BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00005561
         (3481 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]             1075   0.0  
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...  1045   0.0  
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T...  1004   0.0  
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T...   998   0.0  
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T...   998   0.0  
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun...   996   0.0  
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   956   0.0  
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   941   0.0  
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T...   932   0.0  
ref|XP_002320019.2| FF domain-containing family protein [Populus...   919   0.0  
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...   900   0.0  
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   899   0.0  
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   899   0.0  
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   899   0.0  
ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [T...   894   0.0  
ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-l...   892   0.0  
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   885   0.0  
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l...   880   0.0  
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l...   880   0.0  
ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phas...   878   0.0  

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 1075 bits (2779), Expect = 0.0
 Identities = 571/876 (65%), Positives = 642/876 (73%), Gaps = 22/876 (2%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+NPQSSGAQPLRPP VGS G QNFGPP+SMQFRP  P QQ  PF+P+ASQQFRP+GQ 
Sbjct: 1    MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQN 60

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXX 2952
            IS  NVG                   PR  QPG   PSSQ IPMP++             
Sbjct: 61   ISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQP 120

Query: 2951 XXXXN----HMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASG 2784
                     HMPG+ G GMP SSSYTFAP+S+GQ Q+ INAS+Q+Q ISQMHAP     G
Sbjct: 121  NQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAPV---GG 177

Query: 2783 QHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYY 2604
            Q W  +GSQ+   VT V Q+GQQPSVTA ++PA NV PN   QSSSDWQEHTSADGRRYY
Sbjct: 178  QPWLSSGSQSGALVTPVHQAGQQPSVTA-DIPAGNV-PNPTHQSSSDWQEHTSADGRRYY 235

Query: 2603 YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLA 2424
            YNKKTR SSWEKPLELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIP+ELKLA
Sbjct: 236  YNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 295

Query: 2423 REQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2244
            REQAE   +   QSE   TS  P VV VS  E                            
Sbjct: 296  REQAEKSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTISGMTSSPVPVT 355

Query: 2243 XAF-----------DSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENI 2097
                           + +I    SAVT +AVG    +   TPLP              N 
Sbjct: 356  PVVAVVNPPPVVVSGTSAIPIAQSAVTTSAVGVQPSMG--TPLPAAVSGSTGVAAAFINP 413

Query: 2096 HTEDI-------ANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEA 1938
            +   +       A++  GAS+QD+EEAKKG+AVAGK NVTP+EEK +DDEPLVY+ K EA
Sbjct: 414  NATSMTSFENLSADATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEA 473

Query: 1937 KNAFKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEER 1758
            KNAFKALLESANVESD +W+QAM+ IINDKRYGALKTLGERKQAFNEYLGQRKK +AEER
Sbjct: 474  KNAFKALLESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEER 533

Query: 1757 RIKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIEL 1578
            R++QK+AREEFT MLEE +ELTSS +WSKA+ MF+DDER+KAVER RDR+DLFEN+++EL
Sbjct: 534  RMRQKKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMEL 593

Query: 1577 QKKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIF 1398
            QKKER KALE+ KRN +EYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIF
Sbjct: 594  QKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIF 653

Query: 1397 QEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVK 1218
            QEYIRDLE+E+EEQ KIQKE+LRRAERKNRDEFRKLMEEHV  G LTAKTHWRDYCMKVK
Sbjct: 654  QEYIRDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVK 713

Query: 1217 DSPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFK 1038
            DS  Y+AV+SNTSGSTPKDLFEDVAEELEKQYHEDK RIKDA+KL ++T+ASTWT  DFK
Sbjct: 714  DSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFK 773

Query: 1037 ASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASS 858
            A+I D+V SP IS+ NLKLVF+EL              RQ LADDF+DLL S KEITASS
Sbjct: 774  AAILDDVGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASS 833

Query: 857  KWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
             WEDCKPLFE+SQEYRSI ++SF +EIFEEYI  LQ
Sbjct: 834  NWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQ 869



 Score = 64.7 bits (156), Expect = 3e-07
 Identities = 60/262 (22%), Positives = 122/262 (46%), Gaps = 6/262 (2%)
 Frame = -3

Query: 2048 LEEAKKGMAVAGKTN-VTP---MEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSW 1881
            ++++   +AVA  T+  TP    E+   + E   + +K   K+A K  L    + S  ++
Sbjct: 712  VKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMK--LSKVTIASTWTF 769

Query: 1880 EQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESR 1701
                  I++D     +  +   K  F E L + K+ + +E + K++R  ++F  +L   +
Sbjct: 770  GDFKAAILDDVGSPNISDVN-LKLVFEELLDRIKEKEEKEAK-KRQRLADDFNDLLRSKK 827

Query: 1700 ELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEY 1521
            E+T+S+ W     +FE+ + Y+++      +++FE Y+  LQ+K + K   + KR   + 
Sbjct: 828  EITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQEKAKEK---ERKREEEKA 884

Query: 1520 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDL--EKEDEEQMKI 1347
            ++  E  +  K   + RK +DR  + E+     + D  E     +      KED+++ K 
Sbjct: 885  KKEKEREEKEKRKEKERKEKDRDREREKGKERSRKDETESENVDVTGSYGYKEDKKREKD 944

Query: 1346 QKEKLRRAERKNRDEFRKLMEE 1281
            +  K R+  +   D+     EE
Sbjct: 945  KDRKHRKRHQSAVDDASSDKEE 966


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score = 1045 bits (2703), Expect = 0.0
 Identities = 561/870 (64%), Positives = 629/870 (72%), Gaps = 16/870 (1%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+NPQSSGAQPLRPP VGS G QNFGPP+SMQFRP  P QQ  PF+P+ASQQFRP+GQ 
Sbjct: 15   MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQN 74

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXX 2952
            IS  NVG                   PR  QPG   PSSQ IPMP++             
Sbjct: 75   ISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQP 134

Query: 2951 XXXXN----HMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASG 2784
                     HMPG+            FAP+S+GQ Q+ INAS+Q+Q ISQMHAP     G
Sbjct: 135  NQTAPPLNSHMPGL------------FAPASFGQPQSTINASAQFQPISQMHAPV---GG 179

Query: 2783 QHWSMTGSQNALPVTHVQQSGQQPSVTA-ANVPASNVQPNSNTQSSSDWQEHTSADGRRY 2607
            Q W  +GSQ+   VT V Q+GQQPSVTA   V A NV PN   QSSSDWQEHTSADGRRY
Sbjct: 180  QPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNV-PNPTHQSSSDWQEHTSADGRRY 238

Query: 2606 YYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKL 2427
            YYNKKTR SSWEKPLELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIP+ELKL
Sbjct: 239  YYNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKL 298

Query: 2426 AREQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXX 2247
            AREQAE   +   QSE   TS  P VV VS  E                           
Sbjct: 299  AREQAEKSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTISGMTSSPVPV 358

Query: 2246 XXAF-----------DSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGEN 2100
                            + +I    SAVT +AVG    +   TPLP               
Sbjct: 359  TPVVAVVNPPPVVVSGTSAIPIAQSAVTTSAVGVQPSMG--TPLPAAVSG-------STG 409

Query: 2099 IHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKA 1920
            +     A++  GAS+QD+EEAKKG+AVAGK NVTP+EEK +DDEPLVY+ K EAKNAFKA
Sbjct: 410  VAANLSADATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKA 469

Query: 1919 LLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKR 1740
            LLESANVESD +W+QAM+ IINDKRYGALKTLGERKQAFNEYLGQRKK +AEERR++QK+
Sbjct: 470  LLESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKK 529

Query: 1739 AREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERV 1560
            AREEFT MLEE +ELTSS +WSKA+ MF+DDER+KAVER RDR+DLFEN+++ELQKKER 
Sbjct: 530  AREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKERT 589

Query: 1559 KALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRD 1380
            KALE+ KRN +EYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRD
Sbjct: 590  KALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRD 649

Query: 1379 LEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYM 1200
            LE+E+EEQ KIQKE+LRRAERKNRDEFRKLMEEHV  G LTAKTHWRDYCMKVKDS  Y+
Sbjct: 650  LEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYL 709

Query: 1199 AVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDE 1020
            AV+SNTSGSTPKDLFEDVAEELEKQYHEDK RIKDA+KL ++T+ASTWT  DFKA+I D+
Sbjct: 710  AVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDD 769

Query: 1019 VSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCK 840
            V SP IS+ NLKLVF+EL              RQ LADDF+DLL S KEITASS WEDCK
Sbjct: 770  VGSPNISDVNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCK 829

Query: 839  PLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            PLFE+SQEYRSI ++SF +EIFEEYI  LQ
Sbjct: 830  PLFEESQEYRSIGEESFGREIFEEYIAHLQ 859



 Score = 64.7 bits (156), Expect = 3e-07
 Identities = 60/262 (22%), Positives = 122/262 (46%), Gaps = 6/262 (2%)
 Frame = -3

Query: 2048 LEEAKKGMAVAGKTN-VTP---MEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSW 1881
            ++++   +AVA  T+  TP    E+   + E   + +K   K+A K  L    + S  ++
Sbjct: 702  VKDSSPYLAVASNTSGSTPKDLFEDVAEELEKQYHEDKARIKDAMK--LSKVTIASTWTF 759

Query: 1880 EQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESR 1701
                  I++D     +  +   K  F E L + K+ + +E + K++R  ++F  +L   +
Sbjct: 760  GDFKAAILDDVGSPNISDVN-LKLVFEELLDRIKEKEEKEAK-KRQRLADDFNDLLRSKK 817

Query: 1700 ELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEY 1521
            E+T+S+ W     +FE+ + Y+++      +++FE Y+  LQ+K + K   + KR   + 
Sbjct: 818  EITASSNWEDCKPLFEESQEYRSIGEESFGREIFEEYIAHLQEKAKEK---ERKREEEKA 874

Query: 1520 RQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDL--EKEDEEQMKI 1347
            ++  E  +  K   + RK +DR  + E+     + D  E     +      KED+++ K 
Sbjct: 875  KKEKEREEKEKRKEKERKEKDRDREREKGKERSRKDETESENVDVTGSYGYKEDKKREKD 934

Query: 1346 QKEKLRRAERKNRDEFRKLMEE 1281
            +  K R+  +   D+     EE
Sbjct: 935  KDRKHRKRHQSAVDDASSDKEE 956


>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
            protein 40A isoform 1 [Theobroma cacao]
            gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 527/873 (60%), Positives = 626/873 (71%), Gaps = 19/873 (2%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+N Q S AQP  PP VGS G Q++G P+S QFRPV P QQ Q F+P+ASQQFRP+GQ 
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMP----HVXXXXXXXXX 2964
            +  SNVG                   PR  QPG   PS+Q + +P    +          
Sbjct: 60   VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 2963 XXXXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASG 2784
                    +HMPG+G  GMP SSSY++ PSS+GQ QNN++ASSQ+Q  SQ+HA   P +G
Sbjct: 120  HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 2783 QHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYY 2604
            Q W  +G+Q+      +QQ+GQQP + ++   A+N  P     S+SDWQEHTSADGRRYY
Sbjct: 180  QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYY 238

Query: 2603 YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLA 2424
            YNKKTRQSSWEKPLELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIP+ELKLA
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 2423 REQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2244
            REQA+ +A+ G  S+T + SQ+P    VSS E                            
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 2243 XA----FDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIHT----- 2091
                      ++   S +   NA    SP   VTPLP           T  N +T     
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2090 ------EDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNA 1929
                  +D  +   GAS QD+EEAKKGMA AGK NVTP+EEK  DDEPLVYANKQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1928 FKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIK 1749
            FK+LLESANV+SD +WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK +AEERR++
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1748 QKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKK 1569
            QK+AREEFTKMLEES+ELTSS RWSKA ++FE+DER+KAVER RDR+DLFENY++EL++K
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1568 ERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEY 1389
            ER  A E+ +RNI EYR+FLESCDFIK NSQWRKVQDRLEDDERCSRLEKIDRL +FQ+Y
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDY 658

Query: 1388 IRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSP 1209
            I DLEKE+EE+ K+QKE+LRRAERKNRD FRKLM+EHV DG LTAKT+WRDYC+KVKD P
Sbjct: 659  IHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLP 718

Query: 1208 AYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASI 1029
             Y+AV+SNTSGSTPKDLFEDV EELEKQY +DKT IKDA+K G+I++ STWT+EDFKA+I
Sbjct: 719  PYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAI 778

Query: 1028 SDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWE 849
            S++V S PIS+ NLKLV++EL              RQ LADDF+ LL++ KEITASS WE
Sbjct: 779  SEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWE 838

Query: 848  DCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            D +PLFE+SQEYRSIA++S R+EIFEEYI  LQ
Sbjct: 839  DSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 871



