BLASTX nr result
ID: Akebia24_contig00006363
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00006363
(844 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 253 5e-65
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 253 5e-65
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 245 2e-62
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 245 2e-62
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 245 2e-62
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 245 2e-62
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 238 3e-60
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 234 2e-59
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 234 2e-59
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 231 2e-58
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 229 1e-57
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 228 2e-57
emb|CBI16834.3| unnamed protein product [Vitis vinifera] 228 2e-57
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 215 2e-53
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 210 6e-52
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 208 2e-51
ref|XP_002312652.1| RNA recognition motif-containing family prot... 198 2e-48
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 176 1e-41
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A... 169 9e-40
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 161 3e-37
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 253 bits (647), Expect = 5e-65
Identities = 136/257 (52%), Positives = 172/257 (66%), Gaps = 22/257 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 489
LQRSE P GG+ S G+Q Q+ + P + E G SQ +NIPGV V+ N+ A P+Q
Sbjct: 61 LQRSEAPPQPGGMGSTGLQAQKNEAPEPRG-EAGGSQGLNIPGVSVQGKHLNVTARYPEQ 119
Query: 490 -----------AKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 612
G + KG V+E ++ QV+ GF+ + K+G+DP+ +
Sbjct: 120 DGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179
Query: 613 GKFLSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 792
K + + ++GTG P+ A +P N+ GLN+N PM++EN RP +ENG TMLFVGELH
Sbjct: 180 QKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVGELH 239
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 240 WWTTDAELESVLSQYGR 256
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 253 bits (647), Expect = 5e-65
Identities = 143/255 (56%), Positives = 170/255 (66%), Gaps = 23/255 (9%)
Frame = +1
Query: 148 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 324
MAEEQLDY DEEYG QKM +Q GGAISALAD++LMGEDDEYDDLYNDVN+GEGFLQ+ R
Sbjct: 1 MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60
Query: 325 SEPVSLGGVESGG-VQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSN----IRATVPD 486
SE + GV +GG Q +TD P K E G SQ + IPGV +E SN + P
Sbjct: 61 SEAPAPSGVMAGGPFQAHKTDVPPQKL-EAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPM 119
Query: 487 QAKG--------------GFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFL 624
KG KG VLEM + QV GF+ S P+P K G +P+ + GK
Sbjct: 120 AVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIA 179
Query: 625 SGSSPLSDAGTGAPRVATQIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWW 798
+ S+P+ ++GTG PR Q+ N+ G+ N+NRPMVNEN RP V+NGATMLFVGELHWW
Sbjct: 180 NESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWW 239
Query: 799 TTDAELESVLSQYGR 843
TTDAELESVLSQYGR
Sbjct: 240 TTDAELESVLSQYGR 254
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 245 bits (625), Expect = 2e-62
Identities = 132/257 (51%), Positives = 169/257 (65%), Gaps = 22/257 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 489
LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119
Query: 490 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 612
+ G + KGSV E + QV+ GF+ K+G+DP+ +
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 613 GKFLSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 792
K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 240 WWTTDAELESVLSQYGR 256
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 245 bits (625), Expect = 2e-62
Identities = 132/257 (51%), Positives = 169/257 (65%), Gaps = 22/257 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 489
LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119
Query: 490 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 612
+ G + KGSV E + QV+ GF+ K+G+DP+ +
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 613 GKFLSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 792
K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 240 WWTTDAELESVLSQYGR 256
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 245 bits (625), Expect = 2e-62
Identities = 132/257 (51%), Positives = 169/257 (65%), Gaps = 22/257 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 489
LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119
Query: 490 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 612
+ G + KGSV E + QV+ GF+ K+G+DP+ +
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 613 GKFLSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 792
K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 240 WWTTDAELESVLSQYGR 256
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 245 bits (625), Expect = 2e-62
Identities = 132/257 (51%), Positives = 169/257 (65%), Gaps = 22/257 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+D+GDEEYG QKMQYQ GAI ALADE++MGEDDEYDDLYNDVN+GEGFLQ
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 489
LQRSE P+ GG+ S G++ Q + P + E G SQ +NIPGV V+ N+ A P++
Sbjct: 61 LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119
Query: 490 AK-----------GGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 612
+ G + KGSV E + QV+ GF+ K+G+DP+ +
Sbjct: 120 EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179
Query: 613 GKFLSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMVNENMSRPVVENGATMLFVGELH 792
K + + ++GTG P+ +P N+ G N+N P++NEN +P +ENG TMLFVGELH
Sbjct: 180 QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELH 239
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 240 WWTTDAELESVLSQYGR 256
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 238 bits (606), Expect = 3e-60
Identities = 135/260 (51%), Positives = 166/260 (63%), Gaps = 25/260 (9%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+DY +EEYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------R 453
Q+ E P GV +G +Q ++TD P + + G SQ N+PGV VE +
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119
Query: 454 NDSNIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQI 609
ND + P+ G + KGSV E + V GF+ S PP+ GVDP+ +
Sbjct: 120 NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNM 179
Query: 610 SGKFLSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVG 783
G+ + +P+ + G P+ A IP N+ G+NIN R MVNEN RP +ENG TMLFVG
Sbjct: 180 PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVG 238
Query: 784 ELHWWTTDAELESVLSQYGR 843
ELHWWTTDAELESVLSQYGR
Sbjct: 239 ELHWWTTDAELESVLSQYGR 258
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 234 bits (598), Expect = 2e-59
Identities = 134/260 (51%), Positives = 165/260 (63%), Gaps = 25/260 (9%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MD MAEEQ+DY +EEYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ
Sbjct: 1 MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------R 453
Q+ E P GV +G +Q ++TD P + + G SQ N+PGV VE +
Sbjct: 61 FQQPEAPPPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQ 119
Query: 454 NDSNIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQI 609
ND + P+ G + KGSV E + V GF+ S P + GVDP+ +
Sbjct: 120 NDVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNM 179
Query: 610 SGKFLSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVG 783
G+ + +P+ + G P+ A IP N+ G+NIN R MVNEN RP +ENG TMLFVG
Sbjct: 180 PGRVANEPAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVG 238
Query: 784 ELHWWTTDAELESVLSQYGR 843
ELHWWTTDAELESVLSQYGR
Sbjct: 239 ELHWWTTDAELESVLSQYGR 258
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 234 bits (598), Expect = 2e-59
Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 13/248 (5%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MDPM EEQ+DY +EEYG QK+QYQ GAI ALADE+ M EDDEYDDLYNDVN+GEGFLQ
Sbjct: 1 MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60
Query: 316 LQRSEP-VSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPG---------VVERNDSN 465
