BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00007763
         (4011 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1840   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1780   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1773   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1769   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1768   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1749   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1748   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1743   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1743   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1736   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1729   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1722   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...  1670   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...  1654   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1646   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1637   0.0  
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...  1633   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1627   0.0  
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...  1621   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1617   0.0  

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1840 bits (4767), Expect = 0.0
 Identities = 902/1166 (77%), Positives = 1013/1166 (86%)
 Frame = -1

Query: 3858 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQK 3679
            PDY+ L++L + HIDSFDH V+ GLET+L  +KP                          
Sbjct: 6    PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP-------------------------- 39

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
             R   + R+ALYP ECR+AKI+Y+G+   +VCFQY +G  +REK N G  PIMLKSK+CH
Sbjct: 40   -RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCH 98

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRGADPQKL+  KEE+SEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SFR+R+EGYTD
Sbjct: 99   LRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 158

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRCVR+DQS+++VKLYYL+NGSARLGFWI+GREYLLPVGVVLKALIDT DHEIY S
Sbjct: 159  KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 218

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LTCCYSEKY+ GKGAVGTQLVGERVKIILDEV+ LSL T+ QCLQH+G +F+ VMDGLE 
Sbjct: 219  LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 278

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            ES+  V  AVLR+Y+FVHL++N+DKFNLLIFM+QKLF+L+DQT+ PDNPD LQ QEVLLP
Sbjct: 279  ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 338

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLITI+LKEKLQEWLYKARRLL +EI NK ++FEF SLAH+KK++DKNPS+ ISL VEN
Sbjct: 339  GHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKVMDKNPSRQISLAVEN 397

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG LVTQSGLD+QQRAGMTV AERLNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 398  MLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 457

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            AWGFLCPVHTPDGEPCGLLNHM STCR+TS+FDS+GN +DFFKIR+SILSVL GIGMTP+
Sbjct: 458  AWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPA 517

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LPKLV+AGPPEVL+V+LDGRV        VE AV+++RRLK+S  + IP+DLEVGY+PLS
Sbjct: 518  LPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLS 577

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYLFTSPSRF+RPVRNISIPSEE  DIELIGPFEQVYMEI+C DG DGGR+NI
Sbjct: 578  MGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNI 637

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTMAFSSQAI  RADQKLYH
Sbjct: 638  FPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYH 697

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            LQTPQTPIVRT+AY KY+MDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RG+CHG I
Sbjct: 698  LQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQI 757

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL DE   SD   ++F RSN DKS +S IDSDGLP+VGQ++ PNEPYCSIYN +
Sbjct: 758  YQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEV 817

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S+T+   LKGSEPVIVDYVA+D KN K P QKVN+RFRR RNP+IGDKFSSRHGQKGVC
Sbjct: 818  TSSTRATKLKGSEPVIVDYVALDAKNKKHP-QKVNIRFRRPRNPIIGDKFSSRHGQKGVC 876

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKFVDATPF+ 
Sbjct: 877  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSD 936

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            S++ ANGE      SLVDELG MLTS+GFNYHG+EVLYSG  G E+ CEIFIGPVYYQRL
Sbjct: 937  SLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRL 996

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD+MLAHGAAYLLHDRLHTCS
Sbjct: 997  RHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCS 1056

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            DHHIADVCSLCGSILTTS IQPQKRAVREIGGLPPGR PKKV CHAC+TSKGMETV+MPY
Sbjct: 1057 DHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPY 1116

Query: 438  VFRYLAAELAAMNIKMTLKLSNRAEA 361
            +FR+LAAELAAMNIKMTL+LSN A A
Sbjct: 1117 IFRFLAAELAAMNIKMTLQLSNGAGA 1142


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1780 bits (4611), Expect = 0.0
 Identities = 874/1123 (77%), Positives = 981/1123 (87%)
 Frame = -1

Query: 3729 TKLQISFGEHELYPPQKERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVRE 3550
            T++ + FG+ ELYPPQKER   + R+ALYP ECR+AKI+Y+G+   +VCFQY +G  +RE
Sbjct: 15   TRIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIRE 74

Query: 3549 KMNFGHLPIMLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYP 3370
            K N G  PIMLKSK+CHLRGADPQKL+  KEE+SEMGGYFILNGLER+ RLLI+PKRNYP
Sbjct: 75   KFNLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 134

Query: 3369 MSVVRVSFRERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVG 3190
            MS+VR SFR+R+EGYTDKAV+IRCVR+DQS+++VKLYYL+NGSARLGFWI+GREYLLPVG
Sbjct: 135  MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194

Query: 3189 VVLKALIDTNDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQC 3010
            VVLKALIDT DHEIY SLTCCYSEKY+ GKGAVGTQLVGERVKIILDEV+ LSL T+ QC
Sbjct: 195  VVLKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQC 254

Query: 3009 LQHLGAYFKPVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQT 2830
            LQH+G +F+ VMDGLE ES+  V  AVLR+Y+FVHL++N+DKFNLLIFM+QKLF+L+DQT
Sbjct: 255  LQHIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQT 314

Query: 2829 ATPDNPDALQTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIK 2650
            + PDNPD LQ QEVLLPGHLITI+LKEKLQEWLYKARRLL +EI NK ++FEF SLAH+K
Sbjct: 315  SVPDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVK 373

Query: 2649 KIIDKNPSKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRG 2470
            K++DKNPS+ ISL VENMLKTG LVTQSGLD+QQRAGMTV AERLNFLRFLSHFRAVHRG
Sbjct: 374  KVMDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRG 433

Query: 2469 ASFAGLRSTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFK 2290
            ASFAGLR+TSVRKLLPEAWGFLCPVHTPDGEPCGLLNHM STCR+TS+FDS+GN +DFFK
Sbjct: 434  ASFAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFK 493

Query: 2289 IRLSILSVLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLS 2110
            IR+SILSVL GIGMTP+LPKLV+AGPPEVL+V+LDGRV        VE AV+++RRLK+S
Sbjct: 494  IRMSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVS 553

Query: 2109 ESAGIPNDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQV 1930
              + IP+DLEVGY+PLSMGGAYPGLYLFTSPSRF+RPVRNISIPSEE  DIELIGPFEQV
Sbjct: 554  AISVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQV 613

Query: 1929 YMEIKCADGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTM 1750
            YMEI+C DG DGGR+NIFPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQM KQTM
Sbjct: 614  YMEIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTM 673

Query: 1749 AFSSQAIQFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDA 1570
            AFSSQAI  RADQKLYHLQTPQTPIVRT+AY KY+MDEFPTGTNAIVAVLAY+GYDMEDA
Sbjct: 674  AFSSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDA 733

Query: 1569 MILNKSSVERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFV 1390
            MILNKSSV+RG+CHG IYQ ET+DL DE   SD   ++F RSN DKS +S IDSDGLP+V
Sbjct: 734  MILNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYV 793

Query: 1389 GQIVQPNEPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRN 1210
            GQ++ PNEPYCSIYN ++S+T+   LKGSEPVIVDYVA+D KN K P QKVN+RFRR RN
Sbjct: 794  GQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKHP-QKVNIRFRRPRN 852

Query: 1209 PVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAA 1030
            P+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AA
Sbjct: 853  PIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAA 912

Query: 1029 KGGSLHGKFVDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLG 850
            KGGSLHGKFVDATPF+ S++ ANGE      SLVDELG MLTS+GFNYHG+EVLYSG  G
Sbjct: 913  KGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYG 972

Query: 849  IEMPCEIFIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAM 670
             E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD+M
Sbjct: 973  TELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSM 1032

Query: 669  LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVI 490
            LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTS IQPQKRA                 
Sbjct: 1033 LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRA----------------- 1075

Query: 489  CHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSNRAEA 361
                 TSKGMETV+MPY+FR+LAAELAAMNIKMTL+LSN A A
Sbjct: 1076 -----TSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGAGA 1113


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1773 bits (4593), Expect = 0.0
 Identities = 864/1164 (74%), Positives = 997/1164 (85%)
 Frame = -1

Query: 3858 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQK 3679
            PD++ L++L K HI+SFD+ VDAGL+TML  IKP+ VF+ +T TKL+I      LYPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
            ER   + REAL P ECR+AKI+Y+G+ +++VCFQYNDGP++RE +NFG  PIML+SK+C+
Sbjct: 69   ERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCN 128

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRGADPQKL+ +KEEASEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRCVR DQSS+SV+LYYL+NGSARLGFW+RGREYLLPVG++LKALIDT D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LT CY+EKY++GKGAVGTQLVGER KIILDE++ LSL T+LQCL+++G +F+PVM+ L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            +S+  V  AVL+D + VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLIT++LKEKL++WL K RRLLL+EI  K + F+F  +  +KK++DKN  K +S  VEN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG LVTQ+GLD+QQRAG TV AERLNFLRFLSHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT T R+TS FDSQGNIKD+FKI++SIL+VL  +GMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LPK+   GPPE L VLLDG V        VEK V++IR LK+S  A IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYL TSPSRF+RPVRNISI S+   +IELIGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            LQTPQTPIVRT+ YTKYN+DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL ++ G SD + ++F +SN +KS   SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 789  YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S+      KGSE V VDYVA D KN KK LQKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 849  TSSIHTLKRKGSEAVYVDYVAADVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 907

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 908  SQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 967

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            S+   +GE      SLVD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 968  SVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1027

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1028 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1087

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            D+HIADVCSLCGS+L T+FIQPQKR VREIGGLPPGR PKKV CHAC+TSKGMETVAMPY
Sbjct: 1088 DYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPY 1147

Query: 438  VFRYLAAELAAMNIKMTLKLSNRA 367
            VFRYLAAELAAMNIKMTLKLS+ A
Sbjct: 1148 VFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1769 bits (4581), Expect = 0.0
 Identities = 847/1164 (72%), Positives = 999/1164 (85%), Gaps = 1/1164 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQKE 3676
            DY+ L++L + HI+SFDH VDAGLET+++ IKP+ +++ +T  KL+I  G+ ELYPPQKE
Sbjct: 10   DYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKE 69

Query: 3675 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3496
            R + + REAL P+ECR+AKI+Y G+F  +VCFQY++  V+REK NFG  PIMLKSK+CHL
Sbjct: 70   RNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSKLCHL 129

