BLASTX nr result
ID: Akebia24_contig00012280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00012280
(304 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 64 2e-08
emb|CBI25341.3| unnamed protein product [Vitis vinifera] 64 2e-08
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] 64 2e-08
ref|XP_007011378.1| Zinc ion binding,DNA binding,helicases,ATP b... 63 4e-08
ref|XP_007011377.1| Zinc ion binding,DNA binding,helicases,ATP b... 63 4e-08
ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citr... 61 1e-07
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat... 61 2e-07
ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Popu... 60 2e-07
ref|XP_006371299.1| hypothetical protein POPTR_0019s08840g, part... 60 2e-07
ref|XP_006387228.1| hypothetical protein POPTR_1470s002001g, par... 60 3e-07
ref|XP_006371298.1| hypothetical protein POPTR_0019s08820g, part... 59 5e-07
ref|XP_006371295.1| hypothetical protein POPTR_0019s08790g, part... 59 5e-07
gb|EXB93421.1| E3 ubiquitin-protein ligase SHPRH [Morus notabilis] 59 9e-07
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = +2
Query: 5 H*KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQ------GHIDVEGSCGT 166
H K +DKW+MCPT RQHT VGNIAYADDRQ K+ +S T Q + V+GS GT
Sbjct: 1408 HGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCDSAELHTVQSVEKSEASVIVQGSYGT 1467
>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
Length = 1717
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = +2
Query: 5 H*KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQ------GHIDVEGSCGT 166
H K +DKW+MCPT RQHT VGNIAYADDRQ K+ +S T Q + V+GS GT
Sbjct: 1433 HGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCDSAELHTVQSVEKSEASVIVQGSYGT 1492
>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
Length = 2416
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Frame = +2
Query: 5 H*KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQ------GHIDVEGSCGT 166
H K +DKW+MCPT RQHT VGNIAYADDRQ K+ +S T Q + V+GS GT
Sbjct: 2132 HGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCDSAELHTVQSXEKSEASVIVQGSYGT 2191
>ref|XP_007011378.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 2 [Theobroma cacao]
gi|508728291|gb|EOY20188.1| Zinc ion binding,DNA
binding,helicases,ATP binding,nucleic acid binding
isoform 2 [Theobroma cacao]
Length = 1666
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Frame = +2
Query: 11 KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT 166
KS++KWVMCP RQHT VGNIA ADDRQ K+ NS + T QG + V+GS GT
Sbjct: 1388 KSQNKWVMCPICRQHTDVGNIALADDRQIKSPNSAILHTIQGGNNGEESLTVQGSYGT 1445
>ref|XP_007011377.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 1 [Theobroma cacao]
gi|508728290|gb|EOY20187.1| Zinc ion binding,DNA
binding,helicases,ATP binding,nucleic acid binding
isoform 1 [Theobroma cacao]
Length = 1682
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Frame = +2
Query: 11 KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT 166
KS++KWVMCP RQHT VGNIA ADDRQ K+ NS + T QG + V+GS GT
Sbjct: 1404 KSQNKWVMCPICRQHTDVGNIALADDRQIKSPNSAILHTIQGGNNGEESLTVQGSYGT 1461
>ref|XP_006435948.1| hypothetical protein CICLE_v10030489mg [Citrus clementina]
gi|568865566|ref|XP_006486145.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X1 [Citrus
sinensis] gi|568865568|ref|XP_006486146.1| PREDICTED: E3
ubiquitin-protein ligase SHPRH-like isoform X2 [Citrus
sinensis] gi|557538144|gb|ESR49188.1| hypothetical
protein CICLE_v10030489mg [Citrus clementina]
Length = 1685
