BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00012200
         (1730 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   732   0.0  
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun...   720   0.0  
ref|XP_002304926.2| pseudouridine synthase family protein [Popul...   705   0.0  
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob...   701   0.0  
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   686   0.0  
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr...   682   0.0  
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl...   677   0.0  
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl...   673   0.0  
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor...   671   0.0  
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl...   670   0.0  
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl...   662   0.0  
ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phas...   655   0.0  
gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus...   653   0.0  
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor...   653   0.0  
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   650   0.0  
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   648   0.0  
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   638   e-180
ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [A...   636   e-180
ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chlor...   634   e-179
ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   633   e-179

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  732 bits (1890), Expect = 0.0
 Identities = 350/463 (75%), Positives = 392/463 (84%)
 Frame = -2

Query: 1660 LVSSLRTSNCRSFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTFSCRTLKADVGAT 1481
            LVSSL  SNCRSF  P+AL RTLA++ V     + + +CS    N     R L A   + 
Sbjct: 14   LVSSLWNSNCRSFGTPVALARTLASSNVFSRRHKRVVWCS----NNPTCTRELTASSDSA 69

Query: 1480 ISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFG 1301
             + SS +GY EY RLLPCP QNGPPR+EHLVVS GG VL+YIS AL+LPPLFVADLIHFG
Sbjct: 70   -NTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFG 128

Query: 1300 AVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVE 1121
            AVYYALVCP+PPP+ATPEQ+R+FKEVTAPSVLRKR SIKGKT+REAQKTFRIT VNEFVE
Sbjct: 129  AVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVE 188

Query: 1120 VGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFAT 941
             GTYLRVHVHPKR PRCYEIDWKSRIIAV +SYVVLDKPAGTSVGGTTDNIEESCATFAT
Sbjct: 189  AGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFAT 248

Query: 940  RALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGI 761
            RALGL TPL+TTHQIDNCTEGCVVLARTK+YCS+FHGKIR             AP+PIGI
Sbjct: 249  RALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGI 308

Query: 760  ITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSKDVA 581
            +THYMRPVN+APRL+S+DF+KGW+LCQLEVLECKEVPWP+  IEEKYCI+D GWP K+ A
Sbjct: 309  VTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSA 368

Query: 580  YECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYESEDD 401
            ++CKINLLTGRTHQ+RAQLAACGAPIVGDSMY+PA IAE+  PGLNPF +Y+K+Y +E+D
Sbjct: 369  FKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTEND 428

Query: 400  RTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWW 272
            R  AV EWIAQHGKEP VAIGLQACQISWDDGEHFY+AG PWW
Sbjct: 429  RETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
            gi|462409392|gb|EMJ14726.1| hypothetical protein
            PRUPE_ppa020640mg [Prunus persica]
          Length = 477

 Score =  720 bits (1858), Expect = 0.0
 Identities = 345/469 (73%), Positives = 390/469 (83%), Gaps = 7/469 (1%)
 Frame = -2

Query: 1654 SSLRTSNCRSFAVPMALVRTLATTYV-LKNHDRN-----LAFCSWGSTNRT-FSCRTLKA 1496
            +S+  + CRSF+ P+ALVRTLA T+V L  H  N     +A  S  S  RT F+C +LK 
Sbjct: 7    TSMLANGCRSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACESLKQ 66

Query: 1495 DVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVAD 1316
             V    S SS +GY EY+RLLPCP  NGPPR+EHLVVS GGPVLEYI   L+LPP FVAD
Sbjct: 67   GVTQPTSVSSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVAD 126

Query: 1315 LIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHV 1136
            LIHFGAVYYALVCP PPPTATPEQ+RVFKEVTAPSVL+ R SIKGKTVREAQKTFRITH 
Sbjct: 127  LIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHA 186

Query: 1135 NEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESC 956
            +EFVE GTYLRVHVHPKR PRCY+IDWKSRIIAV++ +VVLDKPAGT+VGGTTDNIEESC
Sbjct: 187  DEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESC 246

Query: 955  ATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAP 776
            ATFATRALGL TPL TTHQIDNCTEGCVVLARTK+YCS+FHGKIR             AP
Sbjct: 247  ATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAP 306

Query: 775  VPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWP 596
            VP GIITHYMRP+N+APRL+S+DF++ W LCQLEV+ECKE+PWPNA +EEKYC++D GWP
Sbjct: 307  VPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVEDCGWP 366

Query: 595  SKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQY 416
            SKD AYECKINLLTGRTHQVRAQLAACGAPIVGDSMY+PA +AEM  PGLNPF +Y+K Y
Sbjct: 367  SKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQYKKHY 426

Query: 415  ESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
             +E+D+  AV EWIA+HGKEP+VAIGLQACQISWDDG+H +EA  PWWR
Sbjct: 427  TTENDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475


>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
            gi|550340110|gb|EEE85437.2| pseudouridine synthase family
            protein [Populus trichocarpa]
          Length = 470

 Score =  705 bits (1819), Expect = 0.0
 Identities = 331/463 (71%), Positives = 384/463 (82%)
 Frame = -2

Query: 1657 VSSLRTSNCRSFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTFSCRTLKADVGATI 1478
            ++S+ + + RSF+ P+ L+RTLA T     + + L +CS   + R  SC +LK D+  T 
Sbjct: 6    LASIFSYSYRSFSAPVTLLRTLAFTRAYSLNKKALVWCSL--SKRKLSCESLKQDIACTT 63

Query: 1477 SNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFGA 1298
            + SS +GY EY+RLLPCP  N PPRIEHLVVS  GPVL+YI  AL+LPPLFVADLIHFGA
Sbjct: 64   ATSSVNGYPEYTRLLPCPSHNSPPRIEHLVVSEEGPVLDYICKALDLPPLFVADLIHFGA 123

Query: 1297 VYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVEV 1118
            V+YALVCP PP TATPEQIRVF+EVTAPSVL+KR SIKGKTVREAQKTFRITHV++F+E 
Sbjct: 124  VHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEA 183

