BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00001067
         (1146 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26820.3| unnamed protein product [Vitis vinifera]              531   e-148
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   531   e-148
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   530   e-148
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   526   e-147
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       522   e-145
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...   519   e-144
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   513   e-143
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   510   e-142
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   509   e-142
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   509   e-141
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      507   e-141
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      504   e-140
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   502   e-139
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       502   e-139
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   499   e-138
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   497   e-138
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   496   e-138
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       496   e-138
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   496   e-138
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              494   e-137

>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  531 bits (1367), Expect = e-148
 Identities = 256/339 (75%), Positives = 287/339 (84%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WD +LIP +Q+ PMDYTPA + +LDHDV 
Sbjct: 581  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVM 640

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYIVNDSLGIIANAHT FADKE  KA  + C ELA LFSIAVDFPKTGVPA
Sbjct: 641  IEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPA 700

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP +L VKE+PDFMEK DKPTYES  VIGKLFREVKDIAP    I+SFT++VAR SYD 
Sbjct: 701  EIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDP 760

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEV GFEDY+ +AFYYK EYD+KLGNLMDYYGIKTESEILSGSIM+ S+ FDRRKDA+A
Sbjct: 761  DMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEA 820

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AV++L+KEARTWF+ K G+E  S+ DD+YAKASAWYHVTYH  YWGCYN+G+DRDHF
Sbjct: 821  IGLAVKSLRKEARTWFN-KMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHF 879

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRL 128
            LSFPWCVY+KLI+ KR K S +     SLE +   GLRL
Sbjct: 880  LSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 918


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  531 bits (1367), Expect = e-148
 Identities = 256/339 (75%), Positives = 287/339 (84%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WD +LIP +Q+ PMDYTPA + +LDHDV 
Sbjct: 783  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVM 842

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYIVNDSLGIIANAHT FADKE  KA  + C ELA LFSIAVDFPKTGVPA
Sbjct: 843  IEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPA 902

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP +L VKE+PDFMEK DKPTYES  VIGKLFREVKDIAP    I+SFT++VAR SYD 
Sbjct: 903  EIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDP 962

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEV GFEDY+ +AFYYK EYD+KLGNLMDYYGIKTESEILSGSIM+ S+ FDRRKDA+A
Sbjct: 963  DMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEA 1022

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AV++L+KEARTWF+ K G+E  S+ DD+YAKASAWYHVTYH  YWGCYN+G+DRDHF
Sbjct: 1023 IGLAVKSLRKEARTWFN-KMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHF 1081

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRL 128
            LSFPWCVY+KLI+ KR K S +     SLE +   GLRL
Sbjct: 1082 LSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 1120


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  530 bits (1366), Expect = e-148
 Identities = 253/339 (74%), Positives = 286/339 (84%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP +Q  PMDYTPAQS+ LDHDV 
Sbjct: 797  VDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQ 856

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IE+V+EYFTNYIVNDSLGIIANAHT FAD+EP KA S  C++LA  FSIAVDFPKTGVPA
Sbjct: 857  IEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPA 916

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP HL+VKE+PDFMEK DKPTYES  VIGKLFR VKDIAP  SCI+ FTKEVAR SYD 
Sbjct: 917  EIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDP 976

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFED+ID+A Y+KG YD+KLGNLMDYYGIKTE+EIL+GSIMK S+ F +R+DA+A
Sbjct: 977  DMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEA 1036

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AVRAL+KEAR WF  K+G++     DD YAKASAWYHVTYH  YWGCYN G++RDHF
Sbjct: 1037 IGMAVRALRKEARAWFKEKSGSDTE---DDAYAKASAWYHVTYHPDYWGCYNHGMNRDHF 1093

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRL 128
            LSFPWCVY++L+ IK+DK S   +   +LE QFR GLR+
Sbjct: 1094 LSFPWCVYDRLVEIKKDKTSIGNAF-PALEQQFRQGLRM 1131


