BLASTX nr result
ID: Akebia24_contig00013849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00013849
(520 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35966.3| unnamed protein product [Vitis vinifera] 189 3e-46
ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [A... 129 4e-28
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S... 128 9e-28
ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide r... 125 8e-27
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr... 123 3e-26
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 122 4e-26
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citr... 122 7e-26
ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat... 122 7e-26
ref|XP_006585977.1| PREDICTED: pentatricopeptide repeat-containi... 121 9e-26
ref|XP_006585975.1| PREDICTED: pentatricopeptide repeat-containi... 121 9e-26
ref|XP_006586553.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,... 120 3e-25
gb|EEC71699.1| hypothetical protein OsI_04200 [Oryza sativa Indi... 120 3e-25
gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japo... 120 3e-25
ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group] g... 120 3e-25
ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 189 bits (480), Expect = 3e-46
Identities = 94/163 (57%), Positives = 118/163 (72%)
Frame = -2
Query: 489 MLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLTKLVDLRSIDHARAVFNQIASPTDYS 310
MLL LLR++ +LT HG P HL+ KL+DL SID+AR V +Q SPTD+S
Sbjct: 1 MLLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFS 60
Query: 309 WNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVV 130
WNSLIR YT++ SPQ+SLFLY KMLR++ KPSNFT+P V KACS L ++ +GEQIHTHV+
Sbjct: 61 WNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVL 120
Query: 129 KFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
+ GF SDLFV NSLIDMYCKC R + + +D + R+ VSWN
Sbjct: 121 RLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWN 163
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/140 (28%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Frame = -2
Query: 408 PHHNHLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSK 241
P + L+T L+D+ S ++ A +F+ ++ SWN++I G ++++ LY
Sbjct: 260 PLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRH 319
Query: 240 MLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGR 61
M +VKP+ T +V AC+ L A++ G ++H ++ + G ++ + +L+DMY KCG+
Sbjct: 320 MKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGK 379
Query: 60 TEDGHHVFDSILQRNVVSWN 1
+D +F +++V WN
Sbjct: 380 IDDACLIFVKTSEKDVALWN 399
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDY-SWNSLIRGYTLNDSPQDSLFLYSKMLRTA- 226
N +++ V ++ AR +F ++ + W ++I GY + L L+ +ML +A
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222
Query: 225 -VKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDG 49
V+P+ T + ACS L + G + + + + +LIDMY KCG E
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKA 282
Query: 48 HHVFDSILQRNVVSWN 1
+FD + +N+ SWN
Sbjct: 283 WRIFDGVSCKNLPSWN 298
>ref|XP_006841470.1| hypothetical protein AMTR_s00003p00103190 [Amborella trichopoda]
gi|548843491|gb|ERN03145.1| hypothetical protein
AMTR_s00003p00103190 [Amborella trichopoda]
Length = 297
Score = 129 bits (324), Expect = 4e-28
Identities = 60/144 (41%), Positives = 97/144 (67%), Gaps = 6/144 (4%)
Frame = -2
Query: 414 GFPHHNHLLTKLVDL------RSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLF 253
G +N L+ LV ++++ARAVFNQ+ P + WN++IRG + N++ ++++
Sbjct: 119 GLSQNNFLMASLVKFCAEPTSGNLNYARAVFNQLKDPHPFIWNTMIRGCSENNALEEAIL 178
Query: 252 LYSKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYC 73
Y M++ V+P+NFT+PSVFKAC+ + A+K+GEQ+HTHV+K G +S V++S+I MY
Sbjct: 179 FYCTMVQEDVQPNNFTFPSVFKACNGIKALKEGEQVHTHVIKHGLMSYGHVHSSMIQMYG 238
Query: 72 KCGRTEDGHHVFDSILQRNVVSWN 1
CG+ + +FD I + +VVSWN
Sbjct: 239 SCGQLPNARRLFDRIHEPDVVSWN 262
>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein
SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 128 bits (321), Expect = 9e-28
Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Frame = -2
Query: 495 PSMLLPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLTKLVDLRSIDH-----ARAVFNQI 331
P + L + RS V + G + + ++K++ ++ A VF QI
Sbjct: 311 PGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQI 370
Query: 330 ASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDAIKQGE 151
SPT + WN+L+RG +D+P+D++ Y K +KP N T+P V KAC+ A K+GE
Sbjct: 371 ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGE 430
