BLASTX nr result

ID: Akebia24_contig00013142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00013142
         (362 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/52 (63%), Positives = 44/52 (84%)
 Frame = +2

Query: 200 ALSSNLDYSLSLFSQISSHETHICNRVLREISRSIAPEKTLLLYQKMRIEGI 355
           ALSS+LDY+LS+F+ I   ETH+CNR LRE+SRS  PEKTLL+Y++MR +G+
Sbjct: 67  ALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGL 118


>ref|XP_004298066.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Fragaria vesca subsp. vesca]
          Length = 736

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = +2

Query: 197 FALSSNLDYSLSLFSQISSHETHICNRVLREISRSIAPEKTLLLYQKMRIEGI 355
           F LS +L Y LSLF QI   +TH+CN++LRE+SR   PEK LL+Y+ MR EG+
Sbjct: 75  FPLSPSLHYPLSLFHQIPKPQTHLCNKLLRELSRCREPEKALLVYETMRREGV 127


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