BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00004402
         (2152 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276969.1| PREDICTED: transcription initiation factor T...   797   0.0  
ref|XP_007215640.1| hypothetical protein PRUPE_ppa003876mg [Prun...   792   0.0  
emb|CBI26708.3| unnamed protein product [Vitis vinifera]              791   0.0  
ref|XP_002264290.1| PREDICTED: transcription initiation factor T...   778   0.0  
ref|XP_004294395.1| PREDICTED: transcription initiation factor T...   775   0.0  
ref|XP_007020675.1| Transcription initiation factor tfiid, putat...   768   0.0  
ref|XP_004304060.1| PREDICTED: transcription initiation factor T...   756   0.0  
ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group] g...   750   0.0  
ref|XP_004968859.1| PREDICTED: transcription initiation factor T...   750   0.0  
ref|XP_006644218.1| PREDICTED: transcription initiation factor T...   747   0.0  
ref|XP_002320500.1| TATA box-binding protein-associated factor [...   746   0.0  
gb|ACL54361.1| unknown [Zea mays] gi|413956299|gb|AFW88948.1| pu...   745   0.0  
ref|XP_006839099.1| hypothetical protein AMTR_s00090p00135570 [A...   744   0.0  
ref|XP_002298845.1| hypothetical protein POPTR_0001s37010g [Popu...   742   0.0  
ref|XP_006447692.1| hypothetical protein CICLE_v10014827mg [Citr...   741   0.0  
ref|XP_006375548.1| hypothetical protein POPTR_0014s15940g [Popu...   740   0.0  
ref|XP_003577929.1| PREDICTED: transcription initiation factor T...   739   0.0  
ref|XP_003518649.1| PREDICTED: transcription initiation factor T...   737   0.0  
dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]    737   0.0  
gb|EMT21817.1| Transcription initiation factor TFIID subunit 6 [...   735   0.0  

>ref|XP_002276969.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Vitis vinifera]
          Length = 543

 Score =  797 bits (2058), Expect = 0.0
 Identities = 407/547 (74%), Positives = 449/547 (82%), Gaps = 2/547 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQSIGISN SPDVA ALA DVEYRVREIMQEAIKCMRHSKRTILT +D
Sbjct: 1    MSIVPKETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVND 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL LRNVEP+YGFTSG    FKRA GHKDLFY+DDKDVEFKD+IEAPLPK PLDT V
Sbjct: 61   VDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            + HWLAIEGVQPAI ENAP+EAL VPSDNKKSE+K+DG PVD KLPVKHVLSRELQLYFD
Sbjct: 121  ITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPVKHVLSRELQLYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KI ELTLSRSDS+LFKEALVSLATDSG+HPLVPYFTYFIADEVTR+LNDF +LFALMRV 
Sbjct: 181  KIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNLNDFSILFALMRVA 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
            RSLLQNQ IHIEPYLHQLMPS+ITCLVAKRLG+RFSDNHWELR+F ANLVAS+CKR+GHV
Sbjct: 241  RSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTANLVASVCKRYGHV 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            YHNLQPRVTRTLLHAFLDPTKA+ QHYGAI+GLAA GPSV+RLLILPNLE Y        
Sbjct: 301  YHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILPNLEPYLRLLEPEM 360

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKN MKRHEAWRVYGALLCAAG CMYDRLK FP LL+PP R + ++N +I+ T P+
Sbjct: 361  QLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPS 420

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTT--XXXXXXXXXXXX 462
            KRKAS +NLMQQPPLKK+A DG +G +P  ++  D Q     F T+              
Sbjct: 421  KRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGLSSMS 480

Query: 461  XXXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPS 282
                +E+ISGG   R +V  RA + SAVL QAWK D++AG L ASLFE FGE +  FTPS
Sbjct: 481  QQLASENISGG---RREVGTRALKASAVLAQAWK-DVNAGQLSASLFEYFGESMFCFTPS 536

Query: 281  AEMSFFL 261
             E+S FL
Sbjct: 537  PELSLFL 543


>ref|XP_007215640.1| hypothetical protein PRUPE_ppa003876mg [Prunus persica]
            gi|462411790|gb|EMJ16839.1| hypothetical protein
            PRUPE_ppa003876mg [Prunus persica]
          Length = 543

 Score =  792 bits (2046), Expect = 0.0
 Identities = 394/545 (72%), Positives = 452/545 (82%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKE +EVIAQSIGI+NLSPDVALALAPDVEYR+RE+MQEAIKCMRHS+RT LTADD
Sbjct: 1    MSIVPKENVEVIAQSIGINNLSPDVALALAPDVEYRLREVMQEAIKCMRHSRRTRLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD ALNLRNVEPIYG+ SG  L FKRA+GH+DLFYIDDKDVEFKDVIEAPLPKAPLDT +
Sbjct: 61   VDGALNLRNVEPIYGYVSGGPLRFKRAIGHRDLFYIDDKDVEFKDVIEAPLPKAPLDTGI 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            V HWLAIEGVQPAIPENAPVE L  PSD+KK E KDDG PVDIKLPVKH+LSRELQLYFD
Sbjct: 121  VCHWLAIEGVQPAIPENAPVEVLAAPSDSKKYEQKDDGIPVDIKLPVKHILSRELQLYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KITEL +SRSD V+FKEALVSLATDSGLHPLVPYFT FIADEV+R LND+PLLFALMRVV
Sbjct: 181  KITELVVSRSDLVIFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNDYPLLFALMRVV 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
            RSLLQN H+HIEPYLHQLMPSV+TCLVAKRLGNRF+DNHWELR+F ANLVASICKRFGHV
Sbjct: 241  RSLLQNPHMHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGHV 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y+ LQ R+T+TL++AFLDP + +TQHYGAI+GLAALGPSV+RLL+LPNLE+Y        
Sbjct: 301  YNTLQSRLTKTLVNAFLDPKRTLTQHYGAIQGLAALGPSVVRLLVLPNLETYLRLLEPEL 360

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNEMKRHEAWRVYGALL AAGQC+YDRLK+FP L +P  ++ W  + R++ TMPN
Sbjct: 361  LLDKQKNEMKRHEAWRVYGALLNAAGQCIYDRLKMFPLLPSPAPQSFWSTSQRVI-TMPN 419

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRK S+E++ +QPPLKKIA DGP G +PT + P+ M+V     P                
Sbjct: 420  KRKGSVEHMEEQPPLKKIATDGPTGLVPTNSSPSHMEVEI-ATPAPSGDPDAAPPSSSGQ 478

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
              NE +S   SRR++  GR+ + SA+LTQ WK+D+++GHLL SLFELFGE IL+F P+ E
Sbjct: 479  MPNEGVSNSRSRRDRASGRSLKKSALLTQVWKDDLNSGHLLVSLFELFGEDILSFVPAPE 538