Query: 3495 RGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDK 3316
            RG DP+KL+ + EEASEMGGYF++NGLER+ RLLI PKRNYP S+VR SF +R+EGYTDK
Sbjct: 130  RGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYTDK 189

Query: 3315 AVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVSL 3136
            AV+IRCVR+DQSS++VKLYYL+NGSARLGFW++G+EYLLP+GVVLKALIDT DHEIY SL
Sbjct: 190  AVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYASL 249

Query: 3135 TCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLETE 2956
            T CYS+K+ + KGAVGTQLVGER KIILDEV+ L+L    QCL H+G +F+PVM+GL  E
Sbjct: 250  TSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLGKE 309

Query: 2955 SHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLPG 2776
                V  AVL+DY+FVHL++N+DKFNLLIFM QKLF+L+DQT+ PDNPD+LQ Q+VLLPG
Sbjct: 310  KFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLLPG 369

Query: 2775 HLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVENM 2596
             LIT++LKEKL++WL K ++LL +EI N  ++FEF SLAH+KK++DKNPSK +S  VENM
Sbjct: 370  QLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVENM 429

Query: 2595 LKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPEA 2416
            LKTG LVTQ+GLD+QQRAG TV AERLNFLRF+SHFRAVHRGASFAGLR+T+VRKLLPE+
Sbjct: 430  LKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 2415 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPSL 2236
            WGFLCPVHTPDGEPCGLLNH+TSTCR+TSHF+SQG ++DF+KIR SILSVL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIPSL 549

Query: 2235 PKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLSM 2056
            PKLV+ G P+ L VLLDGR+        VEK V+++RRLK+     IP+DLEVGYVPLS+
Sbjct: 550  PKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPLSI 609

Query: 2055 GGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNIF 1876
             GAYPGLYLFTSPSRF+RPV+N+SI  E++ +IELIGPFEQV+MEI+C DGGDGGRK+ F
Sbjct: 610  SGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKDEF 669

Query: 1875 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 1696
            PATHEEIHPTG+LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS QAI++RADQKLYHL
Sbjct: 670  PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLYHL 729

Query: 1695 QTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHIY 1516
            QTPQTPIVRT+ YTKYN+DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG IY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1515 QLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTIS 1336
            Q ET+DL D+   S  + K+F RSN D S+ S ID+DGLP+VGQ++QP+EPYCSIY+ ++
Sbjct: 790  QTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDEVA 849

Query: 1335 STTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVCS 1156
             TT+   LKGSE VIVDYV++D KN   P QKVN+RFRR RNP+IGDKFSSRHGQKGVCS
Sbjct: 850  GTTRTMKLKGSEAVIVDYVSVDVKNKNNP-QKVNIRFRRPRNPMIGDKFSSRHGQKGVCS 908

Query: 1155 QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFASS 976
            QLWPD+DMPF G TGMRPDLIINPHAFPSRMTI ML ES+AAKGG L+G+FV+ATPF SS
Sbjct: 909  QLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSS 968

Query: 975  I-KTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            + KT  G+      +LVDELG  L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 969  VNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1028

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDK+QVRSTGT+DQVTRQP          RFGEMERD+MLAHGA+YLLHDRLHTCS
Sbjct: 1029 RHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCS 1088

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            DHHIADVCSLCGS+LT+SF+QP KRAVREIGGLPPG+ PK+V CHACKTSKGMETVAMPY
Sbjct: 1089 DHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAMPY 1148

Query: 438  VFRYLAAELAAMNIKMTLKLSNRA 367
            VF+YLAAELAAMNIKMTL+LS+ A
Sbjct: 1149 VFKYLAAELAAMNIKMTLQLSSGA 1172


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1768 bits (4578), Expect = 0.0
 Identities = 858/1166 (73%), Positives = 996/1166 (85%)
 Frame = -1

Query: 3858 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQK 3679
            PD++ L++L K HI+SFD+  DAGLETML  IKPI VF+ +T TKL+I      LYPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
            ER   + REAL P ECR+AKI+YAG+ +++VCFQYNDGP++RE +NFG  PIML+SK+C+
Sbjct: 69   ERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCN 128

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRGADPQKL+ ++EEASEMGGYFILNGLER+ RLLI+PKRN+PMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTD 188

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KA++IRCVR DQSS+SV+LYYL+NGSARLGFW+RGREYLLPVG++LKALIDT D EIYV+
Sbjct: 189  KAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LT CY+EKY++GKGAVGTQLVGER KIILDE++ LSL T+LQCL+++G +F+PV+  L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKN 308

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            +S+  V  AVL+D + VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLIT++LKEKL++WL K +RLLL+EI  K + F+F  +  +KK++DKN  K +S  VEN
Sbjct: 369  GHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG LVTQ+GLD+QQRAG TV AERLNFLRF+SHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT T R+TS FDSQGN+KD+FKI++SIL+VL  +GMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPS 548

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LPK+   GPPE L VLLDG V         EK V++IR LK+S +A IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLS 608

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYL TSPSRF+RPVRNISIPS    +IE IGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYH
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            LQTPQTPIVRT+ YTKYN+DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL ++ G  D + ++F +SN +KS   SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 789  YQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S+      KGSE V VDYVA+D KN KK LQKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 849  TSSIHTLKRKGSEAVYVDYVAVDVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 907

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 908  SQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 967

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            S+K  +GE      S+VD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 968  SVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1027

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1028 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1087

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            D+HIADVCSLCGS+LTT+F QPQKR VREIGGLPPGR PKKV CHAC+TSKGMETVAMPY
Sbjct: 1088 DYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPY 1147

Query: 438  VFRYLAAELAAMNIKMTLKLSNRAEA 361
            VFRYLAAELAAMNIKMTLKLS+ A A
Sbjct: 1148 VFRYLAAELAAMNIKMTLKLSDGAGA 1173


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1749 bits (4529), Expect = 0.0
 Identities = 849/1167 (72%), Positives = 991/1167 (84%)
 Frame = -1

Query: 3873 SNLPSPDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHEL 3694
            S+L   ++  L+DL+KPHI+SFDH +DAGL+TM   IKP+ V  P   T L+IS    ++
Sbjct: 10   SSLDDANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKI 69

Query: 3693 YPPQKERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLK 3514
            + PQKERG +  R  LYP ECR+AKI+Y G F+ E+CFQY++GP+VREK NFG  PIML+
Sbjct: 70   FEPQKERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQ 129

Query: 3513 SKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQ 3334
            SK+C+LRGA P+KL+ +KEEASE+GGYFILNGLER+ RLLI+PKRNYPMS VR SF ER+
Sbjct: 130  SKLCNLRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERR 189

Query: 3333 EGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDH 3154
            EGYTDKAV+IRCVR DQ+S+S+KLYYL+NGSARLGFWI GREY+LPVG+VLKALIDT D 
Sbjct: 190  EGYTDKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDR 249

Query: 3153 EIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVM 2974
            EIYV+LT CY+EKY++GKGAVGTQLVGER KIILDEV+ LSL T+LQCLQ++G +F+P++
Sbjct: 250  EIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPIL 309

Query: 2973 DGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQ 2794
             GL+ ESH  V  AVLRDY+ VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ Q
Sbjct: 310  QGLKNESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQ 369

Query: 2793 EVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNIS 2614
            EVLLPGHLIT++LKEKL+EWL K +RLLL+EI+ KG +FEF  +A +KK+++KN +K IS
Sbjct: 370  EVLLPGHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGIS 429

Query: 2613 LTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVR 2434
              +ENMLKTG LVT +GLD+ QRAG TV AER+NFLRF+SHFRAVHRG+SFAGLR+T+VR
Sbjct: 430  TAIENMLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVR 489

Query: 2433 KLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGI 2254
            KLLPE+WGFLCPVHTPDGEPCGLLNHMT TCRVTS +DS+GNIKD+FKI+LSIL++L  I
Sbjct: 490  KLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEI 549

Query: 2253 GMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVG 2074
            GMT SLPK+   GPPEVL VLLDG +        VEK V++IR LK+S +A IPND+EVG
Sbjct: 550  GMTQSLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVG 609

Query: 2073 YVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDG 1894
            YVPLSMGGAYPGLYLFTSPSRF+RPVRN+SIPS  + ++ELIGPFEQV+MEI+C DGGDG
Sbjct: 610  YVPLSMGGAYPGLYLFTSPSRFVRPVRNLSIPSTNE-NVELIGPFEQVFMEIRCPDGGDG 668

Query: 1893 GRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRAD 1714
            GRK+ FPATHEEIHPTG+LSVV NLTPWSDHNQSPRNMYQCQMAKQTM FSSQ IQ RAD
Sbjct: 669  GRKSPFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRAD 728

Query: 1713 QKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 1534
            QKLYHLQTPQTPIVRT AY++Y++DE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGM
Sbjct: 729  QKLYHLQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 788

Query: 1533 CHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCS 1354
             HG IYQ ET+DL ++ G SD + ++F +S  DK    SIDSDGLP VGQ++ P+EPYCS
Sbjct: 789  FHGQIYQTETIDLTEKGGKSDQSARVFRKSKLDKPC-PSIDSDGLPHVGQMIWPDEPYCS 847

Query: 1353 IYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHG 1174
             YN +++ T  F  KGSEPV VDYVA+D K  KK L KVN+RFR  RNPVIGDKFSSRHG
Sbjct: 848  TYNEVTNKTYLFKKKGSEPVYVDYVAVDTKT-KKNLNKVNIRFRHPRNPVIGDKFSSRHG 906

Query: 1173 QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDA 994
            QKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKF DA
Sbjct: 907  QKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDA 966

Query: 993  TPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPV 814
            TPF SS+K  + E      SLVDELG ML   GFNYHG EVLYSGV G E+ CEIFIGPV
Sbjct: 967  TPFRSSVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPV 1026

Query: 813  YYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDR 634
            YYQRLRHMVSDK+QVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDR
Sbjct: 1027 YYQRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDR 1086

Query: 633  LHTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMET 454
            LHTCSD+HIADVCS+CGS+LTT+F QP+KR VREIGGLPP R P+KV CHAC++SKGME 
Sbjct: 1087 LHTCSDYHIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEK 1146

