BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00007035
         (1399 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   734   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   697   0.0  
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   684   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   684   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   664   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   662   0.0  
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   661   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   657   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   651   0.0  
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...   650   0.0  
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   648   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   648   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   646   0.0  
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   641   0.0  
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s...   631   e-178
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela...   630   e-178
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   626   e-177
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi...   625   e-176
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   624   e-176
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   619   e-174

>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  734 bits (1894), Expect = 0.0
 Identities = 364/466 (78%), Positives = 401/466 (86%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGLFSVLLRDYN+HAAASCMNRLAKLSARWIGNHGFSIGIDDV P  
Sbjct: 639  GQLGKATLGNGNKDGLFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGS 698

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +L ++K+  I+ GY  CD  I +YDKG+L L+PGC+AAQTLEAEIT VLNGIR+A AKVC
Sbjct: 699  HLTKQKEEQIKGGYSNCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVC 758

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M+ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPR  KT
Sbjct: 759  MEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKT 818

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFYTGLTA EFFFHTMGGREGLVDTAVKTADTGY+SRRLIK+LEDLS HYD
Sbjct: 819  PAAKGFVANSFYTGLTAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYD 878

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
            DTVRNSSG +IQF YGDDGMDPA+MEGK+GVPLNLDRL++KIKATCP+S  A+LSPSE+ 
Sbjct: 879  DTVRNSSGTIIQFSYGDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEIS 938

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
             IVN+RLS+HDMTPE GCS AFK+ L +F  KR+  +K TR +L LDE+ VDK     LE
Sbjct: 939  TIVNDRLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLE 998

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             VAANISG++ QQL+VFLETCI+RYHLK+                EPGTQMTLKTFHFAG
Sbjct: 999  HVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1058

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMNITLGVPRIKEI+  +K ISTPIITATL CDND KSARIVKG
Sbjct: 1059 VASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKG 1104


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  697 bits (1799), Expect = 0.0
 Identities = 351/466 (75%), Positives = 393/466 (84%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGLFSVLLRDYNAHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP G
Sbjct: 645  GQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGG 704

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             LN +K   IE+GYE C +LIQ Y+KG+LKLQPGC+AAQTLEAEITGVLN IRE TA VC
Sbjct: 705  LLNDQKSKRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVC 764

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M+ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPRKSKT
Sbjct: 765  MEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKT 824

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            P AKGFVA+SFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD
Sbjct: 825  PDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYD 884

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
            +TVRN++G ++QF YGDDGMDPA+MEGK+G PLN +RL+LK+KATCP+  +A+LS  ++ 
Sbjct: 885  ETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIE 944

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            E V  RL  H+ + E GCSDAFK +L  F  +     KNTR  L L  EHV + N    E
Sbjct: 945  ETV-KRLKEHNTSAE-GCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQE 1002

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
            K A NISG+TS+QLQVFL+TCI+RY LK+                EPGTQMTLKTFHFAG
Sbjct: 1003 KFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAG 1062

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIINGAK ISTPIITA LEC+N+VK+AR+VKG
Sbjct: 1063 VASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKG 1108


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  684 bits (1766), Expect = 0.0
 Identities = 336/466 (72%), Positives = 386/466 (82%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GKATLGNGNKDG+FS L+RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  
Sbjct: 577  GQVGKATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGE 636

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +LN+EKK  I+ GY+ C  LI SY KG L+LQPGC+AAQTLE  IT VLN IRE   KVC
Sbjct: 637  HLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVC 696

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP  SKT
Sbjct: 697  MNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKT 756

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD
Sbjct: 757  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYD 816

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+SGG++QF YGDDGMDPA+MEGK+G PLNLD+L++K+ ATCP      LSP E+L
Sbjct: 817  QTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEIL 876

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            +I+N++LS HD + + GCS+ FK+ L  F   RI  +K+TRR L LDE+HV + +S F E
Sbjct: 877  QILNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEE 936

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             +AANISG++ +QLQVFL+TC++RYHLKK                EPGTQMTLKTFHFAG
Sbjct: 937  SIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 996

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIIN AK ISTPIITA L  + DV SARIVKG
Sbjct: 997  VASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKG 1042


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  684 bits (1766), Expect = 0.0
 Identities = 336/466 (72%), Positives = 386/466 (82%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GKATLGNGNKDG+FS L+RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  
Sbjct: 639  GQVGKATLGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGE 698