Query: 275  MSFFL 261
            M  FL
Sbjct: 539  MCLFL 543


>emb|CBI26708.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  791 bits (2042), Expect = 0.0
 Identities = 407/551 (73%), Positives = 448/551 (81%), Gaps = 6/551 (1%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQSIGISN SPDVA ALA DVEYRVREIMQEAIKCMRHSKRTILT +D
Sbjct: 1    MSIVPKETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVND 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL LRNVEP+YGFTSG    FKRA GHKDLFY+DDKDVEFKD+IEAPLPK PLDT V
Sbjct: 61   VDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            + HWLAIEGVQPAI ENAP+EAL VPSDNKKSE+K+DG PVD KLPVKHVLSRELQLYFD
Sbjct: 121  ITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPVKHVLSRELQLYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KI ELTLSRSDS+LFKEALVSLATDSG+HPLVPYFTYFIADEVTR+LNDF +LFALMRV 
Sbjct: 181  KIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNLNDFSILFALMRVA 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
            RSLLQNQ IHIEPYLHQLMPS+ITCLVAKRLG+RFSDNHWELR+F ANLVAS+CKR+GHV
Sbjct: 241  RSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTANLVASVCKRYGHV 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            YHNLQPRVTRTLLHAFLDPTKA+ QHYGAI+GLAA GPSV+RLLILPNLE Y        
Sbjct: 301  YHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILPNLEPYLRLLEPEM 360

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTM-- 642
                QKN MKRHEAWRVYGALLCAAG CMYDRLK FP LL+PP R + ++N +I+ T   
Sbjct: 361  QLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPK 420

Query: 641  --PNKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTT--XXXXXXXX 474
              P KRKAS +NLMQQPPLKK+A DG +G +P  ++  D Q     F T+          
Sbjct: 421  INPGKRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGL 480

Query: 473  XXXXXXXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILA 294
                    +E+ISGG   R +V  RA + SAVL QAWK D++AG L ASLFE FGE +  
Sbjct: 481  SSMSQQLASENISGG---RREVGTRALKASAVLAQAWK-DVNAGQLSASLFEYFGESMFC 536

Query: 293  FTPSAEMSFFL 261
            FTPS E+S FL
Sbjct: 537  FTPSPELSLFL 547


>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
            vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
            product [Vitis vinifera]
          Length = 543

 Score =  778 bits (2008), Expect = 0.0
 Identities = 395/545 (72%), Positives = 448/545 (82%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIV KETIEVIAQSIGI+NLS DVALALAPDVEYR+RE+MQEAIKCMRHSKRT+LT DD
Sbjct: 1    MSIVSKETIEVIAQSIGIANLSADVALALAPDVEYRMREVMQEAIKCMRHSKRTVLTTDD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD ALNLRNVEPIYGFTSG  L FKRAVGHK+LFYIDDKD++FKDVIEAPLPKAPLD AV
Sbjct: 61   VDIALNLRNVEPIYGFTSGGPLRFKRAVGHKNLFYIDDKDLDFKDVIEAPLPKAPLDAAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            V HWLAIEGVQPAIPENAPVE +  PSD KK E KDDG PVDIKLP+KHVLSRELQLYFD
Sbjct: 121  VCHWLAIEGVQPAIPENAPVEVIAAPSDGKKFEQKDDGLPVDIKLPIKHVLSRELQLYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KI +LT++RSDS LFKEALVSLATDSGLHPLVPYFTYFI+DEV+R LNDF LLFALMRVV
Sbjct: 181  KIIDLTVNRSDSALFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDFNLLFALMRVV 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             SLLQN HIHIEPYLHQLMPSV+TCLVAKR+GNR +DNHWELR+F ANLVASICKRFGHV
Sbjct: 241  WSLLQNPHIHIEPYLHQLMPSVVTCLVAKRIGNRLADNHWELRDFTANLVASICKRFGHV 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y+NLQ R+T+TLLHAFLDP ++MTQHYGAI+GLAALGP+++RLLI+PNLE Y        
Sbjct: 301  YNNLQTRLTKTLLHAFLDPKRSMTQHYGAIQGLAALGPNMVRLLIVPNLEPYLRLLEPEM 360

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNE+KRHEAW VYGALL A GQ +YDRLK+FP L +PPAR V+R NGR+VT+ PN
Sbjct: 361  LLEKQKNELKRHEAWCVYGALLRATGQSIYDRLKMFPALPSPPAR-VFRTNGRVVTSPPN 419

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRKA+ E+L QQP LKKIA DGP+  +PT  + ++MQ    + P                
Sbjct: 420  KRKANNEHLEQQPSLKKIATDGPMDVVPT-NLSSNMQPPETKGPVPSTDPDMGPSSSSRQ 478

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
              + +IS    R+ K + RA +MSAVLTQ W++D+ +GHLL SLFELFGE IL F P+ E
Sbjct: 479  IPHGNISDSRDRKGKGDSRALKMSAVLTQTWRDDLKSGHLLVSLFELFGESILPFIPAPE 538

Query: 275  MSFFL 261
            MS FL
Sbjct: 539  MSLFL 543


>ref|XP_004294395.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Fragaria vesca subsp. vesca]
          Length = 538

 Score =  775 bits (2001), Expect = 0.0
 Identities = 398/545 (73%), Positives = 441/545 (80%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MS VPKE IEVIAQSIGI+NLSPDVALAL PDVEYRVREIMQEAIKCMRHS+RTILT DD
Sbjct: 1    MSNVPKEAIEVIAQSIGITNLSPDVALALTPDVEYRVREIMQEAIKCMRHSRRTILTTDD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD AL LRNVEPIYGF SGD L FKRA GH+DLFYIDDKDVEFKDVIEAPLPKAP D +V
Sbjct: 61   VDGALKLRNVEPIYGFASGDPLRFKRAAGHRDLFYIDDKDVEFKDVIEAPLPKAPFDVSV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
             AHWLAIEGVQPAIPENAPVEAL V SD KKSE+K+DG PVD+KLPVKHVLS+ELQLYF+
Sbjct: 121  AAHWLAIEGVQPAIPENAPVEALAVYSDVKKSEYKEDGLPVDVKLPVKHVLSKELQLYFE 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KIT LT  RS S LFKEAL+SLATDSGLHPLVPYFT F+ADEVTR+LN+F  LFALMR+V
Sbjct: 181  KITGLT-QRSSSTLFKEALMSLATDSGLHPLVPYFTCFVADEVTRNLNNFLYLFALMRLV 239

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
            RSLLQN HIH+EPYLHQLMPSVITCLVAKRLGNR++DNHWELRNF ANLV+SICKRFGHV
Sbjct: 240  RSLLQNPHIHVEPYLHQLMPSVITCLVAKRLGNRYTDNHWELRNFTANLVSSICKRFGHV 299

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            YHNLQPR+TRTLLHAFLDP KA+ QHYGAI+GLAALGP+V+RLLILPNL+SY        
Sbjct: 300  YHNLQPRLTRTLLHAFLDPNKALPQHYGAIQGLAALGPNVVRLLILPNLDSYMQLLEPEM 359

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNE+KRHEAWRVYGALL AAGQCM+DRLK F  LL+ PA  VW+ NG+I TTM N
Sbjct: 360  ILEKQKNEIKRHEAWRVYGALLRAAGQCMHDRLKKFHSLLS-PAHLVWKRNGKIATTMTN 418

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRKAS +NLM QPPLKK+A DG +GALP  +M  DMQ  A  F  +              
Sbjct: 419  KRKASTDNLMLQPPLKKLAHDGMVGALPMNSMQVDMQGAAGGFTASAGSLNVGVSSMSHQ 478

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
               E +SG       V G+  + S  L QAWKE+ D GH++ASLFE FGE +  FTP +E
Sbjct: 479  LPMEQMSG-----RDVSGQMVKGSTGLAQAWKEETDVGHVVASLFEHFGESVFPFTPKSE 533

Query: 275  MSFFL 261
            +SFFL
Sbjct: 534  LSFFL 538


>ref|XP_007020675.1| Transcription initiation factor tfiid, putative [Theobroma cacao]
            gi|508720303|gb|EOY12200.1| Transcription initiation
            factor tfiid, putative [Theobroma cacao]
          Length = 535

