BLASTX nr result
ID: Akebia24_contig00003995
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00003995
(1280 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V... 593 e-167
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li... 586 e-165
ref|XP_002520343.1| replication factor C / DNA polymerase III ga... 585 e-164
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr... 585 e-164
ref|XP_002302226.1| replication factor C 36 kDA family protein [... 578 e-162
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ... 578 e-162
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li... 577 e-162
ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-li... 575 e-161
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li... 571 e-160
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc... 570 e-160
ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-li... 568 e-159
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li... 568 e-159
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li... 567 e-159
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A... 565 e-158
ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutr... 564 e-158
gb|ACG35868.1| replication factor C subunit 3 [Zea mays] 564 e-158
ref|XP_004954087.1| PREDICTED: replication factor C subunit 5-li... 563 e-158
ref|XP_007137424.1| hypothetical protein PHAVU_009G126000g [Phas... 563 e-158
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g... 563 e-158
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi... 561 e-157
>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
gi|302141794|emb|CBI18997.3| unnamed protein product
[Vitis vinifera]
Length = 360
Score = 593 bits (1530), Expect = e-167
Identities = 303/360 (84%), Positives = 333/360 (92%), Gaps = 6/360 (1%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDPI-KPNKGKNIIVPG----KATPWVEKYRPQSLADVAAHRDIIDT 1055
MAE ++ M+ID D+ + K NKGK+++V G KATPWVEKYRPQSLADVAAHRDI+DT
Sbjct: 1 MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDT 60
Query: 1054 IDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQ 875
IDRLT+E +LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASDDRGID+VRQQ
Sbjct: 61 IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQ 120
Query: 874 IQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 698
IQDFASTQSFSFG KSSVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKI
Sbjct: 121 IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180
Query: 697 IPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQ 518
IPALQSRCTRFRFAPLDA HVTERLK+VI+AE L+V E+GL ALVRLS+GDMRKALNILQ
Sbjct: 181 IPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQ 240
Query: 517 STHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIV 338
STHMAS+ ITEEAVYLCTGNP+PKDIEQISYWLLNE+F SF I E+KMRKGLALVD+V
Sbjct: 241 STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVV 300
Query: 337 REVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAAK 158
REV MF+FKIKMPSD+RV LINDLADIEYR+SFGCNDKLQLGSLI+SFTRAR+A+VAAAK
Sbjct: 301 REVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAAAK 360
>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
Length = 364
Score = 586 bits (1511), Expect = e-165
Identities = 302/361 (83%), Positives = 331/361 (91%), Gaps = 8/361 (2%)
Frame = -2
Query: 1216 AEIISPMEIDGSDDP-IKP-NKGKNIIVPG-----KATPWVEKYRPQSLADVAAHRDIID 1058
AE +S M+ID ++ +KP + GKN+IV G KA+PWVEKYRPQSLADVAAHRDI+D
Sbjct: 4 AETVSLMDIDEDENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63
Query: 1057 TIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQ 878
TIDRLT+E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+VRQ
Sbjct: 64 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123
Query: 877 QIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 701
QIQDFASTQSFSFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN VNK
Sbjct: 124 QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183
Query: 700 IIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNIL 521
IIPALQSRCTRFRFAPL+ HVTERLK+VI+AEGL+V E GL ALVRL NGDMRKALNIL
Sbjct: 184 IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243
Query: 520 QSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDI 341
QSTHMAS+ ITEEAVYLCTGNP+PKDIEQISYWLLNE+F SFK I EMKMRKGLALVDI