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Frame = +2
Query: 11 KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT 166
K +++WVMCPT RQ T +GNIAYADDRQ+K+ NS MP Q V+GS GT
Sbjct: 1400 KVKNEWVMCPTCRQRTDIGNIAYADDRQDKSCNSDMPHGVQDCEKGEESFTVQGSYGT 1457
>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
helicase, putative [Ricinus communis]
Length = 1588
Score = 60.8 bits (146), Expect = 2e-07
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Frame = +2
Query: 11 KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQGH------IDVEGSCGT 166
K + KWVMCPT RQHT NIAYADDR +K+ NS + +T QG+ + V+GS GT
Sbjct: 1325 KFQRKWVMCPTCRQHTDFRNIAYADDRNDKSCNSAVLNTVQGYEKCEASLIVQGSYGT 1382
>ref|XP_006371305.1| hypothetical protein POPTR_0019s08910g [Populus trichocarpa]
gi|550317057|gb|ERP49102.1| hypothetical protein
POPTR_0019s08910g [Populus trichocarpa]
Length = 1680
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Frame = +2
Query: 23 KWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT 166
KWVMCPT RQHT GNIAYADDR++K+ +S M QG + V+GS GT
Sbjct: 1403 KWVMCPTCRQHTDFGNIAYADDRRDKSCSSAMLDAIQGCEKTEASLAVQGSYGT 1456
>ref|XP_006371299.1| hypothetical protein POPTR_0019s08840g, partial [Populus
trichocarpa] gi|550317050|gb|ERP49096.1| hypothetical
protein POPTR_0019s08840g, partial [Populus trichocarpa]
Length = 268
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Frame = +2
Query: 23 KWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGTILVGSF 184
KWVMCPT RQHT GNIAYADD+++K+ +S M QG + V+GS GT S+
Sbjct: 17 KWVMCPTCRQHTDFGNIAYADDKRDKSCSSAMLDAIQGCEKTEASLAVQGSYGT---KSW 73
Query: 185 NINQMKLK 208
N++ + L+
Sbjct: 74 NMHMVHLR 81
>ref|XP_006387228.1| hypothetical protein POPTR_1470s002001g, partial [Populus
trichocarpa] gi|550305894|gb|ERP46142.1| hypothetical
protein POPTR_1470s002001g, partial [Populus
trichocarpa]
Length = 147
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Frame = +2
Query: 23 KWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT--ILVG 178
KWVMCPT RQHT GNIAYADD+++K+ +S M QG + V+GS GT I +
Sbjct: 30 KWVMCPTCRQHTDFGNIAYADDKRDKSCSSAMLDAIQGCEKTEASLAVQGSYGTKSINLV 89
Query: 179 SFNINQMKLKS*KELYYRIIKETLYLDAVTSAARCLTFFS 298
F +K+++ I + L++ + A+ L F S
Sbjct: 90 HFFFGTIKVEA-------ITRRILWIKSSDPKAKVLVFSS 122
>ref|XP_006371298.1| hypothetical protein POPTR_0019s08820g, partial [Populus
trichocarpa] gi|550317048|gb|ERP49095.1| hypothetical
protein POPTR_0019s08820g, partial [Populus trichocarpa]
Length = 230
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Frame = +2
Query: 23 KWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT 166
KWVMCPT RQHT GNIAYADD+++K+ +S M QG + V+GS GT
Sbjct: 46 KWVMCPTCRQHTDFGNIAYADDKRDKSCSSAMLDAIQGCEKTEASLAVQGSYGT 99
>ref|XP_006371295.1| hypothetical protein POPTR_0019s08790g, partial [Populus
trichocarpa] gi|550317045|gb|ERP49092.1| hypothetical
protein POPTR_0019s08790g, partial [Populus trichocarpa]
Length = 364
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Frame = +2
Query: 23 KWVMCPTSRQHTGVGNIAYADDRQNKAYNSVMPSTFQG------HIDVEGSCGT 166
KWVMCPT RQHT GNIAYADD+++K+ +S M QG + V+GS GT
Sbjct: 96 KWVMCPTCRQHTDFGNIAYADDKRDKSCSSAMLDAIQGCEKTEASLAVQGSYGT 149
>gb|EXB93421.1| E3 ubiquitin-protein ligase SHPRH [Morus notabilis]
Length = 1688
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Frame = +2
Query: 11 KSRDKWVMCPTSRQHTGVGNIAYADDRQNKAYNSVM------PSTFQGHIDVEGSCGT 166
K ++KWV CPT RQHT VGNIAY DDRQN+ +S + P I V+GS GT
Sbjct: 1405 KIQNKWVKCPTCRQHTDVGNIAYVDDRQNENCDSSLLHTTDGPENLGSSIVVQGSYGT 1462