 Score = 70.1 bits (170), Expect = 7e-09
 Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
 Frame = -3

Query: 2027 MAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSW--EQAMRVIIN 1854
            +AVA  T+ +  ++   D    +    Q+ K   K  ++S  +    +W  E     I  
Sbjct: 721  LAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISE 780

Query: 1853 DKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWS 1674
            D   G+L       +   E L +  K   E+   K++R  ++FTK+L   +E+T+S+ W 
Sbjct: 781  D--VGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWE 838

Query: 1673 KAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDF 1494
             +  +FE+ + Y+++     R+++FE Y+  LQ+K + K   + KR   + ++  E  + 
Sbjct: 839  DSRPLFEESQEYRSIAEESLRREIFEEYIAYLQEKAKEK---ERKREEEKAKKEKEREEK 895

Query: 1493 IKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERK 1314
             K   + RK ++R  + E+     K D  +       +L+  D    K  K+K +  +RK
Sbjct: 896  EKRKEKERKEKEREREREKGKERTKKDETD-----SENLDISDSHGHKEDKKKEKEKDRK 950

Query: 1313 NR 1308
            +R
Sbjct: 951  HR 952


>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
            gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
            40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  998 bits (2579), Expect = 0.0
 Identities = 528/882 (59%), Positives = 627/882 (71%), Gaps = 28/882 (3%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+N Q S AQP  PP VGS G Q++G P+S QFRPV P QQ Q F+P+ASQQFRP+GQ 
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMP----HVXXXXXXXXX 2964
            +  SNVG                   PR  QPG   PS+Q + +P    +          
Sbjct: 60   VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 2963 XXXXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASG 2784
                    +HMPG+G  GMP SSSY++ PSS+GQ QNN++ASSQ+Q  SQ+HA   P +G
Sbjct: 120  HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 2783 QHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYY 2604
            Q W  +G+Q+      +QQ+GQQP + ++   A+N  P     S+SDWQEHTSADGRRYY
Sbjct: 180  QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYY 238

Query: 2603 YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLA 2424
            YNKKTRQSSWEKPLELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIP+ELKLA
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 2423 REQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2244
            REQA+ +A+ G  S+T + SQ+P    VSS E                            
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 2243 XA----FDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIHT----- 2091
                      ++   S +   NA    SP   VTPLP           T  N +T     
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2090 ------EDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNA 1929
                  +D  +   GAS QD+EEAKKGMA AGK NVTP+EEK  DDEPLVYANKQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1928 FKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIK 1749
            FK+LLESANV+SD +WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK +AEERR++
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1748 QKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKK 1569
            QK+AREEFTKMLEES+ELTSS RWSKA ++FE+DER+KAVER RDR+DLFENY++EL++K
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1568 ERVKALEDHKRNILEYRQFLESCDFIKV---------NSQWRKVQDRLEDDERCSRLEKI 1416
            ER  A E+ +RNI EYR+FLESCDFIKV         NSQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 1415 DRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRD 1236
            DRL +FQ+YI DLEKE+EE+ K+QKE+LRRAERKNRD FRKLM+EHV DG LTAKT+WRD
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRD 718

Query: 1235 YCMKVKDSPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTW 1056
            YC+KVKD P Y+AV+SNTSGSTPKDLFEDV EELEKQY +DKT IKDA+K G+I++ STW
Sbjct: 719  YCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTW 778

Query: 1055 TLEDFKASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIK 876
            T+EDFKA+IS++V S PIS+ NLKLV++EL              RQ LADDF+ LL++ K
Sbjct: 779  TVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838

Query: 875  EITASSKWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            EITASS WED +PLFE+SQEYRSIA++S R+EIFEEYI  LQ
Sbjct: 839  EITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 880



 Score = 63.2 bits (152), Expect = 8e-07
 Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
 Frame = -3

Query: 2027 MAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSW--EQAMRVIIN 1854
            +AVA  T+ +  ++   D    +    Q+ K   K  ++S  +    +W  E     I  
Sbjct: 730  LAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISE 789

Query: 1853 DKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWS 1674
            D   G+L       +   E L +  K   E+   K++R  ++FTK+L   +E+T+S+ W 
Sbjct: 790  D--VGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWE 847

Query: 1673 KAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEY 1521
             +  +FE+ + Y+++     R+++FE Y+  LQ+K + K  +  +  + E+
Sbjct: 848  DSRPLFEESQEYRSIAEESLRREIFEEYIAYLQEKAKEKERKREEEKVCEF 898


>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
            gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
            40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  998 bits (2579), Expect = 0.0
 Identities = 528/882 (59%), Positives = 627/882 (71%), Gaps = 28/882 (3%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+N Q S AQP  PP VGS G Q++G P+S QFRPV P QQ Q F+P+ASQQFRP+GQ 
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMP----HVXXXXXXXXX 2964
            +  SNVG                   PR  QPG   PS+Q + +P    +          
Sbjct: 60   VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 2963 XXXXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASG 2784
                    +HMPG+G  GMP SSSY++ PSS+GQ QNN++ASSQ+Q  SQ+HA   P +G
Sbjct: 120  HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 2783 QHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYY 2604
            Q W  +G+Q+      +QQ+GQQP + ++   A+N  P     S+SDWQEHTSADGRRYY
Sbjct: 180  QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYY 238

Query: 2603 YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLA 2424
            YNKKTRQSSWEKPLELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIP+ELKLA
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 2423 REQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2244
            REQA+ +A+ G  S+T + SQ+P    VSS E                            
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 2243 XA----FDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIHT----- 2091
                      ++   S +   NA    SP   VTPLP           T  N +T     
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2090 ------EDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNA 1929
                  +D  +   GAS QD+EEAKKGMA AGK NVTP+EEK  DDEPLVYANKQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1928 FKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIK 1749
            FK+LLESANV+SD +WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK +AEERR++
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1748 QKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKK 1569
            QK+AREEFTKMLEES+ELTSS RWSKA ++FE+DER+KAVER RDR+DLFENY++EL++K
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1568 ERVKALEDHKRNILEYRQFLESCDFIKV---------NSQWRKVQDRLEDDERCSRLEKI 1416
            ER  A E+ +RNI EYR+FLESCDFIKV         NSQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 1415 DRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRD 1236
            DRL +FQ+YI DLEKE+EE+ K+QKE+LRRAERKNRD FRKLM+EHV DG LTAKT+WRD
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRD 718

Query: 1235 YCMKVKDSPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTW 1056
            YC+KVKD P Y+AV+SNTSGSTPKDLFEDV EELEKQY +DKT IKDA+K G+I++ STW
Sbjct: 719  YCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTW 778

Query: 1055 TLEDFKASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIK 876
            T+EDFKA+IS++V S PIS+ NLKLV++EL              RQ LADDF+ LL++ K
Sbjct: 779  TVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838

Query: 875  EITASSKWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            EITASS WED +PLFE+SQEYRSIA++S R+EIFEEYI  LQ
Sbjct: 839  EITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 880



 Score = 70.1 bits (170), Expect = 7e-09
 Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
 Frame = -3

Query: 2027 MAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSW--EQAMRVIIN 1854
            +AVA  T+ +  ++   D    +    Q+ K   K  ++S  +    +W  E     I  
Sbjct: 730  LAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAISE 789

Query: 1853 DKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWS 1674
            D   G+L       +   E L +  K   E+   K++R  ++FTK+L   +E+T+S+ W 
Sbjct: 790  D--VGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWE 847

Query: 1673 KAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDF 1494
             +  +FE+ + Y+++     R+++FE Y+  LQ+K + K   + KR   + ++  E  + 
Sbjct: 848  DSRPLFEESQEYRSIAEESLRREIFEEYIAYLQEKAKEK---ERKREEEKAKKEKEREEK 904

Query: 1493 IKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERK 1314
             K   + RK ++R  + E+     K D  +       +L+  D    K  K+K +  +RK
Sbjct: 905  EKRKEKERKEKEREREREKGKERTKKDETD-----SENLDISDSHGHKEDKKKEKEKDRK 959

Query: 1313 NR 1308
            +R
Sbjct: 960  HR 961


>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
            gi|462423966|gb|EMJ28229.1| hypothetical protein
            PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  996 bits (2576), Expect = 0.0
 Identities = 524/875 (59%), Positives = 625/875 (71%), Gaps = 21/875 (2%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+NPQSS AQP RPP V S G Q+FG   S+Q+RPV P QQ Q F+ SASQQF+P+GQG
Sbjct: 1    MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQG 60

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXX 2952
            I  SNVG                    R  QPGH TPSSQ++PM ++             
Sbjct: 61   IPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTRPITSAPSQSQ 120

Query: 2951 XXXXN---HMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQ 2781
                     MPG+ G GMP SSSY FAP SY Q QNN+++SSQ+Q ISQ+ A  +  +GQ
Sbjct: 121  QPALPFNNQMPGLAGGGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAH-VSVTGQ 179

Query: 2780 HWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYY 2601
             W  +G+Q A   T V QSGQQPS T     A NV P+   QSSSDWQEHTS DGRRYY+
Sbjct: 180  PWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNV-PSQTQQSSSDWQEHTSGDGRRYYF 238

Query: 2600 NKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLAR 2421
            N++T+QSSWEKPLELMTP+ERADASTVWKE+T+ +G+KYYYNK+T++SKWTIP+ELKLAR
Sbjct: 239  NRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAR 298

Query: 2420 EQAENMANHGIQSETALTSQSPGVVTV-------SSVEXXXXXXXXXXXXXXXXXXXXXX 2262
            EQA+     G +SE  LTS +P  V         SSV                       
Sbjct: 299  EQAQRELAQGTRSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSS 358

Query: 2261 XXXXXXXAFDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXT--------- 2109
                   A    S+ S + +     VG   PV  VTP P           T         
Sbjct: 359  FSNPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPPTLVNAITKSV 418

Query: 2108 --GENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAK 1935
               EN+ ++DI ++  GA  QD+EEAK+GMAVAGK NVTP EEK VD+EPLVYA+KQEAK
Sbjct: 419  STFENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYASKQEAK 478

Query: 1934 NAFKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERR 1755
            NAFKALLESANV SD +WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK + EERR
Sbjct: 479  NAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERR 538

Query: 1754 IKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQ 1575
            ++QK+AREEF+KMLEES+EL S+TRWSKA++MFE+DER+KAVER RDR+DL+E+Y++EL+
Sbjct: 539  MRQKKAREEFSKMLEESKELMSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELE 598

Query: 1574 KKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 1395
            +KE+ KA EDHK+NI EYR+FLESCDFIKVNSQWRKVQDRLEDDERC RLEK+DRL IFQ
Sbjct: 599  RKEKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQ 658

Query: 1394 EYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKD 1215
            +YIRDLEKE+EEQ KIQKE+LRR ERKNRDEFRKLMEEHV DG LTAKT+WRDYCMKVKD
Sbjct: 659  DYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCMKVKD 718

Query: 1214 SPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKA 1035
              +Y AV+SNTSGSTPK+LFEDVAEELEKQYHEDK RIKDA+KLG++TLAST T E+FK 
Sbjct: 719  LSSYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKV 778

Query: 1034 SISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSK 855
            +I +++  P IS+ N KLV++EL              RQ L DDF+ LL++ KEITASS 
Sbjct: 779  AILEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSN 838

Query: 854  WEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            WEDCK LFE++QEYRSI +++F +E+FEEYIT LQ
Sbjct: 839  WEDCKHLFEETQEYRSIGEENFSREVFEEYITNLQ 873



 Score = 72.8 bits (177), Expect = 1e-09
 Identities = 58/248 (23%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
 Frame = -3

Query: 2018 AGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWEQAMRVIINDKRYG 1839
            +G T     E+   + E   + +K   K+A K  L    + S  ++E+    I+ D  + 
Sbjct: 730  SGSTPKELFEDVAEELEKQYHEDKARIKDAMK--LGKVTLASTLTFEEFKVAILEDIGFP 787

Query: 1838 ALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSKAITM 1659
            ++  +   K  + E L + K+ + +E + K++R  ++F K+L   +E+T+S+ W     +
Sbjct: 788  SISDINF-KLVYEELLERAKEKEEKEAK-KRQRLGDDFNKLLHTFKEITASSNWEDCKHL 845

Query: 1658 FEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFIKVNS 1479
            FE+ + Y+++      +++FE Y+  LQ+K + K   + KR   + ++  E  +  K   
Sbjct: 846  FEETQEYRSIGEENFSREVFEEYITNLQEKAKEK---ERKREEEKAKKEREREEKEKRKD 902

Query: 1478 QWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDL--EKEDEEQMKIQKEKLRRAERKNRD 1305
            + RK ++R  + E+     K D  +     I D    KED+++ K +  K R+  + + D
Sbjct: 903  KERKEKEREREKEKGKERSKKDETDSENVDITDSHGHKEDKKREKDKDRKHRKRHQSSMD 962