 Score =  768 bits (1983), Expect = 0.0
 Identities = 392/545 (71%), Positives = 442/545 (81%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MS VPKE IEV+AQSIGI+NLSPDVALALAPDVEYRVREIMQEAIKCMRHS+RT+LTADD
Sbjct: 1    MSNVPKEAIEVVAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD+ALNLRNVEPIYGF S D L FKRA GHKDLFYIDDKDVEFK+VIEAPL KAPL+T+V
Sbjct: 61   VDNALNLRNVEPIYGFASRDPLRFKRAAGHKDLFYIDDKDVEFKEVIEAPLSKAPLETSV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
             +HWLAIE VQPAIPENA VEA   PSD K++EHK+DG  VD+KLPVKHVLSR+LQLYF+
Sbjct: 121  TSHWLAIESVQPAIPENASVEA---PSDGKRAEHKEDGLSVDVKLPVKHVLSRDLQLYFE 177

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KI ELTL+RS SV+F  AL+SLATD G+HPL PYFTYFI DEV R+LN+F LLFALMRV 
Sbjct: 178  KIVELTLNRSVSVVFNRALLSLATDPGVHPLTPYFTYFITDEVARNLNNFRLLFALMRVA 237

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             SL+QN++IHIEPYLHQLMPSVITCLVAKRLGN+F+DNHWELRNFAA LVASICKRFGHV
Sbjct: 238  WSLVQNENIHIEPYLHQLMPSVITCLVAKRLGNKFTDNHWELRNFAAKLVASICKRFGHV 297

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            YHNLQPRVTRTLLHAFLDPTK + QHYGA++GLAALGPSV+RLLILPNLE+Y        
Sbjct: 298  YHNLQPRVTRTLLHAFLDPTKTLPQHYGALRGLAALGPSVVRLLILPNLEAYLQLLEPEM 357

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNE+KRHEAW VYGALL AAG CMYDRLK+FPGLLAPP R VW+++G++VT   N
Sbjct: 358  QPEKQKNEIKRHEAWCVYGALLRAAGLCMYDRLKMFPGLLAPPNRPVWKSSGKVVTR--N 415

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRKAS +NLMQQPPLKK+A D   G +P  +M  DMQ     F  T              
Sbjct: 416  KRKASTDNLMQQPPLKKMATDSASGMMPINSMQVDMQGAVGGFSATMGGSNIGVSSISRQ 475

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
              N++ISG      +  GR  + S VL QAWKED  AG+LLASLFELFGE +L+FTP  E
Sbjct: 476  LSNDNISG-----REASGRVLKTSTVLAQAWKEDTHAGNLLASLFELFGESMLSFTPKPE 530

Query: 275  MSFFL 261
            +S FL
Sbjct: 531  LSIFL 535


>ref|XP_004304060.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Fragaria vesca subsp. vesca]
          Length = 542

 Score =  756 bits (1952), Expect = 0.0
 Identities = 383/545 (70%), Positives = 438/545 (80%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKE IEVI+QSIGI+NLSPDVALALAPDVEYR+REIMQEAIKCMRHS+RT LTADD
Sbjct: 1    MSIVPKENIEVISQSIGINNLSPDVALALAPDVEYRLREIMQEAIKCMRHSRRTKLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD ALNLRNVEP+YGF SG  L FK+AVGH+DLFYIDDKDV+FKDVIEAPLPKAPLDT +
Sbjct: 61   VDGALNLRNVEPLYGFVSGGPLRFKKAVGHRDLFYIDDKDVDFKDVIEAPLPKAPLDTGL 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            + HWLAIEGVQPAIPENAPVE L  PSD KK E KDDG PV++KLPVKHVLSRELQLYFD
Sbjct: 121  LCHWLAIEGVQPAIPENAPVEVLTAPSDGKKYEQKDDGLPVELKLPVKHVLSRELQLYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KITEL + RSD +L K+AL+SLATDSGLHPLVPYFT FIADEV+R L+D+PLLFALMRVV
Sbjct: 181  KITELVVGRSDDILLKKALLSLATDSGLHPLVPYFTCFIADEVSRGLSDYPLLFALMRVV 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             SLLQN HIHIEPYLHQLMPSV+TCLVAKRLGNRF+DNHWELR+F ANLVASICKRFG V
Sbjct: 241  HSLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRFADNHWELRDFTANLVASICKRFGRV 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y+ LQ R+T+TL++AFLDP + +TQHYGAI+GLAALGPSV+ LLILPNLESY        
Sbjct: 301  YNTLQSRLTKTLVNAFLDPKRTLTQHYGAIQGLAALGPSVVHLLILPNLESYLRLLEPEL 360

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNE+KRHEAWRVYGALL AAGQC+YD+LK+FP L +P  +++W+ N RIV T PN
Sbjct: 361  LLEKQKNEIKRHEAWRVYGALLGAAGQCIYDKLKIFPTLPSPVPQSLWKTNERIVLTTPN 420

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRK S+E + QQPP KKIA DGP G   T + P+ MQV     P                
Sbjct: 421  KRKRSVEPMEQQPPSKKIATDGPTGL--TNSSPSPMQVDT-AAPAPSGDTNKVPSSSSTS 477

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
              NESIS    R    + ++ + SAVL Q WK+++++G LL SLF+LFGE IL F P+ E
Sbjct: 478  LSNESISNSRGRSNGADAQSLKKSAVLNQVWKDELNSGKLLVSLFQLFGEDILPFIPAPE 537

Query: 275  MSFFL 261
            MS FL
Sbjct: 538  MSLFL 542


>ref|NP_001043168.1| Os01g0510800 [Oryza sativa Japonica Group]
            gi|20804496|dbj|BAB92191.1| putative TAF6 [Oryza sativa
            Japonica Group] gi|113532699|dbj|BAF05082.1| Os01g0510800
            [Oryza sativa Japonica Group]
            gi|215768003|dbj|BAH00232.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222618539|gb|EEE54671.1|
            hypothetical protein OsJ_01969 [Oryza sativa Japonica
            Group]
          Length = 541

 Score =  750 bits (1937), Expect = 0.0
 Identities = 371/546 (67%), Positives = 441/546 (80%), Gaps = 1/546 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVI QS+GI+NL  DV+ ALAPDVEYR+REIMQEAIKCMRH+KRT+LTADD
Sbjct: 1    MSIVPKETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEP+YGF SGD L FKRAVGHKDLFYIDD++V+FK++IEAPLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEH-KDDGPPVDIKLPVKHVLSRELQLYF 1359
            VAHWLAIEGVQPAIPEN PV+A+V P++NK++EH KDDG PVDIKLPVKHVLSRELQ+YF
Sbjct: 121  VAHWLAIEGVQPAIPENPPVDAIVAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYF 180

Query: 1358 DKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRV 1179
            DKI ELT+SRS++ +F+EALVSL+ DSGLHPLVPYF+YFIADEVTRSL D P+LFALMRV
Sbjct: 181  DKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLPVLFALMRV 240

Query: 1178 VRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGH 999
            V+SLL N HIHIEPYLHQLMPS+ITC+VAKRLG+R SDNHWELR+F+ANLV S+C+RFGH
Sbjct: 241  VQSLLHNPHIHIEPYLHQLMPSIITCMVAKRLGHRLSDNHWELRDFSANLVGSVCRRFGH 300

