BLASTX nr result
ID: Akebia24_contig00007036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00007036
(459 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 178 6e-43
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 177 1e-42
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 177 1e-42
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 176 3e-42
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 176 3e-42
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 172 4e-41
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 172 6e-41
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 172 6e-41
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 171 1e-40
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 170 2e-40
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 170 2e-40
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 169 3e-40
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 169 4e-40
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 165 7e-39
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 164 9e-39
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 164 9e-39
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 162 3e-38
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 162 5e-38
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 160 2e-37
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 159 4e-37
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 178 bits (452), Expect = 6e-43
Identities = 92/150 (61%), Positives = 117/150 (78%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
DV SAR+VKG +EK VLGEVA+ +KIVL S ++VV LDM+RI+ + ISA SV+ SI
Sbjct: 1105 DVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSI 1164
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L HPR KLK +HV +++ KLR++P +D+SKL +ELH+ K+MLPKVIVKGI +VERAVI
Sbjct: 1165 LNHPRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVI 1224
Query: 95 NKNKGKYNLLVEGKNLRAVMGTPGVDGCKT 6
++ KY+LLVEG NL AVMGTPGVD KT
Sbjct: 1225 SQTGDKYSLLVEGTNLLAVMGTPGVDAMKT 1254
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 177 bits (449), Expect = 1e-42
Identities = 97/153 (63%), Positives = 121/153 (79%), Gaps = 1/153 (0%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
N+VK+AR+VKG IE+T LG+VAKS+KIVLTSR A I V LDME IQASQL I ++ V++S
Sbjct: 1534 NNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRES 1593
Query: 278 ILQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAV 99
IL++ R KLK QH+++L+ KL +HP DRS +HFELH+ K +LP V+VKGI +VERAV
Sbjct: 1594 ILRNRRIKLKQQHIKVLDAGKLEVHPQG-DRSTIHFELHALKNLLPTVVVKGIETVERAV 1652
Query: 98 INK-NKGKYNLLVEGKNLRAVMGTPGVDGCKTT 3
INK NK KYNLLVEG L+ VMGT GV G +TT
Sbjct: 1653 INKDNKVKYNLLVEGTGLQTVMGTEGVIGRETT 1685
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 177 bits (449), Expect = 1e-42
Identities = 97/153 (63%), Positives = 121/153 (79%), Gaps = 1/153 (0%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
N+VK+AR+VKG IE+T LG+VAKS+KIVLTSR A I V LDME IQASQL I ++ V++S
Sbjct: 1098 NNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRES 1157
Query: 278 ILQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAV 99
IL++ R KLK QH+++L+ KL +HP DRS +HFELH+ K +LP V+VKGI +VERAV
Sbjct: 1158 ILRNRRIKLKQQHIKVLDAGKLEVHPQG-DRSTIHFELHALKNLLPTVVVKGIETVERAV 1216
Query: 98 INK-NKGKYNLLVEGKNLRAVMGTPGVDGCKTT 3
INK NK KYNLLVEG L+ VMGT GV G +TT
Sbjct: 1217 INKDNKVKYNLLVEGTGLQTVMGTEGVIGRETT 1249
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 176 bits (446), Expect = 3e-42
Identities = 94/154 (61%), Positives = 118/154 (76%), Gaps = 4/154 (2%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
DV SARIVKG +EK VLGEVA+++KIVL S ++VV LDM+RI+A + ISA SV+ SI
Sbjct: 1033 DVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSI 1092
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L HP+ KLK +HV +++ KLRI+P +D+SKL +ELH K+MLPKVIVKGI +VERAVI
Sbjct: 1093 LNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVI 1152