Query: 453  VAMPYVFRYLAAELAAMNIKMTLKLSN 373
            VAMPY+FRYLAAELAAMNIKMTLKL++
Sbjct: 1147 VAMPYIFRYLAAELAAMNIKMTLKLTD 1173


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1748 bits (4527), Expect = 0.0
 Identities = 853/1170 (72%), Positives = 993/1170 (84%), Gaps = 5/1170 (0%)
 Frame = -1

Query: 3858 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQK 3679
            PD++ L++L K HI+SFDH V AGLET L  IKPI V + +T TKL+I      +YPPQK
Sbjct: 9    PDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQK 68

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
            ER   + REAL P ECR+AKI+YAG+ +++VCFQYNDGPV+RE +NFG  PIML+SK+C+
Sbjct: 69   ERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKLCN 128

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRGADP+KL+  KEEASEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTD 188

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRCVR DQSS+S++LYYL+NGSARLGFW+RGREYLLPVG+VLKALIDT D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVN 248

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LT CY+EKY +GKGAVGTQLVGER KIILDE++ LSL T+ QCL+++G +F+P+M  L  
Sbjct: 249  LTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMK 308

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            +S+  V  AVL+D + VHL+++ DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLI++++KEKL++WL K ++LL++EI+ K   F+F  +A +KKI+DKN +K +S +VEN
Sbjct: 369  GHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVEN 428

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            +LKTG LVTQ+GLD+QQRAG TV AERLNFLRF+SHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  LLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TS FDSQGNIKD+FKI+ SI  +L  +GMT S
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSS 548

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LPK+   GPPE L VLLDG V        VEK V+YIR LK+S ++ IP D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLS 608

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYLFTSPSRF+RPV+NISIPS     IELIGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRKSS 668

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQ IQ RADQKLYH
Sbjct: 669  FPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYH 728

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            LQTPQTPIVRT+ YTKYN+DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 729  LQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 788

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL ++RG SD + ++F +SN +K    SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 789  YQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSIYNEV 848

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S+T+ +  KGSE V VDYVA+D KN KK +QKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 849  TSSTQTYKRKGSEAVYVDYVAVDVKN-KKHIQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 907

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 908  SQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 967

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            S K           SLVD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 968  STKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1027

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1028 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1087

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIP-----KKVICHACKTSKGMET 454
            D+HIADVCSLCGS+L+T+FIQPQKR VR+IGGLPPGR+P     KKV CHAC+TSKGMET
Sbjct: 1088 DYHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGMET 1147

Query: 453  VAMPYVFRYLAAELAAMNIKMTLKLSNRAE 364
            VAMPYVFRYLAAELAAMNIKMTLKL++ AE
Sbjct: 1148 VAMPYVFRYLAAELAAMNIKMTLKLNDGAE 1177


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1743 bits (4514), Expect = 0.0
 Identities = 836/1170 (71%), Positives = 995/1170 (85%), Gaps = 3/1170 (0%)
 Frame = -1

Query: 3861 SPDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQ 3682
            S D++ L++L++ HI+SFD+ +D GL  M   +K + V + +T  +L+IS G  E++PPQ
Sbjct: 6    SADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQ 65

Query: 3681 KERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDG--PVVREKMNFGHLPIMLKSK 3508
            KE+G  + R+AL P ECR+AKI+Y G+   +V FQY D   PVVRE+ NFG  P+MLK++
Sbjct: 66   KEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKTR 125

Query: 3507 VCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEG 3328
             CHL+GAD QKL+  KEEA+EMGGYFILNGLER+FR +I+PK+NYPMS+VR SFR+R+EG
Sbjct: 126  RCHLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRREG 185

Query: 3327 YTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEI 3148
            YTDKAV+IRCVR DQSS+++KLYYL NGS RLGFW++G+EYLLPVG+VLKAL+DTND EI
Sbjct: 186  YTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLEI 245

Query: 3147 YVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDG 2968
            +  LTCCY EKY++ KGAVG+ LV ERVKIIL EVQ LSL T+LQCLQH+G +F+PV+DG
Sbjct: 246  FNHLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVIDG 305

Query: 2967 LETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEV 2788
            L++ES+ AV   V+RDY+FVHL  N+DKFNLLIFMLQKLF+LVD T+  DNPD+LQ QE+
Sbjct: 306  LQSESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEI 365

Query: 2787 LLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLT 2608
            LLPGHLITI+LKEKL++WL K ++L+ +EI+N G+ F+F +LA+IKK+++KNPSK I  +
Sbjct: 366  LLPGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGTS 425

Query: 2607 VENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKL 2428
            +E MLKTG L TQ+GLD+QQRAG TV AERLNFLRF+S FRAVHRGASFAGLR+TSVRKL
Sbjct: 426  IETMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRKL 485

Query: 2427 LPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGM 2248
            LPE+WGFLCPVHTPDGEPCGLLNHMTSTCRV S++DS+GNI+DF K+R SIL VL G+GM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVGM 545

Query: 2247 TPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYV 2068
             PSLPKLV++GPP VL+VLLDGRV        +EK V+++RRLK+S ++ IP+DLEVGYV
Sbjct: 546  IPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGYV 605

Query: 2067 PLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGR 1888
            PLS+GGAYPGLYLFTSP +F+RPVRNIS+PSEE  +IELIGPFEQV+MEI+C DGGDGGR
Sbjct: 606  PLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 1887 KNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQK 1708
            +N FPATHEEIHPTG+LSVVANLTP+SDHNQSPRNMYQCQMAKQTM FS QA++FRADQK
Sbjct: 666  RNAFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQK 725

Query: 1707 LYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCH 1528
            LYHLQTPQTPIVRT  YTKY++DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSV+RGMCH
Sbjct: 726  LYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCH 785

Query: 1527 GHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIY 1348
            G IYQ ET+DL D+    D   KLF R+   KS+HS IDSDGLP+VGQ++ P EPYCSIY
Sbjct: 786  GQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIY 845

Query: 1347 NTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQK 1168
            +  +++ +  + KGSE V VDYVA+D KN K   QK N+RFR +RNP+IGDKFSSRHGQK
Sbjct: 846  DKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQK 905

Query: 1167 GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATP 988
            GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKF+DATP
Sbjct: 906  GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATP 965

Query: 987  FASSIKTANGE-XXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVY 811
            FA+S+K  NG+       SLVDELG ML + GFNYHG+EVLYSGV G E+ CEIFIGPVY
Sbjct: 966  FANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVY 1025

Query: 810  YQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRL 631
            YQRLRHMVSDKFQVRSTGT+DQ+TRQP          RFGEMERD++LAHGAAYLLHDRL
Sbjct: 1026 YQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL 1085

Query: 630  HTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETV 451
            HTCSD+H+ADVCSLCGS+LT +FI PQKRA+REIGGLPP R PKKV CHAC+TSKGMETV
Sbjct: 1086 HTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETV 1145

Query: 450  AMPYVFRYLAAELAAMNIKMTLKLSNRAEA 361
            AMPYVFRYLAAELAAMNIK+TL+L + A A
Sbjct: 1146 AMPYVFRYLAAELAAMNIKITLQLGDGATA 1175


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1743 bits (4514), Expect = 0.0
 Identities = 848/1166 (72%), Positives = 986/1166 (84%), Gaps = 1/1166 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQKE 3676
            DY  L++L   HI+SFD+ VD GLETML  IKPI + + ++  KL+I FG+ EL+PPQKE
Sbjct: 24   DYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKE 83

Query: 3675 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3496
            R   +  +ALYP ECR+AKI+Y+G+F V++CFQY DG V+REK NFG  PIMLKSK+CHL
Sbjct: 84   RASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHL 143

Query: 3495 RGADP-QKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            RGAD  +KL+ +KEE SEMGGYFIL GLER+ RL+I+PKRNYP S+ R SFR+R+EGY+D
Sbjct: 144  RGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSD 203

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRCVR+DQS++S+KLYYL NGSARLGFWI+GREYLLPVG++LKAL+DT DHEIYV+
Sbjct: 204  KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVN 263

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LTCCY+E+  R KG+VGTQLVGER KIILDEVQALSL T+ QCL+H+G +F+PV+ G++ 
Sbjct: 264  LTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQN 323

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            +S+  V  AVLRDY+FVHL++NHDKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 324  DSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLP 383

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLITI+LKEKLQ+WL K +R L EE   + + FE  SL  +KK I+KN  K I LT+E+
Sbjct: 384  GHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTIES 443

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG L TQSGLD+QQRAGMTV AE+LNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 444  MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 503

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT++CR+TS++DS+GN+KDFFK+R+SIL+VL  IGMTPS
Sbjct: 504  SWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPS 563

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
             PKLV+AGPPE+L+VLLDGR+       ++EKAV+++RRLKLS ++ IP DLEVGY+PLS
Sbjct: 564  SPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLS 623

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            M GAYPGLYLFTSPSRF+RPVRNIS P+EE  D+ELIGPFEQVYMEI C DGGDGGRK +
Sbjct: 624  MNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGRKTL 683

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQM KQTM FSSQA+  RADQKLYH
Sbjct: 684  FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKLYH 743

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            LQTPQTPIVRT AY KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGMCHGHI
Sbjct: 744  LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHGHI 803

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL ++   SD A +LF RSN DKS H  IDSDGLP+VGQ + PNEPYCSIYN I
Sbjct: 804  YQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIYNEI 863

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S T    LKGSEPV+VDYVA+D KN K  LQK N+RFRRSRNPVIGDKFSSRHGQKGVC
Sbjct: 864  TSQTTCMKLKGSEPVVVDYVAVDVKN-KAHLQKANIRFRRSRNPVIGDKFSSRHGQKGVC 922

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPD+DMPFS VTGMRPDLIINPHAFPSRMTI ML ESIAAKGG+LHGKFVDATPF++
Sbjct: 923  SQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPFSN 982

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            ++K +  E      SLVD+LG ML   GFN+HG EVLYSGV G E+ C IFIGPVYYQRL
Sbjct: 983  TMKESESE----SSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYYQRL 1038

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTG +D +TRQP          RFGEMERD++LAHGA+YLLHDRLHT S
Sbjct: 1039 RHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHDRLHTSS 1098

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            DHHIADVCS CGS+LT+S IQP KRAV+ I    P R PKKV C AC++SKGMETVAMPY
Sbjct: 1099 DHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKVTCVACRSSKGMETVAMPY 1158