Query: 998  VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXX 819
             YHN+Q RVTRTL+  FLDP K++TQHYGAI+G++ALGPS IRLL+LPNLE+Y       
Sbjct: 301  AYHNIQTRVTRTLVQGFLDPQKSLTQHYGAIQGISALGPSAIRLLLLPNLETYMQLLEPE 360

Query: 818  XXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP 639
                 QKNEMKR EAWRVYGALLCAAG+C+YDRLKLFP LL+P  R + R+N R+VT  P
Sbjct: 361  LQLDKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNP 420

Query: 638  NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXX 459
            NKRK+S +    QPPLKK+  DG + ++ +  MP  M   + + P               
Sbjct: 421  NKRKSSTDLSTSQPPLKKMTTDGAMNSMTSAPMPGTMDGFSTQLPNPSMTQTSSSGQLV- 479

Query: 458  XXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSA 279
                ES + G  RR++      R+S VL  AWKED +AGHLL+SL+E+FGE I +F    
Sbjct: 480  ----ESTASGVIRRDQGSNHTQRVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPP 535

Query: 278  EMSFFL 261
            E+SFFL
Sbjct: 536  EISFFL 541


>ref|XP_004968859.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Setaria italica]
          Length = 540

 Score =  750 bits (1937), Expect = 0.0
 Identities = 376/546 (68%), Positives = 444/546 (81%), Gaps = 1/546 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQS+GI +L PDVA ALAPDVEYR+REIMQE+IKCMRH+KRT+LTADD
Sbjct: 1    MSIVPKETIEVIAQSVGIPSLGPDVAAALAPDVEYRLREIMQESIKCMRHAKRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEP+YGF SGD L FKRAVGHKDLFY+DD++V+FK++IEAPLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEIIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEH-KDDGPPVDIKLPVKHVLSRELQLYF 1359
            VAHWLAIEGVQPAIPEN P++A+V P++NK+SEH KDDG PVD+KLPVKHVLSRELQ+YF
Sbjct: 121  VAHWLAIEGVQPAIPENPPIDAIVPPAENKRSEHGKDDGLPVDVKLPVKHVLSRELQMYF 180

Query: 1358 DKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRV 1179
            DKI ELTLSRSD+ LFKEALVSLA DSGLHPLVPYF+YF+ADEVTRSL D P+LFALMRV
Sbjct: 181  DKIAELTLSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFVADEVTRSLGDLPVLFALMRV 240

Query: 1178 VRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGH 999
            VRSLL N HIHIEPYLHQLMPS+ITC+VAKRLG+R SDNHWELR+F+ANLVA +C+RFGH
Sbjct: 241  VRSLLHNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVALVCRRFGH 300

Query: 998  VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXX 819
            VYHNLQ R+T+TL+HAFLDP K++TQHYGA++G++ALGPS IRLL+LPNL +Y       
Sbjct: 301  VYHNLQTRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLLPNLVTYMQLLEPE 360

Query: 818  XXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP 639
                 QKNEMKR EAWRVYGALLCAAG+C+YDRLKLFP LL+P  R + R++ R++T  P
Sbjct: 361  LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPVLLSPSTRPLLRSDKRVLTNNP 420

Query: 638  NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXX 459
            NKRK+S +    QPPLKK+A D  +      +M  +MQ   D F +T             
Sbjct: 421  NKRKSSTDLSASQPPLKKMATDASVN-----SMAGNMQGAMDGF-STQLGNPSMMQASSS 474

Query: 458  XXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSA 279
              + ESI     RR++    A ++S VL QAWKED DAGHLL SL+E+FGE I +F    
Sbjct: 475  GQLVESIPSAVIRRDQGSDLAQKVSTVLRQAWKEDQDAGHLLGSLYEVFGEAIFSFVQPP 534

Query: 278  EMSFFL 261
            EMS F+
Sbjct: 535  EMSLFV 540


>ref|XP_006644218.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Oryza brachyantha]
          Length = 544

 Score =  747 bits (1929), Expect = 0.0
 Identities = 371/546 (67%), Positives = 448/546 (82%), Gaps = 1/546 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQS+GI+NL  DV+ A+APDVEYR+REIMQEAIKCMRH+KRTILTADD
Sbjct: 1    MSIVPKETIEVIAQSVGIANLPADVSAAVAPDVEYRLREIMQEAIKCMRHAKRTILTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEP+YGF SGD L FKRAVGHKDLFY+DD++V+FK++IEAPLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYVDDREVDFKEIIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEH-KDDGPPVDIKLPVKHVLSRELQLYF 1359
            VAHWLAIEGVQPAIPEN PV+A++ P++NK++EH KDDG PVDIKLPVKHVLSRELQ+YF
Sbjct: 121  VAHWLAIEGVQPAIPENPPVDAIIAPTENKRTEHGKDDGLPVDIKLPVKHVLSRELQMYF 180

Query: 1358 DKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRV 1179
            DKI ELT+SRS++ +F+EALVSL+ DSGLHPLVPYF+YFIADEVTRSL D  +LFALMRV
Sbjct: 181  DKIAELTMSRSETSVFREALVSLSRDSGLHPLVPYFSYFIADEVTRSLGDLTVLFALMRV 240

Query: 1178 VRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGH 999
            V+SLL N HIHIEPYLHQLMPS+ITC+VAKRLG+R SDNHW+LR+F+ANLVAS+C+RFGH
Sbjct: 241  VQSLLHNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWDLRDFSANLVASVCRRFGH 300

Query: 998  VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXX 819
            VYHNLQ R+T+TL+HAFLDP K++TQHYGA++G++ALGPS IRLL+LPNLE+Y       
Sbjct: 301  VYHNLQTRLTKTLIHAFLDPQKSLTQHYGAVQGISALGPSAIRLLLLPNLETYMQLLEPE 360

Query: 818  XXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP 639
                 QKNEMKR EAWRVYGALLCAAG+C+YDRLKLFP LL+P  R + R+N R+VT  P
Sbjct: 361  LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPNLLSPSTRPLLRSNKRVVTNNP 420

Query: 638  NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXX 459
            NKRK+S +    QPPLKK+A DG + ++ +  M  +M  T D F +T             
Sbjct: 421  NKRKSSSDLSASQPPLKKMATDGAMNSMASAPM-QNMPGTMDGF-STQLPNPSMMQASSS 478

Query: 458  XXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSA 279
              + ES + G  RR++      ++S VL  AWKED +AGHLL+SL+E+FGE I +F    
Sbjct: 479  GQLVESTASGVIRRDQGSNHPQKVSTVLRLAWKEDQNAGHLLSSLYEVFGEAIFSFVQPP 538

Query: 278  EMSFFL 261
            E+S FL
Sbjct: 539  EISLFL 544


>ref|XP_002320500.1| TATA box-binding protein-associated factor [Populus trichocarpa]
            gi|222861273|gb|EEE98815.1| TATA box-binding
            protein-associated factor [Populus trichocarpa]
          Length = 532

 Score =  746 bits (1925), Expect = 0.0
 Identities = 382/545 (70%), Positives = 440/545 (80%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIV KETIEVIAQSIGISNLS DVAL LAPDVE+R+R+IMQEAIKCMRHSKRT LT DD
Sbjct: 1    MSIVAKETIEVIAQSIGISNLSEDVALTLAPDVEFRMRQIMQEAIKCMRHSKRTRLTTDD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD ALNL NVEPIYGF SG  L FKRA+GH+DLFY+DDKD++FKDVIEAPLPKAPLDTAV
Sbjct: 61   VDGALNLTNVEPIYGFASGGALQFKRAIGHRDLFYVDDKDIDFKDVIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            V HWLAIEGVQPAIPENAP+E +  PSD K SE  D+ P VDIKLPVKHVLSRELQLYFD
Sbjct: 121  VCHWLAIEGVQPAIPENAPLEVIAPPSDGKISEQNDEFP-VDIKLPVKHVLSRELQLYFD 179