Query: 1117 GTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFATR 938
            G YLRVHVHPKR PRCY+IDWKSRII V +S+VVLDKPAGTSVGGTTDNIEESCATFATR
Sbjct: 184  GMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATR 243

Query: 937  ALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGII 758
            ALGL  PL+TTHQIDNCTEGCVVLART++ CS+FHGKIR             +PVPIG++
Sbjct: 244  ALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVV 303

Query: 757  THYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSKDVAY 578
             HYMRP+NMAPRLVS++F+KGWHLCQLEV+ECK VPWP+A +EEKYC+ D GWPSKD AY
Sbjct: 304  NHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAY 363

Query: 577  ECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYESEDDR 398
            ECKINLLTGRTHQ+RAQLAA GAP+VGDSMY+PA +AEM  PG NPF +Y+KQY SEDD+
Sbjct: 364  ECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDK 423

Query: 397  TKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
              AVEEW+  HGKEP+VAIGLQACQISWDDG+H Y AG PWWR
Sbjct: 424  AIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466


>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 491

 Score =  701 bits (1809), Expect = 0.0
 Identities = 344/477 (72%), Positives = 387/477 (81%), Gaps = 20/477 (4%)
 Frame = -2

Query: 1630 RSFAVPMALVRTLATT----YVL-KNHDRN-LAFCSWGSTNRTFSCRTLKADVGATISNS 1469
            RS   PM+L+RTLA+T    Y L KN+ +  L++   GS+ R  SC + K D   T S +
Sbjct: 15   RSLGAPMSLLRTLASTGASLYKLNKNYSKTVLSWSCLGSSRRELSCLSTKMDAAQTASAT 74

Query: 1468 SFDG--------------YSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPP 1331
            S +G              Y EY RLLPCP  NGPPR+EHLVVS GGPVLEYI  AL+LPP
Sbjct: 75   SVNGVLLYFMIEIHFLFSYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPP 134

Query: 1330 LFVADLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTF 1151
            +FVADLIHFGAVYYALVCP PPP+ATPEQIR+FKEVTAPSVL KR SI+GKTVREAQKTF
Sbjct: 135  MFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTF 194

Query: 1150 RITHVNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDN 971
            RITHV++FVE GTYLRVHVHPKR PRCYEIDWKSRIIAV DSYVVLDKPAGTSVGGTTDN
Sbjct: 195  RITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDN 254

Query: 970  IEESCATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXX 791
            IEESCATFA RALG  TPLKTTHQIDNCTEGCVVLARTK+YCS+FHGKIR          
Sbjct: 255  IEESCATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLA 314

Query: 790  XXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCID 611
               AP+PIG+ITHYMRP+NMAPRLVS+DF+KGW+LCQLEV+ECK+VPWP+  I+E YCI+
Sbjct: 315  LTAAPLPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIE 374

Query: 610  DHGWPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSE 431
            D GWP KD AYECKINLLTGRTHQVRAQLAACGAPI+GDSMY+P  IAE+A PGLNPF +
Sbjct: 375  DSGWPLKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGK 434

Query: 430  YRKQYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR*HK 260
            Y+K + SE+D+  A+ EWI+Q GKEPSVAIGLQACQISWDDGEHFY+A  PWWR  K
Sbjct: 435  YKK-HTSENDKEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWRSRK 490


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  686 bits (1770), Expect = 0.0
 Identities = 326/467 (69%), Positives = 384/467 (82%), Gaps = 4/467 (0%)
 Frame = -2

Query: 1657 VSSLRTSNCRSFAVPMALVRTLATTYVL---KNHDRN-LAFCSWGSTNRTFSCRTLKADV 1490
            ++S+     RSF  P+ ++RTLA+T+     ++H +N LA  S  S  R F C + K +V
Sbjct: 6    LASIFAGGYRSFVTPVTVLRTLASTHAYSFHRHHPKNALARFSLNSHERKFCCESSKPEV 65

Query: 1489 GATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLI 1310
              T + S  +G S+Y RLLPCP  N PPRIEHLVV   GPVL+YI  AL+LPPLFVADLI
Sbjct: 66   AYTTNTSCVNGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLI 125

Query: 1309 HFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNE 1130
             FGAV+YALVCP PP TATPEQIR+F++ TAPSVL+KR SIKGKTVREAQKTFRITHV++
Sbjct: 126  DFGAVHYALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQ 185

Query: 1129 FVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCAT 950
            ++E GTYLRVHVHPKR PRCY+IDWKSRIIAV D YVVLDKPAGTSVGGT DNIEESCAT
Sbjct: 186  YLEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCAT 245

Query: 949  FATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVP 770
            FATRALGL TPLKTTHQIDNCTEGCVVLAR+K+YCS+FHGKIR             +PVP
Sbjct: 246  FATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVP 305

Query: 769  IGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSK 590
            +G+I +YMRPVN+APRL+S++F+ GWHLCQLEVLEC++VPWP+AAIEEKY ++D GWPSK
Sbjct: 306  VGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSK 365

Query: 589  DVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYES 410
            D AYECKINLLTGRTHQ+RAQLAA GAP+VGDSMY+PA +AEMA PGLNPF ++RKQY +
Sbjct: 366  DFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTN 425

Query: 409  EDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            E D + AV EW+AQHGKEP VAIGLQAC+ISWD+G+H Y+AG PWWR
Sbjct: 426  ESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
            gi|557551677|gb|ESR62306.1| hypothetical protein
            CICLE_v10015055mg [Citrus clementina]
          Length = 487

 Score =  682 bits (1761), Expect = 0.0
 Identities = 333/473 (70%), Positives = 385/473 (81%), Gaps = 11/473 (2%)
 Frame = -2

Query: 1654 SSLRTSNCRSFAVPMALVRTLATTYVL--KNHDRNLAFCSWGSTNRTFSCRTLKADV--- 1490
            SS+ T+N RS   P++L+RTLA+T+    +N  ++    S+ S+NR F C + K  V   
Sbjct: 7    SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTH 66