Query: 95 N----KNKGKYNLLVEGKNLRAVMGTPGVDGCKT 6
+ +N +Y LLVEG NL AVMGTPGVD KT
Sbjct: 1153 SETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKT 1186
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 176 bits (446), Expect = 3e-42
Identities = 94/154 (61%), Positives = 118/154 (76%), Gaps = 4/154 (2%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
DV SARIVKG +EK VLGEVA+++KIVL S ++VV LDM+RI+A + ISA SV+ SI
Sbjct: 1095 DVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSI 1154
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L HP+ KLK +HV +++ KLRI+P +D+SKL +ELH K+MLPKVIVKGI +VERAVI
Sbjct: 1155 LNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVI 1214
Query: 95 N----KNKGKYNLLVEGKNLRAVMGTPGVDGCKT 6
+ +N +Y LLVEG NL AVMGTPGVD KT
Sbjct: 1215 SETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKT 1248
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 172 bits (436), Expect = 4e-41
Identities = 94/155 (60%), Positives = 114/155 (73%), Gaps = 5/155 (3%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
DV SARIVKG +EK VLGEVA ++KIVL S ++VV LDM+ I+A + ISA SV+ SI
Sbjct: 1108 DVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSI 1167
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L HP+ KLK +HV +++ KLRI+P D+SKL ELH+ KAMLPKVIVKGI +VER VI
Sbjct: 1168 LNHPKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVI 1227
Query: 95 NKNK-----GKYNLLVEGKNLRAVMGTPGVDGCKT 6
++ K KYNLLVEG NL AVMGTPGVD T
Sbjct: 1228 DERKKEGKLEKYNLLVEGTNLLAVMGTPGVDARNT 1262
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 172 bits (435), Expect = 6e-41
Identities = 92/155 (59%), Positives = 117/155 (75%), Gaps = 3/155 (1%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
NDVK+ARIVKG IEKT LG+VAKS+KIVL A + + LDM+RI + QL I A +V ++
Sbjct: 1109 NDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVAEA 1168
Query: 278 ILQHPRTK---LKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVE 108
+L+ P+ K LK QHV++ +D+ + + P DR K+ F LHS + MLPKVIVKGI +VE
Sbjct: 1169 VLKFPKIKSMKLKEQHVKVNDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVE 1228
Query: 107 RAVINKNKGKYNLLVEGKNLRAVMGTPGVDGCKTT 3
RAVIN+ KGKYNLLVEG NL+AVMGT GVDG +TT
Sbjct: 1229 RAVINQEKGKYNLLVEGTNLKAVMGTEGVDGRETT 1263
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 172 bits (435), Expect = 6e-41
Identities = 92/155 (59%), Positives = 117/155 (75%), Gaps = 3/155 (1%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
NDVK+ARIVKG IEKT LG+VAKS+KIVL A + + LDM+RI + QL I A +V ++
Sbjct: 1105 NDVKAARIVKGRIEKTALGDVAKSIKIVLRPGQAFVSIKLDMDRIYSLQLDIRAETVAEA 1164
Query: 278 ILQHPRTK---LKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVE 108
+L+ P+ K LK QHV++ +D+ + + P DR K+ F LHS + MLPKVIVKGI +VE
Sbjct: 1165 VLKFPKIKSMKLKEQHVKVNDDRSISLTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVE 1224
Query: 107 RAVINKNKGKYNLLVEGKNLRAVMGTPGVDGCKTT 3
RAVIN+ KGKYNLLVEG NL+AVMGT GVDG +TT
Sbjct: 1225 RAVINQEKGKYNLLVEGTNLKAVMGTEGVDGRETT 1259
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 171 bits (433), Expect = 1e-40
Identities = 92/161 (57%), Positives = 122/161 (75%), Gaps = 10/161 (6%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
+V +ARI KG I+KTVLG+VAKS+KIV+TSR AS+V+TLDM+ IQ +QL + A+ VK++I
Sbjct: 1090 NVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAI 1149
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L+ PR KLKPQH+++L+ +KL + P DR ++HFELH+ K +LP +IV+GI +VERAVI
Sbjct: 1150 LRTPRIKLKPQHIKVLDTRKLEVIPLG-DRERVHFELHNLKNLLPSIIVQGIKTVERAVI 1208
Query: 95 --NKNKGK--------YNLLVEGKNLRAVMGTPGVDGCKTT 3
K+ GK YN+LVEG L VMGT GVDGCKTT
Sbjct: 1209 AQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTT 1249
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 170 bits (431), Expect = 2e-40
Identities = 94/159 (59%), Positives = 118/159 (74%), Gaps = 12/159 (7%)
Frame = -2
Query: 446 SARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSILQH 267