Query: 438  VFRYLAAELAAMNIKMTLKLSNRAEA 361
            VF+YLAAELAAMNIKMTLKLSN A A
Sbjct: 1159 VFKYLAAELAAMNIKMTLKLSNEAGA 1184


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1736 bits (4495), Expect = 0.0
 Identities = 844/1166 (72%), Positives = 982/1166 (84%), Gaps = 1/1166 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQKE 3676
            DY  L++L   HI+SFD+ VD GLETML  IKPI + + ++  KL+I FG+ EL+PPQKE
Sbjct: 19   DYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQKE 78

Query: 3675 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3496
            R   +  +ALYP ECR+AK++Y G+F V++CFQY DG V+REK NFG  PIMLKSK+CHL
Sbjct: 79   RASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLCHL 138

Query: 3495 RGADP-QKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            RGAD  +KLI +KEE SEMGGYFIL GLER+ RL+I+PKRNYP S+ R SFR+R+EGY+D
Sbjct: 139  RGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGYSD 198

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRCVR+DQS++S+KLYYL NGSARLGFWI+GREYLLPVG++LKAL+DT DHEIYV+
Sbjct: 199  KAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIYVN 258

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LTCCY+E+  R KG+VGTQLVGER KIILDEVQALSL T+ QCL+H+G +F+PV+ G++ 
Sbjct: 259  LTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGMQN 318

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            +S+  V  AVLRDY+FVHL++NHDKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 319  DSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVLLP 378

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLITI+LKEKLQ+WL K +R L EE   + + FE  SL  +KK I+KN  K I L +E+
Sbjct: 379  GHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLAIES 438

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG L TQSGLD+QQRAGMTV AE+LNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 439  MLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 498

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT++CR+TS++DS+GN+KDFFK+R+SIL+VL  IGMTP 
Sbjct: 499  SWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMTPP 558

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
             PKLV+ GPPE+L+VLLDGR+       ++EKAV+++RRLKLS ++ IP DLEVGY+PLS
Sbjct: 559  SPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIPLS 618

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            M GAYPGLYLFTSPSRF+RPVRNIS P+EE  D+EL+GPFEQVYMEI C DGGDGGRK +
Sbjct: 619  MNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGRKTL 678

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATH EIHPT ILSVV NLTPWSDHNQSPRNMYQCQM KQTM FSSQA+  RADQKLYH
Sbjct: 679  FPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKLYH 738

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            LQTPQTPIVRT AY KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGMCHGHI
Sbjct: 739  LQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHGHI 798

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL ++   SD A +LF RSN DKS H  ID+DGLP+VGQ + PNEPYCSIYN I
Sbjct: 799  YQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIYNEI 858

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S T    LKGSEPV+VDYVA+D KN K  LQK N+RFRRSRNPVIGDKFSSRHGQKGVC
Sbjct: 859  TSQTTSMKLKGSEPVVVDYVAVDVKN-KTHLQKANIRFRRSRNPVIGDKFSSRHGQKGVC 917

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPD+DMPFS VTGMRPDLIINPHAFPSRMTI ML ESIAAKGG+LHGKFVDATPF++
Sbjct: 918  SQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDATPFSN 977

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            ++K +  E      SLVD+LG ML   GFN+HG EVLYSGV G E+ C IFIGPVYYQRL
Sbjct: 978  TMKESESE----SSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYYQRL 1033

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTG +D +TRQP          RFGEMERD++LAHGAAYLLHDRLHT S
Sbjct: 1034 RHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHTSS 1093

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            DHHIADVCS CGS+LT+S IQP KRAV+ I    P R PKKV C AC++SKGMETVAMPY
Sbjct: 1094 DHHIADVCSECGSVLTSSVIQPPKRAVQVILKQLPAREPKKVTCVACRSSKGMETVAMPY 1153

Query: 438  VFRYLAAELAAMNIKMTLKLSNRAEA 361
            VF+YLAAELAAMNIKMTLKLSN A A
Sbjct: 1154 VFKYLAAELAAMNIKMTLKLSNEAGA 1179


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1729 bits (4477), Expect = 0.0
 Identities = 832/1165 (71%), Positives = 982/1165 (84%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQKE 3676
            + + L++L K HI+SFD+ +D GL+ ML ++KP+ +F+  +   L+I     E+YPPQK+
Sbjct: 17   ELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKD 76

Query: 3675 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3496
            R   +   ALYP ECR+AKI+Y G F ++VCFQ++ G VVREK+NFG  PIMLKSK C+L
Sbjct: 77   RSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSKRCYL 136

Query: 3495 RGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDK 3316
            R ADP+KL+  KEE+ EMGGYFILNGLER+ RLLI+PKRNYPMS+VR SFR+R+EGYTDK
Sbjct: 137  READPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTDK 196

Query: 3315 AVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVSL 3136
            AV+IRCVR D SS++VKLYYL NGSARLGFW++GREY+LPVG++LKALIDTND EIY  L
Sbjct: 197  AVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTKL 256

Query: 3135 TCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLETE 2956
            TCCY+EK   GKGAVGTQLVGER KIILDEVQ L+L TQ QCLQH+G +F+P+M+G+E+E
Sbjct: 257  TCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMESE 316

Query: 2955 SHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLPG 2776
            S+  V   VLR+Y+FVHL+ N+DKFNLLIFM+QKLF+L+DQT+ PDN D+LQ QEVLLPG
Sbjct: 317  SYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLPG 376

Query: 2775 HLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVENM 2596
            HLITI+LKEKL++WL K ++L+ + I NK ++F+F S+  +KK+++KN    +S  +EN+
Sbjct: 377  HLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIENL 436

Query: 2595 LKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPEA 2416
            LKTG L+TQ+GLD+QQRAG TV AERLN+ RFLS FR VHRGASFAGLR+TSVRKLLPE+
Sbjct: 437  LKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPES 496

Query: 2415 WGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPSL 2236
            WGFLCPVHTPDGEPCGLLNHMT TCR+TS+++S GNI+DFFKIR+SIL VL G+GMT S 
Sbjct: 497  WGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTSW 556

Query: 2235 PKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLSM 2056
            PK+  AGPP+VL VLLDGRV         EK V+++RRLKL+ ++ IP+DLEVGYVPLS+
Sbjct: 557  PKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLSL 616

Query: 2055 GGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNIF 1876
            GG YPGLYLFTSPSRF+RPVRNISIPS +  DIELIGPFEQV+MEI+C DGG+GGR NIF
Sbjct: 617  GGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNIF 676

Query: 1875 PATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHL 1696
            PATHEEI PT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS QAI  RADQKLYHL
Sbjct: 677  PATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYHL 736

Query: 1695 QTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHIY 1516
            QTPQTPIVRT  YTKY MDE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHG IY
Sbjct: 737  QTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQIY 796

Query: 1515 QLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTIS 1336
            Q ET+DL D++  SD   ++F R ++D+S+ S +DSDGLP VGQ+++PNEPYCS  N ++
Sbjct: 797  QTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQVT 856

Query: 1335 STTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVCS 1156
            ++ + +  KGSE VIVDYVA+D K+ KK LQK N+RFR  RNPVIGDKFSSRHGQKGVCS
Sbjct: 857  NSKRLYNHKGSETVIVDYVAVDTKS-KKHLQKANIRFRHPRNPVIGDKFSSRHGQKGVCS 915

Query: 1155 QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFASS 976
            QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKFVDATPF+ S
Sbjct: 916  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS 975

Query: 975  IKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRLR 796
            +K A G+      SLVDELG ML + GFNYHG+EVLYSGV G E+ CEIFIGPVYYQRLR
Sbjct: 976  VKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLR 1035

Query: 795  HMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCSD 616
            HMVSDK+QVR+TG +DQ+TRQP          RFGEMERDAMLAHGAAYLLHDRLHTCSD
Sbjct: 1036 HMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSD 1095

Query: 615  HHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPYV 436
            +HIADVCSLCGSILTTS +QP KR VREIGGLPP R PKKV CHAC+TSKGMETVAMPYV
Sbjct: 1096 YHIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGMETVAMPYV 1155

Query: 435  FRYLAAELAAMNIKMTLKLSNRAEA 361
            FRYLAAELAAMNI MT++L++ A A
Sbjct: 1156 FRYLAAELAAMNITMTIQLNSGAGA 1180


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1722 bits (4459), Expect = 0.0
 Identities = 857/1170 (73%), Positives = 978/1170 (83%), Gaps = 7/1170 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQKE 3676
            DY  LQ+L + HIDSFD+ ++ GLE ML  IKP       ++TK                
Sbjct: 17   DYSALQELTRHHIDSFDYMIERGLEIMLDNIKP-----ESSRTK---------------- 55

Query: 3675 RGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCHL 3496
                   + L P ECR+AKI+Y G+F  +VCF+Y+   V+REK NFG LPIMLKS++CHL
Sbjct: 56   ------HKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLPIMLKSRLCHL 109

Query: 3495 RGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDK 3316
             G D Q+L+   EE++EMGGYFILNGLER+ RLLI+PKRNYPMS VR SFR+R+EGYTDK
Sbjct: 110  YGVDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTDK 169

Query: 3315 AVLIRCVRD------DQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDH 3154
            AV+IRCVR+      DQSS+SVKLYYL++GSARLGFWI+GREYLLP G+VLKAL +T D 
Sbjct: 170  AVVIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDR 229

Query: 3153 EIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVM 2974
            EIY  LTCCY EKY++ KGAVG+QLVGER KIILDEV+ LSL TQ +CL+H+G +F+PVM
Sbjct: 230  EIYEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVM 289

Query: 2973 DGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQ 2794
            DGLE E+   V  AVL+DY+FVHL +  DKFNLLIFMLQKLF+LVDQT+  DNPD+LQ Q
Sbjct: 290  DGLEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQNQ 349

Query: 2793 EVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNIS 2614
            EVLLPGHL+TI+LKEKL+EWL KA+++L EEI  K  +F FLS+  +KK+IDKNPS  IS
Sbjct: 350  EVLLPGHLVTIYLKEKLEEWLRKAKKVLQEEIA-KNNNFNFLSVLDVKKVIDKNPSTTIS 408

