BLASTX nr result
ID: Akebia24_contig00003848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00003848
(371 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote... 54 3e-12
ref|XP_002315645.1| Photosystem II core complex proteins psbY [P... 54 6e-12
ref|XP_007044927.1| Photosystem II core complex proteins psbY [T... 52 2e-11
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides] 54 4e-11
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides] 54 4e-11
ref|XP_002312650.1| Photosystem II core complex proteins psbY [P... 54 5e-10
gb|ABK96593.1| unknown [Populus trichocarpa x Populus deltoides] 54 5e-10
ref|XP_002515034.1| photosystem II core complex proteins psbY, c... 55 2e-08
gb|ABK96594.1| unknown [Populus trichocarpa x Populus deltoides] 46 8e-08
ref|XP_004142959.1| PREDICTED: photosystem II core complex prote... 43 1e-06
ref|XP_006484003.1| PREDICTED: photosystem II core complex prote... 57 2e-06
ref|XP_006438168.1| hypothetical protein CICLE_v10032789mg [Citr... 57 2e-06
>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Vitis vinifera]
Length = 201
Score = 53.5 bits (127), Expect(2) = 3e-12
Identities = 29/60 (48%), Positives = 31/60 (51%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG FSTLSSCD A GDNRG +NILQPALNQ+
Sbjct: 63 GTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPALNQL 122
Score = 43.5 bits (101), Expect(2) = 3e-12
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSINS N +KPT KPISLLS+
Sbjct: 11 LNAKCLSINSPKNLNLSKPTAKPISLLSI 39
>ref|XP_002315645.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
x Populus deltoides] gi|222864685|gb|EEF01816.1|
Photosystem II core complex proteins psbY [Populus
trichocarpa]
Length = 196
Score = 53.9 bits (128), Expect(2) = 6e-12
Identities = 29/60 (48%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG F+TLSSC+ AF GDNRG +NILQPALNQI
Sbjct: 59 GTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQI 118
Score = 42.0 bits (97), Expect(2) = 6e-12
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSINS + TKP+ KP+SLLS+
Sbjct: 11 LNAKCLSINSNKNISPTKPSTKPVSLLSM 39
>ref|XP_007044927.1| Photosystem II core complex proteins psbY [Theobroma cacao]
gi|508708862|gb|EOY00759.1| Photosystem II core complex
proteins psbY [Theobroma cacao]
Length = 201
Score = 52.0 bits (123), Expect(2) = 2e-11
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG FSTLSSC+ AF GDNRG +NIL+PALNQ+
Sbjct: 63 GTAIAGAVFSTLSSCNPAFAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILRPALNQL 122
Score = 42.0 bits (97), Expect(2) = 2e-11
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSI+S N TKP+ KPISLLS+
Sbjct: 11 LNAKCLSISSNKTINPTKPSAKPISLLSM 39
>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 196
Score = 53.9 bits (128), Expect(2) = 4e-11
Identities = 29/60 (48%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG F+TLSSC+ AF GDNRG +NILQPALNQI
Sbjct: 59 GTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQI 118
Score = 39.3 bits (90), Expect(2) = 4e-11
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSINS + KP+ KP+SLLS+
Sbjct: 11 LNAKCLSINSIKNISPPKPSTKPVSLLSM 39
>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 196
Score = 53.9 bits (128), Expect(2) = 4e-11
Identities = 29/60 (48%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG F+TLSSC+ AF GDNRG +NILQPALNQI
Sbjct: 59 GTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQI 118
Score = 39.3 bits (90), Expect(2) = 4e-11
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSINS + KP+ KP+SLLS+
Sbjct: 11 LNAKCLSINSIKNISPPKPSTKPVSLLSM 39
>ref|XP_002312650.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
gi|222852470|gb|EEE90017.1| Photosystem II core complex