Sbjct: 244 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDI 303
Query: 340 VREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
VREV MF+FKIKMPSD+RV L+NDLADIEYR+SFGCNDKLQLGS+IS+FT+ARSA+VAAA
Sbjct: 304 VREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363
Query: 160 K 158
K
Sbjct: 364 K 364
>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
[Ricinus communis] gi|223540562|gb|EEF42129.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 360
Score = 585 bits (1508), Expect = e-164
Identities = 296/360 (82%), Positives = 328/360 (91%), Gaps = 6/360 (1%)
Frame = -2
Query: 1219 MAEIISPMEIDGS-----DDPIKPNKGKNIIVPGKATPWVEKYRPQSLADVAAHRDIIDT 1055
MA++++ M+ID + KPNKGKN+ V KATPWVEKYRPQSLADVAAHRDI+DT
Sbjct: 1 MADVVTIMDIDEDVKEKQNQLSKPNKGKNVFVDTKATPWVEKYRPQSLADVAAHRDIVDT 60
Query: 1054 IDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQ 875
IDRLTNE +LPHLLLYGPPGTGKTSTILAVARKLYG QYHNMILELNASDDRGID+VRQQ
Sbjct: 61 IDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVVRQQ 120
Query: 874 IQDFASTQSFSF-GKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 698
IQDFASTQSFSF KS+VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKI
Sbjct: 121 IQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180
Query: 697 IPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQ 518
IPALQSRCTRFRFAPLD HVT+RLK+VI+AEGL+V E GL A+VRLSNGDMRKALNILQ
Sbjct: 181 IPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALNILQ 240
Query: 517 STHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIV 338
STHMAS+ ITEEAV+LCTGNP+PKDI+QISYWLLNE+F SFK I E+K +KGLALVDIV
Sbjct: 241 STHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALVDIV 300
Query: 337 REVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAAK 158
REV MF+FKIKMPSD+RV LIND+ADIEYR+SFGC+DKLQLGSL++SFT ARSA+VAAAK
Sbjct: 301 REVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVAAAK 360
>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
gi|557536359|gb|ESR47477.1| hypothetical protein
CICLE_v10001597mg [Citrus clementina]
Length = 364
Score = 585 bits (1507), Expect = e-164
Identities = 301/361 (83%), Positives = 330/361 (91%), Gaps = 8/361 (2%)
Frame = -2
Query: 1216 AEIISPMEIDGSDDP-IKP-NKGKNIIVPG-----KATPWVEKYRPQSLADVAAHRDIID 1058
AE +S M+ D ++ +KP + GKN+IV G KA+PWVEKYRPQSLADVAAHRDI+D
Sbjct: 4 AETVSLMDFDEDENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63
Query: 1057 TIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQ 878
TIDRLT+E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+VRQ
Sbjct: 64 TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123
Query: 877 QIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 701
QIQDFASTQSFSFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICN VNK
Sbjct: 124 QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183
Query: 700 IIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNIL 521
IIPALQSRCTRFRFAPL+ HVTERLK+VI+AEGL+V E GL ALVRL NGDMRKALNIL
Sbjct: 184 IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243
Query: 520 QSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDI 341
QSTHMAS+ ITEEAVYLCTGNP+PKDIEQISYWLLNE+F SFK I EMKMRKGLALVDI
Sbjct: 244 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDI 303
Query: 340 VREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
VREV MF+FKIKMPSD+RV L+NDLADIEYR+SFGCNDKLQLGS+IS+FT+ARSA+VAAA
Sbjct: 304 VREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363
Query: 160 K 158
K
Sbjct: 364 K 364
>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
family protein [Populus trichocarpa]
Length = 363
Score = 578 bits (1490), Expect = e-162
Identities = 298/362 (82%), Positives = 328/362 (90%), Gaps = 9/362 (2%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDP---IKPNKGKNIIVP-----GKATPWVEKYRPQSLADVAAHRDI 1064
MAE I+ M+ID ++ KPNKGK ++VP GKATPWVEKYRPQSLADVAAHRDI
Sbjct: 1 MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60
Query: 1063 IDTIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIV 884
IDTIDRLT+E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+V
Sbjct: 61 IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120
Query: 883 RQQIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 707
R+QIQDFASTQSFSFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHV
Sbjct: 121 RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 706 NKIIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALN 527
NKIIPALQSRCTRFRFAPLD HV ERLK+VI+AEGL+V E+GL AL LSNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240
Query: 526 ILQSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALV 347
ILQSTHMAS+ ITEE VYLCTGNP+P+D++QI++WLLNE+F S+K I E+K RKGLALV
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300
Query: 346 DIVREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVA 167
DIVREV MF+FKIKM SDIRV LINDLADIEYR+SFGCNDKLQLGSLI+SFTRARSA+VA
Sbjct: 301 DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360
Query: 166 AA 161
AA
Sbjct: 361 AA 362
>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
gi|587990838|gb|EXC75062.1| Replication factor C subunit
5 [Morus notabilis]
Length = 365
Score = 578 bits (1489), Expect = e-162
Identities = 302/365 (82%), Positives = 328/365 (89%), Gaps = 11/365 (3%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDP----IKP-NKGKNIIVP--GKATPWVEKYRPQSLADVAAHRDII 1061
M E++S M+ID D+ KP NKGK+ P GKATPWVEKYRPQSLADVAAHRDII
Sbjct: 1 MTEVVSLMDIDDDDNAGDRSAKPINKGKSGAAPSDGKATPWVEKYRPQSLADVAAHRDII 60
Query: 1060 DTIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVR 881
DTIDRLT+E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+VR
Sbjct: 61 DTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVR 120
Query: 880 QQIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVN 704
QQIQDFASTQSFSFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRF+LICN+VN
Sbjct: 121 QQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVN 180
Query: 703 KIIPALQSRCTRFRFAPLDATHVTERLKYVIDAEG---LNVDENGLTALVRLSNGDMRKA 533
KIIPALQSRCTRFRFAPLD HV ERLK+VI+AEG L+V E+GLTA VRLSNGDMRKA
Sbjct: 181 KIIPALQSRCTRFRFAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKA 240
Query: 532 LNILQSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLA 353
LNILQSTHMAS+ ITEE VYLCTGNP+PKDIEQISYWLLNE+F SFK I MK RKGLA
Sbjct: 241 LNILQSTHMASKKITEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLA 300
Query: 352 LVDIVREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAM 173
LVDIVREV MF+FKIKMPSD RV LINDLADIEYR+SFGCNDKLQLGSLI+SFT+AR+++
Sbjct: 301 LVDIVREVTMFVFKIKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFTKARASL 360
Query: 172 VAAAK 158
VAAAK
Sbjct: 361 VAAAK 365
>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 361
Score = 577 bits (1487), Expect = e-162
Identities = 295/360 (81%), Positives = 320/360 (88%), Gaps = 7/360 (1%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDPIKPNKGKNII------VPGKATPWVEKYRPQSLADVAAHRDIID 1058
MA+ PM+ID P+KGK+++ GKA PWVEKYRPQSL DVAAHRDI+D
Sbjct: 1 MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60
Query: 1057 TIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQ 878
TIDRLT E +LPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASDDRGID+VRQ
Sbjct: 61 TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120
Query: 877 QIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 701
QIQDFASTQS SFG KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK
Sbjct: 121 QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180
Query: 700 IIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNIL 521
IIPALQSRCTRFRFAPLDA HVTERLK+VI AEGL+V+++GL A VRLSNGDMRKALNIL
Sbjct: 181 IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240
Query: 520 QSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDI 341
QSTHMAS+ ITEEAVYLCTGNP+PKDIE ISYWLLNE F SFK I EMK RKGLAL+DI
Sbjct: 241 QSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300
Query: 340 VREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
VREV MF+FKIKMPS +RV L+NDLADIEYR+SFGCNDKLQLGS+I+SFTRARSA+VAAA
Sbjct: 301 VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360
>ref|XP_004149801.1| PREDICTED: replication factor C subunit 5-like [Cucumis sativus]
gi|449499057|ref|XP_004160708.1| PREDICTED: replication
factor C subunit 5-like [Cucumis sativus]
Length = 363
Score = 575 bits (1481), Expect = e-161
Identities = 296/363 (81%), Positives = 326/363 (89%), Gaps = 9/363 (2%)
Frame = -2
Query: 1219 MAEIISPMEID---GSDDPIKPNKGKNIIVP-----GKATPWVEKYRPQSLADVAAHRDI 1064
M+E+IS M+ID G+++ K KGKN+ P GKA PWVEK+RP+SLADVAAHRDI