Query: 1304 EFRKLMEE 1281
            +     EE
Sbjct: 963  DVGSDKEE 970


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
            gi|548831471|gb|ERM94279.1| hypothetical protein
            AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  956 bits (2470), Expect = 0.0
 Identities = 510/856 (59%), Positives = 600/856 (70%), Gaps = 19/856 (2%)
 Frame = -3

Query: 3260 VGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQGISVSNVGXXXXXXXXXX 3081
            +G  G QN+G PMSMQFRP+ P QQ+QPF+ + SQQFRP+GQGI  SN+G          
Sbjct: 1    MGPGGPQNYGTPMSMQFRPMVPTQQSQPFISAPSQQFRPVGQGIPASNIGSPSPVQAQQA 60

Query: 3080 XXXXXXXXXP-RTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXXXXXXNHM----PGVGG 2916
                     P R  Q     PS Q++P+ ++                  H+    PG+GG
Sbjct: 61   QYALGMQQLPPRPAQTAQVAPSPQTVPLSYIQPNRPMTSGPLQIPQNPQHVNIHPPGLGG 120

Query: 2915 LGMPLSSSYTF-APSSYGQSQNNINASSQYQQISQMHAPTIPAS--GQHWSMTGSQNALP 2745
             G  LSSSYTF APSSY   QNNIN SSQYQ  SQM  P +P+   GQ W  +GSQ+   
Sbjct: 121  PGTVLSSSYTFTAPSSYVHPQNNINISSQYQPSSQMQVPGVPSGSGGQPWLSSGSQSTTV 180

Query: 2744 VTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYNKKTRQSSWEKP 2565
            +  V Q+ QQ S  A+  P +  QPN  +QSSSDWQEHTSADGRRYYYNKKTRQSSWEKP
Sbjct: 181  IPPVVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRYYYNKKTRQSSWEKP 240

Query: 2564 LELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLAREQAENMANHGIQ 2385
            LELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIPDELKLAREQAE        
Sbjct: 241  LELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPDELKLAREQAEKNGTQLTN 300

Query: 2384 SETA--LTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDSQSIHSE 2211
            SET   + S +P  VTV   E                                  +I + 
Sbjct: 301  SETTDVVASSTPVTVTVPLTEMPSTVA----------------------------AISAT 332

Query: 2210 SSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTG--------ENIHTEDIANSVGGASV 2055
             SA+   +    SPV  VTP+             G        +N+  E IA      S 
Sbjct: 333  QSAMPSTSGMATSPVL-VTPVVSVPAAAVDPSSAGAAYEKIKVDNVSPESIAQVADETSA 391

Query: 2054 QDLEEAKKGMAVAGKTNVTPM-EEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWE 1878
            QDLEEA+K M VAGK N+TP  +EK VD+EPLV+A+KQEAKNAFK LL SA+VESD +W+
Sbjct: 392  QDLEEARKAMPVAGKVNITPTSDEKTVDEEPLVFASKQEAKNAFKELLVSAHVESDWTWD 451

Query: 1877 QAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRE 1698
            QAMRVIINDKRYGALKTLGERKQAFNEYLGQRKK +AEE+R +QK+ARE+F KMLEES+E
Sbjct: 452  QAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEEKRTRQKKAREDFVKMLEESKE 511

Query: 1697 LTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYR 1518
            LTS+T+WSKAITMFEDDER++AVER RDR++LFE +L EL +KER KA E+H+RN+ EYR
Sbjct: 512  LTSATKWSKAITMFEDDERFRAVERGRDREELFEMHLEELHRKERAKAQEEHRRNVQEYR 571

Query: 1517 QFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKE 1338
             FLESCDFIK +SQWRKVQDRLEDDERC+RLEKIDRLEIFQEYIRDLEKE+EEQ K+QKE
Sbjct: 572  AFLESCDFIKASSQWRKVQDRLEDDERCARLEKIDRLEIFQEYIRDLEKEEEEQRKLQKE 631

Query: 1337 KLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDL 1158
             LRRAERKNRD+FRKLME H+  GILTAKTHWR+YCMKVKD PAY+AVSSNTSGSTPKDL
Sbjct: 632  HLRRAERKNRDDFRKLMEGHIAAGILTAKTHWREYCMKVKDLPAYLAVSSNTSGSTPKDL 691

Query: 1157 FEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVSSPPISNTNLKLV 978
            FED AEEL+KQY ED+TRIKDA+K+ R  + STW+ E+FK +IS++ +   IS TNLKLV
Sbjct: 692  FEDTAEELDKQYQEDRTRIKDAVKMARFVMTSTWSFENFKEAISEDNNLKSISETNLKLV 751

Query: 977  FDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPLFEDSQEYRSIAD 798
            FDEL              RQ +ADD  DLLYSIK+I+ASS+WE+CKPL E++Q YRSI D
Sbjct: 752  FDELLERLKEKEEKEAKKRQRMADDLKDLLYSIKDISASSRWEECKPLLEENQAYRSIND 811

Query: 797  DSFRKEIFEEYITLLQ 750
            +SF ++IFEEY+  LQ
Sbjct: 812  ESFARQIFEEYVAYLQ 827



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 61/257 (23%), Positives = 125/257 (48%), Gaps = 8/257 (3%)
 Frame = -3

Query: 2027 MAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSW--EQAMRVIIN 1854
            +AV+  T+ +  ++   D    +    QE +   K  ++ A      +W  E     I  
Sbjct: 677  LAVSSNTSGSTPKDLFEDTAEELDKQYQEDRTRIKDAVKMARFVMTSTWSFENFKEAISE 736

Query: 1853 DKRYGALKTLGER--KQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTR 1680
            D     LK++ E   K  F+E L + K+ + +E + K++R  ++   +L   +++++S+R
Sbjct: 737  DNN---LKSISETNLKLVFDELLERLKEKEEKEAK-KRQRMADDLKDLLYSIKDISASSR 792

Query: 1679 WSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESC 1500
            W +   + E+++ Y+++      + +FE Y+  LQ+K + K   + KR   + R+  E  
Sbjct: 793  WEECKPLLEENQAYRSINDESFARQIFEEYVAYLQEKIKEK---ERKREEEKARKEKERE 849

Query: 1499 DFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ-EYIRDLEKEDEEQMKIQKEKLRRA 1323
            +  K   + RK ++R  D E+  R  + D +++   + I D   +D++  K +KEK RR 
Sbjct: 850  EKEKRKEKERKEKERDRDREKKDRARR-DEMDVENLDVINDFGHKDDK--KREKEKDRRH 906

Query: 1322 ERKNR---DEFRKLMEE 1281
             ++++   DE     EE
Sbjct: 907  RKRHQSAADELSSGKEE 923


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  941 bits (2431), Expect = 0.0
 Identities = 496/838 (59%), Positives = 597/838 (71%), Gaps = 20/838 (2%)
 Frame = -3

Query: 3203 VAPQQQAQPFMPSASQQFRPLGQGISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGT 3024
            + P Q  QPF+PS SQQF+P+GQGI   N+G                   PR  QPGH  
Sbjct: 1    MVPNQHGQPFIPS-SQQFQPVGQGIPPPNLGMHPAHSQPVQFSQQMQQYPPRPSQPGHPM 59

Query: 3023 PSSQSIPMPHVXXXXXXXXXXXXXXXXXN---HMPGVGGLGMPLSSSYTFAPSSYGQSQN 2853
            PSSQ +PM ++                      MP  G   MP SSSY++APSS+ Q QN
Sbjct: 60   PSSQGLPMSYIQTRPIAPGPPQSQQHAAPFTNQMPPGGA--MPFSSSYSYAPSSFVQPQN 117

Query: 2852 NINASSQYQQISQMHAPTIPASGQHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQ 2673
            N ++ SQ+QQ+SQM APT P  GQ W  +G  +A PV   QQ GQ PS  ++   A+NV 
Sbjct: 118  NASSVSQFQQMSQMQAPTAPGPGQPWLSSGIHSAPPVAPGQQVGQPPSAASSADAATNV- 176

Query: 2672 PNSNTQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEG 2493
            P++  QSSSDWQEHTS+DGRRYYYNK+T+QS W+KP+ELMTPIERADASTVWKE+++ +G
Sbjct: 177  PSTTQQSSSDWQEHTSSDGRRYYYNKRTKQSVWDKPVELMTPIERADASTVWKEYSSPDG 236

Query: 2492 RKYYYNKITKQSKWTIPDELKLAREQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXX 2313
            RKYYYNK+TKQSKWTIP+ELKLAREQA+  ++ G+QSET L S  P  V  S +      
Sbjct: 237  RKYYYNKVTKQSKWTIPEELKLAREQAQKESSQGMQSETGLASHGPVAVGSSEMPSAGTP 296

Query: 2312 XXXXXXXXXXXXXXXXXXXXXXXXAFDSQSIHSESSAV------TMNAVGGHSPVAPVTP 2151
                                      +S    S SSA         +AV    P+  VTP
Sbjct: 297  VASGAPLVATGVASSPVAVTPVASLPNSSMTISGSSATPGSQSAVASAVAVQPPMVTVTP 356

Query: 2150 L-----------PXXXXXXXXXXXTGENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTN 2004
            L           P           T +N  ++DIA+SV GAS+ D+EEAKKGMAVAGK N
Sbjct: 357  LNPAISGSTGVSPALGNANTTPVRTYDNRVSQDIASSVDGASILDIEEAKKGMAVAGKIN 416

Query: 2003 VTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWEQAMRVIINDKRYGALKTL 1824
            VTP+EEK VDDEPLV+ANKQEAKNAFK+LLESANV+SD +WEQAMR IINDKRYGALKTL
Sbjct: 417  VTPVEEKPVDDEPLVFANKQEAKNAFKSLLESANVQSDWTWEQAMREIINDKRYGALKTL 476

Query: 1823 GERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDE 1644
            GERKQAFNEYLGQRKK +AEERR++QK+AREEFT MLEES+ELTSSTRWSKA++MFE+DE
Sbjct: 477  GERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTIMLEESKELTSSTRWSKAVSMFENDE 536

Query: 1643 RYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKV 1464
            R+KAVER RDR+DLFE+Y++EL++KE+ KA E+H+RN  EYR+FLESCDFIKVNSQWRKV
Sbjct: 537  RFKAVERARDREDLFESYIVELERKEKEKAAEEHRRNAAEYRKFLESCDFIKVNSQWRKV 596

Query: 1463 QDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLME 1284
            Q RLEDDERC RLEK+DRL IFQ+YIRDLEKE+EEQ KIQKE+LRR ERKNRDEFRKLME
Sbjct: 597  QVRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLME 656

Query: 1283 EHVTDGILTAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTR 1104
            EH+    LTAKT WRDYC+KVKD P Y AV+SNTSGSTPKDLFEDV EELEKQYH+DK R
Sbjct: 657  EHIDAAALTAKTPWRDYCLKVKDLPQYEAVASNTSGSTPKDLFEDVTEELEKQYHDDKAR 716

Query: 1103 IKDALKLGRITLASTWTLEDFKASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXX 924
            +KD LKLG+++  S+WT +DFKA+I +++ SPPI   NLKLV++EL              
Sbjct: 717  VKDTLKLGKVSFESSWTFDDFKAAILEDIGSPPILEINLKLVYEELLERAKEKEEKETKK 776

Query: 923  RQHLADDFSDLLYSIKEITASSKWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            RQ LADDF+ LL+S KEIT +S WEDC+ LFE+ QEYR+I ++S  ++IFEEYIT LQ
Sbjct: 777  RQRLADDFTKLLHSKKEITTTSNWEDCRQLFEECQEYRAIGEESVTRDIFEEYITHLQ 834



 Score = 77.0 bits (188), Expect = 6e-11
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 2/287 (0%)
 Frame = -3

Query: 2090 EDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLE 1911
            E +A++  G++ +DL E           +VT   EK+  D+      K   K+  K  L 
Sbjct: 684  EAVASNTSGSTPKDLFE-----------DVTEELEKQYHDD------KARVKDTLK--LG 724

Query: 1910 SANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRARE 1731
              + ES  +++     I+ D   G+   L    +   E L +R K   E+   K++R  +
Sbjct: 725  KVSFESSWTFDDFKAAILED--IGSPPILEINLKLVYEELLERAKEKEEKETKKRQRLAD 782

Query: 1730 EFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKAL 1551
            +FTK+L   +E+T+++ W     +FE+ + Y+A+      +D+FE Y+  LQ+K + K  
Sbjct: 783  DFTKLLHSKKEITTTSNWEDCRQLFEECQEYRAIGEESVTRDIFEEYITHLQEKAKEK-- 840