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KIT+LT+ RSDSVLFKEALVSLATDSGLHPL+PYFTYFIADEV R LND+ LLFALMRVV
Sbjct: 180  KITDLTVRRSDSVLFKEALVSLATDSGLHPLIPYFTYFIADEVARGLNDYSLLFALMRVV 239

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             SLLQN HIHIEPYLHQLMPSV+TCLVA++LGNRF+DNHWELR+F ANLVASICKRFGHV
Sbjct: 240  WSLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNHWELRDFTANLVASICKRFGHV 299

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y++LQ R+T+TLL+A LDP +++TQHYGAI+GLAALGP+V+RLL+LPNL+ Y        
Sbjct: 300  YNSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLKPYLQLLEPEM 359

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNEMKRHEAW VYGALLCAAGQ +YDRLK+FP L++ PA  V R N ++VT  P+
Sbjct: 360  LLEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKMFPALMSHPACAVLRTNEKVVTKRPD 419

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRKASME+ M+QPP KKIA DGP+          DMQV     P                
Sbjct: 420  KRKASMEH-MEQPPPKKIATDGPV----------DMQVEPIA-PVPLGDSKTGLSTSSEH 467

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
              N S +G  ++++K + +A + SA+L+Q WK+D+++GHLL SLFELFGE IL+F PS E
Sbjct: 468  TPNYSEAGSRNQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPSPE 527

Query: 275  MSFFL 261
            MS FL
Sbjct: 528  MSLFL 532


>gb|ACL54361.1| unknown [Zea mays] gi|413956299|gb|AFW88948.1| putative TATA binding
            protein family protein [Zea mays]
          Length = 545

 Score =  745 bits (1924), Expect = 0.0
 Identities = 369/546 (67%), Positives = 443/546 (81%), Gaps = 1/546 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQS+GI +L  DVA+ALAPDVEYR+REIMQE+IKCMRH+KRT+LTADD
Sbjct: 1    MSIVPKETIEVIAQSVGIPSLGADVAVALAPDVEYRLREIMQESIKCMRHAKRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL LRNVEP+YGF SGD L FKRAVGHKDLFY+DD++V+FK++I+ PLPKAPLDT+V
Sbjct: 61   VDSALGLRNVEPVYGFASGDPLRFKRAVGHKDLFYLDDREVDFKEIIDCPLPKAPLDTSV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEH-KDDGPPVDIKLPVKHVLSRELQLYF 1359
            VAHWLAIEGVQPAIPEN  ++A+V P++NK+SEH KDDG P D+KLPVKHVLSRELQ+YF
Sbjct: 121  VAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGLPADVKLPVKHVLSRELQMYF 180

Query: 1358 DKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRV 1179
            DKI ELT+SRSD+ LFKEALVSLA DSGLHPLVPYF+YFIADEVTRSL D P+L ALMRV
Sbjct: 181  DKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFIADEVTRSLGDLPVLLALMRV 240

Query: 1178 VRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGH 999
            V+SLL+N HIHIEPYLHQLMPS+ITC+VAKRLG+R SDNHWELR+F+ANLVA +C+RFGH
Sbjct: 241  VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVALVCQRFGH 300

Query: 998  VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXX 819
            VYHNLQ R+T+TL+HAFLDP K++TQHYGA++G++ALGPS IRLL+LPNL +Y       
Sbjct: 301  VYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLLPNLVTYMQLLEPE 360

Query: 818  XXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP 639
                 QKNEMKR EAWRVYGALLCAAG+C+YDRLKLFPGLL+P  R + ++N R++T  P
Sbjct: 361  LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSPSMRPLLQSNKRVLTNNP 420

Query: 638  NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXX 459
            NKRK+S +    QPPLKK+A D    ++ + +M  +MQ   D FP               
Sbjct: 421  NKRKSSTDLSATQPPLKKMATDATANSMASASMGGNMQGAMDGFPNQLGNPGMMQASSSG 480

Query: 458  XXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSA 279
              + ESI   + RR++    A R+SAVL QAWKED D GHLL SL+E+FGE I +F    
Sbjct: 481  QTV-ESIPSAAVRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPP 539

Query: 278  EMSFFL 261
            E+S F+
Sbjct: 540  EISLFV 545


>ref|XP_006839099.1| hypothetical protein AMTR_s00090p00135570 [Amborella trichopoda]
            gi|548841615|gb|ERN01668.1| hypothetical protein
            AMTR_s00090p00135570 [Amborella trichopoda]
          Length = 548

 Score =  744 bits (1921), Expect = 0.0
 Identities = 387/551 (70%), Positives = 436/551 (79%), Gaps = 6/551 (1%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSI+PKE IEVIAQS+GI+NL+PDVA+ LA DVEYR+REIMQEAIKCMRHSKRT+LTA+D
Sbjct: 1    MSIIPKENIEVIAQSVGINNLAPDVAVELAKDVEYRIREIMQEAIKCMRHSKRTVLTAED 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEPIYGF SGD L FKRA GHKDLFY+DDKDVEFKDVI+APLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPIYGFASGDPLRFKRAAGHKDLFYVDDKDVEFKDVIDAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            VAHWLAIEG+QPAIPENA V+ +V PS++KKSEHK+DG PVDIKLPVKHVLSRELQ+YFD
Sbjct: 121  VAHWLAIEGIQPAIPENATVDVIVAPSEHKKSEHKEDGLPVDIKLPVKHVLSRELQMYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KITEL +  SDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLN+F LL+ALMRVV
Sbjct: 181  KITELIVGGSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNEFQLLYALMRVV 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
            RSLLQN HIHIEPYLHQLMP VITCLVAKRLG++F+DNHW+LR+F A+LVA IC+RFGH 
Sbjct: 241  RSLLQNPHIHIEPYLHQLMPCVITCLVAKRLGHKFADNHWKLRDFTASLVALICRRFGHA 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            YHNLQPRVTRTLLHAFLDP KA TQHYGAI+GLAALGPSV+RLLILPNLE +        
Sbjct: 301  YHNLQPRVTRTLLHAFLDPNKARTQHYGAIQGLAALGPSVVRLLILPNLEPF-LQLLEKD 359

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGR-IVTTMP 639
                QKNEMKR+EAWRVYGALL A+GQC+YDRLK FP +L+P +   W+  GR ++TT P
Sbjct: 360  VLGDQKNEMKRNEAWRVYGALLRASGQCLYDRLKHFPNVLSPSSHAAWKLTGRPVITTPP 419

Query: 638  NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVT----ADRFPTTXXXXXXXXX 471
            NKRK   +   +QPPLKK A DG L    T +  T+   T        P +         
Sbjct: 420  NKRKVGPDQSAEQPPLKKAATDGLLSPNSTTSFQTEPPQTQVGDTVTMPMSSADASHVGP 479

Query: 470  XXXXXXINESISGGSSRREKVEGR-APRMSAVLTQAWKEDMDAGHLLASLFELFGERILA 294
                    +  S G  R   V GR A   S VL QAWK+DMDAG LLASLFELFGE + +
Sbjct: 480  SSSSTIRGQHDSVGPMR--GVAGRGALNASKVLGQAWKDDMDAGRLLASLFELFGESMFS 537