+ R EP + GV +GG+Q Q+ + P + + GASQ+V PG V E+ D
Sbjct: 61 MHRPEPPLPPAGVGNGGLQAQKNNVPEQRV-QGGASQEVKNPGFSVEGKYSSVPEQKDQP 119
Query: 466 IRATVPDQAKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGSSPLS 645
+ VP+ A KG V+EM + QV GF+ +A M + D + ++GK +G P
Sbjct: 120 PVSVVPEMASQ--KGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSM 177
Query: 646 DAGTGAPRVATQIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWWTTDAELE 819
++G+ P Q+P N+ + N+NRPMVNEN RP VENG+ LFVGELHWWTTDAELE
Sbjct: 178 NSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELE 237
Query: 820 SVLSQYGR 843
VLSQ+GR
Sbjct: 238 GVLSQFGR 245
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 231 bits (590), Expect = 2e-58
Identities = 132/237 (55%), Positives = 163/237 (68%), Gaps = 5/237 (2%)
Frame = +1
Query: 148 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 324
MAEEQ+DY DEEYG QK+QYQ GAISALADE+ M EDDEYDDLYNDVN+ EGFLQ+ R
Sbjct: 1 MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60
Query: 325 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQAKG 498
SE P+ GGV +GG+Q Q+TD ++ + G SQ+ IPGV V+ S+ A P+Q
Sbjct: 61 SEAPLPPGGVGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQQ-- 117
Query: 499 GFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGSSPLSDAGTGAPRVAT 678
+A+E ++ +TG+ S MPP +G D + I+GK S P ++GT P T
Sbjct: 118 ----GQPPVAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTAGPTGVT 172
Query: 679 QIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELHWWTTDAELESVLSQYGR 843
Q+P N+ + N NRPM NEN RP VENG+TMLFVGELHWWTTDAELESVLSQYGR
Sbjct: 173 QMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVLSQYGR 229
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 229 bits (584), Expect = 1e-57
Identities = 131/257 (50%), Positives = 163/257 (63%), Gaps = 25/257 (9%)
Frame = +1
Query: 148 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 324
MAEEQ+DY ++EYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYNDVN+G+G LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60
Query: 325 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------RNDS 462
E P GV +G +Q ++TD P + + G SQ NIPGV VE +ND
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDV 119
Query: 463 NIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGK 618
+ P+ G + KGSV E + V GF+ S P + GVDP+ + G+
Sbjct: 120 QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179
Query: 619 FLSGSSPLSDAGTGAPRVATQIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELH 792
+ +P+ + G P+ A IP N+ G+ N+NR MVNEN RP +ENG TMLFVGELH
Sbjct: 180 VANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELH 238
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 239 WWTTDAELESVLSQYGR 255
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 228 bits (582), Expect = 2e-57
Identities = 130/257 (50%), Positives = 163/257 (63%), Gaps = 25/257 (9%)
Frame = +1
Query: 148 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 324
MAEEQ+DY ++EYG QKMQYQ GGAI ALADE+LMGEDDEYDDLYND+N+G+G LQ Q+
Sbjct: 1 MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60
Query: 325 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VE------------RNDS 462
E P GV +G +Q ++TD P + + G SQ NIPGV VE +ND
Sbjct: 61 PEAPPPSAGVGNGRLQVKKTDVPEQRV-QVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDV 119
Query: 463 NIRATVPDQAKGGF--------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGK 618
+ P+ G + KGSV E + V GF+ S P + GVDP+ + G+
Sbjct: 120 QVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGR 179
Query: 619 FLSGSSPLSDAGTGAPRVATQIPINRPGL--NINRPMVNENMSRPVVENGATMLFVGELH 792
+ +P+ + G P+ A IP N+ G+ N+NR MVNEN RP +ENG TMLFVGELH
Sbjct: 180 AANEPAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELH 238
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAELESVLSQYGR
Sbjct: 239 WWTTDAELESVLSQYGR 255
>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
Length = 491
Score = 228 bits (581), Expect = 2e-57
Identities = 124/237 (52%), Positives = 153/237 (64%), Gaps = 22/237 (9%)
Frame = +1
Query: 199 MQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQRSEPVSLGGVESGG-VQTQ 375