Query: 2613 LTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVR 2434
            L VENMLKTG LVTQ+GLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR+TSVR
Sbjct: 409  LAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVR 468

Query: 2433 KLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGI 2254
            KLLPE+WGFLCPVHTPDGEPCGLLNHMT +CR+TS+FDSQG +KDFF IR SIL VLT +
Sbjct: 469  KLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSL 528

Query: 2253 GMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVG 2074
            GMT SLPKLV+AGPP+VL+VLLDGRV        VEK V ++RRLK++ S+ IP+DLEVG
Sbjct: 529  GMTSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVG 588

Query: 2073 YVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDG 1894
            YVPLSMGGA+PGLYLFTSPSRFIRPV+NISIP+ E  +IELIGPFEQV+MEI+C DGG+G
Sbjct: 589  YVPLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNG 648

Query: 1893 GRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRAD 1714
            GR + FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFS Q+++FRAD
Sbjct: 649  GRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRAD 708

Query: 1713 QKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 1534
            QKLYHLQTPQTPIVRT++YTKY +DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM
Sbjct: 709  QKLYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGM 768

Query: 1533 CHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCS 1354
            CHG IYQ ET+DL +E   SD A ++F RSN DKS+HS IDSDGLP+VGQ++ PNEPYCS
Sbjct: 769  CHGQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCS 828

Query: 1353 IYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHG 1174
            IYN I++TT+    KGS+PVIVDYVAID KN KK LQKVN+RFR  RNP+IGDKFSSRHG
Sbjct: 829  IYNEITNTTRTNNRKGSDPVIVDYVAIDTKN-KKHLQKVNIRFRHPRNPIIGDKFSSRHG 887

Query: 1173 QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDA 994
            QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL+GKFVDA
Sbjct: 888  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDA 947

Query: 993  TPFASSIKTAN-GEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGP 817
            TPF SS+K  N GE      SLVD+LG ML SHGFNYHG+EVLYSGV G E+ CEIFIGP
Sbjct: 948  TPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGP 1007

Query: 816  VYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHD 637
            VYYQRLRHMVSDKFQVRSTGT+DQ+TRQP          RFGEMERDAMLAHGAAYLLHD
Sbjct: 1008 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHD 1067

Query: 636  RLHTCSDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGME 457
            RLHTCSD+HIADVCSLCGSILTTSFIQ QKR VR+IGGLPP   PKKV CH+C+TSKGME
Sbjct: 1068 RLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIGGLPPVGAPKKVACHSCQTSKGME 1127

Query: 456  TVAMPYVFRYLAAELAAMNIKMTLKLSNRA 367
            TVAMPYVFRYLAAELAAMNIKM ++LS  A
Sbjct: 1128 TVAMPYVFRYLAAELAAMNIKMNVQLSGGA 1157


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score = 1670 bits (4326), Expect = 0.0
 Identities = 825/1164 (70%), Positives = 963/1164 (82%)
 Frame = -1

Query: 3858 PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQK 3679
            PD++ L++L K HI+SFD+ VDAGL+TML  IKP+ VF+ +T TKL+I      LYPPQK
Sbjct: 9    PDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQK 68

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
            ER   + REAL P ECR+AKI+Y+G+ +++VCFQYNDGP++RE +NFG  PIML+SK+C+
Sbjct: 69   ERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCN 128

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRGADPQKL+ +KEEASEMGGYFILNGLER+ RLLI+PKRNYPMS+VR SF +R+EGYTD
Sbjct: 129  LRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTD 188

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRCVR DQSS+SV+LYYL+NGSARLGFW+RGREYLLPVG++LKALIDT D EIYV+
Sbjct: 189  KAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVN 248

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LT CY+EKY++GKGAVGTQLVGER KIILDE++ LSL T+LQCL+++G +F+PVM+ L+ 
Sbjct: 249  LTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKN 308

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            +S+  V  AVL+D + VHL++N DKFNLLIFMLQKLF+L+DQT+ PDNPD+LQ  EVLLP
Sbjct: 309  DSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLP 368

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLIT++LKEKL++WL K RRLLL+EI  K + F+F  +  +KK++DKN  K +S  VEN
Sbjct: 369  GHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVEN 428

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG LVTQ+GLD+QQRAG TV AERLNFLRFLSHFRAVHRGASFAGLR+T+VRKLLPE
Sbjct: 429  MLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPE 488

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT T R+TS FDSQGNIKD+FKI++SIL+VL  +GMTPS
Sbjct: 489  SWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPS 548

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LPK+   GPPE L VLLDG V        VEK V++IR LK+S  A IP+D+EVGYVPLS
Sbjct: 549  LPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLS 608

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYL TSPSRF+RPVRNISI S+   +IELIGPFEQV+MEI+C DGGDGGRK+ 
Sbjct: 609  MGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSS 668

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPT +LSVVANLTPWSDHNQSPRNMYQ   A   + F++ +   R       
Sbjct: 669  FPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQYGKANNGIFFTNYSTSCR------- 721

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
                  P V ++           +GTNAIVAVLAYTGYDMEDAMILNKSSVERGM HG I
Sbjct: 722  ------PKVISS-----------SGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 764

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ ET+DL ++ G SD + ++F +SN +KS   SIDSDGLP VGQ+++P+EPYCSIYN +
Sbjct: 765  YQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEV 824

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
            +S+      KGSE V VDYVA D KN KK LQKVN+RFR  RNPVIGDKFSSRHGQKGVC
Sbjct: 825  TSSIHTLKRKGSEAVYVDYVAADVKN-KKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVC 883

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPD+DMPFSG TGMRPDLIINPHAFPSRMTI ML ES+AAKGGSL G+FVDATPF S
Sbjct: 884  SQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRS 943

Query: 978  SIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRL 799
            S+   +GE      SLVD+LG +L   GFNYHGLEVLYSGV G E+ CEIFIGPVYYQRL
Sbjct: 944  SVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRL 1003

Query: 798  RHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCS 619
            RHMVSDKFQVRSTGT+DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTCS
Sbjct: 1004 RHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1063

Query: 618  DHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMPY 439
            D+HIADVCSLCGS+L T+FIQPQKR VREIGGLPPGR PKKV CHAC+TSKGMETVAMPY
Sbjct: 1064 DYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPY 1123

Query: 438  VFRYLAAELAAMNIKMTLKLSNRA 367
            VFRYLAAELAAMNIKMTLKLS+ A
Sbjct: 1124 VFRYLAAELAAMNIKMTLKLSDGA 1147


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score = 1654 bits (4284), Expect = 0.0
 Identities = 797/1080 (73%), Positives = 933/1080 (86%), Gaps = 3/1080 (0%)
 Frame = -1

Query: 3591 EVCFQYNDG--PVVREKMNFGHLPIMLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNG 3418
            +V FQY D   PVVRE+ NFG  P+MLK++ CHL+GAD QKL+  KEEA+EMGGYFILNG
Sbjct: 3    DVEFQYLDAGSPVVRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNG 62

Query: 3417 LERLFRLLIIPKRNYPMSVVRVSFRERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSA 3238
            LER+FR +I+PK+NYPMS+VR SFR+R+EGYTDKAV+IRCVR DQSS+++KLYYL NGS 
Sbjct: 63   LERVFRSVILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSV 122

Query: 3237 RLGFWIRGREYLLPVGVVLKALIDTNDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKI 3058
            RLGFW++G+EYLLPVG+VLKAL+DTND EI+  LTCCY EKY++ KGAVG+ LV ERVKI
Sbjct: 123  RLGFWLQGKEYLLPVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKI 182

Query: 3057 ILDEVQALSLCTQLQCLQHLGAYFKPVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFN 2878
            IL EVQ LSL T+LQCLQH+G +F+PV+DGL++ES+ AV   V+RDY+FVHL  N+DKFN
Sbjct: 183  ILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFN 242

Query: 2877 LLIFMLQKLFALVDQTATPDNPDALQTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEI 2698
            LLIFMLQKLF+LVD T+  DNPD+LQ QE+LLPGHLITI+LKEKL++WL K ++L+ +EI
Sbjct: 243  LLIFMLQKLFSLVDHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEI 302

Query: 2697 KNKGESFEFLSLAHIKKIIDKNPSKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAER 2518
            +N G+ F+F +LA+IKK+++KNPSK I  ++E MLKTG L TQ+GLD+QQRAG TV AER
Sbjct: 303  ENNGKKFDFFNLANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAER 362

Query: 2517 LNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCR 2338
            LNFLRF+S FRAVHRGASFAGLR+TSVRKLLPE+WGFLCPVHTPDGEPCGLLNHMTSTCR
Sbjct: 363  LNFLRFISFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCR 422

Query: 2337 VTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXX 2158
            V S++DS+GNI+DF K+R SIL VL G+GM PSLPKLV++GPP VL+VLLDGRV      
Sbjct: 423  VASYYDSRGNIRDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPS 482

Query: 2157 XIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIP 1978
              +EK V+++RRLK+S ++ IP+DLEVGYVPLS+GGAYPGLYLFTSP +F+RPVRNIS+P
Sbjct: 483  SEIEKVVAHLRRLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLP 542

Query: 1977 SEEDLDIELIGPFEQVYMEIKCADGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHN 1798
            SEE  +IELIGPFEQV+MEI+C DGGDGGR+N FPATHEEIHPTG+LSVVANLTP+SDHN
Sbjct: 543  SEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHN 602

Query: 1797 QSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTN 1618
            QSPRNMYQCQMAKQTM FS QA++FRADQKLYHLQTPQTPIVRT  YTKY++DE+PTGTN
Sbjct: 603  QSPRNMYQCQMAKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTN 662

Query: 1617 AIVAVLAYTGYDMEDAMILNKSSVERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNT 1438
            AIVAVLAYTGYDMEDAMILNKSSV+RGMCHG IYQ ET+DL D+    D   KLF R+  
Sbjct: 663  AIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKD 722

Query: 1437 DKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNH 1258
             KS+HS IDSDGLP+VGQ++ P EPYCSIY+  +++ +  + KGSE V VDYVA+D KN 
Sbjct: 723  AKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNS 782

Query: 1257 KKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA 1078
            K   QK N+RFR +RNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA
Sbjct: 783  KNLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHA 842