Query: 150 QIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
Q+H+HV+K GFL D+FV+NSLI +Y CG +FD +L ++VVSWN
Sbjct: 431 QMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWN 480
Score = 87.8 bits (216), Expect = 1e-15
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++T I++AR +F+Q+ SW LI GYT +++ L+ M+ +
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGIS 69
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
PS T +V A S L I GE +H + VK G +SD V NSLID+Y K G ++ V
Sbjct: 70 PSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 129
Query: 39 FDSIL-QRNVVSW 4
FD +L +RN+VSW
Sbjct: 130 FDEMLDRRNLVSW 142
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/118 (36%), Positives = 67/118 (56%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A+ +F+QI + SW+S+I Y+ DSL L+ +M R VKP SV AC+
Sbjct: 596 AKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAH 655
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
L A+ G+ IH +V + +D + NSLIDM+ KCG ++ VF + +++ +SWN
Sbjct: 656 LGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWN 713
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/118 (27%), Positives = 60/118 (50%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
AR++F+++ SWNSLI GY+ + ++ L L+ M V+ T V AC+
Sbjct: 464 ARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTH 523
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
L + + ++ + D+++ N+LID YC+ G+ + VF + +N V+ N
Sbjct: 524 LGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLN 581
>ref|XP_004512460.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cicer arietinum]
Length = 606
Score = 125 bits (313), Expect = 8e-27
Identities = 59/122 (48%), Positives = 82/122 (67%)
Frame = -2
Query: 366 SIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFK 187
S+D+A ++F QI P + +N++IRG N ++L LY +ML ++P FTYP V K
Sbjct: 80 SMDYACSIFTQIEEPCSFDYNTMIRGNVNNMKLDEALLLYVEMLERGIEPDKFTYPFVLK 139
Query: 186 ACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVS 7
ACS+L A+K+G QIH HV+K G DLFV NSLI+MY KCG +D VFD + +R+V S
Sbjct: 140 ACSLLGALKEGVQIHGHVLKTGLEGDLFVENSLINMYGKCGAIKDACDVFDKMGERSVAS 199
Query: 6 WN 1
W+
Sbjct: 200 WS 201
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTA-- 226
N L+ +I A VF+++ + SW+++I + + + L L M+ +
Sbjct: 170 NSLINMYGKCGAIKDACDVFDKMGERSVASWSAIIGAHVCVEMWHECLVLLGDMMSSEGR 229
Query: 225 VKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGH 46
+P T SV AC+ L + G IH ++++ ++ V SLIDMY KCG E G
Sbjct: 230 CRPEESTLVSVLSACTHLGSYNLGRFIHGNLLRNISELNVVVKTSLIDMYVKCGCLEKGL 289
Query: 45 HVFDSILQRNVVSW 4
HVF ++ ++N S+
Sbjct: 290 HVFRNMPEKNRYSY 303
>tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 125 bits (313), Expect = 8e-27
Identities = 60/143 (41%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
Frame = -2
Query: 414 GFPHHNHLLTKLVDLRSIDH-----ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFL 250
G + + ++K++ L ++ A VF QI SPT + WN+L+RG +D+P+D++
Sbjct: 868 GLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVF 927
Query: 249 YSKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCK 70
Y K +KP N T+P V KAC+ A K+GEQ+H HV+K GFL D+FV+NSLI +Y
Sbjct: 928 YKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAA 987
Query: 69 CGRTEDGHHVFDSILQRNVVSWN 1
CG VF+ +L ++VVSWN
Sbjct: 988 CGALACARSVFNEMLVKDVVSWN 1010
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/133 (33%), Positives = 73/133 (54%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++T ++ A+ +F+QI + SW+S+I Y+ DSL L+ +M R VK
Sbjct: 1111 NAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVK 1170
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
P SV AC+ L A+ G+ IH +V + +D + NSLIDM+ KCG ++ V
Sbjct: 1171 PDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQV 1230
Query: 39 FDSILQRNVVSWN 1
F + +++ +SWN
Sbjct: 1231 FTDMEEKDTLSWN 1243
Score = 82.8 bits (203), Expect = 5e-14
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++T +++AR +F+Q+ SW LI GYT ++L L M+ +
Sbjct: 549 NVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGIS 608
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
PS T +V A S L I GE ++ + K G +SD V NSLID+Y K G ++ V
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 668
Query: 39 FDSIL-QRNVVSW 4
FD +L +RN+VSW
Sbjct: 669 FDEMLDRRNLVSW 681
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/118 (29%), Positives = 60/118 (50%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
AR+VFN++ SWNSLI GY+ ++ ++ L L+ M V+ T V AC+