Query: 1550 EDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEK 1371
             + KR   + R+  E     +   + RK +++  D ER    E+  + +       D E 
Sbjct: 841  -ERKREEEKARKEKE-----REEKEKRKEKEKDRDREREKGKERSKKED------TDSEN 888

Query: 1370 EDEEQMKIQKEKLRRAERKNRDEFRKLMEEH--VTDGILTAKTHWRD 1236
             D       KE  +R + ++RD  RK  + H   TD I + K    D
Sbjct: 889  MDITDSHGNKEDKKREKDRDRDRDRKHRKRHQSATDDISSDKDEKED 935


>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
            gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
            40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  932 bits (2410), Expect = 0.0
 Identities = 496/840 (59%), Positives = 590/840 (70%), Gaps = 28/840 (3%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+N Q S AQP  PP VGS G Q++G P+S QFRPV P QQ Q F+P+ASQQFRP+GQ 
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMP----HVXXXXXXXXX 2964
            +  SNVG                   PR  QPG   PS+Q + +P    +          
Sbjct: 60   VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 2963 XXXXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASG 2784
                    +HMPG+G  GMP SSSY++ PSS+GQ QNN++ASSQ+Q  SQ+HA   P +G
Sbjct: 120  HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 2783 QHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYY 2604
            Q W  +G+Q+      +QQ+GQQP + ++   A+N  P     S+SDWQEHTSADGRRYY
Sbjct: 180  QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANA-PIHTPPSASDWQEHTSADGRRYY 238

Query: 2603 YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLA 2424
            YNKKTRQSSWEKPLELMTPIERADASTVWKEFTT EGRKYYYNK+TKQSKWTIP+ELKLA
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 2423 REQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2244
            REQA+ +A+ G  S+T + SQ+P    VSS E                            
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 2243 XA----FDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIHT----- 2091
                      ++   S +   NA    SP   VTPLP           T  N +T     
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2090 ------EDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNA 1929
                  +D  +   GAS QD+EEAKKGMA AGK NVTP+EEK  DDEPLVYANKQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1928 FKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIK 1749
            FK+LLESANV+SD +WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK +AEERR++
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1748 QKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKK 1569
            QK+AREEFTKMLEES+ELTSS RWSKA ++FE+DER+KAVER RDR+DLFENY++EL++K
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1568 ERVKALEDHKRNILEYRQFLESCDFIKV---------NSQWRKVQDRLEDDERCSRLEKI 1416
            ER  A E+ +RNI EYR+FLESCDFIKV         NSQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 1415 DRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRD 1236
            DRL +FQ+YI DLEKE+EE+ K+QKE+LRRAERKNRD FRKLM+EHV DG LTAKT+WRD
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRD 718

Query: 1235 YCMKVKDSPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTW 1056
            YC+KVKD P Y+AV+SNTSGSTPKDLFEDV EELEKQY +DKT IKDA+K G+I++ STW
Sbjct: 719  YCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTW 778

Query: 1055 TLEDFKASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIK 876
            T+EDFKA+IS++V S PIS+ NLKLV++EL              RQ LADDF+ LL++ K
Sbjct: 779  TVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  919 bits (2374), Expect = 0.0
 Identities = 489/873 (56%), Positives = 597/873 (68%), Gaps = 19/873 (2%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MASNPQSSG Q                      FRP+ P QQ QPF+  ASQQFRP+GQG
Sbjct: 1    MASNPQSSGGQ----------------------FRPMVPTQQGQPFIQVASQQFRPVGQG 38

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPH--VXXXXXXXXXXX 2958
            +  S+VG                   P   QPG   PS+Q++ MP+  +           
Sbjct: 39   MPSSHVGMPAAQSQHLQFSQPIQQLPPWPNQPG--APSAQALSMPYGQLNRPLTSSQPQQ 96

Query: 2957 XXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQH 2778
                  NHM  VG  G+P SS Y FAPSS+G +QN+ +A  Q+  +SQMHA  +P  GQ 
Sbjct: 97   NAPPLSNHMHVVGTSGVPNSSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQP 156

Query: 2777 WSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYN 2598
            W  +GS  A  V  VQ +  QPS+++++     V  NS  QS SDWQEHT++DGRRYYYN
Sbjct: 157  WLSSGSHGASLVPPVQPAVVQPSISSSSDSTVAVSSNSQ-QSLSDWQEHTASDGRRYYYN 215

Query: 2597 KKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLARE 2418
            ++T+QSSW+KP ELMTPIERADASTVWKEFTTQEG+KYYYNK+TKQSKW+IP+ELK+ARE
Sbjct: 216  RRTKQSSWDKPFELMTPIERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMARE 275

Query: 2417 QAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 2238
            QA+     G QSET   S  P  V V+S E                              
Sbjct: 276  QAQQTVGQGNQSETDAASNVPTAVAVTSSETSTTAVSVSSSSVMLPGVSSSPISVTAVAN 335

Query: 2237 FDSQSIHSESS-----AVTMNAVGGHSPVAP-VTPLPXXXXXXXXXXXTG---------- 2106
                 +    +     + T +AVG    V P VTPLP                       
Sbjct: 336  PPPVVVSGSPALPVAHSTTASAVG----VQPSVTPLPTAVSVGTGAPAAAVDAKTTSLSS 391

Query: 2105 -ENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNA 1929
             +N+ ++  ANSV GAS+ D  E  K     GKTN +P+EEK  D+EPLV+ANK EAKNA
Sbjct: 392  IDNLLSQSAANSVDGASMMDTAEFNKVSMDMGKTNASPLEEKTPDEEPLVFANKLEAKNA 451

Query: 1928 FKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIK 1749
            FKALLESANV+SD +WEQ MR IINDKRY ALKTLGERKQAFNEYLGQRKK +AEERR++
Sbjct: 452  FKALLESANVQSDWTWEQTMREIINDKRYAALKTLGERKQAFNEYLGQRKKLEAEERRVR 511

Query: 1748 QKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKK 1569
            QK+AREEF KMLEES+ELTSS +WSKAI++FE+DERYKA+ER RDR+DLF++Y+++L++K
Sbjct: 512  QKKAREEFAKMLEESKELTSSMKWSKAISLFENDERYKALERARDREDLFDSYIVDLERK 571

Query: 1568 ERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEY 1389
            E+ KA ED +RN+ EYR+FLESCDFIK +SQWRK+QDRLEDDERC  LEK+DRL IFQ+Y
Sbjct: 572  EKEKAAEDRRRNVAEYRKFLESCDFIKASSQWRKIQDRLEDDERCLCLEKLDRLLIFQDY 631

Query: 1388 IRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSP 1209
            IRDLEKE+EEQ KIQKE+LRRAERKNRDEFRKL+EEHV  G LTAKTHW DYC+KVKD P
Sbjct: 632  IRDLEKEEEEQKKIQKEQLRRAERKNRDEFRKLLEEHVASGSLTAKTHWLDYCLKVKDLP 691

Query: 1208 AYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASI 1029
             Y AV++NTSGS PKDLFEDV+EELEKQYH+DKTRIKDA+KLG+IT+ STWT EDFK ++
Sbjct: 692  PYQAVATNTSGSKPKDLFEDVSEELEKQYHDDKTRIKDAMKLGKITMVSTWTFEDFKGAV 751

Query: 1028 SDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWE 849
            +D++ SPPIS+ NLKL+++EL              +Q LADDF+ LLY++KE+T SS WE
Sbjct: 752  ADDIGSPPISDINLKLLYEELVERAKEKEEKEAKKQQRLADDFTKLLYTLKEVTPSSNWE 811

Query: 848  DCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            DCKPLFE+SQEYRSI ++S  KEIFEEY+T LQ
Sbjct: 812  DCKPLFEESQEYRSIGEESLSKEIFEEYVTHLQ 844



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 43/166 (25%), Positives = 79/166 (47%)
 Frame = -3

Query: 1799 EYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERP 1620
            E L +R K   E+   KQ+R  ++FTK+L   +E+T S+ W     +FE+ + Y+++   
Sbjct: 770  EELVERAKEKEEKEAKKQQRLADDFTKLLYTLKEVTPSSNWEDCKPLFEESQEYRSIGEE 829

Query: 1619 RDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDE 1440
               +++FE Y+  LQ+K + K   + KR                   + RK ++R E D+
Sbjct: 830  SLSKEIFEEYVTHLQEKAKEK---ERKRE----------------EEKARKEKEREEKDK 870

Query: 1439 RCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDE 1302
            R  +  K              EKE E++ + ++EK ++  +KN  +
Sbjct: 871  RKEKERK--------------EKEKEKEKEREREKGKQRTKKNETD 902


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
            gi|223550756|gb|EEF52242.1| protein binding protein,
            putative [Ricinus communis]
          Length = 970

 Score =  900 bits (2325), Expect = 0.0
 Identities = 480/830 (57%), Positives = 576/830 (69%), Gaps = 8/830 (0%)
 Frame = -3

Query: 3215 QFRPVAPQQQAQPFMPSASQQFRPLGQGISVSNVGXXXXXXXXXXXXXXXXXXXPR-TGQ 3039
            QFRP    QQ QPFMP   QQF P+ QG+  SNVG                   P     
Sbjct: 11   QFRPA---QQGQPFMP---QQFLPVVQGMP-SNVGMPMPAGQTQTLQFSQPMQPPPWPNH 63

Query: 3038 PGHGTPSSQSIPMPHVXXXXXXXXXXXXXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQS 2859
            P H  PSSQ +P+P                   N  P   G      ++  FAPSSYGQ 
Sbjct: 64   PAHVAPSSQPVPLP--------------PYVHQNRPPLTSGPPQLQQTASLFAPSSYGQL 109

Query: 2858 QNNINASSQYQQISQMHAPTIPASGQHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASN 2679
            QNN  +SSQ+Q + QMH P +PA GQHW  +GS      T VQ +GQQPSV++++    N
Sbjct: 110  QNNAISSSQFQPMPQMHTPVVPAGGQHWLPSGSNGVAVATPVQPTGQQPSVSSSSDSVLN 169

Query: 2678 VQPNSNTQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQ 2499
            V    N QS SDWQEHT++DGRRYYYNK+T+QSSWEKPLELMTP+ERADASTVWKEFTT 
Sbjct: 170  VP---NQQSLSDWQEHTASDGRRYYYNKRTKQSSWEKPLELMTPLERADASTVWKEFTTP 226

Query: 2498 EGRKYYYNKITKQSKWTIPDELKLAREQAENMANHGIQSETALTSQSPGVVTVSSVEXXX 2319
            EG+KYYYNKITKQSKW++PDELKLAREQA+  A  G +SE    S +   V  SS E   
Sbjct: 227  EGKKYYYNKITKQSKWSMPDELKLAREQAQQTATQGTKSEADAASHASVTVNASSGEMST 286

Query: 2318 XXXXXXXXXXXXXXXXXXXXXXXXXXAFD-------SQSIHSESSAVTMNAVGGHSPVAP 2160
                                      A         S S    + ++  NA G   P   
Sbjct: 287  TVIPVGSGFSSTSGVASSPVPVTPVVAVSNPVAAVSSSSALPVAQSIIANAAGVQPPAVT 346

Query: 2159 VTPLPXXXXXXXXXXXTGENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKK 1980
            +T LP             +N+ ++  A SV GAS+Q+ EE KKG  V+ K++    EEK 
Sbjct: 347  MTVLPAAAGGF-------DNVASKGAAPSVDGASIQNSEEVKKGSGVSIKSDANLTEEKN 399

Query: 1979 VDDEPLVYANKQEAKNAFKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFN 1800
            +DDEPL +A+KQEAKNAFKALLESANV+SD +WEQ MR IINDKRYGALKTLGERKQAFN
Sbjct: 400  LDDEPLTFASKQEAKNAFKALLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFN 459

Query: 1799 EYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERP 1620
            EYLGQRKK +AEERR++QKRAREEFTKMLEES+ELTSS +WSKA+++FE+DER+KAVE+ 
Sbjct: 460  EYLGQRKKIEAEERRMRQKRAREEFTKMLEESKELTSSMKWSKAVSLFENDERFKAVEKA 519

Query: 1619 RDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDE 1440
            RDR+DLF+NY++EL++KER KA EDH+RN+ E+++FLESCDFIKVNSQWRKVQDRLEDDE
Sbjct: 520  RDREDLFDNYIVELERKEREKAAEDHRRNVTEFKKFLESCDFIKVNSQWRKVQDRLEDDE 579

Query: 1439 RCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGIL 1260
            RC RLEK+DRL +FQ+YIRDLEKE+EEQ KIQKE+LRRAERKNRD FRKL+EEHV DG L
Sbjct: 580  RCLRLEKLDRLLVFQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDGFRKLLEEHVADGSL 639

Query: 1259 TAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLG 1080
            TAK HW DYC+KVKD P Y AV++NTSGSTPKDLFEDVAEELEKQY +DK R+KDA+K G
Sbjct: 640  TAKAHWLDYCLKVKDLPQYHAVATNTSGSTPKDLFEDVAEELEKQYRDDKARVKDAIKSG 699

Query: 1079 RITLASTWTLEDFKASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDF 900
            +I + STW  EDFKA+I D+VSSPP+S+ NL+L++DEL              RQ LADD 
Sbjct: 700  KIIMTSTWIFEDFKAAILDDVSSPPVSDINLQLIYDELLERAKEKEEKEAKKRQRLADDL 759

Query: 899  SDLLYSIKEITASSKWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            + LL++ KEI ASS WEDC+PLFE+SQEYR+I ++S  KEIFEEYI  LQ
Sbjct: 760  TKLLHTYKEIMASSSWEDCRPLFEESQEYRAIGEESVIKEIFEEYIAHLQ 809



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 53/244 (21%), Positives = 111/244 (45%), Gaps = 8/244 (3%)
 Frame = -3

Query: 2009 TNVTPMEEKKVDDEPLVYANKQ--EAKNAFKALLESANVESDCSW--EQAMRVIINDKRY 1842
            TN +    K + ++      KQ  + K   K  ++S  +    +W  E     I++D   
Sbjct: 663  TNTSGSTPKDLFEDVAEELEKQYRDDKARVKDAIKSGKIIMTSTWIFEDFKAAILDDVSS 722

Query: 1841 GALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSKAIT 1662
              +  +    Q   + L +R K   E+   K++R  ++ TK+L   +E+ +S+ W     
Sbjct: 723  PPVSDIN--LQLIYDELLERAKEKEEKEAKKRQRLADDLTKLLHTYKEIMASSSWEDCRP 780

Query: 1661 MFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFIKVN 1482
            +FE+ + Y+A+      +++FE Y+  LQ+K + K  +  +  + + ++  E     K  
Sbjct: 781  LFEESQEYRAIGEESVIKEIFEEYIAHLQEKAKEKERKREEEKVKKEKEREE-----KEK 835

Query: 1481 SQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE----KEDEEQMKIQKEKLRRAERK 1314
             + R+ +++ ++ ER    E+I + E   E +   +    KED+++ K +  K R+    
Sbjct: 836  RKERERKEKEKEREREKAKERIKKDETDSENVDTTDSYGHKEDKKREKDKDRKHRKRHHS 895

Query: 1313 NRDE 1302
              DE
Sbjct: 896  GTDE 899


>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  899 bits (2322), Expect = 0.0
 Identities = 496/868 (57%), Positives = 578/868 (66%), Gaps = 14/868 (1%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMP--SASQQFRPLG 3138
            MASNP  SG QPL PP VGS   Q FG    MQFRP    QQ Q F P  SAS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVG 59

Query: 3137 QGISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXX 2958
            Q     N G                   PR GQ GHGTPSSQ+I M ++           
Sbjct: 60   Q---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVN 116

Query: 2957 XXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQH 2778
                   HMPGV G G P SSSYT                   Q  SQMH PT PA GQ 
Sbjct: 117  PPLNS--HMPGVSGAGNPFSSSYTV------------------QSSSQMHGPTFPAGGQT 156

Query: 2777 WSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYN 2598
            W  +GSQ          S  Q S  A  VPAS     ++ Q++SDWQE+ +ADGRRYYYN
Sbjct: 157  WLSSGSQTTPVAAPTPPSSHQLSAVAPAVPAST----ASQQTASDWQEYEAADGRRYYYN 212

Query: 2597 KKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLARE 2418
            K T+QSSWEKPLELMTP+ERADASTVWKEFTT +GRKYYYNK TKQSKWTIPDELKLARE
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARE 272

Query: 2417 QAENMA----------NHGIQSETALT-SQSPGVVT-VSSVEXXXXXXXXXXXXXXXXXX 2274
             AEN A          N G+Q   A+T ++ P  VT VSS                    
Sbjct: 273  LAENAAGQVVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAV 332

Query: 2273 XXXXXXXXXXXAFDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIH 2094
                          S +I S S AVT +A      V+  T                EN+ 
Sbjct: 333  SDVNTPPLVVSG--SSAIPSVSLAVTSSAGVSSPAVSGSTESAALANAYQTQMSGIENLS 390

Query: 2093 TEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALL 1914
             + +A+S+ GAS QD+EEAKKGMAVAGK NV P EEK  D+EP +YA KQEAKNAFKALL
Sbjct: 391  PQ-VASSLSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALL 449

Query: 1913 ESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAR 1734
            ESANVESD +WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKK +AEERR++Q++A+
Sbjct: 450  ESANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAK 509

Query: 1733 EEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKA 1554
            EEFTKMLEES+ELTSSTRWSKA+TMFEDDER+KAVER  DR+DLF NYL++LQKKER KA
Sbjct: 510  EEFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKA 569

Query: 1553 LEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 1374
             E+++RN LEY+QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRLEIFQEYIRDLE
Sbjct: 570  QEEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLE 629

Query: 1373 KEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAV 1194
            KEDEEQ K+QKE+LRRAERKNRD FRK++EEH+  G+LTAKT WRDYC  VK+  AY AV
Sbjct: 630  KEDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAV 689

Query: 1193 SSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVS 1014
            +SNTSGSTPKDLFEDV EELEKQYHEDK R+KD +K  +IT++STWT EDFK +I + + 
Sbjct: 690  ASNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIG 749

Query: 1013 SPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPL 834
            SP I + NL+L+F++L               Q LA DF+D L SIKEIT SS WE+ K L
Sbjct: 750  SPSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKEL 809

Query: 833  FEDSQEYRSIADDSFRKEIFEEYITLLQ 750
             EDS E+R+I +++  + +FEEY+  LQ
Sbjct: 810  VEDSSEFRAIGEETISRAVFEEYVAWLQ 837


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  899 bits (2322), Expect = 0.0
 Identities = 496/868 (57%), Positives = 578/868 (66%), Gaps = 14/868 (1%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMP--SASQQFRPLG 3138
            MASNP  SG QPL PP VGS   Q FG    MQFRP    QQ Q F P  SAS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVG 59

Query: 3137 QGISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXX 2958
            Q     N G                   PR GQ GHGTPSSQ+I M ++           
Sbjct: 60   Q---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVN 116

Query: 2957 XXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQH 2778
                   HMPGV G G P SSSYT                   Q  SQMH PT PA GQ 
Sbjct: 117  PPLNS--HMPGVSGAGNPFSSSYTV------------------QSSSQMHGPTFPAGGQT 156

Query: 2777 WSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYN 2598
            W  +GSQ          S  Q S  A  VPAS     ++ Q++SDWQE+ +ADGRRYYYN
Sbjct: 157  WLSSGSQTTPVAAPTPPSSHQLSAVAPAVPAST----ASQQTASDWQEYEAADGRRYYYN 212

Query: 2597 KKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLARE 2418
            K T+QSSWEKPLELMTP+ERADASTVWKEFTT +GRKYYYNK TKQSKWTIPDELKLARE
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARE 272

Query: 2417 QAENMA----------NHGIQSETALT-SQSPGVVT-VSSVEXXXXXXXXXXXXXXXXXX 2274
             AEN A          N G+Q   A+T ++ P  VT VSS                    
Sbjct: 273  LAENAAGQVVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAV 332

Query: 2273 XXXXXXXXXXXAFDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIH 2094
                          S +I S S AVT +A      V+  T                EN+ 
Sbjct: 333  SDVNTPPLVVSG--SSAIPSVSLAVTSSAGVSSPAVSGSTESAALANAYQTQMSGIENLS 390

Query: 2093 TEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALL 1914
             + +A+S+ GAS QD+EEAKKGMAVAGK NV P EEK  D+EP +YA KQEAKNAFKALL
Sbjct: 391  PQ-VASSLSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALL 449

Query: 1913 ESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAR 1734
            ESANVESD +WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKK +AEERR++Q++A+
Sbjct: 450  ESANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAK 509

Query: 1733 EEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKA 1554
            EEFTKMLEES+ELTSSTRWSKA+TMFEDDER+KAVER  DR+DLF NYL++LQKKER KA
Sbjct: 510  EEFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKA 569

Query: 1553 LEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 1374
             E+++RN LEY+QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRLEIFQEYIRDLE
Sbjct: 570  QEEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLE 629

Query: 1373 KEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAV 1194
            KEDEEQ K+QKE+LRRAERKNRD FRK++EEH+  G+LTAKT WRDYC  VK+  AY AV
Sbjct: 630  KEDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAV 689

Query: 1193 SSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVS 1014
            +SNTSGSTPKDLFEDV EELEKQYHEDK R+KD +K  +IT++STWT EDFK +I + + 
Sbjct: 690  ASNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIG 749

Query: 1013 SPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPL 834
            SP I + NL+L+F++L               Q LA DF+D L SIKEIT SS WE+ K L
Sbjct: 750  SPSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKEL 809

Query: 833  FEDSQEYRSIADDSFRKEIFEEYITLLQ 750
             EDS E+R+I +++  + +FEEY+  LQ
Sbjct: 810  VEDSSEFRAIGEETISRAVFEEYVAWLQ 837


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  899 bits (2322), Expect = 0.0
 Identities = 496/868 (57%), Positives = 578/868 (66%), Gaps = 14/868 (1%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMP--SASQQFRPLG 3138
            MASNP  SG QPL PP VGS   Q FG    MQFRP    QQ Q F P  SAS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVG 59

Query: 3137 QGISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXX 2958
            Q     N G                   PR GQ GHGTPSSQ+I M ++           
Sbjct: 60   Q---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVN 116

Query: 2957 XXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQH 2778
                   HMPGV G G P SSSYT                   Q  SQMH PT PA GQ 
Sbjct: 117  PPLNS--HMPGVSGAGNPFSSSYTV------------------QSSSQMHGPTFPAGGQT 156

Query: 2777 WSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYN 2598
            W  +GSQ          S  Q S  A  VPAS     ++ Q++SDWQE+ +ADGRRYYYN
Sbjct: 157  WLSSGSQTTPVAAPTPPSSHQLSAVAPAVPAST----ASQQTASDWQEYEAADGRRYYYN 212

Query: 2597 KKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLARE 2418
            K T+QSSWEKPLELMTP+ERADASTVWKEFTT +GRKYYYNK TKQSKWTIPDELKLARE
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARE 272

Query: 2417 QAENMA----------NHGIQSETALT-SQSPGVVT-VSSVEXXXXXXXXXXXXXXXXXX 2274
             AEN A          N G+Q   A+T ++ P  VT VSS                    
Sbjct: 273  LAENAAGQVVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAV 332

Query: 2273 XXXXXXXXXXXAFDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIH 2094
                          S +I S S AVT +A      V+  T                EN+ 
Sbjct: 333  SDVNTPPLVVSG--SSAIPSVSLAVTSSAGVSSPAVSGSTESAALANAYQTQMSGIENLS 390

Query: 2093 TEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALL 1914
             + +A+S+ GAS QD+EEAKKGMAVAGK NV P EEK  D+EP +YA KQEAKNAFKALL
Sbjct: 391  PQ-VASSLSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALL 449

Query: 1913 ESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAR 1734
            ESANVESD +WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKK +AEERR++Q++A+
Sbjct: 450  ESANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAK 509

Query: 1733 EEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKA 1554
            EEFTKMLEES+ELTSSTRWSKA+TMFEDDER+KAVER  DR+DLF NYL++LQKKER KA
Sbjct: 510  EEFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKA 569

Query: 1553 LEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 1374
             E+++RN LEY+QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRLEIFQEYIRDLE
Sbjct: 570  QEEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLE 629

Query: 1373 KEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAV 1194
            KEDEEQ K+QKE+LRRAERKNRD FRK++EEH+  G+LTAKT WRDYC  VK+  AY AV
Sbjct: 630  KEDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAV 689

Query: 1193 SSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVS 1014
            +SNTSGSTPKDLFEDV EELEKQYHEDK R+KD +K  +IT++STWT EDFK +I + + 
Sbjct: 690  ASNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIG 749

Query: 1013 SPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPL 834
            SP I + NL+L+F++L               Q LA DF+D L SIKEIT SS WE+ K L
Sbjct: 750  SPSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKEL 809

Query: 833  FEDSQEYRSIADDSFRKEIFEEYITLLQ 750
             EDS E+R+I +++  + +FEEY+  LQ
Sbjct: 810  VEDSSEFRAIGEETISRAVFEEYVAWLQ 837



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 75/326 (23%), Positives = 132/326 (40%)
 Frame = -3

Query: 2054 QDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWEQ 1875
            Q ++E     AVA  T+ +  ++   D    +     E K   K +++S  +    +W  
Sbjct: 678  QMVKEFVAYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTF 737