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +LN+EKK  I+ GY+ C  LI SY KG L+LQPGC+AAQTLE  IT VLN IRE   KVC
Sbjct: 699  HLNQEKKMKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVC 758

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP  SKT
Sbjct: 759  MNTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKT 818

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD
Sbjct: 819  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYD 878

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+SGG++QF YGDDGMDPA+MEGK+G PLNLD+L++K+ ATCP      LSP E+L
Sbjct: 879  QTVRNASGGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEIL 938

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            +I+N++LS HD + + GCS+ FK+ L  F   RI  +K+TRR L LDE+HV + +S F E
Sbjct: 939  QILNDKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEE 998

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             +AANISG++ +QLQVFL+TC++RYHLKK                EPGTQMTLKTFHFAG
Sbjct: 999  SIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 1058

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIIN AK ISTPIITA L  + DV SARIVKG
Sbjct: 1059 VASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKG 1104


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  664 bits (1714), Expect = 0.0
 Identities = 327/466 (70%), Positives = 380/466 (81%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GKATLGNGNKDGL+SVLLRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  
Sbjct: 646  GQVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGE 705

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +LNR+KK  I+ GY+ C  LI  + KG L L PGC+AAQTLE  ITGVLN IR     VC
Sbjct: 706  HLNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVC 765

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            MD LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GF++R+LPHFP  SKT
Sbjct: 766  MDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKT 825

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD
Sbjct: 826  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYD 885

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+SGG++QF YGDDGMDPA+MEGK+G+PLNLD+L++K+ ATCP      LSP  + 
Sbjct: 886  QTVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIK 945

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            +++ ++L +HD + +GGCS+ FKK+L +F  KRI  MK TRR L L E+HV+K +S   E
Sbjct: 946  QMLEDKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEE 1005

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             VAA ISG++++QLQVFL+TC++RY  KK                EPGTQMTLKTFHFAG
Sbjct: 1006 SVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 1065

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIIN A+ ISTPIITA L    DV SARIVKG
Sbjct: 1066 VASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKG 1111


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  662 bits (1709), Expect = 0.0
 Identities = 325/466 (69%), Positives = 381/466 (81%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GKATLGNGNKDG++SVLLRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  
Sbjct: 652  GQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGE 711

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +LNR+KK  I++GY+ C  LI  + KG L L PGC+AAQTLE +ITGVLN IR A   VC
Sbjct: 712  HLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVC 771

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            MD LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP  SKT
Sbjct: 772  MDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKT 831

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD
Sbjct: 832  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYD 891

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+SGG++QF YGDDGMDPA+MEGK+G PLNLD+L++K+ ATCP      LSP ++ 
Sbjct: 892  QTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIK 951

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            +++ ++L++H  + +GGCS+ FK+ L  F  +RI  +K TR+ L LDE+HV KN+S   E
Sbjct: 952  QMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEE 1011

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             +AANISG++++QLQVFL+TC +RY+ K                 EPGTQMTLKTFHFAG
Sbjct: 1012 IIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAG 1071

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIIN AK ISTPIIT  L    DV SARIVKG
Sbjct: 1072 VASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKG 1117


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  661 bits (1705), Expect = 0.0
 Identities = 329/466 (70%), Positives = 368/466 (78%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGK TLGNGNKDGL+S+LLRDY AHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP  
Sbjct: 431  GQLGKGTLGNGNKDGLYSILLRDYKAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPSD 490

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             L  EK   I +G + CD  I+SY +G L  +PGCDAAQ+LEA ITG+LN IRE T K+C
Sbjct: 491  KLRDEKDQKINEGAKDCDDKIKSYKEGNLPPEPGCDAAQSLEAVITGILNKIREETGKLC 550

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  L WRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK KT
Sbjct: 551  MKALPWRNSPLIMSQCGSKGSLINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKDKT 610

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFV++SFY GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDL +HYD
Sbjct: 611  PAAKGFVSHSFYDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLFVHYD 670

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
            +TVRN+S  +IQF YGDDGMDPA MEGKNG PLN +RL+LK KATCP+     LSP +V 
Sbjct: 671  NTVRNASACIIQFCYGDDGMDPAHMEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVS 730

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            E+V +RLS+ DMTPEGGCS AFK SL  F    +   K T    +  E H    NS   +
Sbjct: 731  ELVESRLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTK 790

