BLASTX nr result
ID: Akebia24_contig00003603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00003603
(313 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II su... 107 2e-21
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ... 107 2e-21
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 107 2e-21
ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 ... 107 2e-21
ref|XP_006826404.1| hypothetical protein AMTR_s00004p00150370 [A... 107 2e-21
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 106 3e-21
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 106 3e-21
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 106 4e-21
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype... 106 4e-21
gb|AFK39298.1| unknown [Lotus japonicus] 105 5e-21
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g... 105 5e-21
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 104 1e-20
ref|XP_007016302.1| DNA-directed RNA polymerase II isoform 6 [Th... 103 2e-20
ref|XP_007016301.1| DNA-directed RNA polymerase II isoform 5 [Th... 103 2e-20
ref|XP_007016300.1| DNA-directed RNA polymerase II isoform 4 [Th... 103 2e-20
ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Th... 103 2e-20
ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Th... 103 2e-20
ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep... 103 2e-20
ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polype... 103 2e-20
ref|NP_200726.1| DNA-directed RNA polymerase II subunit RPB7 [Ar... 102 4e-20
>ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum]
Length = 176
Score = 107 bits (267), Expect = 2e-21
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPRYFG NLRD LVSKLMKDVEGTCSGRHGFVVA+TG++NI
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI 54
>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform X1 [Glycine
max] gi|502141876|ref|XP_004504682.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum] gi|571455285|ref|XP_006580040.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Glycine max] gi|593791778|ref|XP_007158928.1|
hypothetical protein PHAVU_002G193600g [Phaseolus
vulgaris] gi|593791780|ref|XP_007158929.1| hypothetical
protein PHAVU_002G193600g [Phaseolus vulgaris]
gi|593791782|ref|XP_007158930.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|1173137|sp|P46279.1|RPB7_SOYBN RecName:
Full=DNA-directed RNA polymerase II subunit RPB7;
Short=RNA polymerase II subunit B7
gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
gi|255626843|gb|ACU13766.1| unknown [Glycine max]
gi|558695762|gb|AHA84235.1| DNA-directed RNA polymerase
II subunit RPB7 [Phaseolus vulgaris]
gi|561032343|gb|ESW30922.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032344|gb|ESW30923.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032345|gb|ESW30924.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
Length = 176
Score = 107 bits (267), Expect = 2e-21
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPRYFG NLRD LVSKLMKDVEGTCSGRHGFVVA+TG++NI
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI 54
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 107 bits (267), Expect = 2e-21
Identities = 49/57 (85%), Positives = 56/57 (98%)
Frame = +3
Query: 141 QPKMFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
+ +MFFHIVLERNMQLHPR+FGP+LRDKLV+KLMKDVEGTCSGRHGFVVAITGV++I
Sbjct: 57 EEEMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDI 113
>ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 [Medicago truncatula]
gi|217071674|gb|ACJ84197.1| unknown [Medicago
truncatula] gi|355509557|gb|AES90699.1| DNA-directed RNA
polymerase II subunit RPB7 [Medicago truncatula]
gi|388514911|gb|AFK45517.1| unknown [Medicago
truncatula]
Length = 176
Score = 107 bits (267), Expect = 2e-21
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPRYFG NLRD LVSKLMKDVEGTCSGRHGFVVA+TG++NI
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI 54
>ref|XP_006826404.1| hypothetical protein AMTR_s00004p00150370 [Amborella trichopoda]
gi|548830718|gb|ERM93641.1| hypothetical protein
AMTR_s00004p00150370 [Amborella trichopoda]
Length = 147
Score = 107 bits (266), Expect = 2e-21
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHI LERNMQLHPR+FGP+LRDKL++KLMKDVEGTCSGRHGFVVAITGVDNI
Sbjct: 1 MFFHINLERNMQLHPRHFGPHLRDKLIAKLMKDVEGTCSGRHGFVVAITGVDNI 54
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 177
Score = 106 bits (265), Expect = 3e-21
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FGP+LRDKLV+KLMKDVEGTCSGRHGFVVAITGV++I
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDI 54
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 106 bits (265), Expect = 3e-21
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FGP+LRDKLV+KLMKDVEGTCSGRHGFVVAITGV++I
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDI 54
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 106 bits (264), Expect = 4e-21
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FGP+LRDKLVSKL+KDVEGTCSGRHGFVVAITGV++I
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDI 54
>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