Query: 1874 AMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESREL 1695
                +   +  G+        Q   E L +R K   E+   K +R  ++FT  L   +E+
Sbjct: 738  EDFKVAIFEGIGSPSIHDVNLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEI 797

Query: 1694 TSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQ 1515
            T S+ W ++  + ED   ++A+      + +FE Y+  LQ+K + K   + KR       
Sbjct: 798  TDSSSWEESKELVEDSSEFRAIGEETISRAVFEEYVAWLQEKAKEK---ERKR------- 847

Query: 1514 FLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEK 1335
                        +  KV+   E DE+  R +K  R           EKE E++ + +KEK
Sbjct: 848  ------------EEEKVKKEKEKDEKEKRKDKERR-----------EKEKEKEKEREKEK 884

Query: 1334 LRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDLF 1155
             R  ER  +DE    M   VTD     +   R+   + K    +   SSN   ++ KD  
Sbjct: 885  ERGKERSKKDE-PDSMTMDVTDIYEHKEERKREKDKERKHRKRHH--SSNDELTSEKDEK 941

Query: 1154 EDVAEELEKQYHEDKTRIKDALKLGR 1077
            E+   + E+++ +      D +   R
Sbjct: 942  EESERDKERKHRKHHQSSNDEVTSDR 967


>ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [Theobroma cacao]
            gi|508706620|gb|EOX98516.1| Pre-mRNA-processing protein
            40B, putative [Theobroma cacao]
          Length = 1025

 Score =  894 bits (2311), Expect = 0.0
 Identities = 488/878 (55%), Positives = 594/878 (67%), Gaps = 24/878 (2%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGH-QNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQ 3135
            MA+NPQ SG QP  PPLVGS    +NF PPMS QFRPV P QQ Q F+P A Q F+P+ +
Sbjct: 1    MANNPQFSGVQPHPPPLVGSMDPPRNFPPPMSAQFRPVVPSQQPQQFVPVAPQLFQPVAR 60

Query: 3134 GISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMP----HVXXXXXXXX 2967
            G++V N G                    R  QPGH  P++  I +P    H         
Sbjct: 61   GVTVMNSGFSPQTQQPQFPQVMQQLPA-RPVQPGHIPPAALGISLPTAQPHCHVSPGASL 119

Query: 2966 XXXXXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPAS 2787
                     N++ G  G    LSSSY FA SSYGQ+  + NA +QYQ + Q+ AP++   
Sbjct: 120  PQPNIQTPNNYVSG--GPASHLSSSYPFASSSYGQASVSQNAMAQYQPMPQLQAPSVSVG 177

Query: 2786 GQHWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRY 2607
            G H  +  SQ++  V  V Q  +QPSV+ A VPA ++QP    ++S+DW EHTSA+GRRY
Sbjct: 178  G-HVGIHVSQSSSSVIPVHQIVEQPSVSTATVPAPSIQPKPTEEASTDWIEHTSANGRRY 236

Query: 2606 YYNKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKL 2427
            YYNKKTRQSSWEKPLELMTPIERADAST WKEF + +GRKYY+NK+T QS W+IP+ELKL
Sbjct: 237  YYNKKTRQSSWEKPLELMTPIERADASTNWKEFMSPDGRKYYHNKVTNQSTWSIPEELKL 296

Query: 2426 AREQAENMANHGIQSETA--LTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXX 2253
            AREQ E  +  G QSE +  +   +P  V  SS                           
Sbjct: 297  AREQVEMASAKGTQSEVSSHIPPPAPPAVKASSGADTPPTIIQGAASSPVPVAPVLATSD 356

Query: 2252 XXXXAFDSQS--------------IHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXX 2115
                   + +              + + +  +T++A    SP A +  +           
Sbjct: 357  VKPVVVSASALPVGASSTVTNVDVVRTAADTITLSAAISESPEASIAVVNAVTAPMNNI- 415

Query: 2114 XTGENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAK 1935
                 + + D+ ++  G S Q+ +E  K + V+ K N   +EEK +D +PL YA+KQEAK
Sbjct: 416  ---SKVSSMDMLSTAEGFSAQNADETVKDVVVSEKIN-NALEEKAIDQDPLTYASKQEAK 471

Query: 1934 NAFKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERR 1755
            NAFK LLE ANV SD SW+QAMRVIINDKRYGAL+TLGERKQAFNE+LGQ+KK +AE+RR
Sbjct: 472  NAFKVLLECANVGSDWSWDQAMRVIINDKRYGALRTLGERKQAFNEFLGQKKKQEAEDRR 531

Query: 1754 IKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQ 1575
            IKQK+AREE+  MLEE  ELTSSTRWSKA+ MFEDDERYKAVER +DR+D+FENY+ EL+
Sbjct: 532  IKQKKAREEYKTMLEECSELTSSTRWSKAVAMFEDDERYKAVEREKDRKDIFENYIDELR 591

Query: 1574 KKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 1395
            +KERVKA E  KRNI+EYRQFLESCDFIK NSQWRK+QDRLE DERCSRLEKIDRLEIFQ
Sbjct: 592  QKERVKAQEQRKRNIVEYRQFLESCDFIKANSQWRKLQDRLETDERCSRLEKIDRLEIFQ 651

Query: 1394 EYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKD 1215
            EY+RDLEKE+EEQ KIQKE+LR+AERKNRDEFRKLME HV  G LTAKTHWRDYCM VK+
Sbjct: 652  EYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKLMEGHVAAGTLTAKTHWRDYCMMVKE 711

Query: 1214 SPAYMAVSSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKA 1035
            SP +MAV+SNTSGSTPKDLFEDVAEEL+KQYH+DK R+KDA+KL +I+LASTWTLED K 
Sbjct: 712  SPPFMAVASNTSGSTPKDLFEDVAEELQKQYHDDKARVKDAVKLRKISLASTWTLEDLKV 771

Query: 1034 SISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKE---ITA 864
            +I++++SSPPIS+ NLKLVF+EL              R+HLADDF DLL SIKE   IT+
Sbjct: 772  AIAEDISSPPISDVNLKLVFEELLQRVREKEEKEAKKRKHLADDFYDLLRSIKEDEKITS 831

Query: 863  SSKWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLLQ 750
            SS WEDCK  FE SQE+ SI D+ F K IFEEYIT L+
Sbjct: 832  SSTWEDCKYHFESSQEFSSIGDEGFCKGIFEEYITELK 869


>ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cicer arietinum]
          Length = 1000

 Score =  892 bits (2306), Expect = 0.0
 Identities = 480/847 (56%), Positives = 577/847 (68%), Gaps = 17/847 (2%)
 Frame = -3

Query: 3239 NFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQGISVSNVGXXXXXXXXXXXXXXXXX 3060
            N   P  +QFRPV   QQ QPF+P  SQQF   G  +  SNVG                 
Sbjct: 4    NSQQPSGIQFRPVIHAQQGQPFVPMTSQQFGHAGHAVPSSNVGMPGQQLQYSQSMQQMAP 63

Query: 3059 XXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXXXXXXNH----MPGVGGLGMPLSSS 2892
               R  QPGH   SSQ IPMP++                  H    MPG+   G P  SS
Sbjct: 64   ---RQIQPGHPGSSSQGIPMPYIQTNRPLTSVPQHAQQAVPHVSNHMPGLAVSGAPPQSS 120

Query: 2891 YTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQHWSMTGSQNALPVTHVQQSGQQP 2712
            YTF PS YGQ Q+N NA  QYQ   QM AP    +GQ W  + SQ+A  VT V  +G Q 
Sbjct: 121  YTFTPS-YGQQQDNANALPQYQHQPQMLAPP---AGQPWPSSVSQSAAAVTSVPPAGVQS 176

Query: 2711 SVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPLELMTPIERAD 2532
            S TA+   A+N    +N  S+SDWQEH+SADGRRYYYNK+TRQSSWEKPLELM+P+ERAD
Sbjct: 177  SGTASTDAATNT---TNHNSASDWQEHSSADGRRYYYNKRTRQSSWEKPLELMSPLERAD 233

Query: 2531 ASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLAREQAENMANHGIQSETALTSQSPG 2352
            ASTVWKEFT+ +GRKYYYNK+T+QS WTIP+ELKLARE A    + G  SET+ TS + G
Sbjct: 234  ASTVWKEFTSSDGRKYYYNKVTQQSTWTIPEELKLAREHAHKTISQGTVSETSDTSNAAG 293

Query: 2351 --VVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDSQSIHSES-SAVTMNAVG 2181
                T ++                                F   S  S S S VT +A G
Sbjct: 294  SFAATPTAANADSFNALTSNGLASSPSSITPIAATDHQQLFSGLSGTSVSHSVVTSSATG 353

Query: 2180 GH-SPVAPVTPLPXXXXXXXXXXXTG---------ENIHTEDIANSVGGASVQDLEEAKK 2031
               SPV  V+  P                      EN+ T+D   SV GA +QDLEEAK+
Sbjct: 354  VEPSPVVTVSTAPTTVAGSSGVAANSLDSKIPSIVENLATQDSTTSVNGAPLQDLEEAKR 413

Query: 2030 GMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWEQAMRVIIND 1851
            G+ V GKTNVTP EEK  D E LVYANK EAKNAFKALLES +V+SD +WEQAMR I+ND
Sbjct: 414  GLPVVGKTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMREIVND 473

Query: 1850 KRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSK 1671
            KRY ALKTLGERKQAFNEYLGQRKK +AEERRIKQK+AREEFTKMLEE +ELTSSTRWSK
Sbjct: 474  KRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWSK 533

Query: 1670 AITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFI 1491
            AI+M E DER+ AVERPRDR+DLFE+Y++EL++KE+  A E+H+RN+ EYR+FL+SCD++
Sbjct: 534  AISMLESDERFSAVERPRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLQSCDYV 593

Query: 1490 KVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKN 1311
            KVNS WRK+QDRLEDD+R  +LEKIDRL +FQ+YIRDLEKE+EEQ KIQKE+LRR ERKN
Sbjct: 594  KVNSHWRKIQDRLEDDDRYLQLEKIDRLLVFQDYIRDLEKEEEEQKKIQKERLRRGERKN 653

Query: 1310 RDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDLFEDVAEELE 1131
            RD FRKL+EEHV DG+LTAKT WRDYC+KVK+ P Y AV+SNTSGSTPKDLFEDV E+LE
Sbjct: 654  RDAFRKLLEEHVADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFEDLE 713

Query: 1130 KQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVSSPPISNTNLKLVFDELXXXXX 951
            KQYHEDK+ IKD LK G+IT+ +T   EDFK+ + +E +   IS  NLKL+++EL     
Sbjct: 714  KQYHEDKSLIKDTLKSGKITVVTTSVFEDFKSVVLEEAACQKISEINLKLLYEELLERAK 773

Query: 950  XXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPLFEDSQEYRSIADDSFRKEIFE 771
                     RQ LADDF+++LY++K+IT +S+WEDCKPLFE++QEYRSI D+S+ +EIFE
Sbjct: 774  EKEEKEAKKRQRLADDFTNVLYTLKDITTTSEWEDCKPLFEETQEYRSIGDESYSREIFE 833

Query: 770  EYITLLQ 750
            EYIT L+
Sbjct: 834  EYITYLK 840



 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 57/269 (21%), Positives = 127/269 (47%), Gaps = 8/269 (2%)
 Frame = -3

Query: 2090 EDIANSVGGASVQ------DLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNA 1929
            E +A+ V  A  Q       ++E  +  AVA  T+ +  ++   D    +     E K+ 
Sbjct: 663  EHVADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFEDLEKQYHEDKSL 722

Query: 1928 FKALLESANVE--SDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERR 1755
             K  L+S  +   +   +E    V++ +     +  +   K  + E L + K+ + +E +
Sbjct: 723  IKDTLKSGKITVVTTSVFEDFKSVVLEEAACQKISEIN-LKLLYEELLERAKEKEEKEAK 781

Query: 1754 IKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQ 1575
             K++R  ++FT +L   +++T+++ W     +FE+ + Y+++      +++FE Y+  L+
Sbjct: 782  -KRQRLADDFTNVLYTLKDITTTSEWEDCKPLFEETQEYRSIGDESYSREIFEEYITYLK 840

Query: 1574 KKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 1395
            +K + K   + KR   + ++  E  +  K   + +K +DR  + E+     K D  +   
Sbjct: 841  EKAKEK---ERKREEEKAKKEREKEEKEKRKEKEKKEKDREREKEKSKERHKKDESDSDN 897

Query: 1394 EYIRDLEKEDEEQMKIQKEKLRRAERKNR 1308
            + + D     EE+ K +K+K R+  R+++
Sbjct: 898  QDMTDSHGYREEKKK-EKDKERKHRRRHQ 925


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  885 bits (2287), Expect = 0.0
 Identities = 472/851 (55%), Positives = 579/851 (68%), Gaps = 20/851 (2%)
 Frame = -3