Query: 293  FTPSAEMSFFL 261
            F    E  FFL
Sbjct: 538  FIQPPERLFFL 548


>ref|XP_002298845.1| hypothetical protein POPTR_0001s37010g [Populus trichocarpa]
            gi|222846103|gb|EEE83650.1| hypothetical protein
            POPTR_0001s37010g [Populus trichocarpa]
          Length = 529

 Score =  742 bits (1916), Expect = 0.0
 Identities = 376/549 (68%), Positives = 435/549 (79%), Gaps = 5/549 (0%)
 Frame = -3

Query: 1892 SIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADDV 1713
            SIV KE IEVIAQ IGI+NLSPDV+L LAPDVEYR+REI+QEAIKCMRHS+RT LTA DV
Sbjct: 4    SIVAKEAIEVIAQGIGITNLSPDVSLTLAPDVEYRLREIIQEAIKCMRHSRRTALTAHDV 63

Query: 1712 DSALNLRNVEPIYGFTSGD---LLHFKRAV--GHKDLFYIDDKDVEFKDVIEAPLPKAPL 1548
            D+AL LRNVEPIYGF SG     L FKRA   GHKDL+YIDDKDV FK VIEAP PK PL
Sbjct: 64   DTALILRNVEPIYGFGSGGDKVPLRFKRAAAAGHKDLYYIDDKDVNFKHVIEAPPPKPPL 123

Query: 1547 DTAVVAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQ 1368
            DT++ +HWLAIEGVQPAIPEN P+E +   SD KKS++KDDG  +D+KLPVK +LSRELQ
Sbjct: 124  DTSLTSHWLAIEGVQPAIPENVPIEVI---SDGKKSDYKDDGLSIDVKLPVKDILSRELQ 180

Query: 1367 LYFDKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFAL 1188
            LYF+K+TELT  RS+S +FK+ALVSLATDSGLHPLVPYF  FIADEV+R+LN+F LL A+
Sbjct: 181  LYFEKVTELTARRSESAIFKQALVSLATDSGLHPLVPYFIQFIADEVSRNLNNFSLLLAV 240

Query: 1187 MRVVRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKR 1008
            MR+ RSLLQN +IHIEPYLHQLMPS+ITCLVAKRLGNRFSDNHWELRNF ANLVASICKR
Sbjct: 241  MRIARSLLQNPYIHIEPYLHQLMPSIITCLVAKRLGNRFSDNHWELRNFTANLVASICKR 300

Query: 1007 FGHVYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXX 828
            FGH YHNLQPR+ RTL+HAFLDPTK++ QHYG+I+GLAALGPSV+RLLILPNLE Y    
Sbjct: 301  FGHAYHNLQPRIIRTLVHAFLDPTKSLPQHYGSIQGLAALGPSVVRLLILPNLEPYLLLL 360

Query: 827  XXXXXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVT 648
                    QKNE+KRHEAW+VYGAL  AAG CMYDRLK+ PGL  PP+R +W++NGR++T
Sbjct: 361  EQEMLLEKQKNEIKRHEAWQVYGALTRAAGLCMYDRLKMLPGLFIPPSRAIWKSNGRVMT 420

Query: 647  TMPNKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXX 468
             MPNKRKAS +NLMQQP LKKIA D  +GA+P  +MP +MQ  A                
Sbjct: 421  AMPNKRKASTDNLMQQPLLKKIATDSAIGAMPMNSMPVEMQGAA---------------- 464

Query: 467  XXXXXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFT 288
                 I+  +S  +  R ++ GR  + S VL QAWKEDMDAGHLLASLFELF E + +FT
Sbjct: 465  ----TISRQLSNENVPRREISGRGLKTSTVLAQAWKEDMDAGHLLASLFELFSESMFSFT 520

Query: 287  PSAEMSFFL 261
            P  E+SFFL
Sbjct: 521  PKPELSFFL 529


>ref|XP_006447692.1| hypothetical protein CICLE_v10014827mg [Citrus clementina]
            gi|568830573|ref|XP_006469568.1| PREDICTED: transcription
            initiation factor TFIID subunit 6-like [Citrus sinensis]
            gi|557550303|gb|ESR60932.1| hypothetical protein
            CICLE_v10014827mg [Citrus clementina]
          Length = 542

 Score =  741 bits (1913), Expect = 0.0
 Identities = 373/545 (68%), Positives = 441/545 (80%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKET+EVIAQSIGISN S D ALALAPDVEYR+REIMQEAIKCMRHS+RT LT DD
Sbjct: 1    MSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD AL LRNVEP+YGF SG  L F+RA+G++DLFY+DDKDVEFKDVIEAPLP+APLDT++
Sbjct: 61   VDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSI 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            V HWLAIEGVQP IPENAPV+A+  PS+   +E KD G PV+IKLPVKH+LSRELQLYFD
Sbjct: 121  VCHWLAIEGVQPVIPENAPVQAIAAPSNGTNNEQKD-GLPVEIKLPVKHILSRELQLYFD 179

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KITEL +SRSDSVLFK+ALVSLATDSGLHPLVPYFTYF+ADEV+R LN++ LLFALMRVV
Sbjct: 180  KITELAVSRSDSVLFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNNYSLLFALMRVV 239

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             +LLQN HI IEPYLHQLMPSV+TCLVAKRLGNR +DNHWELR+F A LVA+ICKR+GHV
Sbjct: 240  WNLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVAAICKRYGHV 299

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y+ LQ R+T+TLL+A LDP +A+TQHYGA++GLAALGP+V+RLL+LPNL  Y        
Sbjct: 300  YNTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLLLPNLGPYLSLLEPEM 359

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNE+KRHEAWRVYGALL AAGQC+YDRLK+FP L + PAR+VW+ NG IV T+ N
Sbjct: 360  LLEKQKNEVKRHEAWRVYGALLQAAGQCIYDRLKIFPPLSSLPARSVWKTNG-IVATLSN 418

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRK SM+ L +QPPLKKIA DGP+ A+ T +MPT M+  A                    
Sbjct: 419  KRKTSMD-LEEQPPLKKIATDGPVDAVSTSSMPTPMEEDATAATPLDNSDADHPSPSSVQ 477

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
               +S S   S+R+K + +A ++SA+L Q WK+D+++G LL SLFELFGE IL+F P+ E
Sbjct: 478  IPPDSGSESRSKRDKGDSQAQKLSAILPQVWKDDLNSGKLLVSLFELFGEGILSFIPAPE 537

Query: 275  MSFFL 261
            MS FL
Sbjct: 538  MSLFL 542


>ref|XP_006375548.1| hypothetical protein POPTR_0014s15940g [Populus trichocarpa]
            gi|550324300|gb|ERP53345.1| hypothetical protein
            POPTR_0014s15940g [Populus trichocarpa]
          Length = 536

 Score =  740 bits (1910), Expect = 0.0
 Identities = 382/549 (69%), Positives = 440/549 (80%), Gaps = 4/549 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIV KETIEVIAQSIGISNLS DVAL LAPDVE+R+R+IMQEAIKCMRHSKRT LT DD
Sbjct: 1    MSIVAKETIEVIAQSIGISNLSEDVALTLAPDVEFRMRQIMQEAIKCMRHSKRTRLTTDD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD ALNL NVEPIYGF SG  L FKRA+GH+DLFY+DDKD++FKDVIEAPLPKAPLDTAV
Sbjct: 61   VDGALNLTNVEPIYGFASGGALQFKRAIGHRDLFYVDDKDIDFKDVIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
            V HWLAIEGVQPAIPENAP+E +  PSD K SE  D+ P VDIKLPVKHVLSRELQLYFD
Sbjct: 121  VCHWLAIEGVQPAIPENAPLEVIAPPSDGKISEQNDEFP-VDIKLPVKHVLSRELQLYFD 179

