BLASTX nr result
ID: Akebia24_contig00006623
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00006623
(494 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ri... 119 4e-25
ref|XP_006444727.1| hypothetical protein CICLE_v10021531mg [Citr... 114 1e-23
ref|XP_006444725.1| hypothetical protein CICLE_v10021531mg [Citr... 114 1e-23
ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 114 1e-23
ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 114 1e-23
gb|AFK45924.1| unknown [Lotus japonicus] 106 3e-21
ref|XP_002320231.2| hypothetical protein POPTR_0014s10140g [Popu... 105 8e-21
ref|XP_006837862.1| hypothetical protein AMTR_s00100p00087410 [A... 103 2e-20
dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare] 103 3e-20
ref|XP_004306614.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 102 7e-20
gb|EMS46474.1| 28 kDa ribonucleoprotein, chloroplastic [Triticum... 101 1e-19
ref|XP_006418378.1| hypothetical protein EUTSA_v10008355mg [Eutr... 100 2e-19
gb|EXC13668.1| 33 kDa ribonucleoprotein [Morus notabilis] 100 4e-19
ref|NP_171616.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 100 4e-19
ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp.... 99 5e-19
ref|XP_006305480.1| hypothetical protein CARUB_v10009913mg [Caps... 97 2e-18
ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group] g... 96 4e-18
ref|NP_001030925.1| RNA-binding (RRM/RBD/RNP motifs) family prot... 95 9e-18
ref|XP_003528766.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 95 9e-18
ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 95 1e-17
>ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 281
Score = 119 bits (298), Expect = 4e-25
Identities = 57/80 (71%), Positives = 64/80 (80%)
Frame = +2
Query: 254 DEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCG 433
+ED L + K + RPCELYVCNLPR+C I EL+E+FKPYGTV SVEVSRN ETGISRGCG
Sbjct: 83 EEDELGRQLKKQPRPCELYVCNLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCG 142
Query: 434 YVTMSLINEAKAAITTLDGS 493
+VTM IN AK AI LDGS
Sbjct: 143 FVTMGSINSAKNAIAALDGS 162
>ref|XP_006444727.1| hypothetical protein CICLE_v10021531mg [Citrus clementina]
gi|557546989|gb|ESR57967.1| hypothetical protein
CICLE_v10021531mg [Citrus clementina]
Length = 267
Score = 114 bits (286), Expect = 1e-23
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +2
Query: 254 DEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCG 433
D+D+ + ++R RPCELYVCNLPR+ I ELLEMFKP+GTV SVEVSRN ETGISRGCG
Sbjct: 85 DDDSSVEEPRSRARPCELYVCNLPRSFDISELLEMFKPFGTVLSVEVSRNPETGISRGCG 144
Query: 434 YVTMSLINEAKAAITTLDGS 493
Y+TM IN AK AI LDGS
Sbjct: 145 YLTMGSINSAKNAIIALDGS 164
>ref|XP_006444725.1| hypothetical protein CICLE_v10021531mg [Citrus clementina]
gi|567904476|ref|XP_006444726.1| hypothetical protein
CICLE_v10021531mg [Citrus clementina]
gi|568876610|ref|XP_006491370.1| PREDICTED: 31 kDa
ribonucleoprotein, chloroplastic-like isoform X1 [Citrus
sinensis] gi|557546987|gb|ESR57965.1| hypothetical
protein CICLE_v10021531mg [Citrus clementina]
gi|557546988|gb|ESR57966.1| hypothetical protein
CICLE_v10021531mg [Citrus clementina]
Length = 284
Score = 114 bits (286), Expect = 1e-23
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +2
Query: 254 DEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCG 433