Sbjct: 994 ARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTH 1053
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
L + + ++ D+++ N+LID YC+ G+ + VF + +N V+ N
Sbjct: 1054 LGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLN 1111
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/118 (32%), Positives = 61/118 (51%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A VF+Q +P W + ++ Y+ P ++L L+ K R + F + V KAC+
Sbjct: 437 ALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLF-KHARQHLADDTFVFTFVLKACAG 491
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
L + G Q+H VV+ GF +V+ +LI++Y + VFD + +NVVSWN
Sbjct: 492 LGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWN 549
>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
gi|557549465|gb|ESR60094.1| hypothetical protein
CICLE_v10018065mg [Citrus clementina]
Length = 438
Score = 123 bits (308), Expect = 3e-26
Identities = 68/164 (41%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Frame = -2
Query: 483 LPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLTKLVDLRSI----DHARAVFNQIASPTD 316
L LLR N HG + L+ KL+DL S DHA VF+QI P
Sbjct: 34 LVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHV 93
Query: 315 YSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTH 136
++WN +IR T+N S + +L LY+ M+ +P FT+P VFKAC AI++G+++H
Sbjct: 94 FTWNLMIRALTINGSSRQALLLYNLMICNGFRPDKFTFPFVFKACITSLAIEKGKEVHGL 153
Query: 135 VVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
VK GF D+FV N+L+D+Y KCG G VFD + R+VVSW
Sbjct: 154 AVKAGFSRDMFVQNTLMDLYFKCGDVNGGRKVFDKMRVRSVVSW 197
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/131 (35%), Positives = 76/131 (58%)
Frame = -2
Query: 393 LLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPS 214
+++ L +D AR VF Q+ + SW ++I Y N+ ++ L+ +ML V+P+
Sbjct: 200 MISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNVRPN 259
Query: 213 NFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFD 34
FT S+ +AC+ L ++K G IH +K GF+ +++ +LIDMY KCG ED VFD
Sbjct: 260 EFTLVSLLQACTELGSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFD 319
Query: 33 SILQRNVVSWN 1
+ +N+ +WN
Sbjct: 320 KMEIKNLATWN 330
>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568829286|ref|XP_006468954.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568829288|ref|XP_006468955.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 435
Score = 122 bits (307), Expect = 4e-26
Identities = 68/164 (41%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Frame = -2
Query: 483 LPLLRSSVNLTXXXXXXXXXXXHGFPHHNHLLTKLVDLRSI----DHARAVFNQIASPTD 316
L LLR N HG + L+ KL+DL S DHA VF+QI P
Sbjct: 34 LVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHV 93
Query: 315 YSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTH 136
++WN +IR T+N S Q +L LY+ M+ +P FT+P V KAC AI++G+++H
Sbjct: 94 FTWNLMIRALTINGSSQQALLLYNLMICNGFRPDKFTFPFVIKACVASLAIEKGKEVHGL 153
Query: 135 VVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
VK GF D+FV N+L+D+Y KCG + G VFD + R+VVSW
Sbjct: 154 AVKAGFSRDMFVQNTLMDLYFKCGDVDGGRMVFDKMRVRSVVSW 197
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/131 (35%), Positives = 77/131 (58%)
Frame = -2
Query: 393 LLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPS 214
+++ L +D AR VF Q+ + SW ++I Y N+ Q++ L+ +ML V+P+
Sbjct: 200 MISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAQEAFELFQRMLLDNVRPN 259
Query: 213 NFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFD 34
FT S+ +AC+ L ++K G IH +K GF+ +++ +LIDMY KCG ED VFD
Sbjct: 260 EFTLVSLLQACTELRSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFD 319
Query: 33 SILQRNVVSWN 1
+ +N+ +WN
Sbjct: 320 KMEIKNLATWN 330
>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 122 bits (307), Expect = 4e-26
Identities = 64/142 (45%), Positives = 85/142 (59%), Gaps = 4/142 (2%)
Frame = -2
Query: 414 GFPHHNHLLTKLVDLRSIDH----ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLY 247
G ++ L TKLV L ++ + AR +F++I + WN LIRGY N +++ LY
Sbjct: 77 GIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILY 136
Query: 246 SKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 67
KML ++P NFT P V KACS L AI +G IH +V+K G+ DLFV +LIDMY KC
Sbjct: 137 HKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKC 196
Query: 66 GRTEDGHHVFDSILQRNVVSWN 1
G D VFD I+ R+ V WN
Sbjct: 197 GCVMDAGRVFDKIVVRDAVLWN 218
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/118 (32%), Positives = 62/118 (52%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A VF++I WNS++ Y N P +S+ L +M V+P+ T +V + +