Query: 1489 ------GATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPL 1328
                   A  + SS+ GY EY RLLPCP QN PPR+EHLVVS GGPVLEYI   LNLPPL
Sbjct: 67   TDTTATAAAATPSSY-GYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPL 125

Query: 1327 FVADLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFR 1148
            FVADLIHFGAVYYALVCP PP TATPEQ+RVFKEVT PSVL KR SIKGKTVREAQKTFR
Sbjct: 126  FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 185

Query: 1147 ITHVNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNI 968
            ITHV++ VE GTYLRVHVHPKR PRCY+IDWKSRIIAV +S+VVLDKPAGTSVGGTTDNI
Sbjct: 186  ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNI 245

Query: 967  EESCATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXX 788
            EESCATFA+RALGL TPL+TTHQIDNCTEGCVVLART++YCSIFH KIR           
Sbjct: 246  EESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLAL 305

Query: 787  XXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDD 608
              AP+P+GI+THYMRP+N+APRL+S+DF+KGW+LCQLEV+ECK+VPWP+A + + Y I+D
Sbjct: 306  TAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIED 365

Query: 607  HGWPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEY 428
             GWPS+D AYECKI LLTGRTHQVRAQLAACGAPIVGDSMY+PA IA+++ PGLNPF + 
Sbjct: 366  CGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKC 425

Query: 427  RKQYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            +K+Y S+DD+  AV EWI+QHGKEPSVAIGLQAC ISWDDGE  YEA  PWWR
Sbjct: 426  QKEYASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 487

 Score =  677 bits (1748), Expect = 0.0
 Identities = 331/473 (69%), Positives = 383/473 (80%), Gaps = 11/473 (2%)
 Frame = -2

Query: 1654 SSLRTSNCRSFAVPMALVRTLATTYVL--KNHDRNLAFCSWGSTNRTFSCRTLK------ 1499
            SS+ T+N RS   P++L+RTLA+T+    +N  ++    S+ S+NR F C + K      
Sbjct: 7    SSIFTNNGRSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTH 66

Query: 1498 ---ADVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPL 1328
               A + A  + SS+ GY EY RLLPCP QN PPR+EHLVVS GGPVLEYI   LNLPPL
Sbjct: 67   TDTAAIAAATTPSSY-GYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPL 125

Query: 1327 FVADLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFR 1148
            FVADLIHFGAVYYALVCP PP TATPEQ+RVFKEVT PSVL KR SIKGKTVREAQKTFR
Sbjct: 126  FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 185

Query: 1147 ITHVNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNI 968
            ITHV++ VE GTYLRVHVHPKR PRCY+IDW SRIIAV +S+VVLDKPAGTSVGGTTDNI
Sbjct: 186  ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245

Query: 967  EESCATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXX 788
            EESCATFA+RALGL TPL+TTHQIDNCTEGCVVLART++YCSIFH KIR           
Sbjct: 246  EESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLAL 305

Query: 787  XXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDD 608
              AP+P+GI+THYMRP+N+APRLVS+DF+ GW+LCQLEV+ECK+VPWP+A + + Y I+D
Sbjct: 306  TTAPLPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIED 365

Query: 607  HGWPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEY 428
             GWPS+D AYECKI LLTGRTHQVRAQLAACGAPIVGDSMY+PA IA+++ PGLNPF + 
Sbjct: 366  CGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKC 425

Query: 427  RKQYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            +K+Y S+DD+  AV EWI+QHG EPSVAIGLQAC ISWDDGE  YEA  PWWR
Sbjct: 426  QKEYASDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478


>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  673 bits (1737), Expect = 0.0
 Identities = 324/470 (68%), Positives = 370/470 (78%), Gaps = 6/470 (1%)
 Frame = -2

Query: 1660 LVSSLRTSNCRSFAVPMAL--VRTLATTYVLKNHDRNLAFCSWGSTNRTFS----CRTLK 1499
            + S L + +CRS A+P A   VR      V   +    ++C   S N   +       L 
Sbjct: 8    VASMLFSGSCRSLAMPAAARAVRISRAALVNNRNKHPPSWCCRSSHNSNTALAGEAEFLT 67

Query: 1498 ADVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVA 1319
             D G   + SS D + +Y RLLPCP    PPRIEHLVVS GGPVLE+I  AL+LPPL+V+
Sbjct: 68   TDAGILNATSSSDSFRKYDRLLPCPSHKTPPRIEHLVVSEGGPVLEHICKALDLPPLYVS 127

Query: 1318 DLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITH 1139
            DLI FGAVYYALVCP PPP AT EQIRVFKEVT PSVLRKR SIKGKTVREAQKTFR+TH
Sbjct: 128  DLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTH 187

Query: 1138 VNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEES 959
            V++FVE GTYLRVHVHPKRSPRCYEIDW+SRII VA+SYVVLDKPAGTSVGGTTDNIEES
Sbjct: 188  VDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEES 247

Query: 958  CATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXA 779
            CATFATRALG+ TPL TTHQIDNCTEGCVVLARTK+YCS+FHGKIR              
Sbjct: 248  CATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAF 307

Query: 778  PVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGW 599
            P+P GIITHYMRP++MAPRL+S+DF+KGWHLCQLEVLEC++VPWP  AI++KYCI+D GW
Sbjct: 308  PLPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGW 367

Query: 598  PSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQ 419
            PS+D AYECKINLLTG+THQ+RAQ AA  AP++GDSMY+PA IA M+ PGLNPF +Y+K 
Sbjct: 368  PSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKD 427

Query: 418  YESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            + SE ++  AV  WIAQHGKEPSVAIGLQACQISWDD EHFYEA  PWWR
Sbjct: 428  FSSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 477


>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 477

 Score =  671 bits (1732), Expect = 0.0
 Identities = 326/471 (69%), Positives = 378/471 (80%), Gaps = 8/471 (1%)
 Frame = -2

Query: 1657 VSSLRTSNCRSFAVPMALVRTLATTYV-LKNHDRNLAFC--SWGST-----NRTFSCRTL 1502
            ++SL  S CRSF  P+ LVRTLA T+V L    R+      +W S      N+  +C +L
Sbjct: 6    LASLLGSGCRSFIAPVGLVRTLALTHVGLSEQLRSYQHVKVAWFSKKLKKKNKRVACESL 65