D+D+ + ++R RPCELYVCNLPR+ I ELLEMFKP+GTV SVEVSRN ETGISRGCG
Sbjct: 85 DDDSSVEEPRSRARPCELYVCNLPRSFDISELLEMFKPFGTVLSVEVSRNPETGISRGCG 144
Query: 434 YVTMSLINEAKAAITTLDGS 493
Y+TM IN AK AI LDGS
Sbjct: 145 YLTMGSINSAKNAIIALDGS 164
>ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 114 bits (285), Expect = 1e-23
Identities = 59/93 (63%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = +2
Query: 218 IARSAPVEVANDDEDNLSKLS-KARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEV 394
+ A VE E +LS K RPCELYVCNLPR+C I EL+EMFKPYGTV + EV
Sbjct: 72 LTEEAIVEGDVKSEGSLSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEV 131
Query: 395 SRNAETGISRGCGYVTMSLINEAKAAITTLDGS 493
SRN ETGIS+GCGYVTM IN AK +IT LDGS
Sbjct: 132 SRNPETGISKGCGYVTMGSINSAKVSITALDGS 164
>ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 286
Score = 114 bits (285), Expect = 1e-23
Identities = 59/93 (63%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = +2
Query: 218 IARSAPVEVANDDEDNLSKLS-KARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEV 394
+ A VE E +LS K RPCELYVCNLPR+C I EL+EMFKPYGTV + EV
Sbjct: 74 LTEEAIVEGDVKSEGSLSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEV 133
Query: 395 SRNAETGISRGCGYVTMSLINEAKAAITTLDGS 493
SRN ETGIS+GCGYVTM IN AK +IT LDGS
Sbjct: 134 SRNPETGISKGCGYVTMGSINSAKVSITALDGS 166
>gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 106 bits (265), Expect = 3e-21
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +2
Query: 239 EVANDDEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGI 418
+V ++E+ + PCE+YVCNLPR+C LL++FKPYGT+ SVEVSRNAETG
Sbjct: 82 DVFKNEEEEQQPPQRRPRGPCEIYVCNLPRSCNAAHLLDLFKPYGTIISVEVSRNAETGE 141
Query: 419 SRGCGYVTMSLINEAKAAITTLDGS 493
SRGCGYV M IN AK+AI LDGS
Sbjct: 142 SRGCGYVIMESINSAKSAIAALDGS 166
>ref|XP_002320231.2| hypothetical protein POPTR_0014s10140g [Populus trichocarpa]
gi|550323885|gb|EEE98546.2| hypothetical protein
POPTR_0014s10140g [Populus trichocarpa]
Length = 287
Score = 105 bits (261), Expect = 8e-21
Identities = 46/74 (62%), Positives = 60/74 (81%)
Frame = +2
Query: 272 KLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSL 451
+L K + +PCELYVCNLPR+ I +L+EMFKP+G+V SVEVSRN ETG+SRGCGY+TM
Sbjct: 92 ELKKKQAKPCELYVCNLPRSSDIADLVEMFKPFGSVLSVEVSRNPETGVSRGCGYITMGS 151
Query: 452 INEAKAAITTLDGS 493
+ A+ A++ LDGS
Sbjct: 152 VESARNAVSALDGS 165
>ref|XP_006837862.1| hypothetical protein AMTR_s00100p00087410 [Amborella trichopoda]
gi|548840231|gb|ERN00431.1| hypothetical protein
AMTR_s00100p00087410 [Amborella trichopoda]
Length = 289
Score = 103 bits (257), Expect = 2e-20
Identities = 49/89 (55%), Positives = 65/89 (73%)
Frame = +2
Query: 227 SAPVEVANDDEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNA 406
++P+ DE+ + K RPC+LY CNLPR+C I +L E+F+P+GTV +VEVSRN
Sbjct: 81 ASPIVEEVIDENGENHSPKYEVRPCKLYACNLPRSCDIAQLSEIFQPFGTVLAVEVSRNK 140
Query: 407 ETGISRGCGYVTMSLINEAKAAITTLDGS 493
ETG SRGCGYVTM+ + EAK+ I +LDGS
Sbjct: 141 ETGESRGCGYVTMNSLAEAKSTIASLDGS 169
>dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 103 bits (256), Expect = 3e-20
Identities = 49/70 (70%), Positives = 57/70 (81%)
Frame = +2
Query: 281 KARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLINE 460
+ R RP EL+VCNLPR CG+ ELLE+F PYGTV SVEVSR+AETGISRGCG+VTM + E
Sbjct: 122 RRRPRPRELFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFVTMRSLAE 181
