BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00001066
         (1180 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   544   e-152
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              535   e-149
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   535   e-149
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   524   e-146
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       519   e-145
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]   514   e-143
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   513   e-143
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun...   509   e-142
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   504   e-140
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       500   e-139
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   499   e-138
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      498   e-138
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       498   e-138
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              497   e-138
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   497   e-138
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   496   e-138
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...   495   e-137
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]   495   e-137
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   494   e-137
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   494   e-137

>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  544 bits (1402), Expect = e-152
 Identities = 257/332 (77%), Positives = 286/332 (86%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIPP Q  PMDYTPAQS+ LDHDV 
Sbjct: 797  VDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQ 856

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IE+V+EYFTNYIVNDSLGIIANAHT FAD+EP KA S+ C++LA KFSIAVDFPKTGVPA
Sbjct: 857  IEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVPA 916

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP HL+VKEYPDFMEK DKPTYES  VIGKLFR VKDIAP TSCI  FTKEVA+RSYD 
Sbjct: 917  EIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDP 976

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFED+IDDA Y+KG YD KLGN+MDYYGI+TE+EIL GSIMKMSK+F +R+D EA
Sbjct: 977  DMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEA 1036

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV+AL+KEAR WF EK+ +++   EDD Y KASAWYHVTYHPDYWGCYN G+ RDH+
Sbjct: 1037 IGMAVRALRKEARAWFKEKSGSDT---EDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHF 1093

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNHSLESQF 183
            LSFPWCVYD+L+EIK+ K S  N   +LE QF
Sbjct: 1094 LSFPWCVYDRLVEIKKDKTSIGNAFPALEQQF 1125


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  535 bits (1377), Expect = e-149
 Identities = 258/339 (76%), Positives = 289/339 (85%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD +LIPP Q+ PMDYTPA + +LDHDV 
Sbjct: 581  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVM 640

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYIVNDSLGIIANAHT FADKE  KA  D C ELA  FSIAVDFPKTGVPA
Sbjct: 641  IEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPA 700

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP +L VKEYPDFMEK DKPTYES  VIGKLFREVKDIAP    I +FT++VA++SYD 
Sbjct: 701  EIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDP 760

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEV GFEDY+ DA+YYK EYD KLGN+MDYYGI+TESEIL GSIM+MSK+FDRRKD EA
Sbjct: 761  DMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEA 820

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AVK+L+KEARTWF+ K  +E+ S+ DDVY KASAWYHVTYHPDYWGCYNEG++RDH+
Sbjct: 821  IGLAVKSLRKEARTWFN-KMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHF 879

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLN-HSLESQFVRVLSL 165
            LSFPWCVYDKLI  K+KK S R+L+  SLE +  + L L
Sbjct: 880  LSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 918


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  535 bits (1377), Expect = e-149
 Identities = 258/339 (76%), Positives = 289/339 (85%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD +LIPP Q+ PMDYTPA + +LDHDV 
Sbjct: 783  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVM 842

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYIVNDSLGIIANAHT FADKE  KA  D C ELA  FSIAVDFPKTGVPA
Sbjct: 843  IEEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPA 902

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP +L VKEYPDFMEK DKPTYES  VIGKLFREVKDIAP    I +FT++VA++SYD 
Sbjct: 903  EIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDP 962

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEV GFEDY+ DA+YYK EYD KLGN+MDYYGI+TESEIL GSIM+MSK+FDRRKD EA
Sbjct: 963  DMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEA 1022

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AVK+L+KEARTWF+ K  +E+ S+ DDVY KASAWYHVTYHPDYWGCYNEG++RDH+
Sbjct: 1023 IGLAVKSLRKEARTWFN-KMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHF 1081

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLN-HSLESQFVRVLSL 165
            LSFPWCVYDKLI  K+KK S R+L+  SLE +  + L L
Sbjct: 1082 LSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 1120


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score =  524 bits (1350), Expect = e-146
 Identities = 253/343 (73%), Positives = 290/343 (84%), Gaps = 4/343 (1%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP  Q++PMDYTP   + LDHDVT
Sbjct: 793  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVT 852