Query: 1501 KADVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFV 1322
            K +V    + SS  GY  Y+RLLPCP QNGPPR+EHLVVS GGPVLEYI   L+LP  FV
Sbjct: 66   KEEVTYPTAASSVYGYP-YTRLLPCPSQNGPPRVEHLVVSEGGPVLEYICKKLDLPAQFV 124

Query: 1321 ADLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRIT 1142
            ADLIHFGAVYYALVCP PPPTATPEQ+RV+KEVTAPSVL+KR SIKGKTVREAQKTFRIT
Sbjct: 125  ADLIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRIT 184

Query: 1141 HVNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEE 962
            H +++VE GTYLRVHVHPKR PRCY+IDWKSR+IAV + +VVLDKPAGT+VGGTTDNIEE
Sbjct: 185  HADQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEE 244

Query: 961  SCATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXX 782
            SCATF +RALGL TPL TTHQIDNCTEGCVVLARTKDYCS+FHGKIR             
Sbjct: 245  SCATFTSRALGLSTPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAA 304

Query: 781  APVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHG 602
            APVP+G ITHYMRP+N+APRL+S+D ++ W LCQLEV+ECK+VPWP++ IEE+Y ++D G
Sbjct: 305  APVPLGTITHYMRPINVAPRLISEDSIERWSLCQLEVMECKKVPWPSSVIEEEYGVEDCG 364

Query: 601  WPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRK 422
            WPSKD AYECKINLLTG+THQ+RAQLAACG P+VGDSMY+PA IAEM  P LNPF +++K
Sbjct: 365  WPSKDYAYECKINLLTGKTHQIRAQLAACGTPLVGDSMYMPAAIAEMENPELNPFGKHKK 424

Query: 421  QYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
             Y  E+D   AV EW+A+HGKEP VAIGLQACQISWDDGEH +EA  PWWR
Sbjct: 425  HYAGENDEEIAVTEWMARHGKEPIVAIGLQACQISWDDGEHSFEARAPWWR 475


>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Glycine max]
          Length = 478

 Score =  670 bits (1729), Expect = 0.0
 Identities = 323/471 (68%), Positives = 367/471 (77%), Gaps = 7/471 (1%)
 Frame = -2

Query: 1660 LVSSLRTSNCRSFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTFSCRTLKA----- 1496
            + S L    CR  AVP A          L +H    A  SWG  +   S   L       
Sbjct: 8    VASMLFAGGCRILAVPAAARAIRIPRAALSSHHNKHA-PSWGCRSSHNSNTALAGEAEFS 66

Query: 1495 --DVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFV 1322
              D G   + SS D + +Y RLLPCP    PPRIEHLV+S GGPVLE I  AL+LPPL+V
Sbjct: 67   TTDAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYV 126

Query: 1321 ADLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRIT 1142
            +DLI FGAVYYALVCP PPP AT EQIRVFKEVT PSVLRKR SIKGKTVREAQKTFR+T
Sbjct: 127  SDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVT 186

Query: 1141 HVNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEE 962
            HV++FVE GTYLRVHVHPKR PR YEIDW+SRIIAVA+SYVVLDKPAGTSVGGTTDNIEE
Sbjct: 187  HVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEE 246

Query: 961  SCATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXX 782
            SCATFATRALG+ TPL TTHQIDNCTEGCVVLARTKDYCSIFHGKIR             
Sbjct: 247  SCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAA 306

Query: 781  APVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHG 602
            +P+P GIITHYMRP+NMAPRL+S+DF+KGWHLCQLEVLEC+++PWP  AI++KYC++D G
Sbjct: 307  SPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCG 366

Query: 601  WPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRK 422
            WPS+D AYECKINLLTG+THQ+RAQ AA  AP++GDSMY+PA IA+++ PGLNPF +Y+K
Sbjct: 367  WPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKK 426

Query: 421  QYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
             + SE ++  AV  W+AQHGKEPSVAIGLQACQISWDD EHFYEAG PWWR
Sbjct: 427  DFSSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 477


>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
            X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
            PREDICTED: RNA pseudouridine synthase 6,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 483

 Score =  662 bits (1708), Expect = 0.0
 Identities = 320/470 (68%), Positives = 375/470 (79%), Gaps = 6/470 (1%)
 Frame = -2

Query: 1660 LVSSLRTSNCRS-FAVPMALVRTLATTYVL----KNHDRNLAFCSWGSTNRTFSCR-TLK 1499
            + S L T N R+ F  P  +V T A+T       KNH + LA     S +R+FSC+ T  
Sbjct: 17   IASRLWTPNWRNGFFSPFNMVHTFASTRSRLLKNKNHYKRLAL---SSCSRSFSCQSTAL 73

Query: 1498 ADVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVA 1319
            +D+ +T    S +G+  Y RL+PCPLQN PPR+EHLVV+  GPVLEYI  AL+LPPL+V 
Sbjct: 74   SDISSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEYICKALDLPPLYVE 133

Query: 1318 DLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITH 1139
            DLI FGAVYYALVCP PPPTA+PEQI+V++EVT PS+LR+R SIKGKTVREAQKTF+IT 
Sbjct: 134  DLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITR 193

Query: 1138 VNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEES 959
             +E VE GTYLRVHVHPKR PRCY+IDWKSRIIAV D YVVLDKPAGTSVGGTTDNIEES
Sbjct: 194  ADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEES 253

Query: 958  CATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXA 779
            CATFATRALG   PL TTHQIDNCTEGCVVLAR+K+YCS+FHGKIR             A
Sbjct: 254  CATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAA 313

Query: 778  PVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGW 599
            PVPIGI+THYMRP+NMAPRLVS+DF+KGW LCQLEVLECK+VPWP++ I+  Y ++D GW
Sbjct: 314  PVPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSSEIQRTYNLEDCGW 373

Query: 598  PSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQ 419
              KD AYEC+INLLTGRTHQ+RAQLAAC AP+VGDSMY+PA IAE+ CPG NPF + +K 
Sbjct: 374  ALKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIVCPGSNPFGKNKKL 433

Query: 418  YESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            Y +E+D++ A++EWIAQHGKEPSVA+GLQACQISWDDG+H Y A  PWWR
Sbjct: 434  YSNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLPWWR 483


>ref|XP_007147743.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
            gi|561020966|gb|ESW19737.1| hypothetical protein
            PHAVU_006G151200g [Phaseolus vulgaris]
          Length = 478

 Score =  655 bits (1689), Expect = 0.0
 Identities = 312/470 (66%), Positives = 363/470 (77%), Gaps = 6/470 (1%)
 Frame = -2

Query: 1660 LVSSLRTSNCRSFAVPMALVRTLATTYVLKNHDRNLA--FCSWGSTNRTFSCRT----LK 1499
            + S L +  CRS A P        +   L+NH    A  +C   S N   +        K
Sbjct: 8    VASMLFSGVCRSLATPAVARSFRMSRAALRNHQNKNAPSWCCRSSYNSYTAIAAESEFSK 67

Query: 1498 ADVGATISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVA 1319
             D     + SS +   +Y RLLPCPL   PPR+EHLVVS GGPVLE+I  AL LPPL+V 
Sbjct: 68   TDAENLTATSSSNSLPKYDRLLPCPLHKTPPRVEHLVVSEGGPVLEHICKALELPPLYVT 127

Query: 1318 DLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITH 1139
            DLI FGAVYYALVCP PPP+AT EQIRVFKEVT PSVLR+R SIKGKTVREAQKTFR+TH
Sbjct: 128  DLIQFGAVYYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTH 187

Query: 1138 VNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEES 959
             ++FVE GTYLRVHVHPKR PRCYEIDW+SRII+VA+SYVVLDKPAGTSVGGTTDNIEES
Sbjct: 188  ADQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEES 247

Query: 958  CATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXA 779
            CATFATRALGL  PL TTHQIDNCTEGCVVLARTK+YCS+FHGKIR             +
Sbjct: 248  CATFATRALGLTAPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASS 307

Query: 778  PVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGW 599
            P+P GIITHYMRP+NMAPRL+S+DF+KGW +CQLE+ EC++VPWP  +I++KYC++D GW
Sbjct: 308  PLPTGIITHYMRPINMAPRLISEDFIKGWLMCQLEIQECRKVPWPTPSIQDKYCVEDCGW 367

Query: 598  PSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQ 419
            P +D AYECKINLLTGRTHQ+RAQ AAC AP+VGDSMY+PA I +M+ PGLNPF +Y++ 
Sbjct: 368  PYQDFAYECKINLLTGRTHQIRAQFAACRAPLVGDSMYMPAAIGDMSNPGLNPFGKYKRD 427

Query: 418  YESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            + SE ++  AV  WIAQHGKEP VAIGLQACQISWDD +HFYE+G PWWR
Sbjct: 428  FSSESEKETAVVNWIAQHGKEPGVAIGLQACQISWDDDDHFYESGSPWWR 477


>gb|EYU33906.1| hypothetical protein MIMGU_mgv1a005451mg [Mimulus guttatus]
          Length = 483

 Score =  653 bits (1685), Expect = 0.0
 Identities = 317/466 (68%), Positives = 365/466 (78%), Gaps = 4/466 (0%)
 Frame = -2

Query: 1654 SSLRTSNCR-SFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTF-SCRTLKADVGAT 1481
            S L  S CR +F +P+ L RTLA+T     H      C+    NR+  S  +      ++
Sbjct: 18   SLLSASTCRRNFFIPINLARTLASTQSSFRHIHKHHICNAAHRNRSCESTASAYVSTDSS 77

Query: 1480 ISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFG 1301
            IS S+ + Y  Y RLLPCP QNGPPR+EH VV+ GGPVL+YIS +LN+P  FVADLIHFG
Sbjct: 78   ISTSNNNSYPPYGRLLPCPSQNGPPRVEHFVVTEGGPVLDYISKSLNIPSPFVADLIHFG 137

Query: 1300 AVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVE 1121
            AV+YALVCPDPPPTATPEQI  FKE T PS+LRKR SIKGKT REAQKTFRI+  +EFVE
Sbjct: 138  AVFYALVCPDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFRISRTDEFVE 197

Query: 1120 VGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFAT 941
             GTYLRVHVHPKR PRCYE DW+SR+IAVA+SYVVLDKPAGTSVGGTTDNIEESC TF T
Sbjct: 198  TGTYLRVHVHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDNIEESCVTFTT 257

Query: 940  RALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGI 761
            RALGL  PL TTHQIDNCTEGCVVLARTK+YCS+FHGKIR             APV IG+
Sbjct: 258  RALGLEAPLITTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVSIGV 317

Query: 760  ITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSKDVA 581
            ITHYMRPVN+APRLVS+D + GWHLCQLEVLEC+++PWP++  EEK  ++D GWPSKD A
Sbjct: 318  ITHYMRPVNIAPRLVSEDLVNGWHLCQLEVLECRKIPWPSSIAEEKNRVEDCGWPSKDFA 377

Query: 580  YECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYESEDD 401
            YECK+NLLTGRTHQ+RAQ AACGAP+VGDSMY+PA IAE+  P LNPF + +K+Y S+D 
Sbjct: 378  YECKVNLLTGRTHQIRAQFAACGAPLVGDSMYMPAAIAEVDRPELNPFGKNKKEYASDDI 437

Query: 400  RTKAVEEWIAQHGKEPSVAIGLQACQISWDDGE--HFYEAGCPWWR 269
            +  AVEEWIA+HGKEP VAIGLQAC+ISWD  E  H YEAG PWWR
Sbjct: 438  KAVAVEEWIARHGKEPIVAIGLQACKISWDSDEEQHSYEAGRPWWR 483


>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
            lycopersicum]
          Length = 448