Sbjct: 202 AGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSAD 261
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
+ + G +IH + GF S+ V +LIDMY KCG + +F+ + ++ VVSWN
Sbjct: 262 VACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWN 319
>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 608
Score = 122 bits (306), Expect = 5e-26
Identities = 59/141 (41%), Positives = 94/141 (66%), Gaps = 7/141 (4%)
Frame = -2
Query: 405 HHNHLL--TKLVDLR-----SIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLY 247
+H +LL TK+V L ++D+AR +F+Q+ ++WN+LIRGY+ Q+S+FLY
Sbjct: 61 YHKNLLICTKIVSLGCFLSPTMDYARKLFDQMPQRDVFAWNTLIRGYSNLGPCQESIFLY 120
Query: 246 SKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 67
+M + P N+T+P V ++CS+L A+++G +IH +++K GF SD+FV +SLI +Y +
Sbjct: 121 KEMHLQGILPDNYTFPFVLRSCSVLSALREGREIHCNIIKHGFESDVFVQSSLITLYAQS 180
Query: 66 GRTEDGHHVFDSILQRNVVSW 4
G T D VFD + RN+VSW
Sbjct: 181 GETLDSELVFDQMRVRNIVSW 201
Score = 83.2 bits (204), Expect = 4e-14
Identities = 44/121 (36%), Positives = 67/121 (55%)
Frame = -2
Query: 363 IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKA 184
+D A ++F+Q+ + SWN++I Y ND + L+ +ML V+ T +V A
Sbjct: 284 VDVAWSLFDQMKEHSVVSWNAIIAAYEQNDVGSSPIKLFHRMLGQGVEFDYITVVTVISA 343
Query: 183 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
C+ L A+ G+ IH V G ++ + N+LIDMY KCG E VFD + R+VVSW
Sbjct: 344 CARLGALGTGKWIHELVKSKGLECNVPITNALIDMYAKCGSIESARDVFDRLPSRSVVSW 403
Query: 3 N 1
+
Sbjct: 404 S 404
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/115 (34%), Positives = 64/115 (55%)
Frame = -2
Query: 345 VFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDA 166
VF+Q+ SW ++I GY N P+ L ++ KM+ + P+ T SV AC+ LD
Sbjct: 189 VFDQMRVRNIVSWTAMIAGYVQNGIPEKGLGVFLKMVDSGTLPNAITLVSVLPACARLDC 248
Query: 165 IKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
+ G IH + +K G +D+ + N+L+ Y KCG + +FD + + +VVSWN
Sbjct: 249 LDLGMLIHGYSIKLGVETDVSLVNALVAFYGKCGLVDVAWSLFDQMKEHSVVSWN 303
>ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citrus clementina]
gi|568834767|ref|XP_006471474.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Citrus sinensis]
gi|557534799|gb|ESR45917.1| hypothetical protein
CICLE_v10000638mg [Citrus clementina]
Length = 605
Score = 122 bits (305), Expect = 7e-26
Identities = 57/122 (46%), Positives = 85/122 (69%)
Frame = -2
Query: 366 SIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFK 187
S+D+A ++F QI P + +NSLIRG+ + +++LFLY++M V+P +FT+P++FK
Sbjct: 80 SMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFK 139
Query: 186 ACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVS 7
AC+ L A+K+G QIH HV K GF DLFV NSLI+MY KC + E +F + Q++V S
Sbjct: 140 ACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
Query: 6 WN 1
W+
Sbjct: 200 WS 201
Score = 56.6 bits (135), Expect = 4e-06
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKM-LRTAV 223
N L+ ++ A A+F Q+ + SW+++I + N + L L+ +M
Sbjct: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNSEKCW 229
Query: 222 KPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHH 43
+P SV AC+ L A+ G+ H +++ ++ V SLIDMY KCG E G
Sbjct: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
Query: 42 VFDSILQRN 16
+F + +++
Sbjct: 290 LFRMMAEKS 298
>ref|XP_004486752.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cicer arietinum]
Length = 615
Score = 122 bits (305), Expect = 7e-26
Identities = 64/142 (45%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Frame = -2
Query: 414 GFPHHNHLLTKLVDLRSIDH----ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLY 247
G P++ +L TKLV L S+ + A +F++I + WN LIRGY N ++ LY
Sbjct: 72 GLPYNQNLATKLVHLYSVSNSLINAHNLFDKIPKGNLFLWNVLIRGYAWNGPHDAAISLY 131
Query: 246 SKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 67
ML +KP NFT P V KACS L A+ +G++IH +V+K G+ D+FV +LIDMY KC
Sbjct: 132 HDMLDYELKPDNFTLPFVLKACSALSAVGEGKRIHEYVIKNGWERDVFVGAALIDMYAKC 191
Query: 66 GRTEDGHHVFDSILQRNVVSWN 1
G D +VFD IL R+ V WN
Sbjct: 192 GCVIDARYVFDKILVRDDVLWN 213
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/118 (36%), Positives = 65/118 (55%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
AR VF++I D WNS++ Y N P +SL L +M T V+P+ T +V + +
Sbjct: 197 ARYVFDKILVRDDVLWNSMLAAYAQNGHPDESLSLCREMAATGVRPTEATLVTVISSSAD 256
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
+ + G +IH K GF S+ V +LIDMY KCG + +FD + ++ V+SWN