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             +   +SG T++QL+VFL+TCI+RYH KK                EPGTQMTLKTFHFAG
Sbjct: 791  NIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 850

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIINGAK ISTPIITA LECDN+V  ARIV+G
Sbjct: 851  VASMNVTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIVRG 896


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  657 bits (1696), Expect = 0.0
 Identities = 326/483 (67%), Positives = 384/483 (79%), Gaps = 17/483 (3%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GK TLGNGNKDG+FS+L+RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDV+P  
Sbjct: 633  GQVGKKTLGNGNKDGMFSILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGE 692

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +L+++KK  I++GY+ C  LI S+ KG L LQPGC+AAQTLE +IT VLN IREA   +C
Sbjct: 693  HLDQQKKKKIDEGYKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNIC 752

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            MD LHWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGG RAPNGFIDR+LPHFP  SKT
Sbjct: 753  MDTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKT 812

Query: 541  PAAKGFVANSFYTGLT-----------------ATEFFFHTMGGREGLVDTAVKTADTGY 669
            PAAKGFVANSFY GLT                 ATEFFFHTMGGREGLVDTAVKTA+TGY
Sbjct: 813  PAAKGFVANSFYNGLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGY 872

Query: 670  MSRRLIKALEDLSIHYDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIK 849
            MSRRL+K LEDLS+ YD TVRN+SGG++QF YGDDGMDPA+MEG++G PLNLD+L++K+ 
Sbjct: 873  MSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVM 932

Query: 850  ATCPSSTHANLSPSEVLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRL 1029
            ATCP      LSP E+L+I+N++LS HD + + GCS+ FK+ L DF   RI  +K+TRR 
Sbjct: 933  ATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRA 992

Query: 1030 LQLDEEHVDKNNSVFLEKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXX 1209
            L LDE HV K++S+  E +AANISG++++QLQVFL+TC++RYH KK              
Sbjct: 993  LCLDENHVGKDSSI-EESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQS 1051

Query: 1210 XXEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARI 1389
              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIIN AK ISTPIITA L    DV SAR+
Sbjct: 1052 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARV 1111

Query: 1390 VKG 1398
            VKG
Sbjct: 1112 VKG 1114


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  651 bits (1680), Expect = 0.0
 Identities = 331/474 (69%), Positives = 374/474 (78%), Gaps = 9/474 (1%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GKATLGNGNKDGL+SVLLRDY AHAAA CMNRLAKLSARWIGNHGFSIGIDDVQP  
Sbjct: 645  GQVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGD 704

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             L ++K+ +I +GY  CDK I  ++ G L  + GCDAAQ+LE++IT +LNGIREATA VC
Sbjct: 705  QLVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVC 764

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF RK+KT
Sbjct: 765  MQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKT 824

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD
Sbjct: 825  PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 884

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             +VRN+ G ++QF YGDDGMDPAQMEGK+G PLN +RL+LK KATCPS  +  LSPSE  
Sbjct: 885  SSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFS 944

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHV--------- 1053
            E V +RLS+ D +PE GCS AF  SL  F +K +   K +   L  D E           
Sbjct: 945  ETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSS 1004

Query: 1054 DKNNSVFLEKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQM 1233
            D +N V   KV  NI+GVT +QLQVFL+TC++RYH KK                EPGTQM
Sbjct: 1005 DNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQM 1064

Query: 1234 TLKTFHFAGVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVK 1395
            TLKTFHFAGVASMN+TLGVPRIKEIINGAK ISTPI+TA L  D++V  AR+VK
Sbjct: 1065 TLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVK 1118


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score =  650 bits (1677), Expect = 0.0
 Identities = 323/466 (69%), Positives = 368/466 (78%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGK TLGNGNKDGLFSVLLRDY AHAAASCMNR+AKLSARWIGNHGFSIGI DVQP  
Sbjct: 647  GQLGKGTLGNGNKDGLFSVLLRDYKAHAAASCMNRVAKLSARWIGNHGFSIGISDVQPSD 706

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             L  EK+  I+KGY+ CD  I+ Y +GQL+L PGCDAAQ+LE+ IT VLN IR+ T K+C
Sbjct: 707  ILYGEKEKIIKKGYDKCDDQIKLYKEGQLRLAPGCDAAQSLESGITAVLNDIRDQTGKLC 766

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK  T
Sbjct: 767  MQTLHWRNSPLIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNT 826