Query: 3242 QNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQGISVSNVGXXXXXXXXXXXXXXXX 3063
            +N       QFRPV P Q  Q F+ S++QQF+  GQ IS SNVG                
Sbjct: 2    ENLSQSSGGQFRPVIPAQPGQAFISSSAQQFQLAGQNISSSNVGVPAGQVQPHQYPQSMP 61

Query: 3062 XXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXXXXXXN---HMPGVGGLGMPLSSS 2892
                R G P + TPSSQ I MP+V                     HM G+G  G+PLSS 
Sbjct: 62   QLVQRPGHPSYVTPSSQPIQMPYVQTRPLTSVPPQSQQNVAAPNNHMHGLGAHGLPLSSP 121

Query: 2891 YTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQHWSMTGSQNALPVTHVQQSGQQP 2712
            YTF P                  +SQMHAP    + Q W  + SQ    V+ + Q+ Q  
Sbjct: 122  YTFQP------------------MSQMHAPVSVGNSQPWLSSASQTTNLVSPIDQANQHS 163

Query: 2711 SVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPLELMTPIERAD 2532
            SV+A N PA+N  P  N Q SSDWQEH SADGRRYYYNKKT+QSSWEKPLELMTP+ERAD
Sbjct: 164  SVSAVN-PAANA-PVFNQQLSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERAD 221

Query: 2531 ASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLAREQAENMANHGIQSETALTSQSPG 2352
            ASTVWKEFT  +GRKYYYNK+TK+SKWT+P+ELKLAREQA+  A  G Q++ ++ +  P 
Sbjct: 222  ASTVWKEFTAPDGRKYYYNKVTKESKWTMPEELKLAREQAQKEATQGTQTDISVMAPQPT 281

Query: 2351 VVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDSQSIHSESSAVTMNAVGGHS 2172
            +   + +                               F S S +S S  VT ++    +
Sbjct: 282  LA--AGLSHAETPAISSVNSSISPTVSGVATSPVPVTPFVSVS-NSPSVMVTGSSAITGT 338

Query: 2171 PVAPVTPLPXXXXXXXXXXXTG-----------------ENIHTEDIANSVGGASVQDLE 2043
            P+A  T +             G                 E++ ++D+ N+V G S +D+E
Sbjct: 339  PIASTTSVSGTVSSQSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVDGTSTEDIE 398

Query: 2042 EAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWEQAMRV 1863
            EA+KGMAVAGK N T +EEK  DDEPLV+ANKQEAKNAFKALLES NV+SD +WEQAMR 
Sbjct: 399  EARKGMAVAGKVNETVLEEKSADDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMRE 458

Query: 1862 IINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSST 1683
            IINDKRYGALKTLGERKQAF+EYLG RKK DAEERRI+QK+AREEFTKMLEES+ELTSST
Sbjct: 459  IINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSST 518

Query: 1682 RWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLES 1503
            RWSKA++MFE+DER+KAVER RDR+DLFE+Y++EL++KE+ +A E+HK+NI EYR+FLES
Sbjct: 519  RWSKAVSMFENDERFKAVERSRDREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLES 578

Query: 1502 CDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRA 1323
            CD+IKV+SQWRKVQDRLEDDERCSRLEK+DRL IFQ+YIRDLEKE+E+Q KIQKE++RR 
Sbjct: 579  CDYIKVSSQWRKVQDRLEDDERCSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRRI 638

Query: 1322 ERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDLFEDVA 1143
            ERKNRDEFRKLMEEH+  G+ TAKT WRDYC+KVK+ P Y AV+SNTSGSTPKDLFEDV 
Sbjct: 639  ERKNRDEFRKLMEEHIAAGVFTAKTFWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVL 698

Query: 1142 EELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVSSPPISNTNLKLVFDELX 963
            E+LE +YHE+KT+IKD +K  +IT+ S+WT +DFKA+I +E  S  +S+ N KLV+++L 
Sbjct: 699  EDLENKYHEEKTQIKDVVKAAKITITSSWTFDDFKAAI-EESGSLAVSDINFKLVYEDLL 757

Query: 962  XXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPLFEDSQEYRSIADDSFRK 783
                         RQ LADDFS LL S+KEIT SS WED K LFE+S+EYRSI ++SF K
Sbjct: 758  ERAKEKEEKEAKRRQRLADDFSGLLQSLKEITTSSNWEDSKQLFEESEEYRSIGEESFAK 817

Query: 782  EIFEEYITLLQ 750
            E+FEE+IT LQ
Sbjct: 818  EVFEEHITHLQ 828



 Score = 64.7 bits (156), Expect = 3e-07
 Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 1/262 (0%)
 Frame = -3

Query: 2048 LEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWE-QA 1872
            ++E  +  AVA  T+ +  ++   D    +     E K   K ++++A +    SW    
Sbjct: 672  VKELPQYQAVASNTSGSTPKDLFEDVLEDLENKYHEEKTQIKDVVKAAKITITSSWTFDD 731

Query: 1871 MRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELT 1692
             +  I +   G+L       +   E L +R K   E+   +++R  ++F+ +L+  +E+T
Sbjct: 732  FKAAIEES--GSLAVSDINFKLVYEDLLERAKEKEEKEAKRRQRLADDFSGLLQSLKEIT 789

Query: 1691 SSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQF 1512
            +S+ W  +  +FE+ E Y+++      +++FE ++  LQ+K + K   + KR   + ++ 
Sbjct: 790  TSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEHITHLQEKAKEK---ERKREEEKAKKE 846

Query: 1511 LESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKL 1332
             E  +  K   + RK +DR  + E+  R++K +          D E  D     + +E  
Sbjct: 847  KEREEKEKRKEKERKEKDREREKEK-GRVKKDE---------TDSENVDVSDTHVYREDK 896

Query: 1331 RRAERKNRDEFRKLMEEHVTDG 1266
            +R + K+R + RK       DG
Sbjct: 897  KRDKDKDR-KHRKRHHSATDDG 917


>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
            subsp. vesca]
          Length = 990

 Score =  880 bits (2273), Expect = 0.0
 Identities = 478/875 (54%), Positives = 580/875 (66%), Gaps = 22/875 (2%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQG 3132
            MA+NPQSS AQ                      +RP+ P QQ Q F+   SQQF+P+GQG
Sbjct: 1    MANNPQSSAAQ----------------------YRPMVPAQQGQHFISPGSQQFQPVGQG 38

Query: 3131 ISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXX 2952
              +                        R  QPGH  PSSQ++PMP+              
Sbjct: 39   QPLQ-------------YSQQMQPYPLRPNQPGHAQPSSQALPMPYYQPRPVTSVPPHSQ 85

Query: 2951 XXXXN---HMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQ 2781
                     MPG     MP  SSY +A  SY Q QNN N+SSQ+Q +SQ  A  +P +GQ
Sbjct: 86   QPAPPFNNQMPG-----MPYPSSYMYAQPSYAQPQNNANSSSQFQPMSQDQAHGVPTAGQ 140

Query: 2780 HWSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYY 2601
             W  + S     VT  QQ  QQP+ T    PA N  PN    SSSDWQEH ++DGRRYY+
Sbjct: 141  PWMSSSSHQGAAVTPQQQPSQQPTSTPFPDPAVNA-PNLAQPSSSDWQEHMASDGRRYYF 199

Query: 2600 NKKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLAR 2421
            N+ TRQSSWEKPLELMTP+ERADASTVWKE+T+ +G+KYYYNK+T++SKWTIP+ELKLAR
Sbjct: 200  NRSTRQSSWEKPLELMTPLERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKLAR 259

Query: 2420 EQAENMANHGIQSETALTSQSPGVVTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2241
            EQA+     G QSE   TS +P   T S+                               
Sbjct: 260  EQAQREHTQGTQSEMTSTSHAPPA-TASAEIHAGASSVGPSTSSAQPGTVSSPVAVTPIS 318

Query: 2240 AFDSQSIHSES---------SAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXT------- 2109
            AF + S  + S         S++   +VG    V  V+PLP           T       
Sbjct: 319  AFSNPSPTTPSGLSVAPGVQSSMATGSVGVQPAVVNVSPLPASNVGSTGLPSTLVNTITK 378

Query: 2108 --GENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAK 1935
               EN   +D A+S+ GAS QD+EEAKKGMAVAGK NVTP EEK +DDEPLVYA+KQEAK
Sbjct: 379  SVNENQAPQDSASSIDGASSQDIEEAKKGMAVAGKVNVTPSEEKAIDDEPLVYASKQEAK 438

Query: 1934 NAFKALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERR 1755
            NAFK+LLESANV SD +WEQAMR IINDKRYGAL+TLGERKQAFNEYLGQRKK + EERR
Sbjct: 439  NAFKSLLESANVHSDWTWEQAMREIINDKRYGALRTLGERKQAFNEYLGQRKKLENEERR 498

Query: 1754 IKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQ 1575
            I+QKRAREEFTKMLEES+ELTS+ RWSKA+TMFE+DER+KAVER RDR+DL+E+Y++EL+
Sbjct: 499  IRQKRAREEFTKMLEESKELTSTIRWSKAVTMFENDERFKAVERARDREDLYESYIVELE 558

Query: 1574 KKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQ 1395
            +KE+  A E+H+RNI EY++FLESCDFIK    WRKVQDRLEDDERC RL+K DRL IFQ
Sbjct: 559  RKEKEIAAEEHRRNISEYKEFLESCDFIK----WRKVQDRLEDDERCLRLDKFDRLLIFQ 614

Query: 1394 EYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKD 1215
            ++IRDLEKE+EEQ KIQKE+LRR ERKNRDEFRK++EEH  DG LTAKT WRDYCMKVKD
Sbjct: 615  DHIRDLEKEEEEQKKIQKEQLRRIERKNRDEFRKILEEHAADGTLTAKTQWRDYCMKVKD 674

Query: 1214 SPAYMAVSSNTSG-STPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFK 1038
             P Y AV++NT G STPKDLFEDVAE+LEKQ+ EDK R+KDA+K G+IT+ S+WT E+FK
Sbjct: 675  LPQYEAVAANTHGSSTPKDLFEDVAEDLEKQFVEDKARVKDAMKQGQITMVSSWTFEEFK 734

Query: 1037 ASISDEVSSPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASS 858
            A++ +++  P IS  NLKL ++++              R  +ADDF  LL++ KEIT SS
Sbjct: 735  AAVVNDIGFPSISELNLKLAYEDILERAREKEEKEAKKRLRIADDFHKLLHTFKEITVSS 794

Query: 857  KWEDCKPLFEDSQEYRSIADDSFRKEIFEEYITLL 753
             WEDCK LFE++QEYRS+ D+ F +EIFEEYIT L
Sbjct: 795  SWEDCKQLFEETQEYRSVGDEDFGREIFEEYITSL 829



 Score = 65.9 bits (159), Expect = 1e-07
 Identities = 64/266 (24%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
 Frame = -3

Query: 2057 VQDLEEAKKGMAVAGKTN--VTP---MEEKKVDDEPLVYANKQEAKNAFKALLESANVES 1893
            V+DL + +   AVA  T+   TP    E+   D E     +K   K+A K       + S
Sbjct: 672  VKDLPQYE---AVAANTHGSSTPKDLFEDVAEDLEKQFVEDKARVKDAMKQ--GQITMVS 726

Query: 1892 DCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKML 1713
              ++E+    ++ND  + ++  L   K A+ + L + ++ + +E + K+ R  ++F K+L
Sbjct: 727  SWTFEEFKAAVVNDIGFPSISELN-LKLAYEDILERAREKEEKEAK-KRLRIADDFHKLL 784

Query: 1712 EESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRN 1533
               +E+T S+ W     +FE+ + Y++V      +++FE Y+  L ++ + K   + KR 
Sbjct: 785  HTFKEITVSSSWEDCKQLFEETQEYRSVGDEDFGREIFEEYITSLHERAKEK---ERKRE 841

Query: 1532 ILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDL--EKEDEE 1359
              + ++  E  +  K   + RK +DR  + E+     K D  +     + D    KED++
Sbjct: 842  EEKAKKEKEREEKEKRKDKERKEKDREREKEKGKERSKKDETDSETVDMTDSHDHKEDKK 901

Query: 1358 QMKIQKEKLRRAERKNRDEFRKLMEE 1281
            + K +  K R+  + + D+     EE
Sbjct: 902  REKDKDRKHRKRHQSSIDDVGSDKEE 927


>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
            lycopersicum]
          Length = 998

 Score =  880 bits (2273), Expect = 0.0
 Identities = 489/868 (56%), Positives = 576/868 (66%), Gaps = 14/868 (1%)
 Frame = -3

Query: 3311 MASNPQSSGAQPLRPPLVGSAGHQNFGPPMSMQFRPVAPQQQAQPFMP--SASQQFRPLG 3138
            MASNP  SG QPL PP VGS   Q FG    MQFRP    QQ Q F P  SAS Q+RP+G
Sbjct: 1    MASNPPPSGPQPLWPPSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVG 59

