177 Query: 544 NGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNN 365 + N+VYVGNLSWGVD+S L LFSEQG+V +AKVI DRESGRSRGFGFVTY SA+EVNN Sbjct: 178 DSGNKVYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 237 Query: 364 AVSSLDGLNFNGRKIRVTMVEERPRRQF 281 A+S+LDG++ +GR+IRVT+ E +PRRQF Sbjct: 238 AISNLDGIDLDGRQIRVTVAESKPRRQF 265 Score = 76.6 bits (187), Expect = 7e-12 Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 13/149 (8%) Frame = -3 Query: 697 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRNQ---- 530 F+ +S+ K A + L PLR P R + + V + G Q Sbjct: 14 FLALSSPKPAATVASAFLPFRL---PLRAVSAPGRRVFEPVAVAVSSEYETEGAEQEEEG 70 Query: 529 ---------VYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQ 377 ++VGNL + VD + L LF + G V +V+ DR +GRSRGFGFVT SSA+ Sbjct: 71 AEEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAE 130 Query: 376 EVNNAVSSLDGLNFNGRKIRVTMVEERPR 290 E AV +G F GR +RV PR Sbjct: 131 EAGAAVEQFNGYTFQGRPLRVNSGPPPPR 159 >sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName: Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] Length = 273 Score = 194 bits (492), Expect = 3e-47 Identities = 99/147 (67%), Positives = 117/147 (79%), Gaps = 3/147 (2%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPS--QGVRTGASVNG 539 SRGFGFVTMS+ +EV+AA QQ NGYEL+GR LRVN GPPP K ++ S G R G S + Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDS 186 Query: 538 RNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAV 359 N+VYVGNL+WGVD L TLFSEQG+V +AKV+ DR+SGRSRGFGFVTYSSA+EVNNA+ Sbjct: 187 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 246 Query: 358 SSLDGLNFNGRKIRVTMVEER-PRRQF 281 SLDG++ NGR IRV+ E R PRRQF Sbjct: 247 ESLDGVDLNGRAIRVSPAEARPPRRQF 273 Score = 67.0 bits (162), Expect = 6e-09 Identities = 33/73 (45%), Positives = 45/73 (61%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + D + L LF G V +VI D+ +GRSRGFGFVT SS +EV A Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147 Query: 352 LDGLNFNGRKIRV 314 +G +GR +RV Sbjct: 148 FNGYELDGRALRV 160 >ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza sativa Japonica Group] gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group] gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group] Length = 264 Score = 192 bits (488), Expect = 9e-47 Identities = 94/145 (64%), Positives = 115/145 (79%), Gaps = 1/145 (0%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS-VNGR 536 SRGFGFVTMST +E AA +Q NGY +GRPLRVN GPPP ++D + R G S + Sbjct: 120 SRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSS 179 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N++YVGNL+WGVD+S L LFSEQG V +AKVI DRESGRSRGFGFVTY SA+EVNNA+S Sbjct: 180 NKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAIS 239 Query: 355 SLDGLNFNGRKIRVTMVEERPRRQF 281 +LDG++ +GR+IRVT+ E +PRRQF Sbjct: 240 NLDGVDLDGRQIRVTVAESKPRRQF 264 Score = 79.7 bits (195), Expect = 9e-13 Identities = 47/118 (39%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Frame = -3 Query: 622 PLRVNYGPPPRKEDSPSQGVRTGASVNGRN----QVYVGNLSWGVDDSDLGTLFSEQGRV 455 PLR P S + GA G +V+VGNL + VD + L LF + G V Sbjct: 47 PLRRRLSPVAVAVSSEVEEEEGGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSV 106 Query: 454 FEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 +V+ DR++GRSRGFGFVT S+A+E AV +G F GR +RV PR F Sbjct: 107 EMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDF 164 >gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group] Length = 259 Score = 192 bits (488), Expect = 9e-47 Identities = 94/145 (64%), Positives = 115/145 (79%), Gaps = 1/145 (0%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS-VNGR 536 SRGFGFVTMST +E AA +Q NGY +GRPLRVN GPPP ++D + R G S + Sbjct: 115 SRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSS 174 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N++YVGNL+WGVD+S