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVA+SFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD
Sbjct: 827  PAAKGFVASSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYD 886

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVR ++GG++QF YGDDGMDPA MEGK+G PL+  RL+ + KATCP+    +LSP EV 
Sbjct: 887  KTVRAANGGIVQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVS 946

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            EIV +RLS  DMTP+GGCS  FK S+  F  + +  ++ T+    L++    +  S  L+
Sbjct: 947  EIVRSRLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQ 1006

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             +  NISGVT +QL+VFL+TCI+RYH KK                EPGTQMTLKTFHFAG
Sbjct: 1007 NIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAG 1066

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMN+TLGVPRIKEIINGAKNI TPIIT  LECDN+   AR+V G
Sbjct: 1067 VASMNVTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAG 1112


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  648 bits (1671), Expect = 0.0
 Identities = 321/466 (68%), Positives = 376/466 (80%), Gaps = 1/466 (0%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV P  
Sbjct: 640  GQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 699

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            NL ++K+  I + Y+ C+  I  +++G+L +QPGCDAAQTLEAE+T  LN +R+   K+C
Sbjct: 700  NLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 759

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  L WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK 
Sbjct: 760  MKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKF 819

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 820  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+S  ++QF YGDDGMDP+QME K G PLN  RL++K+KATCP     +LS SE+ 
Sbjct: 880  STVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRIT-TMKNTRRLLQLDEEHVDKNNSVFL 1077
            EIVN RLS HDMTPEGGCS+AF+ SL DF  K +  T+KN R  L L EE  + ++  +L
Sbjct: 940  EIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYL 999

Query: 1078 EKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 1257
            EK+A NISG+T +QLQVFL TCI+RYHLK+                EPGTQMTLKTFHFA
Sbjct: 1000 EKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1059

Query: 1258 GVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVK 1395
            GVASMN+TLGVPRIKEIIN AK I+TPIIT  L    ++ +AR++K
Sbjct: 1060 GVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIK 1105


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  648 bits (1671), Expect = 0.0
 Identities = 321/466 (68%), Positives = 376/466 (80%), Gaps = 1/466 (0%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV P  
Sbjct: 640  GQLGKATLGNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 699

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            NL ++K+  I + Y+ C+  I  +++G+L +QPGCDAAQTLEAE+T  LN +R+   K+C
Sbjct: 700  NLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 759

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  L WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK 
Sbjct: 760  MKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKF 819

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 820  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+S  ++QF YGDDGMDP+QME K G PLN  RL++K+KATCP     +LS SE+ 
Sbjct: 880  STVRNASACIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRIT-TMKNTRRLLQLDEEHVDKNNSVFL 1077
            EIVN RLS HDMTPEGGCS+AF+ SL DF  K +  T+KN R  L L EE  + ++  +L
Sbjct: 940  EIVNERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYL 999

Query: 1078 EKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 1257
            EK+A NISG+T +QLQVFL TCI+RYHLK+                EPGTQMTLKTFHFA
Sbjct: 1000 EKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1059

Query: 1258 GVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVK 1395
            GVASMN+TLGVPRIKEIIN AK I+TPIIT  L    ++ +AR++K
Sbjct: 1060 GVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIK 1105


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  646 bits (1667), Expect = 0.0
 Identities = 320/466 (68%), Positives = 376/466 (80%), Gaps = 1/466 (0%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGL+SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGIDDV P  
Sbjct: 640  GQLGKATLGNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGE 699

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            NL ++K+  I + Y+ C+  I  +++G+L +QPGCDAAQTLEAE+T  LN +R+   K+C
Sbjct: 700  NLVKQKQGEIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKIC 759

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  L WRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK 
Sbjct: 760  MKALDWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKF 819

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVA+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD
Sbjct: 820  PAAKGFVAHSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYD 879

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+S  ++QF YGDDGMDP++ME K G PLN  RL++K+KATCP     +LS SE+ 
Sbjct: 880  STVRNASACIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEIC 939

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRIT-TMKNTRRLLQLDEEHVDKNNSVFL 1077
            EIVN RLS HDMTPEGGCS+AF+ SL DF  K +  T+KN R  L L EE  + ++  +L
Sbjct: 940  EIVNERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYL 999

Query: 1078 EKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 1257
            EK+  NISG+T +QLQVFL TCI+RYHLK+                EPGTQMTLKTFHFA
Sbjct: 1000 EKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1059

