BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00007130
         (482 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                44   5e-07
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       43   1e-06
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    41   3e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 43.5 bits (101), Expect(2) = 5e-07
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = +2

Query: 128  ENKIRNK*IQKDVCVATIGYKLRESQQRWFGHIQGRLILSPFER 259
            ++KIRN+ I+  V VA I  K+RE+Q RWFGH+Q R   +P  R
Sbjct: 888  KDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRR 931



 Score = 35.8 bits (81), Expect(2) = 5e-07
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
 Frame = +3

Query: 12  FFKTKVKSSMLYRIECWMIKKCHV-KTFIIEM---RWM 113
           F++T ++ +MLY  ECW +K  HV K  + EM   RWM
Sbjct: 845 FYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWM 882


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 42.7 bits (99), Expect(2) = 1e-06
 Identities = 25/68 (36%), Positives = 43/68 (63%)
 Frame = +2

Query: 119 KDWENKIRNK*IQKDVCVATIGYKLRESQQRWFGHIQGRLILSPFERKLKIFEVKWSIKA 298
           K  ++KIRN+ I++ V VA I  K+ E++ RWFGH++ R + S   R++   E + +I+ 
Sbjct: 277 KTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSVL-RRVDQMERRQTIRG 335

Query: 299 RRRESKSL 322
           R R  K++
Sbjct: 336 RGRPKKTI 343



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 12  FFKTKVKSSMLYRIECWMIKKCHV-KTFIIEMRWMNEKIGKIK 137
           F++T V+ ++LY  ECW +K  H  K  + EMR +    GK +
Sbjct: 237 FYRTAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTR 279


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +2

Query: 128 ENKIRNK*IQKDVCVATIGYKLRESQQRWFGHIQGRLILSPFER 259
           ++KIRN+ I+  V VA I   +RE++ RWFGH+Q R   +P  R
Sbjct: 114 KDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTYAPIRR 157



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
 Frame = +3

Query: 12  FFKTKVKSSMLYRIECWMIKKCHV-KTFIIEM---RWM 113
           F++T ++ +MLY  ECW +K  HV K  + EM   RWM
Sbjct: 71  FYRTTIRPAMLYGTECWAVKYQHVHKMGVAEMRMLRWM 108