BLASTX nr result
ID: Akebia24_contig00004022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00004022
(440 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836434.1| hypothetical protein AMTR_s00092p00163840 [A... 63 4e-08
ref|XP_002972211.1| ubiquitin-protein ligase, Cullin 4 [Selagine... 62 1e-07
ref|XP_002984123.1| ubiquitin-protein ligase, cullin 4 [Selagine... 62 1e-07
ref|XP_004162809.1| PREDICTED: LOW QUALITY PROTEIN: cullin-4-lik... 60 3e-07
ref|XP_004149667.1| PREDICTED: cullin-4-like [Cucumis sativus] 60 3e-07
ref|XP_002270764.2| PREDICTED: cullin-4 [Vitis vinifera] 59 7e-07
emb|CBI30911.3| unnamed protein product [Vitis vinifera] 59 7e-07
emb|CAN75926.1| hypothetical protein VITISV_010491 [Vitis vinifera] 59 7e-07
ref|XP_001776334.1| predicted protein [Physcomitrella patens] gi... 59 9e-07
gb|AAL27655.2| putative cullin protein [Olea europaea] 59 9e-07
ref|XP_006361548.1| PREDICTED: cullin-4-like [Solanum tuberosum] 58 2e-06
ref|XP_001764780.1| predicted protein [Physcomitrella patens] gi... 55 8e-06
>ref|XP_006836434.1| hypothetical protein AMTR_s00092p00163840 [Amborella trichopoda]
gi|548838952|gb|ERM99287.1| hypothetical protein
AMTR_s00092p00163840 [Amborella trichopoda]
Length = 822
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = -1
Query: 230 SLEKNNMQHHFEEEDSSMNVVEDDL--KANASTMVLGVGCGQNLTPGIAANLSRKKAIPP 57
S +K N + F +ED+ + +D++ A + L GC G+AANLSRKKA PP
Sbjct: 46 SSDKQNPR--FLDEDAMLVDRKDEVIPVPAAQAVALSAGCSGT---GMAANLSRKKATPP 100
Query: 56 QPPKKLVIKPLKDKPKLP 3
QP KKLVI+P KDKPKLP
Sbjct: 101 QPTKKLVIRPFKDKPKLP 118
>ref|XP_002972211.1| ubiquitin-protein ligase, Cullin 4 [Selaginella moellendorffii]
gi|300159678|gb|EFJ26297.1| ubiquitin-protein ligase,
Cullin 4 [Selaginella moellendorffii]
Length = 766
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = -1
Query: 158 LKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPPKKLVIKPLKDKPKLP 3
L + +G+ G N T G ANLSRKKA PPQP KKLVIKP KDKPKLP
Sbjct: 12 LSVASPVTAVGLAGGSNST-GTTANLSRKKATPPQPTKKLVIKPFKDKPKLP 62
>ref|XP_002984123.1| ubiquitin-protein ligase, cullin 4 [Selaginella moellendorffii]
gi|300147972|gb|EFJ14633.1| ubiquitin-protein ligase,
cullin 4 [Selaginella moellendorffii]
Length = 766
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/52 (61%), Positives = 35/52 (67%)
Frame = -1
Query: 158 LKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPPKKLVIKPLKDKPKLP 3
L + +G+ G N T G ANLSRKKA PPQP KKLVIKP KDKPKLP
Sbjct: 12 LSVASPVTAVGLAGGSNST-GTTANLSRKKATPPQPTKKLVIKPFKDKPKLP 62
>ref|XP_004162809.1| PREDICTED: LOW QUALITY PROTEIN: cullin-4-like [Cucumis sativus]
Length = 833
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = -1
Query: 221 KNNMQHHFEEE--DSSMNVVEDDLKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPP 48
KN + HH + + SSM + ++DLK + ++G + +A NLSRKKA PPQP
Sbjct: 61 KNGLHHHDDPDFDPSSMPLDDEDLKPPHHSPLIGA------SRSVATNLSRKKATPPQPA 114
Query: 47 KKLVIKPLKDKPKLP 3
KKLVIK LK KP LP
Sbjct: 115 KKLVIKLLKAKPTLP 129
>ref|XP_004149667.1| PREDICTED: cullin-4-like [Cucumis sativus]
Length = 833
Score = 60.1 bits (144), Expect = 3e-07
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = -1