Sbjct: 257 IACLPNGREIHGFSWKHGFQSNDKVKTALIDMYAKCGYVKVARALFDRLREKRVISWN 314
>ref|XP_006585977.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like isoform X3 [Glycine max]
Length = 749
Score = 121 bits (304), Expect = 9e-26
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Frame = -2
Query: 405 HHNHLLTKL----VDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKM 238
++ H+L L V ++HAR VF +I P+ WN +IR Y N S+ LY +M
Sbjct: 39 NNTHILDNLTRFHVARNQVEHARHVFEKIPKPSVVLWNMMIRAYAWNGPFLQSIHLYHRM 98
Query: 237 LRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRT 58
L+ V P+NFT+P V KACS L AI+ G QIH H + G +D++V+ +L+DMY KCG
Sbjct: 99 LQLGVTPTNFTFPFVLKACSALQAIQVGRQIHGHALTLGLQTDVYVSTALLDMYAKCGDL 158
Query: 57 EDGHHVFDSILQRNVVSWN 1
+ H +FD + R++V+WN
Sbjct: 159 FEAHTMFDIMTHRDLVAWN 177
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Frame = -2
Query: 411 FPHHNHLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYS 244
F H + T L+D+ + + +AR +F+ + + W+++I GY + DS +D+L LY
Sbjct: 239 FSHDVVVATGLLDMYAKCHHLSYARKIFDTVNQKNEICWSAMIGGYVICDSMRDALALYD 298
Query: 243 KMLRT-AVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 67
M+ + P T S+ +AC+ L + +G+ +H +++K G SD V NSLI MY KC
Sbjct: 299 DMVYMHGLSPMPATLASILRACAKLTDLNKGKNLHCYMIKSGISSDTTVGNSLISMYAKC 358
Query: 66 GRTEDGHHVFDSILQRNVVSWN 1
G +D D ++ ++ VS++
Sbjct: 359 GIIDDSLGFLDEMITKDTVSYS 380
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/133 (27%), Positives = 69/133 (51%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N L++ ID + +++ + S++++I G N + ++ ++ +M +
Sbjct: 349 NSLISMYAKCGIIDDSLGFLDEMITKDTVSYSAIISGCVQNGYAEKAILIFRQMQLSGTD 408
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
P + T + ACS L A++ G H + V GF + + N++IDMY KCG+ V
Sbjct: 409 PDSATMIGLLPACSHLAALQHGACCHGYSVIRGFTENTSICNAIIDMYAKCGKIHISRQV 468
Query: 39 FDSILQRNVVSWN 1
FD + +R++VSWN
Sbjct: 469 FDRMKKRDIVSWN 481
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Frame = -2
Query: 396 HLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRT 229
++ T L+D+ + + A +F+ + +WN++I G++L+ ++ L +M +
Sbjct: 143 YVSTALLDMYAKCGDLFEAHTMFDIMTHRDLVAWNAIIAGFSLHVLHNQTIHLVVQMQQA 202
Query: 228 AVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDG 49
+ P++ T SV +A+ QG+ IH + ++ F D+ V L+DMY KC
Sbjct: 203 GITPNSSTVVSVLPTVGQANALHQGKAIHAYSIRKIFSHDVVVATGLLDMYAKCHHLSYA 262
Query: 48 HHVFDSILQRNVVSWN 1
+FD++ Q+N + W+
Sbjct: 263 RKIFDTVNQKNEICWS 278
>ref|XP_006585975.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like isoform X1 [Glycine max]
gi|571473624|ref|XP_006585976.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16610-like isoform X2 [Glycine max]
Length = 783
Score = 121 bits (304), Expect = 9e-26
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Frame = -2
Query: 405 HHNHLLTKL----VDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKM 238
++ H+L L V ++HAR VF +I P+ WN +IR Y N S+ LY +M
Sbjct: 39 NNTHILDNLTRFHVARNQVEHARHVFEKIPKPSVVLWNMMIRAYAWNGPFLQSIHLYHRM 98
Query: 237 LRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRT 58
L+ V P+NFT+P V KACS L AI+ G QIH H + G +D++V+ +L+DMY KCG
Sbjct: 99 LQLGVTPTNFTFPFVLKACSALQAIQVGRQIHGHALTLGLQTDVYVSTALLDMYAKCGDL 158
Query: 57 EDGHHVFDSILQRNVVSWN 1
+ H +FD + R++V+WN
Sbjct: 159 FEAHTMFDIMTHRDLVAWN 177
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Frame = -2
Query: 411 FPHHNHLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYS 244
F H + T L+D+ + + +AR +F+ + + W+++I GY + DS +D+L LY
Sbjct: 239 FSHDVVVATGLLDMYAKCHHLSYARKIFDTVNQKNEICWSAMIGGYVICDSMRDALALYD 298
Query: 243 KMLRT-AVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 67
M+ + P T S+ +AC+ L + +G+ +H +++K G SD V NSLI MY KC
Sbjct: 299 DMVYMHGLSPMPATLASILRACAKLTDLNKGKNLHCYMIKSGISSDTTVGNSLISMYAKC 358
Query: 66 GRTEDGHHVFDSILQRNVVSWN 1
G +D D ++ ++ VS++
Sbjct: 359 GIIDDSLGFLDEMITKDTVSYS 380
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/133 (27%), Positives = 69/133 (51%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N L++ ID + +++ + S++++I G N + ++ ++ +M +
Sbjct: 349 NSLISMYAKCGIIDDSLGFLDEMITKDTVSYSAIISGCVQNGYAEKAILIFRQMQLSGTD 408
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
P + T + ACS L A++ G H + V GF + + N++IDMY KCG+ V
Sbjct: 409 PDSATMIGLLPACSHLAALQHGACCHGYSVIRGFTENTSICNAIIDMYAKCGKIHISRQV 468
Query: 39 FDSILQRNVVSWN 1
FD + +R++VSWN
Sbjct: 469 FDRMKKRDIVSWN 481
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Frame = -2
Query: 396 HLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRT 229