Sbjct: 1 MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60
Query: 1063 IDTIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIV 884
+DTID+LT+E +LPHLLLYGPPGTGKTSTILAVARKLYG YHNMILELNASDDRGID+V
Sbjct: 61 VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120
Query: 883 RQQIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 707
RQQIQDFASTQSFSFG K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
Query: 706 NKIIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALN 527
NKIIPALQSRCTRFRFAPLD HVTERL+YVI+AE L+V E GL ALVRL GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN 240
Query: 526 ILQSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALV 347
ILQSTHMAS+HITEEAVYLCTGNPMPKDIEQIS+WLLNE F+ SFK I E+K RKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300
Query: 346 DIVREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVA 167
DIVREV +F+FKI+MPS+IRV LINDLADIEYRM+FGCNDKLQLGSLISSFT ARSA+V
Sbjct: 301 DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVG 360
Query: 166 AAK 158
AA+
Sbjct: 361 AAQ 363
>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
Length = 363
Score = 571 bits (1471), Expect = e-160
Identities = 295/362 (81%), Positives = 321/362 (88%), Gaps = 9/362 (2%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDPI--KPNKGKNIIVP------GKATPWVEKYRPQSLADVAAHRDI 1064
MAE M+ID D +P+K K+++V GKA PWVEKYRP SL DVAAHRDI
Sbjct: 1 MAETNHHMDIDSDDHTYTARPDKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDI 60
Query: 1063 IDTIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIV 884
+DTIDRLT E +LPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASDDRGID+V
Sbjct: 61 VDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVV 120
Query: 883 RQQIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 707
RQQIQDFASTQS SFG KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV
Sbjct: 121 RQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 180
Query: 706 NKIIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALN 527
NKIIPALQSRCTRFRFAPLDA HVTERLK+VI AEGL+V+++GL ALVRLSNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALN 240
Query: 526 ILQSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALV 347
ILQSTHMAS+ ITEE VYLCTGNP+PKDIEQISYWLLNE F SFK I EMK RKGLALV
Sbjct: 241 ILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALV 300
Query: 346 DIVREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVA 167
DIVREV +F+FKIKMPS +RV L+NDLADIEYR+SFGCNDKLQLGS+I+SF+RARSA+VA
Sbjct: 301 DIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVA 360
Query: 166 AA 161
AA
Sbjct: 361 AA 362
>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
gi|355491087|gb|AES72290.1| Replication factor C subunit
[Medicago truncatula]
Length = 355
Score = 570 bits (1468), Expect = e-160
Identities = 294/360 (81%), Positives = 321/360 (89%), Gaps = 7/360 (1%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDPIKPNKGKNIIVPG------KATPWVEKYRPQSLADVAAHRDIID 1058
MAE M+ID +D KGK +I G KA+ WVEKYRPQSL DVAAHRDI+D
Sbjct: 1 MAEETYAMDIDVTD------KGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVD 54
Query: 1057 TIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQ 878
TIDRLT E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+VRQ
Sbjct: 55 TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 114
Query: 877 QIQDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 701
QIQDFASTQS SFG K SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK
Sbjct: 115 QIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 174
Query: 700 IIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNIL 521
IIPALQSRCTRFRFAPLDA HVTERLK+VI+AE L+V ++GL+ALVRLSNGDMRKALNIL
Sbjct: 175 IIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNIL 234
Query: 520 QSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDI 341
QSTHMAS+ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ SFK I++MK RKGLAL+DI
Sbjct: 235 QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDI 294
Query: 340 VREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
VREV MF+FKI MPS +RV L+NDLADIEYR+SFGCNDKLQLGS+++SFTRARSAMVAAA
Sbjct: 295 VREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMVAAA 354
>ref|XP_004290888.1| PREDICTED: replication factor C subunit 5-like [Fragaria vesca subsp.