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  526 bits (1356), Expect = e-147
 Identities = 253/342 (73%), Positives = 290/342 (84%), Gaps = 2/342 (0%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIP +Q+ PMDYTP   + LDHDVT
Sbjct: 793  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVT 852

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYIVNDSLG+IANAHTA ADKE LKA S  C+ELA  FSIAVDFPKTGVPA
Sbjct: 853  IEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPA 912

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIPS+L  +E+PDFMEK DKP+YES  VIGKLFREVKDIAP+ S I+SFT +VAR  YD 
Sbjct: 913  EIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDP 972

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFEDYID+AFYYK  YD+KLGNLM+YYGIKTE+E+LSGS MK S+ F +++DA+A
Sbjct: 973  DMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEA 1032

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AVR+LKKEAR+WF+ K G+ L SQ DD+ AKASAWYHVTYH  YWGCYN+G++RDHF
Sbjct: 1033 IGMAVRSLKKEARSWFNEK-GSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHF 1091

Query: 244  LSFPWCVYNKLINIKRDKNSK-KRSL-NQSLENQFRFGLRLS 125
            LSFPWCVY+KLI IKR  +++ +RSL   S+E QF  GL LS
Sbjct: 1092 LSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHLS 1133


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  522 bits (1344), Expect = e-145
 Identities = 250/340 (73%), Positives = 284/340 (83%), Gaps = 1/340 (0%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP++Q +PMDY+PA +  LDHDV 
Sbjct: 794  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVR 853

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEVQEYFTNYIVNDSLGIIANAHTAFADKEP KA S +CIELA LFSIAVDFPKTGVPA
Sbjct: 854  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPA 913

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
             IP  L+VKE+PDFMEKL+KPTYES  VIGKLFREVKDIAP    +  FTKEVA  SYD 
Sbjct: 914  VIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDP 973

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DME DGFEDYID+AFYYK  YD+KLGNL+DYYGIK+E+EI+ GSIM+ S+ F +R+DA++
Sbjct: 974  DMEYDGFEDYIDDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIMRMSKSFTKRRDAES 1033

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVRAL+KEARTWF+ K G+ L S  DD+YAKASAWY+VTYH  YWGCYN+G++RDH+
Sbjct: 1034 INMAVRALRKEARTWFNEK-GSSLDSAADDVYAKASAWYYVTYHHSYWGCYNEGMNRDHY 1092

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLN-QSLENQFRFGLRL 128
            LSFPWCVY+KL+ IKR K S +RSL   SLE  F   L L
Sbjct: 1093 LSFPWCVYDKLVQIKRSKASVRRSLQMSSLERAFDRRLHL 1132


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
            gi|462422197|gb|EMJ26460.1| hypothetical protein
            PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  519 bits (1336), Expect = e-144
 Identities = 248/341 (72%), Positives = 287/341 (84%), Gaps = 1/341 (0%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP RQ++PMDYTPA ++ LDH VT
Sbjct: 469  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDDELIPSRQIQPMDYTPAPTIALDHAVT 528

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYF NY+VNDSLGIIANAHTAFAD++P KA S  CIELA LFSIAVDFPKTGVPA
Sbjct: 529  IEEVEEYFVNYMVNDSLGIIANAHTAFADRQPSKAMSKPCIELAKLFSIAVDFPKTGVPA 588

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
             IP HL VKEFPDFMEK DKPTY+S  VIG+LFREVKD+ P    I+SF++EVAR SYD 
Sbjct: 589  IIPQHLRVKEFPDFMEKPDKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDR 648

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFEDYI++AFYYK  YD  LGNL+DYYGIKTE+EILSGS+MK S+ F +R+D D 
Sbjct: 649  DMEVDGFEDYIEDAFYYKSNYDSILGNLLDYYGIKTEAEILSGSVMKMSKSFTKRRDIDP 708