 Score =  653 bits (1684), Expect = 0.0
 Identities = 307/436 (70%), Positives = 359/436 (82%), Gaps = 1/436 (0%)
 Frame = -2

Query: 1573 KNHDRNLAFCSWGSTNRTFSCR-TLKADVGATISNSSFDGYSEYSRLLPCPLQNGPPRIE 1397
            KNH + LA     S +++F C+ T  +D+ +T    S +G+  Y RL+PCPLQN PPR+E
Sbjct: 16   KNHYKRLAL---SSCSKSFCCQSTALSDINSTSHTVSSNGHLRYGRLMPCPLQNSPPRVE 72

Query: 1396 HLVVSSGGPVLEYISNALNLPPLFVADLIHFGAVYYALVCPDPPPTATPEQIRVFKEVTA 1217
            HLVV+  GPV+EYI  AL+LPPL+V DLI FGAVYYALVCP PPPTA+PEQI+V++EVT 
Sbjct: 73   HLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTD 132

Query: 1216 PSVLRKRQSIKGKTVREAQKTFRITHVNEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIA 1037
            PSVLRKR SIKGKTVREAQKTF+IT  +E VE GTYLRVHVHPKR PRCY+IDWKSRIIA
Sbjct: 133  PSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIA 192

Query: 1036 VADSYVVLDKPAGTSVGGTTDNIEESCATFATRALGLPTPLKTTHQIDNCTEGCVVLART 857
            V D YVVLDKPAGTSVGGTTDNIEESCATFATRALG   PL TTHQIDNCTEGCVVLAR+
Sbjct: 193  VTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARS 252

Query: 856  KDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQL 677
            K+YCS+FHGKIR             APVPIGI+THYMRP+NMAPRLVS+DF+KGW LCQL
Sbjct: 253  KEYCSVFHGKIREKKVRKLYLALAAAPVPIGILTHYMRPINMAPRLVSRDFVKGWLLCQL 312

Query: 676  EVLECKEVPWPNAAIEEKYCIDDHGWPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVG 497
            EVLEC++VPWP++ I+  Y ++D GW  KD AYEC+INLLTGRTHQ+RAQLAAC AP+VG
Sbjct: 313  EVLECQKVPWPSSEIQRTYNLEDCGWALKDYAYECQINLLTGRTHQIRAQLAACSAPVVG 372

Query: 496  DSMYIPAVIAEMACPGLNPFSEYRKQYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQIS 317
            DSMY+PA IAE+ CPG NPF + +K Y +E+D++ A++EWIAQHGKEPSVA+GLQACQIS
Sbjct: 373  DSMYMPAAIAEIVCPGSNPFGKNKKLYSNENDKSLAIDEWIAQHGKEPSVAVGLQACQIS 432

Query: 316  WDDGEHFYEAGCPWWR 269
            WDDG+H Y A  PWWR
Sbjct: 433  WDDGQHCYGARMPWWR 448


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  650 bits (1677), Expect = 0.0
 Identities = 316/469 (67%), Positives = 369/469 (78%), Gaps = 6/469 (1%)
 Frame = -2

Query: 1657 VSSLRTSNCRSFA-VPMALVRTLA----TTYVLKNHDRNLAFCSWGSTNRTFSCRTLKAD 1493
            ++ + T  CR+ +    +L+RTLA    +     + D     CS GS +  F C++   D
Sbjct: 3    IALVATHGCRTLSSTSPSLLRTLARPRASLSAASSRDYFAPRCSLGSKSSAFPCKSSITD 62

Query: 1492 VGA-TISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVAD 1316
            V   T +NS+ +GY +Y RLLPCP  + PPR+EH+VV   GPV+EYI  +LNLPPL+VAD
Sbjct: 63   VTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVAD 122

Query: 1315 LIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHV 1136
            LIHFGAVYYALVCP PP TATPEQIR+FK  T PS L+ R+SIKGKTVREAQKTFRITHV
Sbjct: 123  LIHFGAVYYALVCPQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHV 182

Query: 1135 NEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESC 956
            +EFVEVGTYLRVHVHPKR PRCYEIDWKSRIIAV +SYVVLDKPAGTSVGGTTDNIEESC
Sbjct: 183  DEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 242

Query: 955  ATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAP 776
            ATFATRALGL +PL TTHQIDNCTEGCV+ ARTK+YCSIFHGKIR             AP
Sbjct: 243  ATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAP 302

Query: 775  VPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWP 596
            VP+GIITHYMRP+N+APRLVSKD + GW +CQLEVLEC+EV WP+A  E KY ++D GWP
Sbjct: 303  VPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADTEAKYRVEDCGWP 362

Query: 595  SKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQY 416
            SK  AYEC+INLLTGRTHQ+RAQLA CGAP+VGDSMY+PAV+AEM  PGLNPF + +K+Y
Sbjct: 363  SKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEY 422

Query: 415  ESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
             +E+D+  +V EW A HGKEP+VAIGLQA +ISWD  EH Y AG PWWR
Sbjct: 423  TNEEDKETSVAEWSALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWR 471


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  648 bits (1672), Expect = 0.0
 Identities = 317/469 (67%), Positives = 370/469 (78%), Gaps = 6/469 (1%)
 Frame = -2

Query: 1657 VSSLRTSNCRSFA-VPMALVRTLA----TTYVLKNHDRNLAFCSWGSTNRTFSCRTLKAD 1493
            ++ + T  CR+ +    +L+RTLA    +     + D      S GS +  F C++   D
Sbjct: 3    IALVATHGCRTLSSTSPSLLRTLARPRASLSAASSRDYFAPRRSLGSKSSAFPCKSSITD 62

Query: 1492 VGA-TISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVAD 1316
            V   T +NS+ +GY +Y RLLPCP  + PPR+EH+VV   GPV+EYI  +LNLPPL+VAD
Sbjct: 63   VTVKTATNSAENGYPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVAD 122

Query: 1315 LIHFGAVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHV 1136
            LIHFGAVYYALVCP PP TATPEQIR+FK+ T PS L+ R+SIKGKTVREAQKTFRITHV
Sbjct: 123  LIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHV 182