vesca]
Length = 363
Score = 568 bits (1465), Expect = e-159
Identities = 291/363 (80%), Positives = 324/363 (89%), Gaps = 9/363 (2%)
Frame = -2
Query: 1219 MAEIISPMEIDGSD---DPIKPN--KGKNIIVPG----KATPWVEKYRPQSLADVAAHRD 1067
MAE+I+PM+IDG D +KPN KGKN+ V G +ATPWVEKYRPQSLADVAAHRD
Sbjct: 1 MAELITPMDIDGDDTNPSSLKPNNDKGKNVAVSGPIHGEATPWVEKYRPQSLADVAAHRD 60
Query: 1066 IIDTIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDI 887
I+DTIDRL +E +LPHLLLYGPPGTGKTSTILAVARKLYGAQY +ILELNASDDRGID+
Sbjct: 61 IVDTIDRLASENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRKIILELNASDDRGIDV 120
Query: 886 VRQQIQDFASTQSFSFGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 707
VRQQIQ+FAS+Q K VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRF LICNHV
Sbjct: 121 VRQQIQNFASSQGLETEKVPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNHV 180
Query: 706 NKIIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALN 527
NKIIPALQSRCTRFRFAPLD+ HV +RLK+VIDAEGL+V ENGL A+VRLSNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDSFHVKDRLKHVIDAEGLDVFENGLAAVVRLSNGDMRKALN 240
Query: 526 ILQSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALV 347
ILQSTHMAS+ ITEEAVYLCTGNP+PKDIEQIS+WLLNE+FT +FK I +MK KGLALV
Sbjct: 241 ILQSTHMASQKITEEAVYLCTGNPLPKDIEQISHWLLNESFTEAFKRISDMKTIKGLALV 300
Query: 346 DIVREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVA 167
DIVREV MF+FKIKMP D+RV LINDLADIEYR+SFGCNDKLQLGS+I++FT+ARSA+VA
Sbjct: 301 DIVREVTMFVFKIKMPPDVRVLLINDLADIEYRLSFGCNDKLQLGSIIATFTKARSALVA 360
Query: 166 AAK 158
AAK
Sbjct: 361 AAK 363
>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
arietinum]
Length = 363
Score = 568 bits (1463), Expect = e-159
Identities = 289/355 (81%), Positives = 321/355 (90%), Gaps = 8/355 (2%)
Frame = -2
Query: 1201 PMEIDGSDD-PIKPNKGKNII------VPGKATPWVEKYRPQSLADVAAHRDIIDTIDRL 1043
PM+ID ++ P+KGK +I + GK+T WVEKYRPQSL DVAAHRDI+DTIDRL
Sbjct: 8 PMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRL 67
Query: 1042 TNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQDF 863
T E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+VRQQIQDF
Sbjct: 68 TTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDF 127
Query: 862 ASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPAL 686
ASTQS SFG K SVKL+LLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII AL
Sbjct: 128 ASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQAL 187
Query: 685 QSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQSTHM 506
QSRCTRFRFAPLDA HVTERLK+VI AEGL+V ++GL+ALVRLSNGDMRKALNILQSTHM
Sbjct: 188 QSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTHM 247
Query: 505 ASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVREVM 326
AS+ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ S+K I ++K RKGLAL+DIVREV
Sbjct: 248 ASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREVT 307
Query: 325 MFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
MF+FKIKMP+ +RV L+NDLADIEYR+SFGCNDKLQLGS+I+SFTRARSA+VAAA
Sbjct: 308 MFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362
>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
arietinum]
Length = 364
Score = 567 bits (1462), Expect = e-159
Identities = 289/356 (81%), Positives = 321/356 (90%), Gaps = 9/356 (2%)
Frame = -2
Query: 1201 PMEIDGSDD-PIKPNKGKNII------VPGKATPWVEKYRPQSLADVAAHRDIIDTIDRL 1043
PM+ID ++ P+KGK +I + GK+T WVEKYRPQSL DVAAHRDI+DTIDRL
Sbjct: 8 PMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDTIDRL 67
Query: 1042 TNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQDF 863
T E +LPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGID+VRQQIQDF
Sbjct: 68 TTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDF 127
Query: 862 ASTQSFSFG--KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPA 689
ASTQS SFG K SVKL+LLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII A
Sbjct: 128 ASTQSLSFGFVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIQA 187
Query: 688 LQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQSTH 509