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEARTWF+ K  T L S  DD+YAKASAWYHVTYH KY+GCYN+GL+RDHF
Sbjct: 709  INMAVRSLRKEARTWFNEK-ATGLDSGADDVYAKASAWYHVTYHPKYFGCYNEGLNRDHF 767

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLN-QSLENQFRFGLRLS 125
            +SFPWCVY+KL++IK++K S +R+ N  SLE +FR  L L+
Sbjct: 768  ISFPWCVYDKLVHIKKEKASVRRARNLSSLERRFRNDLHLN 808


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  513 bits (1321), Expect = e-143
 Identities = 248/339 (73%), Positives = 284/339 (83%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFP+ GKRPHPNECSGSDLDGDIYFV WD +LIP +QV+PMDY PA +  LDHDVT
Sbjct: 779  VDCVVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVT 838

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV++YFTNYIVNDSLGIIANAHT FADKEPL A S  C+ELA LFSIAVDF KTG+PA
Sbjct: 839  IEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIPA 898

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP HL VKE+PDFMEK DK  Y S RVIGKLFREVKDIAPQ S  +SFTKEVAR SYD 
Sbjct: 899  EIPPHLRVKEYPDFMEKPDKINYASSRVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDP 958

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFED+IDEAF +K EYD+KLGNLM+YYG+KTE+E+LSG IMK S+ FDRRKDA+A
Sbjct: 959  DMEVDGFEDHIDEAFLHKTEYDYKLGNLMEYYGVKTEAEVLSGGIMKMSKTFDRRKDAEA 1018

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IGAAVR+L+ EAR+WF  K GTE     DD+YAKASAWY+VTYH  Y+GCYN+G+ RDH+
Sbjct: 1019 IGAAVRSLRNEARSWF--KKGTE----ADDVYAKASAWYYVTYHPDYFGCYNEGMKRDHY 1072

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRL 128
            LSFPWCVY+KL+ IK+D NS++ S   SL  QF   +R+
Sbjct: 1073 LSFPWCVYDKLVKIKKD-NSRRASQMASLRRQFNDRVRI 1110


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  510 bits (1313), Expect = e-142
 Identities = 249/339 (73%), Positives = 280/339 (82%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WD +LIP +Q+ PMDYTPA +        
Sbjct: 325  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPT-------- 376

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
             +EV+EYFTNYIVNDSLGIIANAHT FADKE  KA  + C ELA LFSIAVDFPKTGVPA
Sbjct: 377  -KEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPA 435

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP +L VKE+PDFMEK DKPTYES  VIGKLFREVKDIAP    I+SFT++VAR SYD 
Sbjct: 436  EIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDP 495

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEV GFEDY+ +AFYYK EYD+KLGNLMDYYGIKTESEILSGSIM+ S+ FDRRKDA+A
Sbjct: 496  DMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEA 555

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AV++L+KEARTWF+ K G+E  S+ DD+YAKASAWYHVTYH  YWGCYN+G+DRDHF
Sbjct: 556  IGLAVKSLRKEARTWFN-KMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHF 614

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRL 128
            LSFPWCVY+KLI+ KR K S +     SLE +   GLRL
Sbjct: 615  LSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 653


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  509 bits (1312), Expect = e-142
 Identities = 242/339 (71%), Positives = 282/339 (83%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIP +Q+ PMDY+PA +  L+H+VT
Sbjct: 771  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVT 830

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYIVNDSLGIIANAHT FAD+EP KA S+ C  LA LFSIAVDFPKTGVPA
Sbjct: 831  IEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPA 890

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP  L VKE+PDFMEK DKPTY+S+ VIGKLFREVKD+AP    I+S T+E     YD 
Sbjct: 891  EIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDP 950

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDG+EDY+D+AFY+K  YD+KLGNLM+YYGIKTE+EILSG IMK SR F +++DA+A
Sbjct: 951  DMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEA 1010