+AR+VKG IEKT+LG+VAKS+KIV+TSR ASIV+ LDME IQ + L I+A VK+SI+Q
Sbjct: 1111 AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQT 1170
Query: 266 PRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI--- 96
P+ KLK QH+++L+ +KL I PP VD+SK+HFEL+S K +LP VIVKGI +VER VI
Sbjct: 1171 PKIKLKQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEK 1229
Query: 95 ---------NKNKGKYNLLVEGKNLRAVMGTPGVDGCKT 6
N K KY LLVEG L+AVMG G+DGCKT
Sbjct: 1230 EKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKT 1268
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 170 bits (431), Expect = 2e-40
Identities = 94/159 (59%), Positives = 118/159 (74%), Gaps = 12/159 (7%)
Frame = -2
Query: 446 SARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSILQH 267
+AR+VKG IEKT+LG+VAKS+KIV+TSR ASIV+ LDME IQ + L I+A VK+SI+Q
Sbjct: 1104 AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQT 1163
Query: 266 PRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI--- 96
P+ KLK QH+++L+ +KL I PP VD+SK+HFEL+S K +LP VIVKGI +VER VI
Sbjct: 1164 PKIKLKQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEK 1222
Query: 95 ---------NKNKGKYNLLVEGKNLRAVMGTPGVDGCKT 6
N K KY LLVEG L+AVMG G+DGCKT
Sbjct: 1223 EKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKT 1261
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 169 bits (429), Expect = 3e-40
Identities = 87/153 (56%), Positives = 119/153 (77%), Gaps = 2/153 (1%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
++ +ARIVKG IEKT LG+VAKS+K+V+TSR AS+V+TLDM+RIQ + L I A+ VK+S
Sbjct: 1104 DNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKES 1163
Query: 278 ILQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAV 99
IL+ +TKLKP+H++IL+ +KL + P +VDRSK+HF+LH K +LP V+VKGI +V+R V
Sbjct: 1164 ILRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVV 1223
Query: 98 INKN--KGKYNLLVEGKNLRAVMGTPGVDGCKT 6
I+K+ K+ LLVEG R VMG G+DG KT
Sbjct: 1224 ISKDTKAEKFRLLVEGTGFREVMGVEGIDGRKT 1256
>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
gi|561005141|gb|ESW04135.1| hypothetical protein
PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 169 bits (428), Expect = 4e-40
Identities = 89/153 (58%), Positives = 116/153 (75%), Gaps = 6/153 (3%)
Frame = -2
Query: 446 SARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSILQH 267
+ARIVKG IEKT LG+VAKS+K+V+TSR AS+V+TLDMERIQ + L I A+ VK+SILQ
Sbjct: 1105 TARIVKGRIEKTNLGQVAKSIKVVVTSRLASVVITLDMERIQDAHLNIDANIVKESILQT 1164
Query: 266 PRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVINKN 87
+ KLKP+H++IL+ +KLR+ P + DRSKLHF+L+ K +LP V+VKGI + +R VI+K
Sbjct: 1165 KKAKLKPEHIKILDVKKLRVVPQDGDRSKLHFQLNYLKNLLPSVVVKGIKTADRVVISKE 1224
Query: 86 KG------KYNLLVEGKNLRAVMGTPGVDGCKT 6
+ K+ LLVEG R VMG GVDGCKT
Sbjct: 1225 EDKITKAEKFKLLVEGTGFREVMGVEGVDGCKT 1257
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 165 bits (417), Expect = 7e-39
Identities = 91/148 (61%), Positives = 111/148 (75%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
ND K+ARIVKG IEKT LGEVAKS+K VL + A I V LDM+RI A QL I++ +V +
Sbjct: 1112 NDEKAARIVKGRIEKTTLGEVAKSIKTVLRASQAIISVKLDMKRIDALQLDINSDTVALA 1171
Query: 278 ILQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAV 99
I+Q P+ KLK ++ I++ KL + PP+ D+ KL+F LHS MLPKVIVKGI SVERAV
Sbjct: 1172 IVQTPKIKLKHVNIRIVDRDKLIVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAV 1231
Query: 98 INKNKGKYNLLVEGKNLRAVMGTPGVDG 15
INK KG YNLLVEG NL+AVMG GV+G
Sbjct: 1232 INKEKGVYNLLVEGTNLKAVMGISGVNG 1259
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 164 bits (416), Expect = 9e-39
Identities = 89/150 (59%), Positives = 111/150 (74%), Gaps = 7/150 (4%)
Frame = -2
Query: 434 VKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLR-ISAHSVKQSILQHPRT 258
VK CIEK VLGEVA ++KIVL S ++VV LDM+RI+A I+A SV+ SI+ +P+
Sbjct: 832 VKRCIEKVVLGEVAAAIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKL 891
Query: 257 KLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVINKNKG- 81