LQSRCTRFRFAPLDA HVTERLK+VI AEGL+V ++GL+ALVRLSNGDMRKALNILQSTH
Sbjct: 188 LQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQSTH 247
Query: 508 MASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVREV 329
MAS+ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ S+K I ++K RKGLAL+DIVREV
Sbjct: 248 MASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIVREV 307
Query: 328 MMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
MF+FKIKMP+ +RV L+NDLADIEYR+SFGCNDKLQLGS+I+SFTRARSA+VAAA
Sbjct: 308 TMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 363
>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
gi|548860608|gb|ERN18175.1| hypothetical protein
AMTR_s00054p00174840 [Amborella trichopoda]
Length = 359
Score = 565 bits (1455), Expect = e-158
Identities = 291/358 (81%), Positives = 318/358 (88%), Gaps = 9/358 (2%)
Frame = -2
Query: 1204 SPMEIDGSDDP----IKPNKGKNI----IVPGKATPWVEKYRPQSLADVAAHRDIIDTID 1049
SPM++D + ++ KGK + ++P KATPWVEKYRPQSLADVAAH+DIIDT+D
Sbjct: 3 SPMDVDVEREQDMRYLQTGKGKVVEREQLLP-KATPWVEKYRPQSLADVAAHKDIIDTVD 61
Query: 1048 RLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQ 869
RLTNE +LPHLLLYGPPGTGKTST+LAVARKLYG NMILELNASDDRGID+VRQQIQ
Sbjct: 62 RLTNENRLPHLLLYGPPGTGKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQIQ 121
Query: 868 DFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 692
DFASTQSFSFG KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP
Sbjct: 122 DFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 181
Query: 691 ALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQST 512
ALQSRCTRFRFAPLDA HV ERL+YVI AEGL+VDE+GL+A+VRLSNGDMRKALNILQST
Sbjct: 182 ALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQST 241
Query: 511 HMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVRE 332
HMAS+H++E+AVYLCTGNPMPKD+EQIS WLLNE F TS+KYI +MK KGLALVDIVRE
Sbjct: 242 HMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIVRE 301
Query: 331 VMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAAK 158
V MFIF IKMPS +RV LINDLADIEYR+SFGCNDKLQLGSLI SFT R AM AAAK
Sbjct: 302 VTMFIFMIKMPSTVRVQLINDLADIEYRLSFGCNDKLQLGSLIGSFTHVRCAMEAAAK 359
>ref|XP_006390087.1| hypothetical protein EUTSA_v10018756mg [Eutrema salsugineum]
gi|557086521|gb|ESQ27373.1| hypothetical protein
EUTSA_v10018756mg [Eutrema salsugineum]
Length = 361
Score = 564 bits (1453), Expect = e-158
Identities = 292/361 (80%), Positives = 320/361 (88%), Gaps = 7/361 (1%)
Frame = -2
Query: 1219 MAEIISPMEIDGSDDPIKP--NKGKNIIVPG-----KATPWVEKYRPQSLADVAAHRDII 1061
M +I S M+ID ++ + NKGK+I G KATPWVEKYRPQSL DVAAHRDII
Sbjct: 1 MTDITSAMDIDVDENHSRKPSNKGKDIAGFGGPPQSKATPWVEKYRPQSLDDVAAHRDII 60
Query: 1060 DTIDRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVR 881
DTIDRLTNE KLPHLLLYGPPGTGKTSTILAVARKLYG +Y NMILELNASDDRGID+VR
Sbjct: 61 DTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVR 120
Query: 880 QQIQDFASTQSFSFGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 701
QQIQDFASTQSFS GKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALI NHVNK
Sbjct: 121 QQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNK 180
Query: 700 IIPALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNIL 521
IIPALQSRCTRFRFAPLD HV++RLK+VI+AEGL+V E+GL ALVRLSNGDMRKA+NIL
Sbjct: 181 IIPALQSRCTRFRFAPLDPVHVSQRLKHVIEAEGLDVSESGLAALVRLSNGDMRKAMNIL 240
Query: 520 QSTHMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDI 341
QST+MASE ITEE VYLCTGNP+P DIEQIS+WLLNE F S+K I EMK RKGLA+VDI
Sbjct: 241 QSTNMASEKITEEEVYLCTGNPLPMDIEQISHWLLNEPFAESYKNISEMKTRKGLAIVDI 300
Query: 340 VREVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
VREV MF+FKI MPS++RV LINDLADIEYR+SFGCNDKLQLG++IS+FT ARSA+VAAA
Sbjct: 301 VREVTMFVFKISMPSNVRVQLINDLADIEYRLSFGCNDKLQLGAIISTFTHARSALVAAA 360
Query: 160 K 158
K
Sbjct: 361 K 361
>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
Length = 362
Score = 564 bits (1453), Expect = e-158
Identities = 285/354 (80%), Positives = 320/354 (90%), Gaps = 6/354 (1%)