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            KIT+LT+ RSDSVLFKEALVSLATDSGLHPL+PYFTYFIADEV R LND+ LLFALMRVV
Sbjct: 180  KITDLTVRRSDSVLFKEALVSLATDSGLHPLIPYFTYFIADEVARGLNDYSLLFALMRVV 239

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             SLLQN HIHIEPYLHQLMPSV+TCLVA++LGNRF+DNHWELR+F ANLVASICKRFGHV
Sbjct: 240  WSLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNHWELRDFTANLVASICKRFGHV 299

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y++LQ R+T+TLL+A LDP +++TQHYGAI+GLAALGP+V+RLL+LPNL+ Y        
Sbjct: 300  YNSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLKPYLQLLEPEM 359

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP- 639
                QKNEMKRHEAW VYGALLCAAGQ +YDRLK+FP L++ PA  V R N ++VT  P 
Sbjct: 360  LLEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKMFPALMSHPACAVLRTNEKVVTKRPE 419

Query: 638  ---NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXX 468
               +KRKASME+ M+QPP KKIA DGP+          DMQV     P            
Sbjct: 420  NYQDKRKASMEH-MEQPPPKKIATDGPV----------DMQVEPIA-PVPLGDSKTGLST 467

Query: 467  XXXXXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFT 288
                  N S +G  ++++K + +A + SA+L+Q WK+D+++GHLL SLFELFGE IL+F 
Sbjct: 468  SSEHTPNYSEAGSRNQKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFI 527

Query: 287  PSAEMSFFL 261
            PS EMS FL
Sbjct: 528  PSPEMSLFL 536


>ref|XP_003577929.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Brachypodium distachyon]
          Length = 545

 Score =  739 bits (1908), Expect = 0.0
 Identities = 366/546 (67%), Positives = 446/546 (81%), Gaps = 1/546 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQS+GI+ L  DV+ ALAPDVEYR+REIMQEAIKCMRH+KRT+LTADD
Sbjct: 1    MSIVPKETIEVIAQSVGIATLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEP+YGF SGD L FKRAVGHKDLFYIDD++V+FK++IEAPLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEH-KDDGPPVDIKLPVKHVLSRELQLYF 1359
            VAHWLAIEGVQPAIPEN P++ ++ P+++K++EH KDDG PVDIKLPVKH+LSRELQ+YF
Sbjct: 121  VAHWLAIEGVQPAIPENPPIDVILAPTESKRTEHVKDDGLPVDIKLPVKHILSRELQMYF 180

Query: 1358 DKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRV 1179
            DKI ELT+SRS++ +F+EALVSL+ DSGLHPLVPYF+YFIADEVTRSL D P+LFALMRV
Sbjct: 181  DKIAELTMSRSNTSVFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLPVLFALMRV 240

Query: 1178 VRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGH 999
            V+SLL+N H+HIEPYLHQLMP +ITC+VAKRLG+R SDNHWELR+F+ANLVAS+C+R+GH
Sbjct: 241  VQSLLRNPHVHIEPYLHQLMPPMITCIVAKRLGHRLSDNHWELRDFSANLVASVCRRYGH 300

Query: 998  VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXX 819
            VYHNLQ R+T+TL+HAFLDP KA+TQHYGA++G++ALGPS IRLL+LPNLE+Y       
Sbjct: 301  VYHNLQIRLTKTLIHAFLDPHKALTQHYGAVQGISALGPSAIRLLLLPNLETYMQLLEPE 360

Query: 818  XXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP 639
                 QKNEMKR EAWRVYGALLCAAG+C+Y+RLKLFPGLL+P  R + R+N R+ T   
Sbjct: 361  LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYERLKLFPGLLSPSTRPLLRSNKRVATNNS 420

Query: 638  NKRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXX 459
            NKRK+S ++   QPPLKK+A D  + ++ +  +   M  T D F +              
Sbjct: 421  NKRKSSTDHSASQPPLKKMATDVSMNSMASAPIVGTMVGTMDGF-SAQLPNPGMMQALSS 479

Query: 458  XXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSA 279
              + ESI+    RR++    A R+SAVL QAWKED DAGHLL SL+E+FGE I +F    
Sbjct: 480  GQMVESITQVPIRRDQGNNHAQRVSAVLRQAWKEDQDAGHLLESLYEVFGEAIFSFIQPP 539

Query: 278  EMSFFL 261
            E+S F+
Sbjct: 540  EISIFV 545


>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
            [Glycine max]
          Length = 544

 Score =  737 bits (1903), Expect = 0.0
 Identities = 379/545 (69%), Positives = 429/545 (78%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQSIGI+NLS DVALA+APDVEYR+R+IMQEAIKCMRHSKRT LTADD
Sbjct: 1    MSIVPKETIEVIAQSIGINNLSHDVALAVAPDVEYRMRQIMQEAIKCMRHSKRTTLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VD+ALNL+NVEPIYGF SG  L FKRAVGH+DLFYIDDKDV+ KDVIEA LPKAPLDTAV
Sbjct: 61   VDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVIEASLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEHKDDGPPVDIKLPVKHVLSRELQLYFD 1356
              HWLAIEGVQPAIPENAPVE +  PSD KK E KDD  PVDIKLPVKHVLSRELQLYFD
Sbjct: 121  TCHWLAIEGVQPAIPENAPVEVISAPSDVKKHEQKDDNLPVDIKLPVKHVLSRELQLYFD 180

Query: 1355 KITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRVV 1176
            K+ ELTLS SDSVLFKEALVSLATDSGLHPLVPYFT FIADEV+R LN+FPLLFALMRVV
Sbjct: 181  KVAELTLSESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSRGLNNFPLLFALMRVV 240

Query: 1175 RSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGHV 996
             SLLQN HI IEPYLHQLMPSV+TCLVAKRLG R +DNHWELR+F A+LVASICKRFGHV
Sbjct: 241  SSLLQNPHIQIEPYLHQLMPSVVTCLVAKRLGTRLADNHWELRDFTAHLVASICKRFGHV 300

Query: 995  YHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXXX 816
            Y NLQ R+T+TLL+AFLDP KA+TQHYGAI+GL ALGP+V+RLL+LPNLE+Y        
Sbjct: 301  YSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPNVVRLLLLPNLETYMQLLEPEM 360

Query: 815  XXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMPN 636
                QKNE+KRHEAWRVYGALL AAGQC+YDRLK+FP   +PP   VW+ N +++T+   
Sbjct: 361  LLEKQKNELKRHEAWRVYGALLRAAGQCIYDRLKIFPTFPSPPLHAVWKTNSKVLTSSTY 420

Query: 635  KRKASMENLMQQPPLKKIAMDGPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXXXXXX 456
            KRKAS + L QQPPLKK A DG +G       P   Q  A     +              
Sbjct: 421  KRKASPDQLEQQPPLKKAATDGEVGVDLMNFSPVHKQEEAGT-QASSADSIIGTSSSSAQ 479