L LFSEQG V +AKVI DRESGRSRGFGFVTY SA+EVNNA+S Sbjct: 175 NKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAIS 234 Query: 355 SLDGLNFNGRKIRVTMVEERPRRQF 281 +LDG++ +GR+IRVT+ E +PRRQF Sbjct: 235 NLDGVDLDGRQIRVTVAESKPRRQF 259 Score = 78.6 bits (192), Expect = 2e-12 Identities = 39/84 (46%), Positives = 52/84 (61%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +V+VGNL + VD + L LF + G V +V+ DR++GRSRGFGFVT S+A+E AV Sbjct: 76 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 135 Query: 352 LDGLNFNGRKIRVTMVEERPRRQF 281 +G F GR +RV PR F Sbjct: 136 FNGYTFQGRPLRVNSGPPPPRDDF 159 >gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus] Length = 309 Score = 192 bits (487), Expect = 1e-46 Identities = 97/141 (68%), Positives = 115/141 (81%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRN 533 SRGFGFVTMS++ E +AAAQQ NGYEL+GR LRVN GPPP K D+P G R +S N N Sbjct: 169 SRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNSGPPPAKSDTPFGGPRRTSSGN-TN 227 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +VYVGNLSWGVD+S L TLFSEQG+V EA+V+ DRESGRSRGFGFVTYSS +EVN+A+ + Sbjct: 228 RVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEA 287 Query: 352 LDGLNFNGRKIRVTMVEERPR 290 LDG + +GR IRV+ EERPR Sbjct: 288 LDGADLDGRSIRVSPAEERPR 308 Score = 66.6 bits (161), Expect = 8e-09 Identities = 34/73 (46%), Positives = 44/73 (60%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + VD + L LF + G V +VI D+ SGRSRGFGFVT SS E A Sbjct: 130 KLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQ 189 Query: 352 LDGLNFNGRKIRV 314 +G GR +RV Sbjct: 190 FNGYELQGRALRV 202 >gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] Length = 205 Score = 192 bits (487), Expect = 1e-46 Identities = 94/145 (64%), Positives = 115/145 (79%), Gaps = 1/145 (0%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS-VNGR 536 SRGFGFVTMST +E AA +Q NGY +GRPLRVN GPPP ++D + R G S + Sbjct: 61 SRGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSS 120 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N++YVGNL+WGVD+S L LFSEQG V +AKVI DRESGRSRGFGFVTY SA+EVNNA+S Sbjct: 121 NKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAIS 180 Query: 355 SLDGLNFNGRKIRVTMVEERPRRQF 281 +LDG++ +GR+IRVT+ E +PRRQF Sbjct: 181 NLDGVDLDGRQIRVTVAESKPRRQF 205 Score = 78.2 bits (191), Expect = 3e-12 Identities = 38/84 (45%), Positives = 52/84 (61%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +V+VGNL + VD + L LF + G V +V+ DR++GRSRGFGFVT S+A+E A+ Sbjct: 22 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAIEQ 81 Query: 352 LDGLNFNGRKIRVTMVEERPRRQF 281 +G F GR +RV PR F Sbjct: 82 FNGYTFQGRPLRVNSGPPPPRDDF 105 >sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia] Length = 279 Score = 191 bits (486), Expect = 2e-46 Identities = 99/153 (64%), Positives = 117/153 (76%), Gaps = 9/153 (5%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPS--------QGVRT 557 SRGFGFVTMS+ +EV+AA QQ NGYEL+GR LRVN GPPP K ++ S G R Sbjct: 127 SRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRG 186 Query: 556 GASVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQ 377 G S + N+VYVGNL+WGVD L TLFSEQG+V +AKV+ DR+SGRSRGFGFVTYSSA+ Sbjct: 187 GGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAE 246 Query: 376 EVNNAVSSLDGLNFNGRKIRVTMVEER-PRRQF 281 EVNNA+ SLDG++ NGR IRV+ E R PRRQF Sbjct: 247 EVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279 Score = 67.4 bits (163), Expect = 5e-09 Identities = 35/86 (40%), Positives = 50/86 (58%) Frame = -3 Query: 571 QGVRTGASVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVT 392 +GV + + +++VGNL + D + L LF G V +VI D+ +GRSRGFGFVT Sbjct: 75 EGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVT 134 Query: 391 YSSAQEVNNAVSSLDGLNFNGRKIRV 314 SS +EV A +G +GR +RV Sbjct: 135 MSSKEEVEAACQQFNGYELDGRALRV 