KLK QHV ++++ KLRI+P DRSKL FELH+ K+MLPKVIVKGI +VERAV+N KG
Sbjct: 892 KLKSQHVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGR 951
Query: 80 -----KYNLLVEGKNLRAVMGTPGVDGCKT 6
+YNLLVEG NL AV+G PGVD KT
Sbjct: 952 DKTIERYNLLVEGTNLLAVLGAPGVDAMKT 981
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 164 bits (416), Expect = 9e-39
Identities = 89/150 (59%), Positives = 111/150 (74%), Gaps = 7/150 (4%)
Frame = -2
Query: 434 VKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLR-ISAHSVKQSILQHPRT 258
VK CIEK VLGEVA ++KIVL S ++VV LDM+RI+A I+A SV+ SI+ +P+
Sbjct: 963 VKRCIEKVVLGEVAAAIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKL 1022
Query: 257 KLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVINKNKG- 81
KLK QHV ++++ KLRI+P DRSKL FELH+ K+MLPKVIVKGI +VERAV+N KG
Sbjct: 1023 KLKSQHVRVIDEAKLRIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGR 1082
Query: 80 -----KYNLLVEGKNLRAVMGTPGVDGCKT 6
+YNLLVEG NL AV+G PGVD KT
Sbjct: 1083 DKTIERYNLLVEGTNLLAVLGAPGVDAMKT 1112
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 162 bits (411), Expect = 3e-38
Identities = 92/158 (58%), Positives = 118/158 (74%), Gaps = 12/158 (7%)
Frame = -2
Query: 443 ARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSILQHP 264
A+IVKG IEKTVLG+VAKS+KIV+TSR AS+V+TLDME I ++L I A+ VK+SILQ P
Sbjct: 1104 AQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTP 1163
Query: 263 RTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI-NKN 87
+ KLK QHV++L+ +KL + PP DRS++HFELHS K +LP V+VKGI +VER V+ +KN
Sbjct: 1164 KIKLKEQHVKVLDGRKLEVVPP-ADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKN 1222
Query: 86 KGKYN-----------LLVEGKNLRAVMGTPGVDGCKT 6
K K N LLVEG L+AVMG G+DG +T
Sbjct: 1223 KEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRT 1260
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 162 bits (410), Expect = 5e-38
Identities = 88/155 (56%), Positives = 113/155 (72%), Gaps = 5/155 (3%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
DV SARIVKG +EK VLGEVA +++IVL S +++V LDM+ I++ + ISA SV+ SI
Sbjct: 1102 DVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSI 1161
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L HP+ KLK +HV +++ KLRI+P D+ KL ELH+ K++LPKVIVKGI +VER VI
Sbjct: 1162 LNHPKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVERVVI 1221
Query: 95 NKNKGK-----YNLLVEGKNLRAVMGTPGVDGCKT 6
++ K K Y LLVEG NL AVMGTPGVD KT
Sbjct: 1222 DEVKVKNETERYQLLVEGTNLLAVMGTPGVDATKT 1256
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 160 bits (404), Expect = 2e-37
Identities = 88/161 (54%), Positives = 115/161 (71%), Gaps = 10/161 (6%)
Frame = -2
Query: 458 NDVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQS 279
++V +ARI+KG I+KTVLG+VAKS+KIV+TSR AS+ VTLDM+ I+ +QL + A+ V++
Sbjct: 1116 SNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVREL 1175
Query: 278 ILQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAV 99
IL+ P+ K K Q + +L D KL + P DR+KLHFELHS K MLP V+VKGI +VER V
Sbjct: 1176 ILETPKIKRKLQRINVLEDGKLEVFPGG-DRNKLHFELHSLKNMLPAVVVKGIKTVERVV 1234
Query: 98 INKNK----------GKYNLLVEGKNLRAVMGTPGVDGCKT 6
I + K KYN+ VEG L+AVMGT GVDG KT
Sbjct: 1235 IAQKKLDDAENDQGGPKYNMFVEGMGLQAVMGTEGVDGRKT 1275
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 159 bits (402), Expect = 4e-37
Identities = 88/155 (56%), Positives = 111/155 (71%), Gaps = 5/155 (3%)
Frame = -2
Query: 455 DVKSARIVKGCIEKTVLGEVAKSMKIVLTSRHASIVVTLDMERIQASQLRISAHSVKQSI 276
DV SARIVKG +EK VLGEVA +++ VL S ++VV LDM+ I+ + ISA SVK SI
Sbjct: 47 DVLSARIVKGSMEKAVLGEVAATIQTVLKSSLPNLVVKLDMQLIETLHMGISADSVKLSI 106
Query: 275 LQHPRTKLKPQHVEILNDQKLRIHPPNVDRSKLHFELHSYKAMLPKVIVKGISSVERAVI 96
L HP+ KLK +HV +++ KLRI+P D+ KL ELH+ K++LPKVIVKGI +VER VI
Sbjct: 107 LNHPKLKLKSEHVRVIDRAKLRIYPAGTDKLKLQLELHNLKSILPKVIVKGIPTVERVVI 166
Query: 95 NKNK-----GKYNLLVEGKNLRAVMGTPGVDGCKT 6
++ K +Y LLVEG NL AVMGTPGVD KT
Sbjct: 167 DEVKVNNATERYQLLVEGTNLLAVMGTPGVDARKT 201