Query: 221 KNNMQHHFEEE--DSSMNVVEDDLKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPP 48
KN + HH + + SSM + ++DLK + ++G + +A NLSRKKA PPQP
Sbjct: 61 KNGLHHHDDPDFDPSSMPLDDEDLKPPHHSPLIGA------SRSVATNLSRKKATPPQPA 114
Query: 47 KKLVIKPLKDKPKLP 3
KKLVIK LK KP LP
Sbjct: 115 KKLVIKLLKAKPTLP 129
>ref|XP_002270764.2| PREDICTED: cullin-4 [Vitis vinifera]
Length = 828
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = -1
Query: 206 HHFEEED--SSMNVVEDDLKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPPKK-LV 36
HHF ++D S ++DDLK + + C + G+ ANLSRKKA PPQP KK LV
Sbjct: 57 HHFPDDDFDPSAMALDDDLKPDDAD---AAACSRPSAGGVTANLSRKKATPPQPAKKQLV 113
Query: 35 IKPLKDKPKLP 3
IK LK KP LP
Sbjct: 114 IKLLKAKPTLP 124
>emb|CBI30911.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = -1
Query: 206 HHFEEED--SSMNVVEDDLKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPPKK-LV 36
HHF ++D S ++DDLK + + C + G+ ANLSRKKA PPQP KK LV
Sbjct: 31 HHFPDDDFDPSAMALDDDLKPDDAD---AAACSRPSAGGVTANLSRKKATPPQPAKKQLV 87
Query: 35 IKPLKDKPKLP 3
IK LK KP LP
Sbjct: 88 IKLLKAKPTLP 98
>emb|CAN75926.1| hypothetical protein VITISV_010491 [Vitis vinifera]
Length = 806
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = -1
Query: 206 HHFEEED--SSMNVVEDDLKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQPPKK-LV 36
HHF ++D S ++DDLK + + C + G+ ANLSRKKA PPQP KK LV
Sbjct: 31 HHFPDDDFDPSAMALDDDLKPDDAD---AAACSRPSAGGVTANLSRKKATPPQPAKKQLV 87
Query: 35 IKPLKDKPKLP 3
IK LK KP LP
Sbjct: 88 IKLLKAKPTLP 98
>ref|XP_001776334.1| predicted protein [Physcomitrella patens]
gi|162672294|gb|EDQ58833.1| predicted protein
[Physcomitrella patens]
Length = 768
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/59 (57%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = -1
Query: 170 VEDDLKANAST---MVLGVGCGQNLTPGIAANLSRKKAIPPQPPKKLVIKPLKDKPKLP 3
VED L + S V V N G ANLSRKKA PP P KKLVIKP KDKPKLP
Sbjct: 6 VEDHLASTVSYPAGSVSAVTLSNNPGVGTTANLSRKKATPPPPAKKLVIKPFKDKPKLP 64
>gb|AAL27655.2| putative cullin protein [Olea europaea]
Length = 816
Score = 58.5 bits (140), Expect = 9e-07
Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Frame = -1
Query: 242 ATNYSLEKNNMQH-----HFEEEDSSMNVVEDD----LKANASTMVLG--VGCGQNLTPG 96
A YSL+ N Q HF+ +S + ED L A+AS+ G VG G G
Sbjct: 24 ALAYSLDNKNGQQSVPHVHFDPSANSSMIDEDSNDVVLDASASSNSFGRVVGGGG----G 79
Query: 95 IAANLSRKKAIPPQPPKKLVIKPLKDKPKLP 3
+ ANL+RKKA PPQP KKLVIK +K KP LP
Sbjct: 80 VTANLARKKATPPQPAKKLVIKLVKAKPMLP 110
>ref|XP_006361548.1| PREDICTED: cullin-4-like [Solanum tuberosum]
Length = 824
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = -1
Query: 230 SLEKNNMQH-HFEEEDSSMNVVEDDLKANASTMVLGVGCGQNLTPGIAANLSRKKAIPPQ 54
S++ N QH HF + DD N+S M ++ G+ ANLSRKKA PPQ
Sbjct: 51 SIDNKNGQHVHFSSDI-------DDPSGNSSMMEDSNIDASSVAGGVTANLSRKKATPPQ 103
Query: 53 PPKKLVIKPLKDKPKLP 3
P KKLVIK LK KP LP
Sbjct: 104 PAKKLVIKLLKAKPTLP 120
>ref|XP_001764780.1| predicted protein [Physcomitrella patens]
gi|162684074|gb|EDQ70479.1| predicted protein
[Physcomitrella patens]
Length = 745
Score = 55.5 bits (132), Expect = 8e-06
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = -1
Query: 98 GIAANLSRKKAIPPQPPKKLVIKPLKDKPKLP 3
G ANLSRKKA PPQP +KLVIKP K+KPKLP
Sbjct: 10 GTTANLSRKKATPPQPARKLVIKPFKEKPKLP 41