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYIVNDSLG+IANAHTA ADKE LKA S+ C+ELA KFSIAVDFPKTGVPA
Sbjct: 853  IEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPA 912

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIPS+L  +EYPDFMEK DKP+YES  VIGKLFREVKDIAPRTS I +FT +VA++ YD 
Sbjct: 913  EIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDP 972

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFEDYIDDA+YYK  YD KLGN+M+YYGI+TE+E+L GS MKMSK+F +++D EA
Sbjct: 973  DMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEA 1032

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV++LKKEAR+WF+EK  +   SQ DDV  KASAWYHVTYH +YWGCYNEG+ RDH+
Sbjct: 1033 IGMAVRSLKKEARSWFNEK-GSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHF 1091

Query: 278  LSFPWCVYDKLIEIKQKKNSER----NLNHSLESQFVRVLSLS 162
            LSFPWCVYDKLI+IK ++NS R     +  S+E QF R L LS
Sbjct: 1092 LSFPWCVYDKLIQIK-RRNSARIRRSLILPSVERQFSRGLHLS 1133


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  519 bits (1337), Expect = e-145
 Identities = 252/340 (74%), Positives = 280/340 (82%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP  Q  PMDY+PA +  LDHDV 
Sbjct: 794  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVR 853

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEVQEYFTNYIVNDSLGIIANAHTAFADKEP KA S +CIELA  FSIAVDFPKTGVPA
Sbjct: 854  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPA 913

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
             IP  L+VKEYPDFMEKL+KPTYES  VIGKLFREVKDIAP    +  FTKEVA RSYD 
Sbjct: 914  VIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDP 973

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DME DGFEDYIDDA+YYK  YD KLGN++DYYGI++E+EI+GGSIM+MSK+F +R+D E+
Sbjct: 974  DMEYDGFEDYIDDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIMRMSKSFTKRRDAES 1033

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            I  AV+AL+KEARTWF+EK ++   S  DDVY KASAWY+VTYH  YWGCYNEG+ RDHY
Sbjct: 1034 INMAVRALRKEARTWFNEKGSS-LDSAADDVYAKASAWYYVTYHHSYWGCYNEGMNRDHY 1092

Query: 278  LSFPWCVYDKLIEIKQKKNSERN--LNHSLESQFVRVLSL 165
            LSFPWCVYDKL++IK+ K S R      SLE  F R L L
Sbjct: 1093 LSFPWCVYDKLVQIKRSKASVRRSLQMSSLERAFDRRLHL 1132


>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
          Length = 654

 Score =  514 bits (1323), Expect = e-143
 Identities = 251/339 (74%), Positives = 282/339 (83%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD +LIPP Q+ PMDYTPA +        
Sbjct: 325  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPT-------- 376

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
             +EV+EYFTNYIVNDSLGIIANAHT FADKE  KA  D C ELA  FSIAVDFPKTGVPA
Sbjct: 377  -KEVEEYFTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPA 435

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP +L VKEYPDFMEK DKPTYES  VIGKLFREVKDIAP    I +FT++VA++SYD 
Sbjct: 436  EIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDP 495

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEV GFEDY+ DA+YYK EYD KLGN+MDYYGI+TESEIL GSIM+MSK+FDRRKD EA
Sbjct: 496  DMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEA 555

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AVK+L+KEARTWF+ K  +E+ S+ DDVY KASAWYHVTYHPDYWGCYNEG++RDH+
Sbjct: 556  IGLAVKSLRKEARTWFN-KMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHF 614

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLN-HSLESQFVRVLSL 165
            LSFPWCVYDKLI  K+KK S R+L+  SLE +  + L L
Sbjct: 615  LSFPWCVYDKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 653


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  513 bits (1322), Expect = e-143
 Identities = 242/332 (72%), Positives = 279/332 (84%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFP+ GKRPHPNECSGSDLDGDIYFVCWD +LIP  QV PMDY PA +  LDHDVT
Sbjct: 779  VDCVVFPKNGKRPHPNECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVT 838