gi|242056199|ref|XP_002457245.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|242090461|ref|XP_002441063.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|514750630|ref|XP_004962151.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Setaria italica]
gi|194708012|gb|ACF88090.1| unknown [Zea mays]
gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|241929220|gb|EES02365.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|241946348|gb|EES19493.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 177
Score = 106 bits (264), Expect = 4e-21
Identities = 49/54 (90%), Positives = 54/54 (100%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FGP+LRDKLVSKL+KDVEGTCSGRHGFVVAITGV++I
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDI 54
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 105 bits (263), Expect = 5e-21
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPRYFG NLRD LV+KLMKDVEGTCSGRHGFVVA+TG++N+
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENV 54
>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
gi|50878367|gb|AAT85142.1| putative RNA polymerase II
subunit 5 [Oryza sativa Japonica Group]
gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
protein OsI_19896 [Oryza sativa Indica Group]
gi|215704281|dbj|BAG93121.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218196761|gb|EEC79188.1| hypothetical protein
OsI_19893 [Oryza sativa Indica Group]
gi|222631528|gb|EEE63660.1| hypothetical protein
OsJ_18478 [Oryza sativa Japonica Group]
Length = 177
Score = 105 bits (263), Expect = 5e-21
Identities = 48/54 (88%), Positives = 54/54 (100%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FGP+LRDKLVSKL+KDVEGTCSGRHGFVVAITGV+++
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDV 54
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449518487|ref|XP_004166273.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 176
Score = 104 bits (259), Expect = 1e-20
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++NI
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENI 54
>ref|XP_007016302.1| DNA-directed RNA polymerase II isoform 6 [Theobroma cacao]
gi|508786665|gb|EOY33921.1| DNA-directed RNA polymerase
II isoform 6 [Theobroma cacao]
Length = 173
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++N+
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENV 54
>ref|XP_007016301.1| DNA-directed RNA polymerase II isoform 5 [Theobroma cacao]
gi|508786664|gb|EOY33920.1| DNA-directed RNA polymerase
II isoform 5 [Theobroma cacao]
Length = 174
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++N+
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENV 54
>ref|XP_007016300.1| DNA-directed RNA polymerase II isoform 4 [Theobroma cacao]
gi|508786663|gb|EOY33919.1| DNA-directed RNA polymerase
II isoform 4 [Theobroma cacao]
Length = 157
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++N+
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENV 54
>ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Theobroma cacao]
gi|508786662|gb|EOY33918.1| DNA-directed RNA polymerase
II isoform 3 [Theobroma cacao]
Length = 173
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++N+
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENV 54
>ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
gi|508786660|gb|EOY33916.1| DNA-directed RNA polymerase
II isoform 1 [Theobroma cacao]
Length = 176
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++N+
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENV 54
>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223540340|gb|EEF41911.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPRYFG NLR+ LVSKLMKDVEGTCSGRHGFVVAITG++++
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESV 54
>ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polypeptide family protein
[Populus trichocarpa] gi|222846170|gb|EEE83717.1|
DNA-directed RNA polymerase II 19 kDa polypeptide family
protein [Populus trichocarpa]
Length = 176
Score = 103 bits (258), Expect = 2e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NLR+ +VSKLMKDVEGTCSGRHGFVVAITG++NI
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENI 54
>ref|NP_200726.1| DNA-directed RNA polymerase II subunit RPB7 [Arabidopsis thaliana]
gi|585917|sp|P38421.1|NRPB7_ARATH RecName:
Full=DNA-directed RNA polymerase II subunit 7; Short=RNA
polymerase II subunit B7 gi|166854|gb|AAA32861.1| RNA
polymerase II [Arabidopsis thaliana]
gi|9759239|dbj|BAB09763.1| DNA-directed RNA polymerase
II 19 kD polypeptide (RNA polymerase II subunit 5)
[Arabidopsis thaliana] gi|26452908|dbj|BAC43532.1|
putative RNA polymerase II [Arabidopsis thaliana]
gi|28973525|gb|AAO64087.1| putative RNA polymerase II
[Arabidopsis thaliana] gi|332009771|gb|AED97154.1|
DNA-directed RNA polymerase II subunit RPB7 [Arabidopsis
thaliana]
Length = 176
Score = 102 bits (255), Expect = 4e-20
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +3
Query: 150 MFFHIVLERNMQLHPRYFGPNLRDKLVSKLMKDVEGTCSGRHGFVVAITGVDNI 311
MFFHIVLERNMQLHPR+FG NL++ LVSKLMKDVEGTCSGRHGFVVAITG+D I
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTI 54