Query: 461 AKAAITTLDG 490
A+ AI LDG
Sbjct: 182 ARTAINALDG 191
>ref|XP_004306614.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 293
Score = 102 bits (253), Expect = 7e-20
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Frame = +2
Query: 248 NDD----EDNLSKLSKART-RPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAET 412
NDD E+ L + R RPCELYVCNLPR+ I +L+EMFKP+GTV SVEV R+ ET
Sbjct: 89 NDDDVSGEEGLEMEKQNRQPRPCELYVCNLPRSSDIEDLMEMFKPHGTVFSVEVCRSPET 148
Query: 413 GISRGCGYVTMSLINEAKAAITTLDG 490
G+SRGCGYVTM I+ AKAAI LDG
Sbjct: 149 GLSRGCGYVTMGSIDSAKAAIAALDG 174
>gb|EMS46474.1| 28 kDa ribonucleoprotein, chloroplastic [Triticum urartu]
Length = 309
Score = 101 bits (251), Expect = 1e-19
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = +2
Query: 278 SKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLIN 457
++ + RP E++VCNLPR CG+ ELLE+F PYGTV SVEVSR+AETGISRGCG+VTM +
Sbjct: 135 TRRQPRPREMFVCNLPRRCGVDELLELFGPYGTVLSVEVSRDAETGISRGCGFVTMRSLA 194
Query: 458 EAKAAITTLDG 490
EA+ AI LDG
Sbjct: 195 EARTAINALDG 205
>ref|XP_006418378.1| hypothetical protein EUTSA_v10008355mg [Eutrema salsugineum]
gi|567156511|ref|XP_006418379.1| hypothetical protein
EUTSA_v10008355mg [Eutrema salsugineum]
gi|557096149|gb|ESQ36731.1| hypothetical protein
EUTSA_v10008355mg [Eutrema salsugineum]
gi|557096150|gb|ESQ36732.1| hypothetical protein
EUTSA_v10008355mg [Eutrema salsugineum]
Length = 292
Score = 100 bits (249), Expect = 2e-19
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +2
Query: 254 DEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCG 433
+E + + RPCELYVCN+PR+ I +LLEMF+P+GTV SVEVSRN ETG SRG G
Sbjct: 92 EETEAEPVVMKKPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPETGESRGSG 151
Query: 434 YVTMSLINEAKAAITTLDGS 493
YVTM IN AK AI +LDG+
Sbjct: 152 YVTMGSINSAKIAIASLDGT 171
>gb|EXC13668.1| 33 kDa ribonucleoprotein [Morus notabilis]
Length = 296
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/71 (66%), Positives = 56/71 (78%)
Frame = +2
Query: 281 KARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLINE 460
K+R RPCELYVCNLPR+C + EL +MFK +GTV S+E+SRN ETGISRG GYV + +
Sbjct: 101 KSRPRPCELYVCNLPRSCDVPELAQMFKCFGTVFSIEISRNPETGISRGSGYVIVDSMEA 160
Query: 461 AKAAITTLDGS 493
AKAAI LDGS
Sbjct: 161 AKAAIIALDGS 171
>ref|NP_171616.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|16930401|gb|AAL31886.1|AF419554_1
At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative
[Arabidopsis thaliana] gi|22135777|gb|AAM91045.1|
At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 293
Score = 99.8 bits (247), Expect = 4e-19
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Frame = +2
Query: 116 HKAFACAVLRLPIKTKISNSSVLAVTXXXXXXXQIARSAPVEVANDDEDNLSKLSKA--- 286
H + + + P++ K+S+S + + + P N D S +SKA
Sbjct: 51 HSSLSRPFVAQPLQIKVSSSELSVLDEEKEEEVVKGEAEP----NKD----SVVSKAEPV 102
Query: 287 -RTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLINEA 463
+ RPCELYVCN+PR+ I +LL+MF+P+GTV SVEVSRN +TG SRG GYVTM IN A
Sbjct: 103 KKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSA 162
Query: 464 KAAITTLDGS 493
K AI +LDG+
Sbjct: 163 KIAIASLDGT 172
>ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 99.4 bits (246), Expect = 5e-19
Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Frame = +2