Query: 1258 GVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVK 1395
            GVASMN+TLGVPRIKEIIN AK I+TPIITA L    ++ +AR++K
Sbjct: 1060 GVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIK 1105


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score =  641 bits (1653), Expect = 0.0
 Identities = 315/467 (67%), Positives = 374/467 (80%), Gaps = 2/467 (0%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQ+GK TLGNGNKDG+FSVL+RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  
Sbjct: 644  GQVGKKTLGNGNKDGMFSVLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGE 703

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQ--LKLQPGCDAAQTLEAEITGVLNGIREATAK 354
            +LN++KK +I++GY  C  LI  Y KG    +L PGC+ AQTLE  ++ +LN +RE   +
Sbjct: 704  SLNQKKKKTIDQGYTECHDLIAVYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGE 763

Query: 355  VCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKS 534
             CM+ LHWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGGRRAP+GFIDR+LPHFP  S
Sbjct: 764  HCMNTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIHS 823

Query: 535  KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 714
            KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ 
Sbjct: 824  KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVF 883

Query: 715  YDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSE 894
            YD TVRN+S G++QF YGDDGMDP +MEGK G PLNLD+L++K+KATCP   H  LSP  
Sbjct: 884  YDQTVRNASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEA 943

Query: 895  VLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVF 1074
            +++++N++LS  DM+  GGCSD FK+ L  FF  RI  +++TRR L LDE+HV   +S  
Sbjct: 944  IMQMLNDKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSI 1002

Query: 1075 LEKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 1254
             E++AANISG++++QLQVFL+TC++RYH K                 EPGTQMTLKTFHF
Sbjct: 1003 EERIAANISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHF 1062

Query: 1255 AGVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVK 1395
            AGVASMN+TLGVPRIKEIIN AKNISTPIITA L    D+  A  VK
Sbjct: 1063 AGVASMNVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVK 1109


>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1400

 Score =  631 bits (1627), Expect = e-178
 Identities = 312/465 (67%), Positives = 365/465 (78%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGK TLGNGNK+G+FSVLLRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQP  
Sbjct: 649  GQLGKKTLGNGNKEGMFSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGQ 708

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
            +LN++KK  I++GYE C+KLI  Y KG LK QPGC  AQTLE++I+ VLN +RE     C
Sbjct: 709  SLNKKKKVIIDEGYEECNKLIALYSKGHLKPQPGCSRAQTLESQISCVLNKLRETAGDDC 768

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  LHWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGG RAPNGFIDR+LPHFP  SKT
Sbjct: 769  MSTLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGCRAPNGFIDRTLPHFPINSKT 828

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFYTGLTA+EFFFHTMGGREGLVDTAVKTADTGY+SRRL+K LEDLS+ YD
Sbjct: 829  PAAKGFVANSFYTGLTASEFFFHTMGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYD 888

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRN+SGG++QF YGDDGMDP +MEGK G PLNLD+L++K+KATCP   H  LSP  +L
Sbjct: 889  QTVRNASGGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDTLSPDVIL 948

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            ++ N+ L + + T  G CSD  K+ L  F   R+  +++TRR L +DE+HV + +S   E
Sbjct: 949  QMFNDTLFKQE-TSSGRCSDKLKEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEE 1007

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             +AA+ISG++++QLQVFL+TC +RYH K                 EPGTQMTLKTFHFAG
Sbjct: 1008 CIAADISGISAKQLQVFLDTCFSRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAG 1067

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVK 1395
            VASMN+TLGVPRIKEIIN AK  STPIIT  L    D   A  VK
Sbjct: 1068 VASMNVTLGVPRIKEIINAAKKTSTPIITTELLSGQDKSFAVKVK 1112


>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
            gi|300146624|gb|EFJ13293.1| hypothetical protein
            SELMODRAFT_446351 [Selaginella moellendorffii]
          Length = 1393

 Score =  630 bits (1625), Expect = e-178
 Identities = 326/466 (69%), Positives = 362/466 (77%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGK TLGNG+KDGLF+VLLRDY   AAASCMNRLAKLSARWIGNHGFSIGIDDVQP  
Sbjct: 657  GQLGKGTLGNGSKDGLFTVLLRDYGEQAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGS 716

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             L  EK+  I +GY ACDK I  ++KGQL LQPGCDAAQTLE+EITG LN IREA  +VC
Sbjct: 717  RLTVEKEKRIAEGYRACDKHISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVC 776