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV++YFTNYIVNDSLGIIANAHT FADKEPL A S+ C+ELA  FSIAVDF KTG+PA
Sbjct: 839  IEEVEDYFTNYIVNDSLGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIPA 898

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP HL VKEYPDFMEK DK  Y S RVIGKLFREVKDIAP+TS   +FTKEVA+RSYD 
Sbjct: 899  EIPPHLRVKEYPDFMEKPDKINYASSRVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDP 958

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFED+ID+A+ +K EYD KLGN+M+YYG++TE+E+L G IMKMSKTFDRRKD EA
Sbjct: 959  DMEVDGFEDHIDEAFLHKTEYDYKLGNLMEYYGVKTEAEVLSGGIMKMSKTFDRRKDAEA 1018

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IGAAV++L+ EAR+WF      + G++ DDVY KASAWY+VTYHPDY+GCYNEG++RDHY
Sbjct: 1019 IGAAVRSLRNEARSWF------KKGTEADDVYAKASAWYYVTYHPDYFGCYNEGMKRDHY 1072

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNHSLESQF 183
            LSFPWCVYDKL++IK+  +   +   SL  QF
Sbjct: 1073 LSFPWCVYDKLVKIKKDNSRRASQMASLRRQF 1104


>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
            gi|462422197|gb|EMJ26460.1| hypothetical protein
            PRUPE_ppa001524mg [Prunus persica]
          Length = 808

 Score =  509 bits (1311), Expect = e-142
 Identities = 241/341 (70%), Positives = 282/341 (82%), Gaps = 2/341 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP  Q+ PMDYTPA ++ LDH VT
Sbjct: 469  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDDELIPSRQIQPMDYTPAPTIALDHAVT 528

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYF NY+VNDSLGIIANAHTAFAD++P KA S  CIELA  FSIAVDFPKTGVPA
Sbjct: 529  IEEVEEYFVNYMVNDSLGIIANAHTAFADRQPSKAMSKPCIELAKLFSIAVDFPKTGVPA 588

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
             IP HL VKE+PDFMEK DKPTY+SC VIG+LFREVKD+ P    I +F++EVA++SYD 
Sbjct: 589  IIPQHLRVKEFPDFMEKPDKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDR 648

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFEDYI+DA+YYK  YD  LGN++DYYGI+TE+EIL GS+MKMSK+F +R+D++ 
Sbjct: 649  DMEVDGFEDYIEDAFYYKSNYDSILGNLLDYYGIKTEAEILSGSVMKMSKSFTKRRDIDP 708

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            I  AV++L+KEARTWF+EK  T   S  DDVY KASAWYHVTYHP Y+GCYNEGL RDH+
Sbjct: 709  INMAVRSLRKEARTWFNEK-ATGLDSGADDVYAKASAWYHVTYHPKYFGCYNEGLNRDHF 767

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNH--SLESQFVRVLSLS 162
            +SFPWCVYDKL+ IK++K S R   +  SLE +F   L L+
Sbjct: 768  ISFPWCVYDKLVHIKKEKASVRRARNLSSLERRFRNDLHLN 808


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  504 bits (1297), Expect = e-140
 Identities = 241/339 (71%), Positives = 277/339 (81%), Gaps = 1/339 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPELIP  Q+ PMDY+PA +  L+H+VT
Sbjct: 771  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVT 830

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYIVNDSLGIIANAHT FAD+EP KA S  C  LA  FSIAVDFPKTGVPA
Sbjct: 831  IEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPA 890

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP  L VKEYPDFMEK DKPTY+S  VIGKLFREVKD+AP    I + T+E  +R YD 
Sbjct: 891  EIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDP 950

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDG+EDY+DDA+Y+K  YD KLGN+M+YYGI+TE+EIL G IMKMS++F +++D EA
Sbjct: 951  DMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEA 1010

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV++L+KEAR+WF+EK N    S+ DD+Y KASAWYHVTYHP YWG YNEG+ R+H+
Sbjct: 1011 IGVAVRSLRKEARSWFNEKGN-GLDSEADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHF 1069