Query: 1135 NEFVEVGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESC 956
            +EFVEVGTYLRVHVHPKR PRCYEIDWKSRIIAV +SYVVLDKPAGTSVGGTTDNIEESC
Sbjct: 183  DEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESC 242

Query: 955  ATFATRALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAP 776
            ATFATRALGL +PL TTHQIDNCTEGCV+ ARTK+YCSIFHGKIR             AP
Sbjct: 243  ATFATRALGLTSPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAP 302

Query: 775  VPIGIITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWP 596
            VP+GIITHYMRP+N+APRLVSKD + GW +CQLEVLEC+EV WP+A IE KY ++D GWP
Sbjct: 303  VPMGIITHYMRPINIAPRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWP 362

Query: 595  SKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQY 416
            SK  AYEC+INLLTGRTHQ+RAQLA CGAP+VGDSMY+PAV+AEM  PGLNPF + +K+Y
Sbjct: 363  SKKKAYECRINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEY 422

Query: 415  ESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
             +E+D+  AV EW A HGKEP+VAIGLQA +ISWD  EH Y AG PWWR
Sbjct: 423  TNEEDKETAVAEWSALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  638 bits (1645), Expect = e-180
 Identities = 292/393 (74%), Positives = 339/393 (86%)
 Frame = -2

Query: 1447 YSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFGAVYYALVCPDP 1268
            Y RLLPCP QN PPR+EHLVV   GPVL+YI  AL+LPPLFVADLIHFGAV+YALVCP P
Sbjct: 3    YDRLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQP 62

Query: 1267 PPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVEVGTYLRVHVHP 1088
            PPTATPEQIR+F+E TAPSVL+KR SIKGKTVREAQKTFR++ V++F+EVGTYLRV+VHP
Sbjct: 63   PPTATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHP 122

Query: 1087 KRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFATRALGLPTPLKT 908
            +R PRCYEIDWKSRIIAV +SYVVLDKPAGTSVGGTT+NIEE+CATFATRALGL  PLKT
Sbjct: 123  RRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKT 182

Query: 907  THQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGIITHYMRPVNMA 728
            THQIDNCTEGCVVLART +YC +FHGKIR              PVP+G+ITHYMRP N+ 
Sbjct: 183  THQIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIP 242

Query: 727  PRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSKDVAYECKINLLTGR 548
            PRLVS++F++GW+LCQLEVLEC++VPWP+   EEKY ++D GWPSKD AYECKINLLTGR
Sbjct: 243  PRLVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGR 302

Query: 547  THQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYESEDDRTKAVEEWIAQ 368
            THQ+RAQLAACGAP+VGDSMY+PA IAEMA PG+NPF +++KQY  E+D +  V EW+ +
Sbjct: 303  THQIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVER 362

Query: 367  HGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            HGKEPS+AIGLQAC+ISW D +H Y+AG PWWR
Sbjct: 363  HGKEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_006858058.1| hypothetical protein AMTR_s00062p00043970 [Amborella trichopoda]
            gi|548862161|gb|ERN19525.1| hypothetical protein
            AMTR_s00062p00043970 [Amborella trichopoda]
          Length = 477

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/464 (65%), Positives = 358/464 (77%)
 Frame = -2

Query: 1660 LVSSLRTSNCRSFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTFSCRTLKADVGAT 1481
            L++S+ +SN R    P +L  T  T   L  H    A CSW  T R     ++      T
Sbjct: 14   LITSVWSSNWRQIVTPRSLSLTKVTAQFL-THSYRPAPCSWSFTKRLVGSTSI-TQANTT 71

Query: 1480 ISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFG 1301
            IS S  + Y  Y+ LLPCP +NGPPRIEHL+VS GGPVL+YI  AL+LP LFVADLIHFG
Sbjct: 72   ISTSPSNVYPGYTSLLPCPSKNGPPRIEHLIVSEGGPVLDYICKALDLPTLFVADLIHFG 131

Query: 1300 AVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVE 1121
            AVYYALV P+PPP+ATPEQ+++FKE TA SVLRKR S+KGKTVREAQKTFRITH NEFVE
Sbjct: 132  AVYYALVSPEPPPSATPEQVKLFKEATARSVLRKRASLKGKTVREAQKTFRITHANEFVE 191

Query: 1120 VGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFAT 941
             GTYLRV+VHPKR PRCYEIDW+SR+IA  +SYVVLDKPA T+VGGT  NIEE CATF +
Sbjct: 192  EGTYLRVYVHPKRFPRCYEIDWRSRVIAETESYVVLDKPAATTVGGTPCNIEECCATFVS 251

Query: 940  RALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGI 761
            RALGL  PL+TTHQIDNCTEGCVV ++TK++CSIFHGKIR             APVP+G+
Sbjct: 252  RALGLDFPLRTTHQIDNCTEGCVVFSKTKEFCSIFHGKIREKQVKKLYLALATAPVPVGV 311

Query: 760  ITHYMRPVNMAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSKDVA 581
            I+HYMRPVN APR++SKD + GWHLCQLEVLECKEVPWP AA+E +  ++D GWPSKD A
Sbjct: 312  ISHYMRPVNRAPRIISKDHIGGWHLCQLEVLECKEVPWPRAAVEAQNGVEDCGWPSKDFA 371

Query: 580  YECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYESEDD 401
            YECKINLLTGRTHQ+RAQLAACGAPIVGD+MY+PA I E+A P +NPF E   +   ++ 
Sbjct: 372  YECKINLLTGRTHQIRAQLAACGAPIVGDTMYLPASIKEIAFPNINPFCEANSESMCDES 431

Query: 400  RTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            + +AVEEWIAQHGKEP+ AIGLQAC+ISWD G  FY A  PWWR
Sbjct: 432  KGEAVEEWIAQHGKEPNAAIGLQACEISWDGGACFYTARAPWWR 475


>ref|XP_004145102.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  634 bits (1636), Expect = e-179
 Identities = 306/455 (67%), Positives = 359/455 (78%), Gaps = 2/455 (0%)
 Frame = -2