Query: 1077 FPSRMTIGMLFESIAAKGGSLHGKFVDATPFASSIKTANGE-XXXXXXSLVDELGPMLTS 901
            FPSRMTI ML ES+AAKGGSLHGKF+DATPFA+S+K  NG+       SLVDELG ML +
Sbjct: 843  FPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRT 902

Query: 900  HGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXX 721
             GFNYHG+EVLYSGV G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP   
Sbjct: 903  CGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKG 962

Query: 720  XXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSFIQPQKRA 541
                   RFGEMERD++LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+LT +FI PQKRA
Sbjct: 963  RKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRA 1022

Query: 540  VREIGGLPPGRIPKKVICHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSNRAEA 361
            +REIGGLPP R PKKV CHAC+TSKGMETVAMPYVFRYLAAELAAMNIK+TL+L + A A
Sbjct: 1023 IREIGGLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGATA 1082


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1646 bits (4262), Expect = 0.0
 Identities = 819/1167 (70%), Positives = 957/1167 (82%), Gaps = 2/1167 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYP-PQK 3679
            D   L++L + HIDSFD+ + AGL  ML  IKP+ V  P T   L+I F +  +   P K
Sbjct: 12   DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
            +R      E LYP ECR+ +I+Y G+   ++ FQ  D   VRE+ NFG  PIML SK C+
Sbjct: 72   DRS----SEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSKCCN 127

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRG DPQ+L+  KEEASEMGGYFILNGLER+ R +I+PKRNYPMS VR SFR+R+EGYTD
Sbjct: 128  LRGHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTD 187

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRC RDDQSS++VKLYYLQNGSARLG WI+G+E+LLPVG++LKAL+DT D+E+Y S
Sbjct: 188  KAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTPDNELYAS 247

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LTCCY  K+++GKGAVGTQLVGER +II++EV  L L T+ QCL+++G +F+P+M GLE 
Sbjct: 248  LTCCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQPLMSGLEN 307

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            ES+  VG AVL+DY+FVHL+ N DKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 308  ESYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLP 367

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLITI+LKEKL++WL + ++LL +EIK +  +  F S+  +KK++DKNP++ ISL VEN
Sbjct: 368  GHLITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQISLAVEN 427

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG + TQ+GLD+QQRAG +V AERLNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 428  MLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 487

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TS+FD+QGNI+DF KIR+SIL+VL  +GM PS
Sbjct: 488  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLIEVGMIPS 547

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LP LV  G P  L+VLLDGRV        VEK V+++R+LK+S ++ IP+DLEVGYVPLS
Sbjct: 548  LPMLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLS 607

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYLFTSPSRF+RPV+NISI + E  +IELIGPFEQV+MEIKC DG DGGRK+ 
Sbjct: 608  MGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGRDGGRKDA 667

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPTG+LSVVANLTPWS+HNQSPRNMYQCQMAKQTM FS QA++ RADQKLYH
Sbjct: 668  FPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYH 727

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            L+TPQ+PIVRT  YT Y +DE+PTGTNAIVAVL+YTGYDMEDAMIL+KSSV+RGM HG +
Sbjct: 728  LKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLV 787

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ E+VDL D++G S  + + F RS  DKS HS IDSDGLP+VGQ + P+EPY SIY+ +
Sbjct: 788  YQTESVDLSDQKGRSG-SQRSFRRSAADKSHHSLIDSDGLPYVGQTINPDEPYYSIYDEV 846

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
                +    KGSEP IVDYVAIDGK H   LQKVN+RFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 847  KGAIRTTKRKGSEPAIVDYVAIDGKKH---LQKVNIRFRHPRNPIIGDKFSSRHGQKGVC 903

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGKFVDATPFA+
Sbjct: 904  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFAN 963

Query: 978  SIKTANGE-XXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQR 802
            S K  N E       +LVDELG ML   GFNY+G EVLYSGV G E+ CEIFIGPVYYQR
Sbjct: 964  SEKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQR 1023

Query: 801  LRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTC 622
            LRHMVSDKFQVRSTG +DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTC
Sbjct: 1024 LRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1083

Query: 621  SDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMP 442
            SD+HIADVCSLCGSILTTS +QPQ   VREI G+PP R PKKV CHACKTSKGMETVAMP
Sbjct: 1084 SDYHIADVCSLCGSILTTSSVQPQV-PVREIPGMPPMRAPKKVTCHACKTSKGMETVAMP 1142

Query: 441  YVFRYLAAELAAMNIKMTLKLSNRAEA 361
            YVFRYLAAELAAMNIK+ L+LSN   A
Sbjct: 1143 YVFRYLAAELAAMNIKLNLQLSNATGA 1169


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1637 bits (4240), Expect = 0.0
 Identities = 813/1167 (69%), Positives = 958/1167 (82%), Gaps = 2/1167 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYP-PQK 3679
            D   L++L + HI+SFD+ V AGL  ML  IKP+ V  P T   L+I F +  +   P K
Sbjct: 14   DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 73

Query: 3678 ERGVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPIMLKSKVCH 3499
            +R      E LYP ECR+ +I+Y G+   ++ FQ  D   VRE+ NFG  PIML SK C+
Sbjct: 74   DRST----EPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSKCCN 129

Query: 3498 LRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYTD 3319
            LRG DPQ+L++ KEE+SEMGGYFILNGLER+ R +I+PKRNYPMS VR SFR+R+EGYTD
Sbjct: 130  LRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTD 189

Query: 3318 KAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYVS 3139
            KAV+IRC RDDQSS++VKLYYLQNGSARLG WI+G+E+LLPVG++LKALIDT D+E+Y S
Sbjct: 190  KAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALIDTPDNELYAS 249

Query: 3138 LTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLET 2959
            LTCCY EK+++GKGAVGTQLVGER +II++EV  L L T+ QCL+H+G +F+P+M GLE 
Sbjct: 250  LTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHFQPLMGGLEN 309

Query: 2958 ESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLLP 2779
            E +  VG AVL+DY+FVHL+ N DKFNLLIFMLQKLF+L+DQT+  DNPD+LQ QEVLLP
Sbjct: 310  EPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLP 369

Query: 2778 GHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVEN 2599
            GHLITI+LKEKL++WL + ++LL +EIK +  +  F S+  +KK++DKNP++ ISL VEN
Sbjct: 370  GHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPTRQISLAVEN 429

Query: 2598 MLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLPE 2419
            MLKTG + TQ+GLD+QQRAG +V AERLNFLRFLSHFRAVHRGASFAGLR+TSVRKLLPE
Sbjct: 430  MLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 489

Query: 2418 AWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTPS 2239
            +WGFLCPVHTPDGEPCGLLNHMT TCR+TS+FD+QGNI+DF K+++SIL+VL  +GM PS
Sbjct: 490  SWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNVLIEVGMIPS 549

Query: 2238 LPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPLS 2059
            LP LV AG P  L+VLLDGRV        VEK V+++R+LK+S ++ IP+DLEVGYVPLS
Sbjct: 550  LPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLS 609

Query: 2058 MGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKNI 1879
            MGGAYPGLYLFTSPSRF+RPV+NISI + E  +IELIGPFEQV+MEI+C DG DGGRK+ 
Sbjct: 610  MGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPDGRDGGRKDA 669

Query: 1878 FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLYH 1699
            FPATHEEIHPTG+LSVVANLTPWS+HNQSPRNMYQCQMAKQTM FS QA++ RADQKLYH
Sbjct: 670  FPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYH 729

Query: 1698 LQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGHI 1519
            L+TPQ+PIVRT  YT Y +DE+PTGTNAIVAVL+YTGYDMEDAMIL+KSSV+RGM HG +
Sbjct: 730  LKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLV 789

Query: 1518 YQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNTI 1339
            YQ E++DL D++G S  + + F RS  DKS HS IDSDGLP+VGQ ++P+EPY S Y+ +
Sbjct: 790  YQTESIDLSDQKGRSG-SQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPDEPYYSTYDEV 848

Query: 1338 SSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGVC 1159
                +    KGSEP IVDYVAIDG   KK LQKVN+RFR  RNP+IGDKFSSRHGQKGVC
Sbjct: 849  KGAIRTTKRKGSEPAIVDYVAIDG---KKQLQKVNIRFRHPRNPIIGDKFSSRHGQKGVC 905

Query: 1158 SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFAS 979
            SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTI ML ES+AAKGGSLHGK+VDATPFA+
Sbjct: 906  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFAN 965

Query: 978  SIKTANGE-XXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQR 802
            S K    E       +LVDELG ML   GFNY+G EVLYSGV G E+ CEIFIGPVYYQR
Sbjct: 966  SEKKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYYQR 1025

Query: 801  LRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTC 622
            LRHMVSDKFQVRSTG +DQVTRQP          RFGEMERD++LAHGAAYLLHDRLHTC
Sbjct: 1026 LRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1085

Query: 621  SDHHIADVCSLCGSILTTSFIQPQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAMP 442
            SD+HIADVCSLCGSILTTS +QP  R V EI G+PP R PKKV CHACKTSKGMETVAMP
Sbjct: 1086 SDYHIADVCSLCGSILTTSSVQPPVR-VCEIPGMPPMRAPKKVTCHACKTSKGMETVAMP 1144

Query: 441  YVFRYLAAELAAMNIKMTLKLSNRAEA 361
            YVFRYLAAELAAMNIK+ L+LSN + A
Sbjct: 1145 YVFRYLAAELAAMNIKLNLQLSNASGA 1171


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score = 1633 bits (4228), Expect = 0.0
 Identities = 795/1165 (68%), Positives = 957/1165 (82%), Gaps = 3/1165 (0%)
 Frame = -1

Query: 3855 DYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEHELYPPQKE 3676
            D+  L +L+  HI+SFD+  + GL  M S+IKP+ V+EP T+ KL I   +  +Y PQKE
Sbjct: 16   DFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSPQKE 75

Query: 3675 R-GVNSFREALYPHECREAKINYAGRFSVEVCFQYN-DGPVVREKMNFGHLPIMLKSKVC 3502
                 S +EAL+P ECR+AKI+Y G    E+CF+Y+ D  VVR++  FG  PIML SK+C
Sbjct: 76   SLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMSKLC 135

Query: 3501 HLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFRERQEGYT 3322
            HLRGAD ++L+ +KE  SEMGGYFILNG+ER+FR +I PKRN+P  +VR SF  R+EGY+
Sbjct: 136  HLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPTGMVRNSFCGRREGYS 195

Query: 3321 DKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDTNDHEIYV 3142
            DKAV IRCVRDDQSS++VKLYYL+NGSAR+GFWI  REYLLPVGVVLKAL +TND EIY 
Sbjct: 196  DKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGVVLKALTETNDEEIYE 255

Query: 3141 SLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFKPVMDGLE 2962
            +LTCCY+E+Y RG GA+GTQL+ ER KIILDEV+ L L T+ QC ++LG  F+P +DGLE
Sbjct: 256  NLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGLE 315

Query: 2961 TESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDALQTQEVLL 2782
             ES+  V  AVL++Y+FVHL+++ DKFNLLIF++QKLF+LVDQT+ PDNPD+LQ QE+L+
Sbjct: 316  KESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEILV 375

Query: 2781 PGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSKNISLTVE 2602
            PGHLITI+LKEKL+EWL K + L+ +E  N+ + F F ++A +KKII+KNP ++I +++E
Sbjct: 376  PGHLITIYLKEKLEEWLRKCKSLIEDEF-NRSKKFSFETIADVKKIINKNPPRSIGMSIE 434

Query: 2601 NMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRSTSVRKLLP 2422
             +LK+G L TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR+T+VRKLLP
Sbjct: 435  TLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLP 494

Query: 2421 EAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVLTGIGMTP 2242
            E+WGFLCPVHTPDGEPCGLLNHMT TCR+TS FDS GNI+DF KIR S++ VL G+GM P
Sbjct: 495  ESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIRKSVVDVLVGVGMVP 554

Query: 2241 SLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDLEVGYVPL 2062
            SLPKLVRAGPP+V+ VLLDG+V       +V + V+Y+RRLK+   + IP DLEVGYVP 
Sbjct: 555  SLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAPSVIPEDLEVGYVPT 614

Query: 2061 SMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADGGDGGRKN 1882
            SMGG+YPGLYL + PSRFIRPV+N S+PS+   +IEL+GPFEQV+MEI C DGG+GGR N
Sbjct: 615  SMGGSYPGLYLASCPSRFIRPVKNNSVPSD---NIELVGPFEQVFMEISCPDGGNGGRNN 671

Query: 1881 IFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQFRADQKLY 1702
               ATHEEIHPTGI+SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S+QA+QFRADQK+Y
Sbjct: 672  SSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIY 731

Query: 1701 HLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGH 1522
            HLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMILNKSSVERGMCHG 
Sbjct: 732  HLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHGQ 791

Query: 1521 IYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEPYCSIYNT 1342
            IYQ ETVDL D+R  SD+  + F RS  DKS HS ID+DGLP++GQ + PNEPYCSIY+ 
Sbjct: 792  IYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDADGLPYIGQKIYPNEPYCSIYDG 851

Query: 1341 ISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSSRHGQKGV 1162
            ++++ K    KG++PVIVD+V++D K+ K P QK N+RFR +RNP+IGDKFSSRHGQKGV
Sbjct: 852  VTNSIKTMKRKGTDPVIVDFVSVDMKSKKHP-QKANIRFRHARNPIIGDKFSSRHGQKGV 910

Query: 1161 CSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKFVDATPFA 982
            CSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKGGSL G+FVDATPF 
Sbjct: 911  CSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLRGEFVDATPFR 970

Query: 981  SSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFIGPVYYQR 802
             ++K  NGE       LVD+LG ML   GFNY+G E LYSG LG+E+ CEIF+GPVYYQR
Sbjct: 971  DAVKKPNGEEESKSSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCEIFMGPVYYQR 1030

Query: 801  LRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLLHDRLHTC 622
            LRHMVSDKFQVRSTG +DQ+TRQP          RFGEMERDAMLAHGA+YLLHDRLHT 
Sbjct: 1031 LRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGASYLLHDRLHTS 1090

Query: 621  SDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVICHACKTSKGMETVAM 445
            SDHHIADVCSLCGS+LT+S +   QK+ +++IG LPPGR PKKV C +CKTSKGMETVAM
Sbjct: 1091 SDHHIADVCSLCGSLLTSSVVNVQQKKLIQDIGKLPPGRTPKKVTCDSCKTSKGMETVAM 1150

Query: 444  PYVFRYLAAELAAMNIKMTLKLSNR 370
            PYVFRYLAAELAAMNIK+TL+LS R
Sbjct: 1151 PYVFRYLAAELAAMNIKVTLQLSGR 1175


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1627 bits (4212), Expect = 0.0
 Identities = 798/1182 (67%), Positives = 958/1182 (81%), Gaps = 10/1182 (0%)
 Frame = -1

Query: 3876 NSNLPS-PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQ------ 3718
            +S +P+  D K L +L+  HI+SFD+    GL+ M ++IKP+ V++P T+ +L       
Sbjct: 7    DSTVPTMEDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFM 66

Query: 3717 -ISFGEHELYPPQKERGVNSFR-EALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKM 3544
             +      ++ PQKE   ++ R E L P ECR+AKI+Y G F  +VCF+YNDG VVR++ 
Sbjct: 67   ILWLENPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRF 126

Query: 3543 NFGHLPIMLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMS 3364
            +FG  PIML SK+C LRGAD +KL+  KE  SEMGGYFILNG+ER+FR +I PKRN+P S
Sbjct: 127  DFGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTS 186

Query: 3363 VVRVSFRERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVV 3184
            ++R SFR+R+EGYT+KAV+ RCVRDDQSS++VKLYYL+NGSAR+GFWI GREYLLPVG+V
Sbjct: 187  MIRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 246

Query: 3183 LKALIDTNDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQ 3004
            LKAL +T D EIY SL CCYSE Y RG GA+GTQL+ ER KIILDEV+ L L T+ QC +
Sbjct: 247  LKALTNTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRK 306

Query: 3003 HLGAYFKPVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTAT 2824
            HLG +F+PV+DGLE ESH  V  AVLRDY+FVHL+++HDKFNLLIF++QKL++LVDQT+ 
Sbjct: 307  HLGQHFQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSL 366

Query: 2823 PDNPDALQTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKI 2644
            PDNPD+LQ QE+L+PGH+ITI+LKEKL++WL K + LL +E+ N    F F SLA +KK+
Sbjct: 367  PDNPDSLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKL 426

Query: 2643 IDKNPSKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGAS 2464
            I+KNP ++I  ++E +LKTG L TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGAS
Sbjct: 427  INKNPPRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGAS 486

Query: 2463 FAGLRSTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIR 2284
            FAGLR+T+VRKLLPE+WGFLCPVHTPDG PCGLLNHMT T R+TS FDS+GNI+DF KIR
Sbjct: 487  FAGLRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIR 546

Query: 2283 LSILSVLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSES 2104
             S++ VLTG GM  SLPKLVRAGPP+V+ VLLDG+V       +V K VSY+RRLK+   
Sbjct: 547  KSVVEVLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAP 606

Query: 2103 AGIPNDLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYM 1924
            + IP DLEVGYVP+SMGG+YPGLYL + P+RFIRPV+NISIPSE   +IELIGPFEQV+M
Sbjct: 607  SVIPEDLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSE---NIELIGPFEQVFM 663

Query: 1923 EIKCADGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAF 1744
            EI C DGG+GGR N  PATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+
Sbjct: 664  EISCPDGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAY 723

Query: 1743 SSQAIQFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMI 1564
            S+QA+QFRADQK+YHLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMI
Sbjct: 724  STQALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMI 783

Query: 1563 LNKSSVERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQ 1384
            LNKSSVERGMCHG IYQ E +DL D+    D   K F RS TDKS HS ID+DGLP+VGQ
Sbjct: 784  LNKSSVERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQ 843

Query: 1383 IVQPNEPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPV 1204
             + P+EPYC IY+ ++   +    KG++PVIVD+V++D K+ K P QK N+RFR +RNP+
Sbjct: 844  KIYPDEPYCRIYDEVTGKQRLMKGKGTDPVIVDFVSVDMKSKKHP-QKANIRFRHARNPI 902

Query: 1203 IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKG 1024
            IGDKFSSRHGQKGVCSQLWPDI+MPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKG
Sbjct: 903  IGDKFSSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG 962

Query: 1023 GSLHGKFVDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIE 844
            GSLHGKFVDATPF  ++K  NGE       LVD+LG ML   GFNY+G E LYSG LG+E
Sbjct: 963  GSLHGKFVDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVE 1022

Query: 843  MPCEIFIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLA 664
            + CEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ+T QP          RFGEMERD++LA
Sbjct: 1023 LKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLA 1082

Query: 663  HGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVIC 487
            HGA+YLLHDRLHT SDHHIADVCSLCGS+LT+S +   QK+ ++  G LPPGR PKKV C
Sbjct: 1083 HGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTC 1142

Query: 486  HACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSNRAEA 361
            H+C TSKGMETVAMPYVFRYLAAELA+MNIKMTL+LS+R  A
Sbjct: 1143 HSCGTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSDRGVA 1184


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 795/1172 (67%), Positives = 959/1172 (81%), Gaps = 3/1172 (0%)
 Frame = -1

Query: 3876 NSNLPS-PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEH 3700
            +S +P+  D+K L +L+  HI+SFD+    GL+ M ++IKP+ V++P T+ +L I     
Sbjct: 7    DSTVPTMEDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENP 66

Query: 3699 ELYPPQKERGVNSFR-EALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPI 3523
             ++ PQKE   ++ R E L P ECR+AKI+Y G F  +VCF+YNDG VVR+K +FG  PI
Sbjct: 67   LVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPI 126

Query: 3522 MLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFR 3343
            ML SK+C L+GAD +KL+  KE  SEMGGYFILNG+ER+FR +I PKRN+P S++R SFR
Sbjct: 127  MLMSKLCSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFR 186

Query: 3342 ERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDT 3163
            +R+EGY+ KAV+ RCVRDDQSS++VKLYYL+NGSAR+GFWI GREYLLPVG+VLKAL ++
Sbjct: 187  DRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNS 246

Query: 3162 NDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFK 2983
             D EIY SL CCYSE Y RG GA+GTQLV ER KIILDEV+ L L T+ QC +HLG +F+
Sbjct: 247  CDEEIYESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQ 306