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            ++ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSV G RAPNGFI+RSLPHFPR  KT
Sbjct: 777  VNELHWRNSPLIMSQCGSKGSVINISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKT 836

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            P AKGFVANSFY+GLTATEF FHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS  YD
Sbjct: 837  PQAKGFVANSFYSGLTATEFIFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYD 896

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRNSSG ++Q  YGDD MDP  MEG+NG PLNLDR+ +K KATCP  T   L PSE+ 
Sbjct: 897  GTVRNSSGVIVQLIYGDDSMDPVSMEGQNGTPLNLDRVLMKAKATCPRGTTPALPPSELW 956

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            +IV ++ S+        CS AF  SL  F  K   T+ +TR+ L L    +D   +V  E
Sbjct: 957  KIVESKFSQDG----SECSTAFLDSLRKFLRKEFDTISSTRKRLSLP---LDDFGNVDDE 1009

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
             VAAN+SG+TS+QL+VFL TCI RYH KK                EPGTQMTLKTFHFAG
Sbjct: 1010 NVAANVSGLTSRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1069

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMNITLGVPRIKEIIN +K ISTPIITA L  +NDVK+ARIVKG
Sbjct: 1070 VASMNITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKG 1115


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  626 bits (1614), Expect = e-177
 Identities = 320/476 (67%), Positives = 367/476 (77%), Gaps = 10/476 (2%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLS--ARWIGNHGFSIGIDDVQP 174
            GQLGKATLGNGNKDGL+S+LLRDYN HAAA+CMNRLAKL   ARWIGNHGFSIGIDDVQP
Sbjct: 624  GQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNHGFSIGIDDVQP 683

Query: 175  RGNLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAK 354
               L   K  +I  GY+ CDKLI+ Y++G+L L+PGCDA QTLE+EIT  LN +RE    
Sbjct: 684  GKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLREEAGD 743

Query: 355  VCMDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKS 534
            VCM ELHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRSLPHFPRKS
Sbjct: 744  VCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRKS 803

Query: 535  KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 714
            KTPAAKGFVANSFY+GL ATEFFFHTM GREGLVDTAVKTADTGYMSRRLIK LEDLSI 
Sbjct: 804  KTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQ 863

Query: 715  YDDTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSE 894
            YD+TVRN+SG ++QF YGDDG+DPA MEGK GVPLNLDRL+ K+KATCP      LSP +
Sbjct: 864  YDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPLD 923

Query: 895  VLEIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKN---- 1062
            + ++V N L +HDM   G CS+AFKKSL  F       +++  +L    E+   +N    
Sbjct: 924  ISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTG 983

Query: 1063 ----NSVFLEKVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQ 1230
                NS  +E++A  I GV+ +Q++VF++TCI RY  K+                EPGTQ
Sbjct: 984  GIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQ 1043

Query: 1231 MTLKTFHFAGVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            MTLKTFHFAGVASMNIT GVPRIKEIINGAK ISTPIITA LE + +V +ARI KG
Sbjct: 1044 MTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKG 1099


>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
            predicted protein [Physcomitrella patens]
          Length = 1397

 Score =  625 bits (1612), Expect = e-176
 Identities = 323/471 (68%), Positives = 361/471 (76%), Gaps = 5/471 (1%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGLF+VLLRDY   AAA CMNRLAKLSARWIGNHGFSIGIDDV P  
Sbjct: 654  GQLGKATLGNGNKDGLFTVLLRDYGNEAAAVCMNRLAKLSARWIGNHGFSIGIDDVAPSD 713

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             LNREK+  I KGY ACD+ IQ Y KG+L+LQPGC+AAQTLE+ +TG LN IREA   VC
Sbjct: 714  RLNREKEKQITKGYNACDQHIQLYKKGKLELQPGCNAAQTLESAVTGELNKIREAAGNVC 773

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
             DELHWRNSPLIMS+CGSKGS INISQM+ACVGQQSVGG+RAPNGFIDR+LPHFPR  +T
Sbjct: 774  KDELHWRNSPLIMSECGSKGSFINISQMVACVGQQSVGGKRAPNGFIDRTLPHFPRHDRT 833

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            P  KGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS  YD
Sbjct: 834  PQGKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSAQYD 893