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLN-HSLESQFVRVLSL 165
            LSFPWCVYDKLI IK+K  S RN    SLES F R L L
Sbjct: 1070 LSFPWCVYDKLILIKKKVTSRRNSRLSSLESLFARGLRL 1108


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  500 bits (1288), Expect = e-139
 Identities = 242/338 (71%), Positives = 274/338 (81%), Gaps = 2/338 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDP+LIPP QV  MDYTPA +  LDHDVT
Sbjct: 782  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVT 841

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYI+NDSLGIIANAH  FAD+EP  A SD C +LA  FSIAVDFPKTGVPA
Sbjct: 842  IEEVEEYFTNYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPA 901

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIPS L  KEYPDFMEK DKPTY S +VIGKLF++VK+  P+ S I  FT++VA++SYD 
Sbjct: 902  EIPSQLRPKEYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDS 961

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DM VDGFEDYID+A+YYK EYD KLGN+MDYYGI+TE+EIL G IMK SKTFDRRKD EA
Sbjct: 962  DMIVDGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEA 1021

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV+ L+KEAR WF  +      S  DD+  KASAWYHVTYH  YWG YNEGL+RDH+
Sbjct: 1022 IGVAVRCLRKEARAWFKRR------SDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDHF 1075

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNH--SLESQFVRVL 171
            +SFPWCVYD+LI+IK+ K  +R + H  SL SQ  R L
Sbjct: 1076 ISFPWCVYDQLIQIKKAKARKRPVPHLSSLGSQLSRKL 1113


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  499 bits (1284), Expect = e-138
 Identities = 241/340 (70%), Positives = 276/340 (81%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDP+L+PP Q  PMDYTPA S  LDHDVT
Sbjct: 783  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVT 842

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYIVNDSLGIIANAH  FAD+EP  A SD C +LA  FSIAVDFPKTGVPA
Sbjct: 843  IEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPA 902

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIPS L  KEYPDFMEK DKPTY S +VIGKLF++VKD  P+ S I  FT +VA++SYD 
Sbjct: 903  EIPSQLRPKEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDG 962

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DM V+GFEDYID+A+YYK EYD KLGN+MDYYGI+TE+EIL G IMK SKTFDRRKD +A
Sbjct: 963  DMIVNGFEDYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDADA 1022

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV++L+KEARTWF  +      S  DD+  KASAWYHVTYH  YWG YNEGL+RDH+
Sbjct: 1023 IGVAVRSLRKEARTWFKRR------SDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRDHF 1076

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNH--SLESQFVRVLSL 165
            +SFPWC+YD+LI+IK+ K  ++ + H  SL +Q  R L L
Sbjct: 1077 ISFPWCIYDQLIQIKKAKARKKPVLHLSSLGNQLSRKLVL 1116


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  498 bits (1282), Expect = e-138
 Identities = 236/340 (69%), Positives = 280/340 (82%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGD+YFVCWDPELIP  Q+ PMDY+PA +  LDH+VT
Sbjct: 771  VDCVVFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVT 830

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEE++EYFTNYIVNDSLGII+NAHTAFAD+EP KA S  C+ELA  FSIAVDFPKTGVPA
Sbjct: 831  IEEIEEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPA 890

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP  L VKEYPDFMEK DKP+Y+S  VIGKLFREVK++AP    I   T+E  QR YD 
Sbjct: 891  EIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDP 950

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEV+GFEDYIDDA+++K +YD KLGN+MDYYG++TE+EILGG IMKMS++F +++D EA
Sbjct: 951  DMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEA 1010

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            I  AV++L+KEAR+WF+EK  +E   + DD Y KASAWY+VTYHP YWG YNEG+ RDH+
Sbjct: 1011 ISMAVRSLRKEARSWFNEK-GSELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHF 1069

Query: 278  LSFPWCVYDKLIEIKQKKNSERNL--NHSLESQFVRVLSL 165
            LSFPWCVYDKLI+IK++K + R      SLE +F R L L
Sbjct: 1070 LSFPWCVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHL 1109


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  498 bits (1281), Expect = e-138
 Identities = 233/309 (75%), Positives = 259/309 (83%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDP+LIPP QV PMDYTPA S+ LDHDVT
Sbjct: 473  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVT 532