Query: 2982 PVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDAL 2803
            PV+DG++ ES   V  AVLRDY+FVHL+++HDKFNLLIF++QKL++LVDQT+ PDNPD+L
Sbjct: 307  PVLDGVKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSL 366

Query: 2802 QTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKGESFEFLSLAHIKKIIDKNPSK 2623
            Q QE+L+PGH+ITI+LKEKL+EWL K + LL +E+ N    F F SLA +KK+I+KNP +
Sbjct: 367  QNQEILVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPR 426

Query: 2622 NISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLRST 2443
            +I  ++E +LKTG L TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR+T
Sbjct: 427  SIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTT 486

Query: 2442 SVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILSVL 2263
            +VRKLLPE+WGFLCPVHTPDG PCGLLNHMT T R+TS FDS+GNI+DF KIR S++ VL
Sbjct: 487  TVRKLLPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVL 546

Query: 2262 TGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPNDL 2083
            TG GM PSLPKLVRAGPP+V+ VLLDG+V       +V K VSYIRRLK+   + IP DL
Sbjct: 547  TGAGMVPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDL 606

Query: 2082 EVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCADG 1903
            EVGYVP SMGG+YPGLYL + P+RFIRPV+NISIPS+   +IELIGPFEQV+MEI C DG
Sbjct: 607  EVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVFMEISCPDG 663

Query: 1902 GDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIQF 1723
            G+GGR N   ATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S+QA+QF
Sbjct: 664  GNGGRNNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQF 723

Query: 1722 RADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVE 1543
            RADQK+YHLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMILNKSSVE
Sbjct: 724  RADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVE 783

Query: 1542 RGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPNEP 1363
            RGMCHG IYQ E +DL D+    D   K F RS T+K+ H  ID+DGLP VGQ + P+EP
Sbjct: 784  RGMCHGQIYQTENIDLSDQNSRFDSGSKSFRRS-TNKAEHFRIDADGLPSVGQKLYPDEP 842

Query: 1362 YCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKFSS 1183
            YCSIY+ +++ T+    KG++PVIVD+V++D K+ K P Q+ N+RFR +RNP+IGDKFSS
Sbjct: 843  YCSIYDEVTNKTRHMKRKGTDPVIVDFVSVDMKSKKHP-QRANIRFRHARNPIIGDKFSS 901

Query: 1182 RHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHGKF 1003
            RHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKGGSLHGKF
Sbjct: 902  RHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKF 961

Query: 1002 VDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEIFI 823
            VDATPF  ++K  NGE       LVD+LG ML   GFN++G E LYSG LG+E+ CEIF+
Sbjct: 962  VDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVELKCEIFM 1021

Query: 822  GPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAYLL 643
            GPVYYQRLRHMVSDKFQVRSTG +DQ+T QP          RFGEMERD++LAHGA+YLL
Sbjct: 1022 GPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLL 1081

Query: 642  HDRLHTCSDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVICHACKTSK 466
            HDRLHT SDHHIADVCSLCGS+LT+S +   QK+ ++EIG LPPGR PKKV C++CKTSK
Sbjct: 1082 HDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIGKLPPGRTPKKVTCYSCKTSK 1141

Query: 465  GMETVAMPYVFRYLAAELAAMNIKMTLKLSNR 370
            GMETVAMPYVFRYLAAELA+MNIKMTL+LS+R
Sbjct: 1142 GMETVAMPYVFRYLAAELASMNIKMTLQLSDR 1173


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1617 bits (4188), Expect = 0.0
 Identities = 790/1174 (67%), Positives = 950/1174 (80%), Gaps = 5/1174 (0%)
 Frame = -1

Query: 3876 NSNLPS-PDYKTLQDLIKPHIDSFDHFVDAGLETMLSQIKPIVVFEPYTKTKLQISFGEH 3700
            +S +P+  D+K L +L+  HI+SFD+  D GLE M ++IKP+                  
Sbjct: 7    DSTVPNIEDFKELHNLVTHHIESFDYMTDKGLEVMFNRIKPVT---------------NP 51

Query: 3699 ELYPPQKER-GVNSFREALYPHECREAKINYAGRFSVEVCFQYNDGPVVREKMNFGHLPI 3523
             ++ PQKE     S +E L+P ECR+AKI+Y G F  +VCF+YN+G VVR+K +FG  PI
Sbjct: 52   VVFAPQKESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFDFGQFPI 111

Query: 3522 MLKSKVCHLRGADPQKLIFHKEEASEMGGYFILNGLERLFRLLIIPKRNYPMSVVRVSFR 3343
            ML SK+C LRGAD +KL+  KE  SEMGGYF+LNG+ER+FR +I PKRN+P S++R SFR
Sbjct: 112  MLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIRNSFR 171

Query: 3342 ERQEGYTDKAVLIRCVRDDQSSISVKLYYLQNGSARLGFWIRGREYLLPVGVVLKALIDT 3163
            +R+EGY+DKAV IRCVRDDQSS++VKLYYL+NGSAR+GFWI GREYLLPVG+VLKAL  T
Sbjct: 172  DRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKALTKT 231

Query: 3162 NDHEIYVSLTCCYSEKYQRGKGAVGTQLVGERVKIILDEVQALSLCTQLQCLQHLGAYFK 2983
            ND E+Y SL CCY+E Y RG GA+GTQLV ER K+ILDEV+ + L T+ QC +HLG +F+
Sbjct: 232  NDEEVYKSLNCCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKHLGEHFQ 291

Query: 2982 PVMDGLETESHLAVGRAVLRDYVFVHLESNHDKFNLLIFMLQKLFALVDQTATPDNPDAL 2803
            PV+DGLE ES+  V  AVLRDY+FVHL+++HDKFNLLIF++QKL++LVDQT+ PDNPD+L
Sbjct: 292  PVLDGLEKESYPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLPDNPDSL 351

Query: 2802 QTQEVLLPGHLITIFLKEKLQEWLYKARRLLLEEIKNKG--ESFEFLSLAHIKKIIDKNP 2629
            Q QE+L+PGHLIT++LKEKL+EWL K + LL +E+ N      F F SLA +KK+ +KNP
Sbjct: 352  QNQEILVPGHLITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKKLFNKNP 411

Query: 2628 SKNISLTVENMLKTGNLVTQSGLDIQQRAGMTVHAERLNFLRFLSHFRAVHRGASFAGLR 2449
             +++ +++E +LKTG + TQSGLD+QQRAG TV AERLNFLRFLS FRAVHRGASFAGLR
Sbjct: 412  PRSVGMSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLR 471

Query: 2448 STSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMTSTCRVTSHFDSQGNIKDFFKIRLSILS 2269
            +T+VRKLLPE+WGFLCPVHTPDGEPCGLLNHMT T R+TS FDS+GNI+DF KIR S++ 
Sbjct: 472  TTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVE 531

Query: 2268 VLTGIGMTPSLPKLVRAGPPEVLAVLLDGRVXXXXXXXIVEKAVSYIRRLKLSESAGIPN 2089
            VL G GM  SLPKLV+A PPEV+ VLLDG+V       +V   VSY+RRLK+   + IP 
Sbjct: 532  VLIGAGMVSSLPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEAPSVIPE 591

Query: 2088 DLEVGYVPLSMGGAYPGLYLFTSPSRFIRPVRNISIPSEEDLDIELIGPFEQVYMEIKCA 1909
            DLEVGYVP SMGG+YPGLYL + P+RFIRPV+NISIPSE    IELIGPFEQV+MEI C 
Sbjct: 592  DLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSE---SIELIGPFEQVFMEISCP 648

Query: 1908 DGGDGGRKNIFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAI 1729
            DGG+GGR N  PATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTMA+S+QA+
Sbjct: 649  DGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQAL 708

Query: 1728 QFRADQKLYHLQTPQTPIVRTTAYTKYNMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSS 1549
            QFRADQK+YHLQTPQ+P+VRT  YT Y++DE PTGTNAIVAVLA+TG+DMEDAMILNKSS
Sbjct: 709  QFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSS 768

Query: 1548 VERGMCHGHIYQLETVDLEDERGNSDHALKLFARSNTDKSMHSSIDSDGLPFVGQIVQPN 1369
            VERGMCHG IYQ E +DL D+    D   K F RS TDKS HS+ID+DGLP+VGQ + P+
Sbjct: 769  VERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQKIYPD 828

Query: 1368 EPYCSIYNTISSTTKPFALKGSEPVIVDYVAIDGKNHKKPLQKVNVRFRRSRNPVIGDKF 1189
            EPY SIY+ +++  +    KG++PVIVD+V++D K+ K P QK N+RFR +RNP+IGDKF
Sbjct: 829  EPYYSIYDEVTNRIRTIKRKGTDPVIVDFVSVDMKSKKHP-QKANIRFRHARNPIIGDKF 887

Query: 1188 SSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIGMLFESIAAKGGSLHG 1009
            SSRHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSRMTI ML ESIAAKGGSLHG
Sbjct: 888  SSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHG 947

Query: 1008 KFVDATPFASSIKTANGEXXXXXXSLVDELGPMLTSHGFNYHGLEVLYSGVLGIEMPCEI 829
            KFVDATPF +++  ANGE       LVD+LG ML   GFNY+G E LYSG+LG+E+ CEI
Sbjct: 948  KFVDATPFRNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGVELECEI 1007

Query: 828  FIGPVYYQRLRHMVSDKFQVRSTGTLDQVTRQPXXXXXXXXXXRFGEMERDAMLAHGAAY 649
            F+GPVYYQRLRHMVSDKFQVRSTG +DQ+T QP          RFGEMERD++LAHGA+Y
Sbjct: 1008 FMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASY 1067

Query: 648  LLHDRLHTCSDHHIADVCSLCGSILTTSFIQ-PQKRAVREIGGLPPGRIPKKVICHACKT 472
            LLHDRLHT SDHHIADVCSLCGS+LT+S     QK+ ++  G LPPGR PKKV C++CKT
Sbjct: 1068 LLHDRLHTSSDHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSCKT 1127

Query: 471  SKGMETVAMPYVFRYLAAELAAMNIKMTLKLSNR 370
            SKGMETVAMPYVFRYLAAELA+MNIKMTLKLS+R
Sbjct: 1128 SKGMETVAMPYVFRYLAAELASMNIKMTLKLSDR 1161