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
             TVRNSSGG++Q  YGDDGMDP  MEGK+G P NLDR+ +K KATCPS     L P+E+ 
Sbjct: 894  GTVRNSSGGIVQLLYGDDGMDPVYMEGKDGAPFNLDRMLMKTKATCPSYGQLGLPPTEIE 953

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            ++ N RL++ DMT E     AFK SL  F    I    +TR  L L  +     +   LE
Sbjct: 954  KLFNERLTKPDMTSE--TVGAFKTSLKKFMDSCIKDNISTRTKLGLPLDCNGGPDQTLLE 1011

Query: 1081 KVAANISGVTSQQ-----LQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKT 1245
              A  ISG+TS+Q     LQVFL+TCI RYH+K+                EPGTQMTLKT
Sbjct: 1012 STATYISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKT 1071

Query: 1246 FHFAGVASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            FHFAGVASMNITLGVPRIKEIIN +KNISTPIITA L   ND K+ARIVKG
Sbjct: 1072 FHFAGVASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKG 1122


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  624 bits (1610), Expect = e-176
 Identities = 318/466 (68%), Positives = 365/466 (78%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGL+SVLLRDYNAHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP  
Sbjct: 651  GQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGK 710

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             LN EK  +I   Y+ CD+ IQ++++G+LK +PG DAAQTLEA +T +LN IR+ T KVC
Sbjct: 711  RLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVC 770

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPHF R SKT
Sbjct: 771  MKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKT 830

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFY+GLTATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSIHYD
Sbjct: 831  PAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYD 890

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
            +TVRN+SG ++QF YGDDGMDPA MEGK+G PLN DRL +K+KATCP      L    ++
Sbjct: 891  NTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIM 950

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            +++  +L++HD  P G CS+AFKKSL  F   +   +    +L+    +      S  LE
Sbjct: 951  QMLEEQLAKHD--PAGVCSEAFKKSLKGFLKSQTNELDRVMKLVNNCAQ-----KSEILE 1003

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
            KV   ISG++ +QL+VF+ TCI+RY  K                 EPGTQMTLKTFHFAG
Sbjct: 1004 KVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1063

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMNIT GVPRIKEIIN AK ISTP+ITA LE D++   A+IVKG
Sbjct: 1064 VASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKG 1109


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  619 bits (1595), Expect = e-174
 Identities = 312/466 (66%), Positives = 365/466 (78%)
 Frame = +1

Query: 1    GQLGKATLGNGNKDGLFSVLLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPRG 180
            GQLGKATLGNGNKDGL+SVLLRDY AHA + CMNRLAKLSARWIGNHGFSIGIDDVQP+ 
Sbjct: 658  GQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKK 717

Query: 181  NLNREKKYSIEKGYEACDKLIQSYDKGQLKLQPGCDAAQTLEAEITGVLNGIREATAKVC 360
             L+ +K   I + YE C+  I+ Y++G+L+L+PGCDAAQTLEA IT +LN IRE   K C
Sbjct: 718  ELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKAC 777

Query: 361  MDELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKT 540
            M  L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK+K 
Sbjct: 778  MGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKE 837

Query: 541  PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 720
            PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD
Sbjct: 838  PAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYD 897

Query: 721  DTVRNSSGGVIQFHYGDDGMDPAQMEGKNGVPLNLDRLYLKIKATCPSSTHANLSPSEVL 900
            ++VRN+ G ++QF YGDDGMDPA MEGK+G PLN DRL +K+KATCP +    LSP +V 
Sbjct: 898  NSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVS 957

Query: 901  EIVNNRLSRHDMTPEGGCSDAFKKSLLDFFHKRITTMKNTRRLLQLDEEHVDKNNSVFLE 1080
            EIV  +L+ +    +  CS+AF  SL  FF  +        + ++  E+    + S  LE
Sbjct: 958  EIVEKQLAAYG---KESCSEAFLNSLRKFFEGQ---QDKLDKKIKFVEDIGWDDKSQILE 1011

Query: 1081 KVAANISGVTSQQLQVFLETCITRYHLKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 1260
            +V    SG+T +QL+VF++TC +RYH+K+                EPGTQMTLKTFHFAG
Sbjct: 1012 EVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1071

Query: 1261 VASMNITLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKG 1398
            VASMNIT GVPRIKEIINGAK ISTPIITA LEC+++  +AR+VKG
Sbjct: 1072 VASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKG 1117