BLASTX nr result
ID: Akebia24_contig00010993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00010993
(307 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnoli... 74 2e-11
ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) ... 74 2e-11
ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chlorop... 74 2e-11
ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwan... 74 2e-11
ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) ... 73 4e-11
ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) ... 73 4e-11
ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) ... 73 4e-11
ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) ... 72 1e-10
ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) ... 71 1e-10
ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) ... 71 2e-10
ref|YP_004327719.1| hypothetical chloroplast RF1 [Hevea brasilie... 70 2e-10
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 70 3e-10
ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [... 70 4e-10
dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 70 4e-10
dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 70 4e-10
dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 70 4e-10
ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera] g... 70 4e-10
ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ... 69 7e-10
ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) ... 69 7e-10
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 68 1e-09
>ref|YP_009026939.1| photosystem I assembly protein Ycf1 [Magnolia tripetala]
gi|608608461|gb|AHW52015.1| photosystem I assembly
protein Ycf1 [Magnolia tripetala]
Length = 1846
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEAENEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 653
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + EE+ LI Y +QSDF RDLIKG
Sbjct: 654 NTNTYTST----STNSDQAEEVALIRYSQQSDFRRDLIKG 689
>ref|YP_008993320.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia dealbata]
Length = 1846
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 596 IEEIGKKVPRWSYKLTDRLEEQEEGNEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 653
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + EE+ LI Y +QSDF RDLIKG
Sbjct: 654 NTNTYTST----STNSDQAEEVALIRYSQQSDFRRDLIKG 689
>ref|YP_007474593.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora] gi|372862899|gb|AEX98975.1| photosystem I
assembly protein Ycf1 (chloroplast) [Magnolia
grandiflora]
Length = 1843
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEAENEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 653
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + EE+ LI Y +QSDF RDLIKG
Sbjct: 654 NTNTYTST----STNSDQAEEVALIRYSQQSDFRRDLIKG 689
>ref|YP_004769771.1| hypothetical chloroplast RF19 [Magnolia kwangsiensis]
gi|302424237|gb|ADL39113.1| hypothetical chloroplast
RF19 [Magnolia kwangsiensis]
Length = 1838
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 593 IEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 650
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + EE+ LI Y +QSDF RDLIKG
Sbjct: 651 NTNTYTST----STNSDQAEEVALIRYSQQSDFRRDLIKG 686
>ref|YP_008993922.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sprengeri]
Length = 1846
Score = 73.2 bits (178), Expect = 4e-11
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 653
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + +E+ LI Y +QSDF RDLIKG
Sbjct: 654 NTNTYTST----STNSDQAQEVALIRYSQQSDFRRDLIKG 689
>ref|YP_008993836.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia sinica]
Length = 1841
Score = 73.2 bits (178), Expect = 4e-11
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 593 IEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 650
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + +E+ LI Y +QSDF RDLIKG
Sbjct: 651 NTNTYTST----STNSDQAQEVALIRYSQQSDFRRDLIKG 686
>ref|YP_008993234.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia cathcartii]
Length = 1837
Score = 73.2 bits (178), Expect = 4e-11
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ T+N Q
Sbjct: 587 IEEIGKKVPRWSYKLTDRLEGQEEENEEESTEDH-GIRSRKAKRVVIYTDNDQN-TNNDQ 644
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + +E+ LI Y +QSDF RDLIKG
Sbjct: 645 NTNTYTST----STNSDQAQEVALIRYSQQSDFRRDLIKG 680
>ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense]
gi|403226837|gb|AFR25716.1| hypothetical chloroplast
RF19 (chloroplast) [Penthorum chinense]
Length = 1805
Score = 71.6 bits (174), Expect = 1e-10
Identities = 47/101 (46%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGS-LGIRPRKSKRVVIFTDNEVLLTDNK 126
IKEINKK+ W+YKL GIR RK+KRVVIFTDN+
Sbjct: 576 IKEINKKVPRWSYKLIDDLEQQERETETEEDMPEDPGIRSRKAKRVVIFTDNQ------- 628
Query: 125 QNINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
QN +TYT+ D T+N +E+ LI Y +QSDF RDLIKG
Sbjct: 629 QNTDTYTNTTD--TNNPDPTDEVALIRYSQQSDFRRDLIKG 667
>ref|YP_008993664.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia odora]
Length = 1852
Score = 71.2 bits (173), Expect = 1e-10
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLL----- 138
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+
Sbjct: 596 IEEIGKKVPRWSYKLTDRLEGQEEENEEESTEDH-GIRSRKAKRVVIYTDNDQNTNNDQN 654
Query: 137 TDNKQNINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