proteins psbY [Populus trichocarpa]
Length = 192
Score = 53.5 bits (127), Expect(2) = 5e-10
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG F+TLSSC+ AF GDNRG +NILQPALNQ+
Sbjct: 56 GTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQV 115
Score = 35.8 bits (81), Expect(2) = 5e-10
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSIN+ N KP KPI LL++
Sbjct: 8 LNAKCLSINANKNTNPIKPPTKPIYLLAM 36
>gb|ABK96593.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 192
Score = 53.5 bits (127), Expect(2) = 5e-10
Identities = 28/60 (46%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG F+TLSSC+ AF GDNRG +NILQPALNQ+
Sbjct: 56 GTAIAGAIFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQV 115
Score = 35.8 bits (81), Expect(2) = 5e-10
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSIN+ N KP KPI LL++
Sbjct: 8 LNAKCLSINANKNTNPIKPPTKPIYLLAM 36
>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
[Ricinus communis] gi|223546085|gb|EEF47588.1|
photosystem II core complex proteins psbY, chloroplast
precursor [Ricinus communis]
Length = 195
Score = 55.1 bits (131), Expect(2) = 2e-08
Identities = 30/60 (50%), Positives = 32/60 (53%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG FSTLSSCD AF GDNRG +NIL+PALNQI
Sbjct: 56 GTAIAGAIFSTLSSCDPAFAAQQIAEIAEGDNRGLALLLPIIPALGWVLFNILRPALNQI 115
Score = 29.3 bits (64), Expect(2) = 2e-08
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLS ++ K + T KPISLLS+
Sbjct: 7 LNTKCLSNINSGKNINKPTTTKPISLLSM 35
>gb|ABK96594.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 192
Score = 46.2 bits (108), Expect(2) = 8e-08
Identities = 25/60 (41%), Positives = 29/60 (48%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG F+ LSS + AF GDNRG +NILQP LNQ+
Sbjct: 56 GTAIAGAIFTALSSSEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPTLNQV 115
Score = 35.8 bits (81), Expect(2) = 8e-08
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSL 142
LN+KCLSIN+ N KP KPI LL++
Sbjct: 8 LNAKCLSINANKNTNPIKPPTKPIYLLAM 36
>ref|XP_004142959.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Cucumis sativus]
gi|449494514|ref|XP_004159566.1| PREDICTED: photosystem
II core complex proteins psbY, chloroplastic-like
[Cucumis sativus]
Length = 253
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 27/60 (45%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 193 TAIAGIFFSTLSSCDSAFXXXXXXXXXX-GDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
TAIAG F+TL S D AF GDNRG +NILQPALNQI
Sbjct: 115 TAIAGAVFATLGSSDPAFAAQQIAEIAADGDNRGLALLLPLIPAVAWVLFNILQPALNQI 174
Score = 35.4 bits (80), Expect(2) = 1e-06
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 56 LNSKCLSINSTNKFNSTKPTIKPISLLSLXXXXXQIIQTYRLRYPELPLLVSS 214
L+ KC SINST N+ K KPISLLSL +I + + L +SS
Sbjct: 62 LSVKCTSINSTKTHNTQKIIPKPISLLSLQNLPKGLISSKSNQNSNLSTFLSS 114
>ref|XP_006484003.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Citrus sinensis]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/60 (51%), Positives = 33/60 (55%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG FSTLSSCD+AF GDNRG +NILQPALNQI
Sbjct: 60 GTAIAGAIFSTLSSCDAAFAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQI 119
>ref|XP_006438168.1| hypothetical protein CICLE_v10032789mg [Citrus clementina]
gi|557540364|gb|ESR51408.1| hypothetical protein
CICLE_v10032789mg [Citrus clementina]
Length = 200
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/60 (51%), Positives = 33/60 (55%)
Frame = +1
Query: 190 GTAIAGIFFSTLSSCDSAFXXXXXXXXXXGDNRGXXXXXXXXXXXXXXXYNILQPALNQI 369
GTAIAG FSTLSSCD+AF GDNRG +NILQPALNQI
Sbjct: 60 GTAIAGAIFSTLSSCDAAFAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQI 119