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AVR+L+KEAR+WF+ K G  L S+ DDLYAKASAWYHVTYH  YWG YN+G++R+HF
Sbjct: 1011 IGVAVRSLRKEARSWFNEK-GNGLDSEADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHF 1069

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRL 128
            LSFPWCVY+KLI IK+   S++ S   SLE+ F  GLRL
Sbjct: 1070 LSFPWCVYDKLILIKKKVTSRRNSRLSSLESLFARGLRL 1108


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  509 bits (1310), Expect = e-141
 Identities = 249/333 (74%), Positives = 276/333 (82%), Gaps = 1/333 (0%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WDP+L+P RQ +PMDYTPA S  LDHDVT
Sbjct: 783  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVT 842

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYIVNDSLGIIANAH  FAD+EP  A S+ C +LA LFSIAVDFPKTGVPA
Sbjct: 843  IEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPA 902

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIPS L  KE+PDFMEK DKPTY S +VIGKLF++VKD  PQAS I +FT +VAR SYD 
Sbjct: 903  EIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDG 962

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DM V+GFEDYIDEAFYYK EYD KLGNLMDYYGIKTE+EILSG IMK S+ FDRRKDADA
Sbjct: 963  DMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDADA 1022

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AVR+L+KEARTWF R+      S  DD+ AKASAWYHVTYH  YWG YN+GL RDHF
Sbjct: 1023 IGVAVRSLRKEARTWFKRR------SDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRDHF 1076

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLN-QSLENQ 149
            +SFPWC+Y++LI IK+ K  KK  L+  SL NQ
Sbjct: 1077 ISFPWCIYDQLIQIKKAKARKKPVLHLSSLGNQ 1109


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  507 bits (1305), Expect = e-141
 Identities = 237/340 (69%), Positives = 287/340 (84%), Gaps = 1/340 (0%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGD+YFV WDPELIP +Q+ PMDY+PA +  LDH+VT
Sbjct: 771  VDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVT 830

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEE++EYFTNYIVNDSLGII+NAHTAFAD+EP KA S  C+ELA LFSIAVDFPKTGVPA
Sbjct: 831  IEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPA 890

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP  L VKE+PDFMEK DKP+Y+SH VIGKLFREVK++AP    IK  T+E  +  YD 
Sbjct: 891  EIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDP 950

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEV+GFEDYID+AF++K +YD+KLGNLMDYYG+KTE+EIL G IMK SR F +++DA+A
Sbjct: 951  DMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEA 1010

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEAR+WF+ K G+EL  + DD YAKASAWY+VTYH  YWG YN+G++RDHF
Sbjct: 1011 ISMAVRSLRKEARSWFNEK-GSELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHF 1069

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLN-QSLENQFRFGLRL 128
            LSFPWCVY+KLI IK++K + + +L+  SLE++F+ GL L
Sbjct: 1070 LSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHL 1109


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  504 bits (1299), Expect = e-140
 Identities = 236/340 (69%), Positives = 286/340 (84%), Gaps = 1/340 (0%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGD+YFV WDPELIP +Q+ PMDY+PA +  LDH+VT
Sbjct: 771  VDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVT 830

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEE++EYFTNYIVNDSLGII+NAHTAFAD+EP KA S  C+ELA LFSIAVDFPKTGVPA
Sbjct: 831  IEEIEEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPA 890

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP  L VKEFPDFMEK DKP+Y+S+ VIGKLFREVK++AP    IK  T+E  +  YD 
Sbjct: 891  EIPQELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDP 950

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEV+GF DYID+AF+YK +YD+KLGNLMDYYG+KTE+EILSG IMK SR F +++DA++
Sbjct: 951  DMEVEGFVDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAES 1010

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEAR+WF+ K G+EL  + DD YAKASAWY+VTYH  YWG YN+G++RDHF
Sbjct: 1011 ISMAVRSLRKEARSWFNEK-GSELDEEIDDAYAKASAWYYVTYHHSYWGQYNEGMNRDHF 1069