Frame = -2
Query: 1204 SPMEIDGSDDPIKPN----KGKNII-VPGKATPWVEKYRPQSLADVAAHRDIIDTIDRLT 1040
+PM+ID + P P KGK ++ G+A PWVEKYRPQSLADVAAHRDI+DTIDRLT
Sbjct: 8 APMDIDAAAPPPPPPGAAAKGKALLSAGGRAAPWVEKYRPQSLADVAAHRDIVDTIDRLT 67
Query: 1039 NEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQDFA 860
NE +LPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASD+RGID+VRQQIQDFA
Sbjct: 68 NENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFA 127
Query: 859 STQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ 683
+S SFG + SVKLVLLDEADAMTKDAQFALRRVIEKYT+STRFALICNHVNKIIPALQ
Sbjct: 128 GARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQ 187
Query: 682 SRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQSTHMA 503
SRCTRFRFAPLD +HV ERL+++I +EGL+VD+ GLTALVRLSNGDMRKALNILQSTHMA
Sbjct: 188 SRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMA 247
Query: 502 SEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVREVMM 323
S+ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSFKYI +MKMRKGLALVDI+REV M
Sbjct: 248 SQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTM 307
Query: 322 FIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
F+FKI+MPSD+RV LIN+LADIEYR+SF CNDKLQLG+LIS+FT R+AMVAAA
Sbjct: 308 FVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361
>ref|XP_004954087.1| PREDICTED: replication factor C subunit 5-like [Setaria italica]
Length = 361
Score = 563 bits (1452), Expect = e-158
Identities = 285/358 (79%), Positives = 321/358 (89%), Gaps = 6/358 (1%)
Frame = -2
Query: 1216 AEIISPMEIDGSDDPIKPN----KGKNII-VPGKATPWVEKYRPQSLADVAAHRDIIDTI 1052
A +PM++D + P P KGK + PG+A PWVEKYRPQSLADVAAHRDI+DTI
Sbjct: 4 ATAATPMDVDAAAPPPPPAGAAAKGKAPLNAPGRAAPWVEKYRPQSLADVAAHRDIVDTI 63
Query: 1051 DRLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQI 872
DRLTNE +LPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASD+RGID+VR QI
Sbjct: 64 DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRLQI 123
Query: 871 QDFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKII 695
QDFA +S SFG + SVKLVLLDEADAMTKDAQFALRRVIEKYT+STRFALICNHVNKII
Sbjct: 124 QDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKII 183
Query: 694 PALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQS 515
PALQSRCTRFRFAPLD +HV ERL+++I +EGL+VDE GLTALVRLSNGDMRKALNILQS
Sbjct: 184 PALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQS 243
Query: 514 THMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVR 335
THMAS+ ITEEAVYLCTGNPMPKDIE+I++WLLNE F+TSFK+I +MKMRKGLALVDI+R
Sbjct: 244 THMASQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFKHISDMKMRKGLALVDIIR 303
Query: 334 EVMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
EV MF+FKI+MPSD+RV LINDLADIEYR+SF CNDKLQLG+LIS+FT AR+AMVAA+
Sbjct: 304 EVTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTSARTAMVAAS 361
>ref|XP_007137424.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
gi|561010511|gb|ESW09418.1| hypothetical protein
PHAVU_009G126000g [Phaseolus vulgaris]
Length = 359
Score = 563 bits (1450), Expect = e-158
Identities = 288/354 (81%), Positives = 318/354 (89%), Gaps = 7/354 (1%)
Frame = -2
Query: 1201 PMEIDGSDDPIKPNKGKNII----VPG--KATPWVEKYRPQSLADVAAHRDIIDTIDRLT 1040
PMEID D + G+ +I +P KA PWVEKYRPQSL DVAAHRDI+DTID+LT
Sbjct: 5 PMEIDSDGDDHTHSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTIDKLT 64
Query: 1039 NEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQDFA 860
E +LPHLLLYGPPGTGKTSTILAVARKLYG+++ NMILELNASDDRGID+VRQQIQDFA
Sbjct: 65 TENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQIQDFA 124
Query: 859 STQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ 683
STQS SFG K SVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ
Sbjct: 125 STQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQ 184
Query: 682 SRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQSTHMA 503
SRCTRFRFAPLDA HVTER+K+VI AEGL+V ++GL ALVRLSNGDMRKALNILQSTHMA
Sbjct: 185 SRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQSTHMA 244