M +Q GGAISALAD++LMGEDDEYDDLYNDVN+GEGFLQ+ RSE + GV +GG Q
Sbjct: 1 MPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAPAPSGVMAGGPFQAH 60
Query: 376 ETDGPGSKAPEHGASQDVNIPGVV-----------ERNDSNIRATVPDQAKGGF------ 504
+TD P K E G SQ + IPGV E+ + + P+
Sbjct: 61 KTDVPPQKL-EAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGPEMGSTSHLDGPSV 119
Query: 505 --KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGSSPLSDAGTGAPRVAT 678
KG VLEM + QV GF+ S P+P K G +P+ + GK + S+P+ ++GTG PR
Sbjct: 120 SQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVP 179
Query: 679 QIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVGELHWWTTDAELESVLSQYGR 843
Q+ N+ G+N+N RPMVNEN RP V+NGATMLFVGELHWWTTDAELESVLSQYGR
Sbjct: 180 QMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGR 236
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 215 bits (547), Expect = 2e-53
Identities = 123/256 (48%), Positives = 155/256 (60%), Gaps = 22/256 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MDP A+EQLDYGDEEYG + KMQY G I ALA++++MGEDDEYDDLYNDVNIGEGFLQ
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60
Query: 316 LQRSE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV-VERNDSNIRATVPDQ 489
LQRSE PV +G Q Q+ P S+A G S++ IPG+ E + P Q
Sbjct: 61 LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQ 119
Query: 490 ---------------AKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFL 624
A + S + M Q +G++ S PMP KIG DP + K
Sbjct: 120 KGEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNA 179
Query: 625 SGSSPLSDAGTGAPRVATQIPINR----PGLNINRPMVNENMSRPVVENGATMLFVGELH 792
S ++PL ++ PRV +P N+ +N+N P+++E RP +ENG TMLFVGELH
Sbjct: 180 SEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELH 239
Query: 793 WWTTDAELESVLSQYG 840
WWTTDAELESVL+QYG
Sbjct: 240 WWTTDAELESVLTQYG 255
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein,
putative [Ricinus communis]
Length = 644
Score = 210 bits (534), Expect = 6e-52
Identities = 123/250 (49%), Positives = 157/250 (62%), Gaps = 19/250 (7%)
Frame = +1
Query: 148 MAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQR 324
MA+EQ+DY DEEYG QK+QYQ GAI ALA+E+ MGEDDEYDDLYNDVNIGE FLQ+ R
Sbjct: 1 MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHR 59
Query: 325 SE-PVSLGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGVVERNDSNIRATVPDQ-AKG 498
SE P + V +GG Q + ++ E G SQ +NIPGV + + P+Q KG
Sbjct: 60 SEAPPAPPSVGNGGFQPRNSN---DLRVESGGSQGLNIPGVAVESKYSTGTHFPEQNVKG 116
Query: 499 GFKGS--------------VLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGSS 636
GS V+EM + Q GF+ S P IGVDP+ ++ K + +
Sbjct: 117 PEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPT 176
Query: 637 PLSDAGTGAPRVATQIPINRPGLNI--NRPMVNENMSRPVVENGATMLFVGELHWWTTDA 810
P+ +A G PRV Q+P ++ +N+ NR NEN RP +ENG+TML+VGELHWWTTDA
Sbjct: 177 PVPNA--GVPRVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDA 234
Query: 811 ELESVLSQYG 840
ELE+VLSQYG
Sbjct: 235 ELENVLSQYG 244
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 208 bits (529), Expect = 2e-51
Identities = 126/259 (48%), Positives = 153/259 (59%), Gaps = 27/259 (10%)
Frame = +1
Query: 148 MAEEQLDYGDEEYG-TQKMQYQ-SGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQ 321
MAE+ +D+ DEEYG QK QYQ SGGAISALADE+LMG+DDEYDDLYNDVN+GEGFLQLQ
Sbjct: 1 MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60
Query: 322 RSEPVSLGGVES--GGVQTQETDGPGSKAPEHGASQDVNIPGV----------------- 444
RSE SL G+Q Q+ + P + E G SQ NIPGV
Sbjct: 61 RSEAPSLPAAAGVGNGLQAQKRNFPEPRE-EIGGSQQPNIPGVSAEGRFSSAGSQFPGQQ 119
Query: 445 ----VERNDSNIRATVPDQAKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQIS 612
V++ PD A G KG ++ GF+ S PM +GVD + I
Sbjct: 120 DGLKVDKKSEAGSMVYPDGASGSQKGRIV----------AGFQGSKPMLHSVGVDSSDIP 169
Query: 613 GKFLSGSSPLSDAGTGAPRVATQIPINRPGLNIN--RPMVNENMSRPVVENGATMLFVGE 786
GK ++ ++G PR + N+ +N N P+VNEN RP +ENG+TMLFVGE
Sbjct: 170 GKMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGE 229
Query: 787 LHWWTTDAELESVLSQYGR 843
LHWWTTDAELESVLSQYGR
Sbjct: 230 LHWWTTDAELESVLSQYGR 248
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 198 bits (503), Expect = 2e-48
Identities = 118/250 (47%), Positives = 150/250 (60%), Gaps = 23/250 (9%)