T+N QN NTYTS ++N + +E+ LI Y +QSDF RDLIKG
Sbjct: 655 TNNDQNANTYTST----STNSDQAQEVALIRYSQQSDFRRDLIKG 695
>ref|YP_008993406.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia pyramidata]
Length = 1858
Score = 70.9 bits (172), Expect = 2e-10
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLL----- 138
I+EI KK+ W+YKL G GIR RK+KRVVI+TDN+
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEEGNEEESTEGH-GIRSRKAKRVVIYTDNDQNTNNDQN 654
Query: 137 ------TDNKQNINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
T+N QN NTYTS ++N + EE+ LI Y +QSDF R+LIKG
Sbjct: 655 TDNDQNTNNDQNTNTYTST----STNSDQAEEVALIRYSQQSDFRRNLIKG 701
>ref|YP_004327719.1| hypothetical chloroplast RF1 [Hevea brasiliensis]
gi|308523562|gb|ADO33612.1| hypothetical chloroplast RF1
[Hevea brasiliensis]
Length = 1899
Score = 70.5 bits (171), Expect = 2e-10
Identities = 44/100 (44%), Positives = 58/100 (58%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
IKEI+K++ W+YKL IR RK+KRVVIFTDN K+
Sbjct: 633 IKEISKQVPRWSYKLIDDLEQQEGENEENMSE-DYEIRSRKAKRVVIFTDN-------KK 684
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N +TY + D T+N ++EE+ LIHY +QSDF RD+IKG
Sbjct: 685 NTDTYNNTKD--TTNSDQIEEVTLIHYSQQSDFRRDIIKG 722
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 70.1 bits (170), Expect = 3e-10
Identities = 45/100 (45%), Positives = 56/100 (56%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+ Q
Sbjct: 593 IEEIGKKVPRWSYKLTDHLEEQEKENEEESTEDH-GIRSRKAKRVVIYTDND-------Q 644
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N NTYTS ++N + EE+ LI Y +QSDF RDLIKG
Sbjct: 645 NTNTYTST----STNSDQAEELALIRYSQQSDFRRDLIKG 680
>ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [Vitis rotundifolia]
gi|586947471|gb|AHJ91268.1| hypothetical chloroplast RF1
(chloroplast) [Vitis rotundifolia]
Length = 1893
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
IKEI+KK+ W+YKL IR RKSK VVIFTDN+ Q
Sbjct: 633 IKEISKKVPRWSYKLMKNEEEGETLVVYQE------IRSRKSKHVVIFTDNQ-------Q 679
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N +TYT+N ++ N + E+ LI Y +QSDF RD+IKG
Sbjct: 680 NADTYTANANKDIDNSEQTNEVALIRYSQQSDFRRDIIKG 719
>dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
IKEI+KK+ W+YKL IR RKSK VVIFTDN+ Q
Sbjct: 633 IKEISKKVPRWSYKLMKNEEEGETLVVYQE------IRSRKSKHVVIFTDNQ-------Q 679
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N +TYT+N ++ N + E+ LI Y +QSDF RD+IKG
Sbjct: 680 NADTYTANANKDIDNSEQTNEVALIRYSQQSDFRRDIIKG 719
>dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
IKEI+KK+ W+YKL IR RKSK VVIFTDN+ Q
Sbjct: 633 IKEISKKVPRWSYKLMKNEEEGETLVVYQE------IRSRKSKHVVIFTDNQ-------Q 679
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N +TYT+N ++ N + E+ LI Y +QSDF RD+IKG
Sbjct: 680 NADTYTANANKDIDNSEQTNEVALIRYSQQSDFRRDIIKG 719
>dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
IKEI+KK+ W+YKL IR RKSK VVIFTDN+ Q
Sbjct: 633 IKEISKKVPRWSYKLMKNEEEGETLVVYQE------IRSRKSKHVVIFTDNQ-------Q 679
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N +TYT+N ++ N + E+ LI Y +QSDF RD+IKG
Sbjct: 680 NADTYTANANKDIDNSEQTNEVALIRYSQQSDFRRDIIKG 719
>ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera]
gi|118577986|sp|Q0ZIW0.1|YCF1_VITVI RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|91701709|gb|ABE47593.1| hypothetical chloroplast RF1
[Vitis vinifera]
Length = 1893
Score = 69.7 bits (169), Expect = 4e-10
Identities = 43/100 (43%), Positives = 55/100 (55%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLLTDNKQ 123
IKEI+KK+ W+YKL IR RKSK VVIFTDN+ Q
Sbjct: 633 IKEISKKVPRWSYKLMKNEEEGETLVVYQE------IRSRKSKHVVIFTDNQ-------Q 679
Query: 122 NINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
N +TYT+N ++ N + E+ LI Y +QSDF RD+IKG
Sbjct: 680 NADTYTANANKDIDNSEQTNEVALIRYSQQSDFRRDIIKG 719
>ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia]
Length = 1858
Score = 68.9 bits (167), Expect = 7e-10
Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLL----- 138
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEEENEEESTEDH-GIRSRKAKRVVIYTDNDQNTNNDQN 654
Query: 137 ------TDNKQNINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
T+N QN NTYTS ++N + +E+ LI Y +QSDF RDLIKG
Sbjct: 655 TNNDQNTNNDQNTNTYTST----STNSDQAQEVALIRYSQQSDFRRDLIKG 701
>ref|YP_008993492.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia kobus]
Length = 1858
Score = 68.9 bits (167), Expect = 7e-10
Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLL----- 138
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEQENEEESTEDH-GIRSRKAKRVVIYTDNDQNTNNDEN 654
Query: 137 ------TDNKQNINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
T+N QN NTYTS ++N + +E+ LI Y +QSDF RDLIKG
Sbjct: 655 TNNDQNTNNDQNTNTYTST----STNSDQAQEVALIRYSQQSDFRRDLIKG 701
>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 1863
Score = 68.2 bits (165), Expect = 1e-09
Identities = 47/117 (40%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Frame = -3
Query: 302 IKEINKKMTPWAYKLXXXXXXXXXXXXXXXXPGSLGIRPRKSKRVVIFTDNEVLL----- 138
I+EI KK+ W+YKL GIR RK+KRVVI+TDN+
Sbjct: 596 IEEIGKKVPRWSYKLTDHLEEQEAENEEESTENH-GIRSRKAKRVVIYTDNDQNTNNDQN 654
Query: 137 ------------TDNKQNINTYTSNHDEITSNRAEMEEMFLIHYVKQSDFCRDLIKG 3
T+N QN NTYTS ++N + EE+ LI Y +QSDF RDLIKG
Sbjct: 655 TNNDQNTNNDQNTNNDQNTNTYTST----STNSDQAEEVALIRYSQQSDFRRDLIKG 707