Query: 502 SEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVREVMM 323
++ ITEEA+YLCTGNP+PKDIEQISYWLLNE +T SFK I EMK RKGLALVDI+REV+M
Sbjct: 245 TQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDIIREVIM 304
Query: 322 FIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
F+FKIKMPS +RV L+NDLADIEYR+SFGCNDKLQLGS+I+SFTRARSA+VAAA
Sbjct: 305 FVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358
>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
Full=Replication factor C subunit 3; Short=OsRFC3;
AltName: Full=Activator 1 subunit 3
gi|46805779|dbj|BAD17147.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|46806135|dbj|BAD17365.1| putative replication factor C
36kDa subunit [Oryza sativa Japonica Group]
gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218191668|gb|EEC74095.1| hypothetical protein
OsI_09136 [Oryza sativa Indica Group]
Length = 361
Score = 563 bits (1450), Expect = e-158
Identities = 287/357 (80%), Positives = 320/357 (89%), Gaps = 5/357 (1%)
Frame = -2
Query: 1216 AEIISPMEIDGSDDPI-KPNKGKNIIVP---GKATPWVEKYRPQSLADVAAHRDIIDTID 1049
A +PM+ID + P KGK + G+A PWVEKYRPQSL DVAAHRDI+DTID
Sbjct: 4 ATAATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTID 63
Query: 1048 RLTNEKKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQ 869
RLTNE +LPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASD+RGID+VRQQIQ
Sbjct: 64 RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQ 123
Query: 868 DFASTQSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 692
DFAS +S SFG K SVK+VLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIP
Sbjct: 124 DFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIP 183
Query: 691 ALQSRCTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQST 512
ALQSRCTRFRFAPLD THV ERLK++I +EGL+VD+ GLTALVRLSNGDMRKALNILQST
Sbjct: 184 ALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQST 243
Query: 511 HMASEHITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVRE 332
HMAS+ ITEEAVYLCTGNPMPKDIEQI+YWLLNE+F+TSFK I +MKMRKGLALVDI+RE
Sbjct: 244 HMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIRE 303
Query: 331 VMMFIFKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
V MF+FKI+MPSD+R+ LINDLADIEYR+SF CNDKLQLG+LIS+FT AR+AMVAAA
Sbjct: 304 VTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360
>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi|194696262|gb|ACF82215.1|
unknown [Zea mays] gi|413939151|gb|AFW73702.1|
replication factor C subunit 3 [Zea mays]
Length = 362
Score = 561 bits (1446), Expect = e-157
Identities = 285/352 (80%), Positives = 317/352 (90%), Gaps = 6/352 (1%)
Frame = -2
Query: 1198 MEIDGSDDPIKPN----KGKN-IIVPGKATPWVEKYRPQSLADVAAHRDIIDTIDRLTNE 1034
M+ID + P P KGK + G+A PWVEKYRPQSLADVAAHRDI+DTIDRLTNE
Sbjct: 10 MDIDAAAPPPPPPGAAAKGKAPLSAGGRAAPWVEKYRPQSLADVAAHRDIVDTIDRLTNE 69
Query: 1033 KKLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDIVRQQIQDFAST 854
+LPHLLLYGPPGTGKTSTILAVARKLYG+QY NMILELNASD+RGID+VRQQIQDFA
Sbjct: 70 NRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQIQDFAGA 129
Query: 853 QSFSFG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSR 677
+S SFG + SVKLVLLDEADAMTKDAQFALRRVIEKYT+STRFALICNHVNKIIPALQSR
Sbjct: 130 RSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSR 189
Query: 676 CTRFRFAPLDATHVTERLKYVIDAEGLNVDENGLTALVRLSNGDMRKALNILQSTHMASE 497
CTRFRFAPLD +HV ERL+++I +EGL+VD+ GLTALVRLSNGDMRKALNILQSTHMAS+
Sbjct: 190 CTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQSTHMASQ 249
Query: 496 HITEEAVYLCTGNPMPKDIEQISYWLLNEAFTTSFKYIFEMKMRKGLALVDIVREVMMFI 317
ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSFKYI +MKMRKGLALVDI+REV MF+
Sbjct: 250 QITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIREVTMFV 309
Query: 316 FKIKMPSDIRVHLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSAMVAAA 161
FKI+MPSD+RV LINDLADIEYR+SF CNDKLQLG+LIS+FT R+AMVAAA
Sbjct: 310 FKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361