Frame = +1
Query: 163 LDYGDEEYGTQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQRSE-PVS 339
+DY +EE KMQYQ GAI ALA+E+ MGEDDEYDDLYNDVN+GE FLQ+ SE P
Sbjct: 1 MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55
Query: 340 LGGVESGGVQTQETDGPGSKAPEHGASQDVNIPG---VVERNDSNIRATVPDQAKGGF-- 504
V +GG QT+ E G SQ + I G VE SN +A P+Q +
Sbjct: 56 PATVGNGGFQTRNAH---ESRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAV 112
Query: 505 ---------------KGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGSSP 639
KG V+EM+ ++QV GF+ S P+PP IGVDP+ +S K P
Sbjct: 113 EAQDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEP 172
Query: 640 LSDAGTGAPRVATQIPINRPGLN--INRPMVNENMSRPVVENGATMLFVGELHWWTTDAE 813
L G+ PR A Q+ +N+ ++ +NRP+VNEN RP +ENG+T L+VGELHWWTTDAE
Sbjct: 173 LPITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAE 232
Query: 814 LESVLSQYGR 843
LES SQ+GR
Sbjct: 233 LESFASQFGR 242
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 176 bits (446), Expect = 1e-41
Identities = 110/257 (42%), Positives = 144/257 (56%), Gaps = 22/257 (8%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYG-TQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MDP+ +EQLDYGDEEYG QKMQY GGAI ALA+++++G+DDEYDDLYNDVN+GEGF+Q
Sbjct: 1 MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60
Query: 316 LQRSEPVSLGGVESGGVQTQETDGPGSKAPEHGASQDVN----------IPGVVERNDSN 465
+QRSE V + + PG++A E ASQ+VN P V+ +D
Sbjct: 61 MQRSEAPPPSAVGNNSFSISKNTAPGTRA-EAIASQEVNNGRVGNEGSYAPNGVQLSDQK 119
Query: 466 IRATV---PDQ-AKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGS 633
T P Q + + E+A Q G++ S M K D S +
Sbjct: 120 NNLTAVGGPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEP 179
Query: 634 SPLSDAGTGAPRVATQIPIN------RPGLNINRPMVNENMSRPV-VENGATMLFVGELH 792
+ L TG+ + Q P N +N+NR M +E + RP ENG M++VGELH
Sbjct: 180 ASLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELH 239
Query: 793 WWTTDAELESVLSQYGR 843
WWTTDAE+ESVL QYGR
Sbjct: 240 WWTTDAEVESVLIQYGR 256
>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
gi|548855834|gb|ERN13697.1| hypothetical protein
AMTR_s00049p00146760 [Amborella trichopoda]
Length = 659
Score = 169 bits (429), Expect = 9e-40
Identities = 123/280 (43%), Positives = 149/280 (53%), Gaps = 45/280 (16%)
Frame = +1
Query: 139 MDPMAEEQLDYGDEEYGT-QKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQ 315
MDPMAEEQLDY DE+YG QKM +Q+GGAISALADE+LMGEDDEYDDLYNDVN+G+GF+Q
Sbjct: 1 MDPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQ 60
Query: 316 -LQRSEPVSLGGVESGGVQTQETDGPGSKAP--EHGASQDVNIPGVVER----------- 453
LQ EPV E+ G G +AP E ++ VNIPGV
Sbjct: 61 SLQHQEPVQ-----------YESMGNGVQAPKEEPISTPPVNIPGVGHEEKGEKDAKLSG 109
Query: 454 -NDSNIRATVPDQ-------AKGGFKGSVLEMAREIQVETTGFRDSAPMPPKIG------ 591
+D + + +Q A G K V E E Q + +GFR +AP PP G
Sbjct: 110 FSDLDQKKAFQEQASNQLAGASSGLKIRVSEPVSEPQPQASGFR-NAPAPPAKGSGFNTA 168
Query: 592 --VDPN----QISGKFLSGSSPLSDAGTGAPRVATQIPINRPGLNINRPMV--------- 726
+D N Q S + P G GA A + PG N ++
Sbjct: 169 GAMDANKQLAQTSSNAVPRVGPGPGPGIGAGPNANMNRMMGPGPNQAGAVIDTSARFGSE 228
Query: 727 -NENMSRPVVENGATMLFVGELHWWTTDAELESVLSQYGR 843
+ +S E+G TMLFVGEL WWTTDAELESVLSQYGR
Sbjct: 229 NSNRLSHGGGESGNTMLFVGELQWWTTDAELESVLSQYGR 268
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 161 bits (407), Expect = 3e-37
Identities = 101/233 (43%), Positives = 126/233 (54%), Gaps = 6/233 (2%)
Frame = +1
Query: 163 LDYGDEEYGTQKMQYQSGGAISALADEDLMGEDDEYDDLYNDVNIGEGFLQLQRSE-PVS 339
+D+ +EE KMQYQ GAI ALA+E+L GEDDEYDDLYNDVN+GE FLQ+ SE P
Sbjct: 1 MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55
Query: 340 LGGVESGGVQTQETDGPGSKAPEHGASQDVNIPGV---VERNDSNIRATVPDQAKGGFKG 510
+GG QT+ E G SQ + G VE SN A P+Q + G
Sbjct: 56 PATAGNGGFQTRNAH---ESRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAG--- 109
Query: 511 SVLEMAREIQVETTGFRDSAPMPPKIGVDPNQISGKFLSGSSPLSDAGTGAPRVATQIPI 690
IGV+ N + S ++ G+ PR Q+ +
Sbjct: 110 -------------------------IGVEANDVGSIGYGDGSSVAQKGSAGPRGVPQMQV 144
Query: 691 NRPGLN--INRPMVNENMSRPVVENGATMLFVGELHWWTTDAELESVLSQYGR 843
N+ +N +NRP+VNEN RP +ENG T L+VGELHWWTTDAELESV SQYGR
Sbjct: 145 NQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGR 197