++ T L+D+ + + A +F+ + +WN++I G++L+ ++ L +M +
Sbjct: 143 YVSTALLDMYAKCGDLFEAHTMFDIMTHRDLVAWNAIIAGFSLHVLHNQTIHLVVQMQQA 202
Query: 228 AVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDG 49
+ P++ T SV +A+ QG+ IH + ++ F D+ V L+DMY KC
Sbjct: 203 GITPNSSTVVSVLPTVGQANALHQGKAIHAYSIRKIFSHDVVVATGLLDMYAKCHHLSYA 262
Query: 48 HHVFDSILQRNVVSWN 1
+FD++ Q+N + W+
Sbjct: 263 RKIFDTVNQKNEICWS 278
>ref|XP_006586553.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Glycine max]
Length = 439
Score = 121 bits (303), Expect = 1e-25
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 4/139 (2%)
Frame = -2
Query: 405 HHNHLLTKL----VDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKM 238
++ H+L L V ++HAR VF +I P+ WN +IR Y ND S+ LY +M
Sbjct: 39 NNTHILDNLTRFHVARNQVEHARHVFEKIPKPSVVLWNMMIRAYAWNDPFLQSIHLYHRM 98
Query: 237 LRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRT 58
L+ V P+NFT+P V KACS L AI+ G QIH H + G +D++V+ +L+DMY KCG
Sbjct: 99 LQLGVTPTNFTFPFVLKACSALQAIQVGRQIHGHALTLGLQTDVYVSTALLDMYAKCGDL 158
Query: 57 EDGHHVFDSILQRNVVSWN 1
+ +FD + R++V+WN
Sbjct: 159 FEAQTMFDIMTHRDLVAWN 177
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/142 (31%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Frame = -2
Query: 411 FPHHNHLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYS 244
F H + T L+D+ + + +AR +F+ + + W+++I GY + DS +D+L LY
Sbjct: 239 FSHDVVVATGLLDMYAKCHHLSYARKIFDTVNQKNEICWSAMIGGYVICDSMRDALALYD 298
Query: 243 KMLRT-AVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKC 67
M+ + P T S+ +AC+ L + +G+ +H +++K G SD V NSLI MY KC
Sbjct: 299 DMVYMHGLSPMPATLASILRACAKLTDLNKGKNLHCYMIKSGISSDTTVGNSLISMYAKC 358
Query: 66 GRTEDGHHVFDSILQRNVVSWN 1
G +D D ++ +++VS++
Sbjct: 359 GIIDDSLGFLDEMITKDIVSYS 380
Score = 68.9 bits (167), Expect = 7e-10
Identities = 36/136 (26%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Frame = -2
Query: 396 HLLTKLVDLRS----IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRT 229
++ T L+D+ + + A+ +F+ + +WN++I G++L+ ++ L +M +
Sbjct: 143 YVSTALLDMYAKCGDLFEAQTMFDIMTHRDLVAWNAIIAGFSLHVLHNQTIHLVVQMQQA 202
Query: 228 AVKPSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDG 49
+ P++ T SV +A+ QG+ IH + V+ F D+ V L+DMY KC
Sbjct: 203 GITPNSSTVVSVLPTVGQANALHQGKAIHAYSVRKIFSHDVVVATGLLDMYAKCHHLSYA 262
Query: 48 HHVFDSILQRNVVSWN 1
+FD++ Q+N + W+
Sbjct: 263 RKIFDTVNQKNEICWS 278
>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 2000
Score = 120 bits (300), Expect = 3e-25
Identities = 52/131 (39%), Positives = 88/131 (67%)
Frame = -2
Query: 393 LLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPS 214
+L V++ + AR +F+++ + SW+++I Y + P++SL L+ +M++ KP+
Sbjct: 256 ILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPN 315
Query: 213 NFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFD 34
+ S+ A + ++A++ G IH HV K GF D+FV++SLIDMYCKCG T+DG +FD
Sbjct: 316 ISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFD 375
Query: 33 SILQRNVVSWN 1
+IL++N+VSWN
Sbjct: 376 TILEKNMVSWN 386
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Frame = -2
Query: 402 HNHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRG---------------------- 289
HN +++ V ++D AR +F+++ + SW +LI G
Sbjct: 90 HNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNV 149
Query: 288 ---------YTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDAIKQGEQIHTH 136
Y N +++ L+ K+L + VKP+ T+ SV +AC+ L G +
Sbjct: 150 VSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGL 209
Query: 135 VVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
+VK G+ DL V+NSLI + + G VFD + +++VVSW
Sbjct: 210 IVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSW 253
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/120 (27%), Positives = 66/120 (55%)
Frame = -2
Query: 363 IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKA 184
++ A+ +FN + + SW+++I G+ + + ++++M+ P+ T+ S+ A
Sbjct: 398 MEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCA 457
Query: 183 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
C+ ++ +G+ +H +VK G D +V +L DMY K G E VF+ + ++N VSW
Sbjct: 458 CASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSW 517
>gb|EEC71699.1| hypothetical protein OsI_04200 [Oryza sativa Indica Group]
Length = 338
Score = 120 bits (300), Expect = 3e-25
Identities = 53/118 (44%), Positives = 77/118 (65%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A VF+QI +PT + WN LIRG +D+P D++ Y K + P N T+P + KAC+
Sbjct: 18 AHKVFDQIKAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 77