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLN-QSLENQFRFGLRL 128
            LSFPWCVY+KLI IK++K + + +L+  SLE++F+ G  L
Sbjct: 1070 LSFPWCVYDKLIQIKKEKAALREALDLSSLEHRFQRGFHL 1109


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
            1a [Cucumis sativus]
          Length = 1130

 Score =  502 bits (1293), Expect = e-139
 Identities = 236/336 (70%), Positives = 281/336 (83%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP RQ+ PMDYTPA    LD DVT
Sbjct: 790  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDVT 849

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
             E++QEYF NY+VNDSLGIIANAHTAFADKE  KA S+ C+ELA LFS+AVDFPKTGVPA
Sbjct: 850  TEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPA 909

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
             IPSHL+VKEFPDFMEK D+P+YES++VIGKLFR VKDIAP  S I+SFT++VAR  YD 
Sbjct: 910  IIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDC 969

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEV+GFEDY+++AFY+K  YD+KLGNL+DYYGIK+E+E+LSGSIM+ S+ F RR+DA+A
Sbjct: 970  DMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEA 1029

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEARTWF+ + G +  S  DDL+AKASAWY+VTYH  YWGCYN+G+ RDH+
Sbjct: 1030 INLAVRSLRKEARTWFNAREGAD--SNSDDLFAKASAWYYVTYHHSYWGCYNEGMKRDHY 1087

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFG 137
            LSFPWCVY+KL+ IK + N ++R     L +  RFG
Sbjct: 1088 LSFPWCVYDKLMQIK-ENNLRRRERAARLASFDRFG 1122


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  502 bits (1293), Expect = e-139
 Identities = 242/322 (75%), Positives = 270/322 (83%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WDP+LIP RQV+ MDYTPA +  LDHDVT
Sbjct: 782  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVT 841

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYI+NDSLGIIANAH  FAD+EP  A S+ C +LA LFSIAVDFPKTGVPA
Sbjct: 842  IEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPA 901

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIPS L  KE+PDFMEK DKPTY S +VIGKLF++VK+  PQAS I +FT++VAR SYDS
Sbjct: 902  EIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDS 961

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DM VDGFEDYIDEAFYYK EYD KLGNLMDYYGIKTE+EILSG IMK S+ FDRRKDA+A
Sbjct: 962  DMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEA 1021

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AVR L+KEAR WF R+      S  DD+ AKASAWYHVTYH  YWG YN+GL RDHF
Sbjct: 1022 IGVAVRCLRKEARAWFKRR------SDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDHF 1075

Query: 244  LSFPWCVYNKLINIKRDKNSKK 179
            +SFPWCVY++LI IK+ K  K+
Sbjct: 1076 ISFPWCVYDQLIQIKKAKARKR 1097


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  499 bits (1284), Expect = e-138
 Identities = 243/328 (74%), Positives = 271/328 (82%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WD ++IP RQV+PM+Y PA S+ LDHDVT
Sbjct: 780  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVT 839

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYIVNDSLGIIANAH  FAD+EP  A S+ C +LA LFSIAVDFPKTGVPA
Sbjct: 840  IEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPA 899

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIPS L  KE+PDFM+K DK +Y S RVIGKLFR+VKD APQAS I +FT++VAR SYD+
Sbjct: 900  EIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDA 959

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFEDYIDEAF YK EYD KLGNLMDYYGIKTE+EILSG IMK S+ FDRRKDA+A
Sbjct: 960  DMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEA 1019

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVRAL+KEAR WF R+N        DD+  KASAWYHVTYH  YWGCYN GL R HF
Sbjct: 1020 ISVAVRALRKEARAWFKRRNDI------DDMLPKASAWYHVTYHPTYWGCYNQGLKRAHF 1073