160 >ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis sativus] Length = 278 Score = 191 bits (485), Expect = 2e-46 Identities = 96/146 (65%), Positives = 117/146 (80%), Gaps = 2/146 (1%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 536 SRGFGFVTMSTV EV+AAAQQ NGYEL+GR LRVNYGPPP +++DS +G R + + R Sbjct: 133 SRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRFDNR 192 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N+V+V NL+WGVDD L LF E+G V EAKV+ DR+SG+SRGFGFVTY+SA+EVN A+ Sbjct: 193 NRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQ 252 Query: 355 SLDGLNFNGRKIRVTMVEER-PRRQF 281 SLDG++ +GR IRVT E R PRRQF Sbjct: 253 SLDGVDLDGRPIRVTQAEARPPRRQF 278 Score = 69.3 bits (168), Expect = 1e-09 Identities = 35/82 (42%), Positives = 49/82 (59%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +++VGNL + VD + L LF G+V +VI D+ +GRSRGFGFVT S+ EV A Sbjct: 94 KLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQ 153 Query: 352 LDGLNFNGRKIRVTMVEERPRR 287 +G +GR +RV P+R Sbjct: 154 FNGYELDGRLLRVNYGPPPPKR 175 >ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor] gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor] Length = 268 Score = 189 bits (481), Expect = 6e-46 Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 7/151 (4%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS----- 548 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP +++S + R G Sbjct: 118 SRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDESAPRAPRGGGGGGGGG 177 Query: 547 --VNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQE 374 V+ N+VYVGNL+WGVD+S L LFSEQG+V +AKVI DRESGRSRGFGFVTY +A E Sbjct: 178 SFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGTAAE 237 Query: 373 VNNAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 VNNA+S+LDG++ +GR+IRVT+ E +PRRQF Sbjct: 238 VNNAISNLDGIDLDGRQIRVTVAESKPRRQF 268 Score = 78.6 bits (192), Expect = 2e-12 Identities = 52/149 (34%), Positives = 70/149 (46%), Gaps = 13/149 (8%) Frame = -3 Query: 697 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGRNQ---- 530 F+ +S+ K AA + L PLR P R + + V + G Q Sbjct: 14 FLALSSAKPAAPAASAFLPFRL---PLRAVSAPGRRVFEPVAVAVSSEYETEGAEQEEEG 70 Query: 529 ---------VYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQ 377 ++VGNL + VD + L LF + G V +V+ DR +GRSRGFGFVT SSA+ Sbjct: 71 AEEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAE 130 Query: 376 EVNNAVSSLDGLNFNGRKIRVTMVEERPR 290 E AV +G F GR +RV PR Sbjct: 131 EAGAAVEQFNGYTFQGRPLRVNCGPPPPR 159 >ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays] gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays] Length = 268 Score = 189 bits (481), Expect = 6e-46 Identities = 93/150 (62%), Positives = 116/150 (77%), Gaps = 6/150 (4%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGAS----- 548 SRGFGFVTMS+ +E +AA +Q NGY +GR LRVN GPPP +++S + R G Sbjct: 119 SRGFGFVTMSSAEEAEAAVEQFNGYAFQGRQLRVNCGPPPPRDESTPRAPRGGGGGGGGG 178 Query: 547 -VNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEV 371 V+ N+VYVGNL+WGVD+S L LFSEQG+V +AKVI DR+SGRSRGFGFVTY SAQEV Sbjct: 179 FVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSAQEV 238 Query: 370 NNAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 NNA+S+LDG++ +GR+IRVT E +PRRQF Sbjct: 239 NNAISNLDGIDLDGRQIRVTAAESKPRRQF 268 Score = 77.0 bits (188), Expect = 6e-12 Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 11/147 (7%) Frame = -3 Query: 697 FVTMSTVKEVKAAAQQLNGYELEGR-----------PLRVNYGPPPRKEDSPSQGVRTGA 551 F+ +S+ K AA + L R P+ V + E + +G Sbjct: 14 FLALSSPKPAAPAATAFLPFRLPPRAVSAPGRRVFEPVAVAVSSEYKTEGAEQEGEDGSE 73 Query: 550 SVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEV 371 + +++VGNL + VD + L LF + G V +V+ DR +GRSRGFGFVT SSA+E Sbjct: 74 EFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEA 133 Query: 