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
++A+ +GEQ+H H+ K G LSD+FV+NSLI +Y CG VFD ++ ++VVSWN
Sbjct: 78 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN 135
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/133 (27%), Positives = 67/133 (50%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N L+ ++ +AR+VF+++ SWNSLI GY+ + +D L L+ M VK
Sbjct: 104 NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVK 163
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
T V AC+ L + + ++ + D+++ N+L+D + + G+ + V
Sbjct: 164 ADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKV 223
Query: 39 FDSILQRNVVSWN 1
F ++ RN+V+ N
Sbjct: 224 FFNMKVRNIVTMN 236
>gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 120 bits (300), Expect = 3e-25
Identities = 53/118 (44%), Positives = 77/118 (65%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A VF+QI +PT + WN LIRG +D+P D++ Y K + P N T+P + KAC+
Sbjct: 505 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 564
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
++A+ +GEQ+H H+ K G LSD+FV+NSLI +Y CG VFD ++ ++VVSWN
Sbjct: 565 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN 622
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/133 (33%), Positives = 73/133 (54%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++ + I AR +F+QI SW+S+I GY+ + D+L ++ +M R VK
Sbjct: 723 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 782
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
P SV +C+ L A+ G+ +H +V + +D + NSLIDMY KCG ++ V
Sbjct: 783 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQV 842
Query: 39 FDSILQRNVVSWN 1
F + +++ +SWN
Sbjct: 843 FKEMKEKDTLSWN 855
Score = 82.8 bits (203), Expect = 5e-14
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++T +++AR +F ++ SW+ +I GYT P +++ L+ +M+ +
Sbjct: 159 NVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGIS 218
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
PS T +V A S + I GE +H + K G + D+ V NSLID+Y K G ++ V
Sbjct: 219 PSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRV 278
Query: 39 FDSIL-QRNVVSW 4
FD +L +RN+VSW
Sbjct: 279 FDEMLDRRNLVSW 291
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/119 (27%), Positives = 61/119 (51%)
Frame = -2
Query: 357 HARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACS 178
H++ + +Q+ W++L++ Y+ PQD+L L+ + R + + KAC+
Sbjct: 42 HSQLIAHQVFDRRPTPWHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACA 100
Query: 177 ILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
L + Q+H VV+ GF +V+ +L+++Y CG D F+ + +N VSWN
Sbjct: 101 GLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWN 159
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/133 (27%), Positives = 67/133 (50%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N L+ ++ +AR+VF+++ SWNSLI GY+ + +D L L+ M VK
Sbjct: 591 NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVK 650
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
T V AC+ L + + ++ + D+++ N+L+D + + G+ + V
Sbjct: 651 ADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKV 710
Query: 39 FDSILQRNVVSWN 1
F ++ RN+V+ N
Sbjct: 711 FFNMKVRNIVTMN 723
>ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza
sativa Japonica Group]
Length = 566
Score = 120 bits (300), Expect = 3e-25
Identities = 53/118 (44%), Positives = 77/118 (65%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A VF+QI +PT + WN LIRG +D+P D++ Y K + P N T+P + KAC+
Sbjct: 40 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 99
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
++A+ +GEQ+H H+ K G LSD+FV+NSLI +Y CG VFD ++ ++VVSWN
Sbjct: 100 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN 157
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/133 (33%), Positives = 73/133 (54%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++ + I AR +F+QI SW+S+I GY+ + D+L ++ +M R VK
Sbjct: 258 NAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVK 317
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
P SV +C+ L A+ G+ +H +V + +D + NSLIDMY KCG ++ V
Sbjct: 318 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQV 377
Query: 39 FDSILQRNVVSWN 1
F + +++ +SWN
Sbjct: 378 FKEMKEKDTLSWN 390
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/133 (27%), Positives = 67/133 (50%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N L+ ++ +AR+VF+++ SWNSLI GY+ + +D L L+ M VK
Sbjct: 126 NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVK 185
