BLASTX nr result

ID: Akebia24_contig00004435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00004435
         (464 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298288.1| hypothetical protein POPTR_0001s22780g [Popu...    57   3e-06

>ref|XP_002298288.1| hypothetical protein POPTR_0001s22780g [Populus trichocarpa]
           gi|222845546|gb|EEE83093.1| hypothetical protein
           POPTR_0001s22780g [Populus trichocarpa]
          Length = 419

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/82 (43%), Positives = 40/82 (48%)
 Frame = +3

Query: 15  GTSLNHTGLSPSIASGVLPMVNRSGATAPVGLGTSGVSPYANQSGATPPVGLGVAFGARP 194
           G  LN TGLSP    GV   +NR G   P                    +GLG  F  + 
Sbjct: 331 GGMLNQTGLSPLFPGGVSQPLNRVGNVGP-------------------SIGLGAGFTTQH 371

Query: 195 AINTISPSVIGSYGSQAALQGL 260
            INTIS S+IGSY SQAALQGL
Sbjct: 372 GINTISNSMIGSYNSQAALQGL 393


Top