Query: 1627 SFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTFSCRTLKADVGAT--ISNSSFDGY 1454
            S  +P  + RT A      +     A  S+   ++ F C +   DV  T   +NS+ +GY
Sbjct: 17   SLNLPREVARTRANLSASISSTCFAALRSFSFNSKAFPCESSTTDVNVTQTATNSAENGY 76

Query: 1453 SEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFGAVYYALVCP 1274
             +Y RLLPC   N PPR+EHLVV  GGPV+EYIS +L+LPP++VADLIHFGAVYYALVCP
Sbjct: 77   PQYHRLLPCTSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCP 136

Query: 1273 DPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVEVGTYLRVHV 1094
             PPPTA+ E+IR+FK+ T PS L  R+SIKGKT+REAQKTFRITH++EFVEVGTYLRV+V
Sbjct: 137  QPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYV 196

Query: 1093 HPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFATRALGLPTPL 914
            HPKR PRCYE+DWKSRIIAV DSYVVLDKPAGTSVGGTT+NIEE+C TFATRALGL +PL
Sbjct: 197  HPKRFPRCYEVDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPL 256

Query: 913  KTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGIITHYMRPVN 734
             TTHQIDNCTEGCV+LARTK+YCSIFH KIR              P+P GI+THYMRP N
Sbjct: 257  WTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVTKLYLALVAVPLPKGIMTHYMRPNN 316

Query: 733  MAPRLVSKDFMKGWHLCQLEVLECKEVPWPNAAIEEKYCIDDHGWPSKDVAYECKINLLT 554
            +APRLVS+D + GW+LCQLEVLEC+EV WP+A IE KY I+D GWPSK  A+ECKINLLT
Sbjct: 317  LAPRLVSRDCIDGWNLCQLEVLECREVSWPDADIEAKYSIEDCGWPSKKKAFECKINLLT 376

Query: 553  GRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPFSEYRKQYESEDDRTKAVEEWI 374
            GRTHQ+RAQLA CGAP+VGDSMY+PAV+AEMA PGLNPF + +K+Y SE+D+  AV EWI
Sbjct: 377  GRTHQIRAQLADCGAPLVGDSMYMPAVVAEMANPGLNPFGKCKKEYTSEEDKENAVAEWI 436

Query: 373  AQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
            A HGKEP+VAIGLQA +ISWD  EH Y AG PWWR
Sbjct: 437  ALHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_004486127.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cicer arietinum]
          Length = 467

 Score =  633 bits (1633), Expect = e-179
 Identities = 310/476 (65%), Positives = 353/476 (74%), Gaps = 12/476 (2%)
 Frame = -2

Query: 1660 LVSSLRTSNCRSFAVPMALVRTLATTYVLKNHDRNLAFCSWGSTNRTFSCRTLKADVGAT 1481
            + S L   +CRS AVP     T    ++  N   N     W       SCR+        
Sbjct: 6    VASILFAGSCRSLAVPS----TARALHISLNKHLNKHAFGW-------SCRSSHNSSAVA 54

Query: 1480 ISNSSFDGYSEYSRLLPCPLQNGPPRIEHLVVSSGGPVLEYISNALNLPPLFVADLIHFG 1301
             S S    Y +Y+RLLPCP    PPRIEH+VVS GGPVLEYI  AL+LPPLFVADLI FG
Sbjct: 55   FSLS----YPKYNRLLPCPTHKIPPRIEHIVVSEGGPVLEYICKALDLPPLFVADLIKFG 110

Query: 1300 AVYYALVCPDPPPTATPEQIRVFKEVTAPSVLRKRQSIKGKTVREAQKTFRITHVNEFVE 1121
            AVY+ALVCP PPPTAT E+IRVFK+ T P VLRKR SIKGKT+REAQKTF +T V++FVE
Sbjct: 111  AVYFALVCPKPPPTATAEEIRVFKKATEPLVLRKRASIKGKTIREAQKTFLVTDVDQFVE 170

Query: 1120 VGTYLRVHVHPKRSPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTTDNIEESCATFAT 941
             GTYLRVHVHPKR PRCYEIDW+SRIIAV +SYV+LDKPAGTSVGGTT N EESCA FAT
Sbjct: 171  PGTYLRVHVHPKRFPRCYEIDWRSRIIAVEESYVILDKPAGTSVGGTTGNTEESCANFAT 230

Query: 940  RALGLPTPLKTTHQIDNCTEGCVVLARTKDYCSIFHGKIRXXXXXXXXXXXXXAPVPIGI 761
            RAL L TPL TTHQIDNCTEGCVVLAR K+YCS+FHGKIR             +P+P GI
Sbjct: 231  RALELTTPLMTTHQIDNCTEGCVVLARNKEYCSVFHGKIREKKVKKIYLALAASPLPTGI 290

Query: 760  ITHYMRPVNMAPRLVSKD------------FMKGWHLCQLEVLECKEVPWPNAAIEEKYC 617
            I HYMRP+NMAPRL+S+             F KGWH+CQLEVLEC ++PWP   ++EKYC
Sbjct: 291  IKHYMRPINMAPRLISEGXTTQIGMHSKDYFNKGWHICQLEVLECIKIPWPTTVVQEKYC 350

Query: 616  IDDHGWPSKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYIPAVIAEMACPGLNPF 437
            ++D GWPS+D AYECKINLLTGRTHQ+RAQ AAC AP++GDSMY+PA IAEM  PGLNPF
Sbjct: 351  VEDCGWPSQDYAYECKINLLTGRTHQIRAQFAACKAPLIGDSMYMPAAIAEMMNPGLNPF 410

Query: 436  SEYRKQYESEDDRTKAVEEWIAQHGKEPSVAIGLQACQISWDDGEHFYEAGCPWWR 269
             +Y+K + SE ++  AV  WIAQHGKEPSVAIGLQACQISWDDGEH YEAG PWWR
Sbjct: 411  GKYKKDFTSESEKETAVINWIAQHGKEPSVAIGLQACQISWDDGEHIYEAGSPWWR 466