370 NNAVSSLDGLNFNGRKIRVTMVEERPR 290 AV +G F GR++RV PR Sbjct: 134 EAAVEQFNGYAFQGRQLRVNCGPPPPR 160 >ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 280 Score = 189 bits (479), Expect = 1e-45 Identities = 96/149 (64%), Positives = 115/149 (77%), Gaps = 5/149 (3%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQGVRTGASVNGR- 536 SRGFGFVTMS++ EV+AAAQQ NGYELEGR LRVN GPPP++E S S+ R G G Sbjct: 132 SRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGE 191 Query: 535 ----NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVN 368 N++YVGNLSW VD+ L + FSEQG+V +AKV+ DRESGRSRGFGFVTYSSA+EV Sbjct: 192 SLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVE 251 Query: 367 NAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 NA+ SL+G +GR IRV++ E RPRRQF Sbjct: 252 NAIDSLNGAELDGRAIRVSVAEARPRRQF 280 Score = 68.9 bits (167), Expect = 2e-09 Identities = 39/93 (41%), Positives = 53/93 (56%) Frame = -3 Query: 592 RKEDSPSQGVRTGASVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRS 413 ++ED S G + S + + ++VGNL + VD + L LF G V +VI D+ +GRS Sbjct: 75 QEEDVSSDGDESSFSQDLK--LFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRS 132 Query: 412 RGFGFVTYSSAQEVNNAVSSLDGLNFNGRKIRV 314 RGFGFVT SS EV A +G GR +RV Sbjct: 133 RGFGFVTMSSIDEVEAAAQQFNGYELEGRALRV 165 >ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial [Oryza brachyantha] Length = 211 Score = 188 bits (478), Expect = 1e-45 Identities = 95/145 (65%), Positives = 113/145 (77%), Gaps = 1/145 (0%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPP-RKEDSPSQGVRTGASVNGR 536 SRGFGFVTMS+ +E AA +Q NGY +GRPLRVN GPPP R E SP G + + Sbjct: 67 SRGFGFVTMSSSEEAGAAVEQFNGYTFQGRPLRVNSGPPPARDEFSPRPPRGGGNNFDSS 126 Query: 535 NQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVS 356 N+VYVGNLSWGVD+S L LFSEQG V +AKVI DRESGRSRGFGFVTY SA+EV NA+S Sbjct: 127 NKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFVTYGSAEEVTNAIS 186 Query: 355 SLDGLNFNGRKIRVTMVEERPRRQF 281 +LDG++ +GR+IRVT+ E +PRRQF Sbjct: 187 NLDGVDLDGRQIRVTVAESKPRRQF 211 Score = 76.3 bits (186), Expect = 1e-11 Identities = 38/84 (45%), Positives = 52/84 (61%) Frame = -3 Query: 532 QVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAVSS 353 +V+VGNL + VD + L LF + G V +V+ DR++GRSRGFGFVT SS++E AV Sbjct: 28 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSSSEEAGAAVEQ 87 Query: 352 LDGLNFNGRKIRVTMVEERPRRQF 281 +G F GR +RV R +F Sbjct: 88 FNGYTFQGRPLRVNSGPPPARDEF 111 >ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 286 Score = 188 bits (478), Expect = 1e-45 Identities = 94/156 (60%), Positives = 120/156 (76%), Gaps = 12/156 (7%) Frame = -3 Query: 712 SRGFGFVTMSTVKEVKAAAQQLNGYELEGRPLRVNYGPPPRKEDSPSQ------------ 569 SRGFGFVTMST++EV+AA+QQ NGYEL+GRPLRVN GPPP++E S S+ Sbjct: 131 SRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGP 190 Query: 568 GVRTGASVNGRNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTY 389 G R G + + N+VYVGNLSW VDDS L +LF E+G+V +AKV+ DR+SGRS+GFGFVTY Sbjct: 191 GARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGRSKGFGFVTY 250 Query: 388 SSAQEVNNAVSSLDGLNFNGRKIRVTMVEERPRRQF 281 SSA+EV +AV SL+G +GR IRV++ E +PRR+F Sbjct: 251 SSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRRF 286 Score = 65.9 bits (159), Expect = 1e-08 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 7/135 (5%) Frame = -3 Query: 697 FVTMSTVKEVKAAAQQLNGYELEGRPLRVNY-------GPPPRKEDSPSQGVRTGASVNG 539 F+++S+ +K A+ L+ + + +PL + ++ED G S + Sbjct: 32 FLSLSSTSSIKPASLFLSFQQKQQQPLSSRFLKSVAISSEFGQEEDVFGDGDEPSFSPD- 90 Query: 538 RNQVYVGNLSWGVDDSDLGTLFSEQGRVFEAKVILDRESGRSRGFGFVTYSSAQEVNNAV 359 Q++VGNL + V+ + L LF G V +V D+ +GRSRGFGFVT S+ +EV A Sbjct: 91 -LQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAAS 149 Query: 358 SSLDGLNFNGRKIRV 314 +G +GR +RV Sbjct: 150 QQFNGYELDGRPLRV 164