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
T V AC+ L + + ++ + D+++ N+L+D + + G+ + V
Sbjct: 186 ADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKV 245
Query: 39 FDSILQRNVVSWN 1
F ++ RN+V+ N
Sbjct: 246 FFNMKVRNIVTMN 258
>ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 617
Score = 119 bits (299), Expect = 3e-25
Identities = 53/120 (44%), Positives = 83/120 (69%)
Frame = -2
Query: 363 IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKA 184
+D+AR +F+Q+ ++WN+LIRGY+ Q+S+FLY ++ V P N+T+P V ++
Sbjct: 1 MDYARKLFDQMPQRDVFAWNTLIRGYSNLGPCQESIFLYKELHLQGVLPDNYTFPFVLRS 60
Query: 183 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
CS+L A+K+G +IH +++K GF SD+FV +SLI +Y + G T D VFD + RN+VSW
Sbjct: 61 CSVLSALKEGREIHCNIIKHGFESDVFVQSSLISLYAQSGETLDSELVFDQMRVRNIVSW 120
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/121 (36%), Positives = 68/121 (56%)
Frame = -2
Query: 363 IDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKA 184
+D A ++F+Q+ + SWN++I Y ND ++ L+ +ML V+ T +V A
Sbjct: 203 VDVAWSLFDQMKEHSVVSWNAIIAAYEQNDV-SSTIKLFHRMLDQGVEFDYITVVTVISA 261
Query: 183 CSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSW 4
C+ L A+ G+ IH V G ++ + N+LIDMY KCG E VFD + R+VVSW
Sbjct: 262 CARLGALGTGKWIHELVKSRGLEWNVPITNALIDMYAKCGSIESARDVFDRLPIRSVVSW 321
Query: 3 N 1
+
Sbjct: 322 S 322
Score = 77.0 bits (188), Expect = 3e-12
Identities = 39/115 (33%), Positives = 63/115 (54%)
Frame = -2
Query: 345 VFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSILDA 166
VF+Q+ SW ++I GY N + L ++ KM+ + P+ T SV AC+ LD
Sbjct: 108 VFDQMRVRNIVSWTAMIAGYVQNGIHEKGLGVFLKMVDSGTLPNAITLVSVLPACARLDC 167
Query: 165 IKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
+ G IH + +K G +D+ + N+L+ Y KCG + +FD + + +VVSWN
Sbjct: 168 LDLGMLIHGYSIKLGVETDVSLVNALVAFYGKCGLVDVAWSLFDQMKEHSVVSWN 222
>ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Oryza brachyantha]
Length = 1035
Score = 119 bits (298), Expect = 4e-25
Identities = 53/118 (44%), Positives = 76/118 (64%)
Frame = -2
Query: 354 ARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACSI 175
A VF+QI PT + WN +IRG +++P D++ Y K R + P N T+P + KAC+
Sbjct: 509 AHKVFDQIEGPTTFYWNIIIRGLAQSNAPADAIAFYKKAQRGGMVPDNLTFPFILKACAG 568
Query: 174 LDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
+ A+K+GEQIH H++K G L D+FV+NSLI +Y CG VFD + ++VVSWN
Sbjct: 569 ISALKEGEQIHDHIMKLGLLQDIFVSNSLIHLYAACGNICYARSVFDEMSVKDVVSWN 626
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/133 (34%), Positives = 75/133 (56%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++T R + AR +F+QI SW+S+I GY+ D D+L ++ +M R VK
Sbjct: 727 NAMITAYAKGRDLLSARKIFDQIPKKDLISWSSMISGYSQADHFSDALEIFRQMQRAKVK 786
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
P SV +C+ L A+ G+ +H +V + +D+ + NSLI MY KCG T++ V
Sbjct: 787 PDAIVIASVLSSCAHLGALDLGKWVHDYVRRNIIKADIVMENSLIYMYMKCGSTKEAFQV 846
Query: 39 FDSILQRNVVSWN 1
F + +++ +SWN
Sbjct: 847 FKEMKEKDTLSWN 859
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N ++T +++AR +F Q+ SW+ +I GYT +++ L+ M+ +
Sbjct: 163 NVVITGFAAWGEVEYARLLFEQMPCRNVISWSGMIDGYTRACCFVEAVALFRHMMAEGIH 222
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
PS T +V A S + I GE +H + K G + D+ V NSLID+Y K G ++ V
Sbjct: 223 PSEITVLAVVPALSNIGKILMGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRV 282
Query: 39 FDSIL-QRNVVSW 4
FD +L +RN+VSW
Sbjct: 283 FDEMLDRRNLVSW 295
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/133 (29%), Positives = 68/133 (51%)
Frame = -2
Query: 399 NHLLTKLVDLRSIDHARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVK 220
N L+ +I +AR+VF++++ SWNSLI GY+ + +D L L+ M VK
Sbjct: 595 NSLIHLYAACGNICYARSVFDEMSVKDVVSWNSLICGYSQCNRFKDVLALFELMHNEGVK 654
Query: 219 PSNFTYPSVFKACSILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHV 40
T V AC+ L + + + ++ + D+++ N+LID Y + G+ + V
Sbjct: 655 ADKVTMVKVVSACTRLGKYSRADCMVRYIEDYCIEVDIYLGNTLIDYYGRRGQLQSAEKV 714
Query: 39 FDSILQRNVVSWN 1
F + RN+V+ N
Sbjct: 715 FFDMKDRNIVTMN 727
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/119 (25%), Positives = 62/119 (52%)
Frame = -2
Query: 357 HARAVFNQIASPTDYSWNSLIRGYTLNDSPQDSLFLYSKMLRTAVKPSNFTYPSVFKACS 178
H++ + +Q+ W++L++ Y+ Q++L L+ + + + + KAC+
Sbjct: 46 HSQLIAHQVFDRRPTPWHALLKAYSHGPFLQEALQLF-RYAQWHAADDTYAFTFALKACA 104
Query: 177 ILDAIKQGEQIHTHVVKFGFLSDLFVNNSLIDMYCKCGRTEDGHHVFDSILQRNVVSWN 1
L + G Q+H V++ GF +V+ +++++Y CG D VF+ + +N VSWN
Sbjct: 105 GLGWPRAGAQLHGLVIRKGFEFHTYVHTAVVNVYVVCGCLVDAQIVFEEMPVKNAVSWN 163