Query: 143 RLPIKTKISNSSVLAVTXXXXXXXQIARSAPVEVANDDEDNLSKLSKA----RTRPCELY 310
+L IK S SVL ++ V+ + + S +S+A + RPCELY
Sbjct: 61 QLQIKVSSSELSVL----DEEEEEEVKGEGEVKTGEGETNGDSVVSEAEPVKKPRPCELY 116
Query: 311 VCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLINEAKAAITTLDG 490
VCN+PR+ I +LL+MF+P+GTV SVEVSRN +TG SRG GYVTM IN AK AI +LDG
Sbjct: 117 VCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASLDG 176
Query: 491 S 493
+
Sbjct: 177 T 177
>ref|XP_006305480.1| hypothetical protein CARUB_v10009913mg [Capsella rubella]
gi|482574191|gb|EOA38378.1| hypothetical protein
CARUB_v10009913mg [Capsella rubella]
Length = 290
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/113 (45%), Positives = 69/113 (61%)
Frame = +2
Query: 149 PIKTKISNSSVLAVTXXXXXXXQIARSAPVEVANDDEDNLSKLSKARTRPCELYVCNLPR 328
P++ K+S+S + V + + ++ + RPCELYVCN+PR
Sbjct: 57 PLEIKVSSSDLSVVDEVKEEGEVTTGQGETDGGDAVISEAEPVAVKKQRPCELYVCNIPR 116
Query: 329 NCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLINEAKAAITTLD 487
+ I +LLEMF+P+GTV SVEVSRN +TG SRG GYVTM+ IN AK AI +LD
Sbjct: 117 SYDIGQLLEMFQPFGTVISVEVSRNPQTGESRGSGYVTMASINSAKIAIASLD 169
>ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein
RNP-D precursor [Oryza sativa Japonica Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa
Japonica Group] gi|125559951|gb|EAZ05399.1| hypothetical
protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 319
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = +2
Query: 287 RTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGYVTMSLINEAK 466
R+RP EL+VCNLPR C + +L E+FKPYGTV SVE+SR+ ETG+SRGCG+VTM + EA+
Sbjct: 130 RSRPRELFVCNLPRRCDVDDLYELFKPYGTVLSVEISRDPETGLSRGCGFVTMRSLPEAR 189
Query: 467 AAITTLDG 490
A+ LDG
Sbjct: 190 TAMNALDG 197
>ref|NP_001030925.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|332189111|gb|AEE27232.1| RNA-binding
(RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 294
Score = 95.1 bits (235), Expect = 9e-18
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 5/131 (3%)
Frame = +2
Query: 116 HKAFACAVLRLPIKTKISNSSVLAVTXXXXXXXQIARSAPVEVANDDEDNLSKLSKA--- 286
H + + + P++ K+S+S + + + P N D S +SKA
Sbjct: 51 HSSLSRPFVAQPLQIKVSSSELSVLDEEKEEEVVKGEAEP----NKD----SVVSKAEPV 102
Query: 287 -RTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVE-VSRNAETGISRGCGYVTMSLINE 460
+ RPCELYVCN+PR+ I +LL+MF+P+GTV SVE VSRN +TG SRG GYVTM IN
Sbjct: 103 KKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSINS 162
Query: 461 AKAAITTLDGS 493
AK AI +LDG+
Sbjct: 163 AKIAIASLDGT 173
>ref|XP_003528766.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 277
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = +2
Query: 239 EVANDDEDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGI 418
+V D+E+ +L KA CE+YVCNLPR C LL+MF+PYGT+ SVEV R+AET
Sbjct: 77 DVLEDEEERDKRLGKA----CEVYVCNLPRRCDATYLLDMFRPYGTILSVEVCRDAETNE 132
Query: 419 SRGCGYVTMSLINEAKAAITTLDGS 493
S+GCGYVT+ I A+ A+ LDGS
Sbjct: 133 SKGCGYVTLGSIYSARNAVAALDGS 157
>ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = +2
Query: 257 EDNLSKLSKARTRPCELYVCNLPRNCGILELLEMFKPYGTVQSVEVSRNAETGISRGCGY 436
E + S ++ RP EL+VCNLPR CG+ +LL +F+PYGTV SVEVSR+ ETGISRGCG+
Sbjct: 87 EGDSSGWTQRSPRPRELFVCNLPRRCGVDDLLHLFQPYGTVLSVEVSRDPETGISRGCGF 146
Query: 437 VTMSLINEAKAAITTLDG 490
VTM + A+ A+ LDG
Sbjct: 147 VTMRSLAAARTAMNALDG 164