Query: 3137 QGISVSNVGXXXXXXXXXXXXXXXXXXXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXX 2958
            Q     N G                   PR GQPGHGTPSSQ+I M +            
Sbjct: 60   Q---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQPGHGTPSSQAIQMSY--NQSSISQPQQ 114

Query: 2957 XXXXXXNHMPGVGGLGMPLSSSYTFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQH 2778
                  +HMPGV G G P SSSYT                   Q  SQMH PT PA GQ 
Sbjct: 115  VNPPLNSHMPGVSGAGNPFSSSYTV------------------QSSSQMHGPTFPAGGQP 156

Query: 2777 WSMTGSQNALPVTHVQQSGQQPSVTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYN 2598
            W  +GSQ          S  Q    A  VPAS     ++ Q++SDWQE+ +ADGRRYYYN
Sbjct: 157  WLSSGSQTTPVGDPTPPSSHQLLAVAPAVPAST----ASQQTASDWQEYEAADGRRYYYN 212

Query: 2597 KKTRQSSWEKPLELMTPIERADASTVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLARE 2418
            K T+QSSWEKPLELMTP+ERADASTVWKEFTT +GRKYYYNK TKQSKWT+PDELKLARE
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTMPDELKLARE 272

Query: 2417 QAENMA----------NHGIQSETALTS-QSPGVVT-VSSVEXXXXXXXXXXXXXXXXXX 2274
             AEN+A          N G+Q   A+TS + P  VT VSS                    
Sbjct: 273  LAENVASQVVQTGTSTNSGVQVSEAVTSTEQPSAVTPVSSTPSSTVSGVPSSPVPVTPAV 332

Query: 2273 XXXXXXXXXXXAFDSQSIHSESSAVTMNAVGGHSPVAPVTPLPXXXXXXXXXXXTGENIH 2094
                          S +I + S AVT +A G  SP                   +G    
Sbjct: 333  SDVNTPPLVVSG--SSAIPTVSFAVTSSA-GISSPAVSGNTRSAALANAYQTQMSGIENL 389

Query: 2093 TEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALL 1914
            +  +A+S+ GAS QD+EEAKKGMAVAGK NV P EEK  D+EP +YA KQEAK+AFK+LL
Sbjct: 390  SPQVASSLSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKHAFKSLL 449

Query: 1913 ESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAR 1734
            ESA VESD +WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKK +AEERR++Q++A+
Sbjct: 450  ESATVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAK 509

Query: 1733 EEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKA 1554
            EEFTKMLEES+ELTSSTRWSKA+TMFEDDER+K VER  DR+DLF NYL++LQKKER KA
Sbjct: 510  EEFTKMLEESKELTSSTRWSKAVTMFEDDERFKGVEREADREDLFRNYLVDLQKKERSKA 569

Query: 1553 LEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 1374
             E+++RN LEY+QFLE+C FIKV++QWRKVQD LEDDERCSRLEK+DRL+IFQEYIRDLE
Sbjct: 570  QEEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLDIFQEYIRDLE 629

Query: 1373 KEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAV 1194
            KEDEEQ K+QKE+LRRAERKNRD FRK++EEH+  G+LTAKT+WRDY   VK+S AY AV
Sbjct: 630  KEDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTYWRDYWQMVKESVAYQAV 689

Query: 1193 SSNTSGSTPKDLFEDVAEELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVS 1014
            +SNTSGSTPKDLFEDV EELEKQYHEDK  +KD +K  +IT++ T T EDFK +I + +S
Sbjct: 690  ASNTSGSTPKDLFEDVTEELEKQYHEDKIHVKDVVKSEKITISPTCTFEDFKVAILEGIS 749

Query: 1013 SPPISNTNLKLVFDELXXXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPL 834
            SP I + NL+L+F++L              RQ LA DF+D L SIKEIT SS WE+ K L
Sbjct: 750  SPSIQDVNLQLIFEDLVERAKEKEEKEAKKRQRLAKDFTDKLSSIKEITDSSSWEESKEL 809

Query: 833  FEDSQEYRSIADDSFRKEIFEEYITLLQ 750
             EDS E+R+I +++  + +FEEY+  LQ
Sbjct: 810  VEDSSEFRAIGEETISRAVFEEYVAWLQ 837



 Score = 63.2 bits (152), Expect = 8e-07
 Identities = 62/279 (22%), Positives = 129/279 (46%)
 Frame = -3

Query: 2105 ENIHTEDIANSVGGASVQDLEEAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAF 1926
            E++  + +A++  G++ +DL E           +VT   EK+  ++      K   K+  
Sbjct: 682  ESVAYQAVASNTSGSTPKDLFE-----------DVTEELEKQYHED------KIHVKDVV 724

Query: 1925 KALLESANVESDCSWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQ 1746
            K+  E   +   C++E     I+      +++ +    Q   E L +R K   E+   K+
Sbjct: 725  KS--EKITISPTCTFEDFKVAILEGISSPSIQDVN--LQLIFEDLVERAKEKEEKEAKKR 780

Query: 1745 KRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKE 1566
            +R  ++FT  L   +E+T S+ W ++  + ED   ++A+      + +FE Y+  LQ+K 
Sbjct: 781  QRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFRAIGEETISRAVFEEYVAWLQEKA 840

Query: 1565 RVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYI 1386
            + K   + KR   + ++  E  +  K   + R+ +++  + E+  R ++  R +     I
Sbjct: 841  KEK---ERKREEEKVKKEKEKDEKEKRKDKERREKEKEREKEK-ERGKERSRKDEPDSVI 896

Query: 1385 RDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEEHVTD 1269
             D+ +  E + + ++EK R  ERK+R       +E  +D
Sbjct: 897  MDVTESFEHKEERKREKDR--ERKHRKRHHSSNDELTSD 933


>ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
            gi|561034404|gb|ESW32934.1| hypothetical protein
            PHAVU_001G029800g [Phaseolus vulgaris]
          Length = 1000

 Score =  878 bits (2269), Expect = 0.0
 Identities = 476/851 (55%), Positives = 570/851 (66%), Gaps = 21/851 (2%)
 Frame = -3

Query: 3239 NFGPPMSMQFRPVAPQQQAQPFMPSASQQFRPLGQGISVSNVGXXXXXXXXXXXXXXXXX 3060
            N   P SMQFRPV   QQ QPF+P  SQQF P G  I  SN G                 
Sbjct: 3    NNSQPSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQ 62

Query: 3059 XXPRTGQPGHGTPSSQSIPMPHVXXXXXXXXXXXXXXXXXN---HMPGVGGLGMPLSSSY 2889
              PR  QPGH  PSSQ IPMP++                     HMPG+   G    SSY
Sbjct: 63   LTPRPMQPGHLAPSSQPIPMPYIQTNRPMSSIPPHSQSVPPLSNHMPGLPVSGAAPHSSY 122

Query: 2888 TFAPSSYGQSQNNINASSQYQQISQMHAPTIPASGQHWSMTGSQNALPVTHVQQSGQQPS 2709
            TF PS YGQ  +N NA +QYQ   QM AP     GQ W  + SQ+  P T VQ +G Q S
Sbjct: 123  TFTPS-YGQQHDNANALAQYQHPPQMLAPP---GGQPWLSSASQSVAPSTSVQPAGLQSS 178

Query: 2708 VTAANVPASNVQPNSNTQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPLELMTPIERADA 2529
                    +N    +N  S SDWQEHTS DGRRYYYNK+TRQSSWEKPLELM+PIERADA
Sbjct: 179  GATLTDAVTNA---TNQHSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIERADA 235

Query: 2528 STVWKEFTTQEGRKYYYNKITKQSKWTIPDELKLAREQAENMANHGIQSETALTSQSPGV 2349
            STVWKEFT+ +G+KYYYNK+T+QS W+IP+EL+LAREQA+  AN G+QSET   S +P  
Sbjct: 236  STVWKEFTSSDGKKYYYNKVTQQSTWSIPEELQLAREQAQKAANQGMQSET---SDTPNA 292

Query: 2348 VTVSSVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDSQSIHS-------ESSAVTMN 2190
               S                                + DS  + S         S VT +
Sbjct: 293  AVSSIATSTATNAASLNPSLTSNGLASSPSSVTPIASTDSPQLVSGLFGTSVSQSTVTSS 352

Query: 2189 AVG------GHSPVAPV-----TPLPXXXXXXXXXXXTGENIHTEDIANSVGGASVQDLE 2043
              G      G +  AP+     + L              EN  ++D A S  G+S QD+E
Sbjct: 353  TTGVEPSSVGTTSAAPILVAGGSGLSENSPQLSKMPPIVENQASQDFA-SANGSSPQDIE 411

Query: 2042 EAKKGMAVAGKTNVTPMEEKKVDDEPLVYANKQEAKNAFKALLESANVESDCSWEQAMRV 1863
            EAKK +A  GK NV P EEK  DDE LVYANK EAKNAFKALLES NV+SD +WEQAMR 
Sbjct: 412  EAKKALAEVGKNNVIPPEEKTNDDETLVYANKLEAKNAFKALLESVNVQSDWTWEQAMRE 471

Query: 1862 IINDKRYGALKTLGERKQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSST 1683
            IINDKRY ALKTLGERKQAFNEYLGQRKK +AEERR+KQKRAREEFTKMLEE +ELTSS 
Sbjct: 472  IINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSM 531

Query: 1682 RWSKAITMFEDDERYKAVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLES 1503
            RWSKAI+MFE+DER+ AVERPRDR+DLFE+Y++EL++KE+  A E+H+RNI EYR+FLES
Sbjct: 532  RWSKAISMFENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRRNIAEYRKFLES 591

Query: 1502 CDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRA 1323
            CD++KVNS WRK+QDRLEDD+R  RLEKIDRL +FQ+YIRDLEKE+EEQ +IQK+++RR 
Sbjct: 592  CDYVKVNSHWRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQRRIQKDRVRRG 651

Query: 1322 ERKNRDEFRKLMEEHVTDGILTAKTHWRDYCMKVKDSPAYMAVSSNTSGSTPKDLFEDVA 1143
            ERKNRD FRKL+EEHV  GILTAKT WR+YC+KV+D P Y AV+SNT GSTPKDLFE VA
Sbjct: 652  ERKNRDAFRKLLEEHVATGILTAKTQWREYCLKVRDLPQYQAVASNTLGSTPKDLFELVA 711

Query: 1142 EELEKQYHEDKTRIKDALKLGRITLASTWTLEDFKASISDEVSSPPISNTNLKLVFDELX 963
            E+LEKQYHEDKT IKD +K G+I + +T   E+FKA++ ++V+   IS+ NLKL+F+EL 
Sbjct: 712  EDLEKQYHEDKTLIKDTIKSGKIIVVTTSVFEEFKAAVLEDVACQTISDINLKLIFEELL 771

Query: 962  XXXXXXXXXXXXXRQHLADDFSDLLYSIKEITASSKWEDCKPLFEDSQEYRSIADDSFRK 783
                         RQ LAD+F++LLY+ K+IT SSKWEDCK LFE++QEYRSI D+S+ +
Sbjct: 772  ERAKEKEEKEAKKRQRLADEFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGDESYSR 831

Query: 782  EIFEEYITLLQ 750
            EIFEEYIT L+
Sbjct: 832  EIFEEYITYLK 842



 Score = 62.8 bits (151), Expect = 1e-06
 Identities = 39/178 (21%), Positives = 94/178 (52%)
 Frame = -3

Query: 1814 KQAFNEYLGQRKKHDAEERRIKQKRAREEFTKMLEESRELTSSTRWSKAITMFEDDERYK 1635
            K  F E L + K+ + +E + K++R  +EFT +L   +++T+S++W    ++FE+ + Y+
Sbjct: 764  KLIFEELLERAKEKEEKEAK-KRQRLADEFTNLLYTFKDITTSSKWEDCKSLFEETQEYR 822

Query: 1634 AVERPRDRQDLFENYLIELQKKERVKALEDHKRNILEYRQFLESCDFIKVNSQWRKVQDR 1455
            ++      +++FE Y+  L++K + K  +  +  + + ++  E     K   + +K +DR
Sbjct: 823  SIGDESYSREIFEEYITYLKEKAKEKERKREEEKVKKEKEREE-----KRKEKEKKEKDR 877

Query: 1454 LEDDERCSRLEKIDRLEIFQEYIRDLEKEDEEQMKIQKEKLRRAERKNRDEFRKLMEE 1281
              + ++     + D  +   + + ++    EE+ K +K+K    ERK+R   +  +++
Sbjct: 878  EREKDKSKERHRKDETDSDNQDMTEVHGYKEEKKK-EKDK----ERKHRKRHQSSLDD 930