Query: 455  XINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFTPSAE 276
              NE+   G  R ++ + +A + SA LTQ WK+++++G  L SLFELFGE IL+F  + E
Sbjct: 480  MKNETTLDGELRGKRGDTQALKTSAALTQVWKDELNSGRTLVSLFELFGEGILSFIKAPE 539

Query: 275  MSFFL 261
            M  FL
Sbjct: 540  MYMFL 544


>dbj|BAJ93783.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 547

 Score =  737 bits (1903), Expect = 0.0
 Identities = 368/549 (67%), Positives = 440/549 (80%), Gaps = 4/549 (0%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQSIGI +L  DV+ ALAPDVEYR+REIMQEAIKCMRH+KRT+LTADD
Sbjct: 1    MSIVPKETIEVIAQSIGIPSLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEP+YGF SGD L FKRAVGHKDLFYIDD++V+FK++IEAPLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPVYGFASGDHLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEALVVPSDNKKSEH-KDDGPPVDIKLPVKHVLSRELQLYF 1359
            VAHWLAIEGVQPAIPEN P++A+  P++NK++E  KDDG PVDIKLPVKH+LSRELQ+YF
Sbjct: 121  VAHWLAIEGVQPAIPENPPIDAISAPTENKRTEQVKDDGLPVDIKLPVKHILSRELQMYF 180

Query: 1358 DKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFPLLFALMRV 1179
            DKI ELT+SRS + +F+EALVSL+ DSGLHPLVPYF+YFIADEVTRSL D P+LFALMRV
Sbjct: 181  DKIAELTMSRSSTPIFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLPVLFALMRV 240

Query: 1178 VRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVASICKRFGH 999
            V+SLL+N HIHIEPYLHQLMPS+ITC+VAKRLG+R SDNHWELR+F+ANLVAS+C+R+GH
Sbjct: 241  VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVASVCRRYGH 300

Query: 998  VYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLESYXXXXXXX 819
            VYHNLQ R+T+TL+HAFLDP KA+TQHYGA++G++ALGPS IRLL+LPNL++Y       
Sbjct: 301  VYHNLQIRLTKTLVHAFLDPHKALTQHYGAVQGISALGPSAIRLLLLPNLQTYMQLLDPE 360

Query: 818  XXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNNGRIVTTMP 639
                 Q NEMKR EAWRVYGALLCAAG+C+Y+RLKLFP LL P  R + R+N R+ T  P
Sbjct: 361  LQLEKQSNEMKRKEAWRVYGALLCAAGKCLYERLKLFPNLLCPSTRPLLRSNSRVATNNP 420

Query: 638  NKRKASMENLMQQPPLKKIAMD---GPLGALPTITMPTDMQVTADRFPTTXXXXXXXXXX 468
            NKRK+S +    QPPLKK+A D    P+G+   +    +M  + D F             
Sbjct: 421  NKRKSSTDLSASQPPLKKMASDVSMSPMGSAAPVA--GNMAGSMDGFSAQLPNPGMMQAS 478

Query: 467  XXXXXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFELFGERILAFT 288
                 +    + G+ RR++    A R+SAVL QAWKED DAGHLL SL E+FGE I +F 
Sbjct: 479  SSGQKVESMTAAGAIRRDQGSNHAQRVSAVLRQAWKEDQDAGHLLGSLHEVFGEAIFSFI 538

Query: 287  PSAEMSFFL 261
               E+S FL
Sbjct: 539  QPPELSIFL 547


>gb|EMT21817.1| Transcription initiation factor TFIID subunit 6 [Aegilops tauschii]
          Length = 555

 Score =  735 bits (1897), Expect = 0.0
 Identities = 375/559 (67%), Positives = 442/559 (79%), Gaps = 14/559 (2%)
 Frame = -3

Query: 1895 MSIVPKETIEVIAQSIGISNLSPDVALALAPDVEYRVREIMQEAIKCMRHSKRTILTADD 1716
            MSIVPKETIEVIAQSIGI +L  DV+ ALAPDVEYR+REIMQEAIKCMRH+KRT+LTADD
Sbjct: 1    MSIVPKETIEVIAQSIGIPSLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD 60

Query: 1715 VDSALNLRNVEPIYGFTSGDLLHFKRAVGHKDLFYIDDKDVEFKDVIEAPLPKAPLDTAV 1536
            VDSAL+LRNVEP+YGF SGD L FKRAVGHKDLFYIDD++V+FK++IEAPLPKAPLDTAV
Sbjct: 61   VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV 120

Query: 1535 VAHWLAIEGVQPAIPENAPVEA--------LVVPSDNKKSEH-KDDGPPVDIKLPVKHVL 1383
            VAHWLAIEGVQPAIPEN P++A        +  P++NK++EH KDDG PVDIKLPVKH+L
Sbjct: 121  VAHWLAIEGVQPAIPENPPIDASPQYFTPAIAAPTENKRTEHAKDDGLPVDIKLPVKHIL 180

Query: 1382 SRELQLYFDKITELTLSRSDSVLFKEALVSLATDSGLHPLVPYFTYFIADEVTRSLNDFP 1203
            SRELQ+YFDKI ELT+SRS + +F+EALVSL+ DSGLHPLVPYF+YFIADEVTRSL D P
Sbjct: 181  SRELQMYFDKIAELTMSRSSTPVFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLP 240

Query: 1202 LLFALMRVVRSLLQNQHIHIEPYLHQLMPSVITCLVAKRLGNRFSDNHWELRNFAANLVA 1023
            +LFALMRVV+SLL+N HIHIEPYLHQLMPS+ITC+VAKRLG+R SDNHWELR+F+ANLVA
Sbjct: 241  VLFALMRVVQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVA 300

Query: 1022 SICKRFGHVYHNLQPRVTRTLLHAFLDPTKAMTQHYGAIKGLAALGPSVIRLLILPNLES 843
            S+C+R+GHVYHNLQ R+T+TL+HAFLDP KA+TQHYGA++G++ALGPS IRLL+LPNL++
Sbjct: 301  SVCRRYGHVYHNLQIRLTKTLVHAFLDPHKALTQHYGAVQGISALGPSAIRLLLLPNLQT 360

Query: 842  YXXXXXXXXXXXXQKNEMKRHEAWRVYGALLCAAGQCMYDRLKLFPGLLAPPARTVWRNN 663
            Y            Q NEMKR EAWRVYGALLCAAG+C+Y+RLKLFP LL+PPAR V R+N
Sbjct: 361  YMQLLDPELQLEKQSNEMKRKEAWRVYGALLCAAGKCLYERLKLFPNLLSPPARPVLRSN 420

Query: 662  GRIVTTMPNKRKASMENLMQQPPLKKIAMD---GPLG-ALPTI-TMPTDMQVTADRFPTT 498
             R+ T  PNKRK+S      QPPLKK+A D    P+G A P    MP  M    D F   
Sbjct: 421  SRVATNNPNKRKSSTALSASQPPLKKMASDVSMSPMGSAAPGAGNMPGSM----DGFSAQ 476

Query: 497  XXXXXXXXXXXXXXXINESISGGSSRREKVEGRAPRMSAVLTQAWKEDMDAGHLLASLFE 318
                           +    + G+ RR++    A R+S VL QAWKED DAGHLL SL E
Sbjct: 477  LPNPSMMQASSSGQKVESMTAAGAIRRDQGNNHAQRVSTVLRQAWKEDQDAGHLLGSLHE 536

Query: 317  LFGERILAFTPSAEMSFFL 261
            +FGE I +F    E+S FL
Sbjct: 537  VFGEAIFSFIQPPELSIFL 555