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQS 161
            +SFPWCVY++LI IK+DK   +  LN S
Sbjct: 1074 ISFPWCVYDQLIQIKKDKARNRPVLNLS 1101


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score =  497 bits (1280), Expect = e-138
 Identities = 237/340 (69%), Positives = 284/340 (83%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WDPELIP +Q++PMDYTPA  + +D DVT
Sbjct: 782  VDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVT 841

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYF NYIVNDSLGIIANAHT FAD +  KA S+ C++LA LFSIAVDFPKTGVPA
Sbjct: 842  IEEVEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPA 901

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP  L+ KE+PDFMEK DK TY SH VIG+LFREVKDIAP  S I SFT++VA   YD 
Sbjct: 902  EIPPELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDP 961

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFEDY+++AFY+KG YD+KLGN++DYYGIKTE+EILSGSIM  S+ F +R+DADA
Sbjct: 962  DMEVDGFEDYLEDAFYHKGNYDYKLGNMLDYYGIKTEAEILSGSIMTLSKSFTKRRDADA 1021

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AV++L+KEAR WF+ K+ T + S  DD+YAKASAWYHVTYH  Y+G YN+G++R HF
Sbjct: 1022 INVAVKSLRKEARAWFNEKD-TGIDSGDDDVYAKASAWYHVTYHPNYFGLYNEGMNRAHF 1080

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRLS 125
            +SFPWCV++KL +IK++K ++ R L  SLEN+ R+GLR S
Sbjct: 1081 ISFPWCVFDKLGHIKKEKVNQAR-LISSLENRLRYGLRFS 1119


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max]
          Length = 1125

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/340 (70%), Positives = 277/340 (81%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHPNECSGSDLDGDIYFV WD ELIP R + PMDYT   +V LDHDV 
Sbjct: 790  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDHELIPSRPIDPMDYTAPATVELDHDVM 849

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYF NYIVNDSLGIIANAHT FADKE LKA S+ C++LA LFS AVDFPKTGVPA
Sbjct: 850  IEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMSDQCVKLARLFSTAVDFPKTGVPA 909

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
             IP  LHVKE+PDFMEK DKPTY+SH VIGKLFREVK+I+  A  I SFTK VAR SYD 
Sbjct: 910  VIPPELHVKEYPDFMEKPDKPTYKSHNVIGKLFREVKEISTSAGSITSFTKLVARDSYDH 969

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            +MEVDGF DY+D+AFY+K  YD+KLGNLMDYYGIKTE+EIL G+IMK S+ F++R+DA+A
Sbjct: 970  EMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILGGNIMKMSKSFNKRRDAEA 1029

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEAR WF+  +  ++ S   D+YAKASAWYHVTYH  YWGCYN+G++RDH+
Sbjct: 1030 INMAVRSLRKEARAWFNENSSGDVDSGSSDVYAKASAWYHVTYHPSYWGCYNEGMNRDHY 1089

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSLENQFRFGLRLS 125
            LSF WCVY  L+ IK++K S +RS   SLE  F  GLRLS
Sbjct: 1090 LSFSWCVYPLLVQIKKEKLSIRRS---SLEYSFS-GLRLS 1125


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  496 bits (1278), Expect = e-138
 Identities = 237/309 (76%), Positives = 262/309 (84%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFV WDP+LIP RQV+PMDYTPA S+ LDHDVT
Sbjct: 473  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVT 532

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNY+VND LG+IANAH  FAD+EP  A S+ CIELA LFSIAVDFPKTGVPA
Sbjct: 533  IEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPA 592

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIPS L  KE+PDFMEK DK TY S +VIGKLFREVKD   QAS I +FT++VAR SYD+
Sbjct: 593  EIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVARRSYDT 652

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            D+EVDGFEDYIDEAF YK EYD KLGNLMDYYGIKTE+E LSG IMK S+ FDRR+DA+A
Sbjct: 653  DLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIMKASKTFDRRRDAEA 712

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            IG AVR+L+KEARTWF R+      S  DDL AKASAWYHV YH  YWGCYN+GL RDHF
Sbjct: 713  IGVAVRSLRKEARTWFKRR------SDIDDLLAKASAWYHVAYHPTYWGCYNEGLKRDHF 766

Query: 244  LSFPWCVYN 218
            +SFPWCVY+
Sbjct: 767  ISFPWCVYD 775


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  496 bits (1276), Expect = e-138
 Identities = 237/320 (74%), Positives = 270/320 (84%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHP+ECSGSDLDGDIYFV WD +LIP RQ+ PMDYTPA + +LDHDV 
Sbjct: 325  VDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVM 384

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYI ND LGIIANAHT FADKE  KA    C ELA LFSIA++FPKTGVPA
Sbjct: 385  IEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPA 444

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP HLHVKE+PDFMEK +KPTYES  VIGKLFREVKD+AP    I+SFT++VA  SYD+
Sbjct: 445  EIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDIRSFTRDVAMQSYDA 504

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFEDY+ +AFYYK +YDFKLG+LMD YGI+TESEILSGS+MK S+ FD+RKDA+A
Sbjct: 505  DMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCYGIRTESEILSGSLMKMSKSFDKRKDAEA 564

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEARTWF+ K G+   +  DD+YA ASAWYHVTYH  YWGCYN+G+  DHF
Sbjct: 565  IALAVRSLRKEARTWFN-KMGSGTYAGADDVYAIASAWYHVTYHPYYWGCYNEGMYHDHF 623

Query: 244  LSFPWCVYNKLINIKRDKNS 185
            LSFPWCVY+KLI IKRDK S
Sbjct: 624  LSFPWCVYDKLIQIKRDKMS 643


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  494 bits (1273), Expect = e-137
 Identities = 241/329 (73%), Positives = 275/329 (83%)
 Frame = -3

Query: 1144 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVSWDPELIPRRQVKPMDYTPAQSVLLDHDVT 965
            VDCVVFPQKG RPHP+ECSGSDLDGDIYFV WD +LIP RQ+ PMDYTPA + +LDHDV 
Sbjct: 615  VDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVM 674

Query: 964  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAESNACIELAMLFSIAVDFPKTGVPA 785
            IEEV+EYFTNYI ND LGIIANAHT FADKE  KA    C ELA LFSIA++FPKTGVPA
Sbjct: 675  IEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPA 734

Query: 784  EIPSHLHVKEFPDFMEKLDKPTYESHRVIGKLFREVKDIAPQASCIKSFTKEVARMSYDS 605
            EIP HLHVKE+PDFMEK +KPTYES  VIGKLFREVKD+AP    ++SFT++VA  SYD+
Sbjct: 735  EIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDVRSFTRDVAMQSYDA 794

Query: 604  DMEVDGFEDYIDEAFYYKGEYDFKLGNLMDYYGIKTESEILSGSIMKFSRLFDRRKDADA 425
            DMEVDGFEDY+ +AFYYK +YDFKLG+LMD  GI+TESEILSGSIMK S+ FD+RKDA+A
Sbjct: 795  DMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKMSKSFDKRKDAEA 854

Query: 424  IGAAVRALKKEARTWFDRKNGTELSSQGDDLYAKASAWYHVTYHEKYWGCYNDGLDRDHF 245
            I  AVR+L+KEARTWF+ K G+   +  DD+YA ASAWYHVTYH  YWGCYN+G+  DHF
Sbjct: 855  IALAVRSLRKEARTWFN-KMGSGTYAGADDVYAIASAWYHVTYHPYYWGCYNEGMYHDHF 913

Query: 244  LSFPWCVYNKLINIKRDKNSKKRSLNQSL 158
            LSFPWCVY+KLI IKRDK S  RSL+ SL
Sbjct: 914  LSFPWCVYDKLIQIKRDKMS-IRSLHLSL 941