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNY+VND LG+IANAH  FAD+EP  A SD CIELA  FSIAVDFPKTGVPA
Sbjct: 533  IEEVEEYFTNYMVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPA 592

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIPS L  KEYPDFMEK DK TY S +VIGKLFREVKD   + S IT FT++VA+RSYD 
Sbjct: 593  EIPSQLRPKEYPDFMEKPDKTTYHSEKVIGKLFREVKDKTTQASSITTFTRDVARRSYDT 652

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            D+EVDGFEDYID+A+ YK EYD KLGN+MDYYGI+TE+E L G IMK SKTFDRR+D EA
Sbjct: 653  DLEVDGFEDYIDEAFDYKSEYDKKLGNLMDYYGIKTEAETLSGGIMKASKTFDRRRDAEA 712

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV++L+KEARTWF  +      S  DD+  KASAWYHV YHP YWGCYNEGL+RDH+
Sbjct: 713  IGVAVRSLRKEARTWFKRR------SDIDDLLAKASAWYHVAYHPTYWGCYNEGLKRDHF 766

Query: 278  LSFPWCVYD 252
            +SFPWCVYD
Sbjct: 767  ISFPWCVYD 775


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  497 bits (1280), Expect = e-138
 Identities = 238/329 (72%), Positives = 274/329 (83%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHP+ECSGSDLDGDIYFVCWD +LIPP Q+ PMDYTPA + +LDHDV 
Sbjct: 615  VDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVM 674

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYI ND LGIIANAHT FADKE  KA    C ELA  FSIA++FPKTGVPA
Sbjct: 675  IEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPA 734

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP HLHVKEYPDFMEK +KPTYES  VIGKLFREVKD+AP    + +FT++VA +SYD 
Sbjct: 735  EIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDVRSFTRDVAMQSYDA 794

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFEDY+ DA+YYK +YD KLG++MD  GI TESEIL GSIMKMSK+FD+RKD EA
Sbjct: 795  DMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKMSKSFDKRKDAEA 854

Query: 458  IGAAVKALKKEARTWFDEK-NNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDH 282
            I  AV++L+KEARTWF++  + T +G+  DDVY  ASAWYHVTYHP YWGCYNEG+  DH
Sbjct: 855  IALAVRSLRKEARTWFNKMGSGTYAGA--DDVYAIASAWYHVTYHPYYWGCYNEGMYHDH 912

Query: 281  YLSFPWCVYDKLIEIKQKKNSERNLNHSL 195
            +LSFPWCVYDKLI+IK+ K S R+L+ SL
Sbjct: 913  FLSFPWCVYDKLIQIKRDKMSIRSLHLSL 941


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  497 bits (1280), Expect = e-138
 Identities = 238/329 (72%), Positives = 274/329 (83%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHP+ECSGSDLDGDIYFVCWD +LIPP Q+ PMDYTPA + +LDHDV 
Sbjct: 781  VDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVM 840

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYI ND LGIIANAHT FADKE  KA    C ELA  FSIA++FPKTGVPA
Sbjct: 841  IEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPA 900

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP HLHVKEYPDFMEK +KPTYES  VIGKLFREVKD+AP    + +FT++VA +SYD 
Sbjct: 901  EIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDVRSFTRDVAMQSYDA 960

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFEDY+ DA+YYK +YD KLG++MD  GI TESEIL GSIMKMSK+FD+RKD EA
Sbjct: 961  DMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKMSKSFDKRKDAEA 1020

Query: 458  IGAAVKALKKEARTWFDEK-NNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDH 282
            I  AV++L+KEARTWF++  + T +G+  DDVY  ASAWYHVTYHP YWGCYNEG+  DH
Sbjct: 1021 IALAVRSLRKEARTWFNKMGSGTYAGA--DDVYAIASAWYHVTYHPYYWGCYNEGMYHDH 1078

Query: 281  YLSFPWCVYDKLIEIKQKKNSERNLNHSL 195
            +LSFPWCVYDKLI+IK+ K S R+L+ SL
Sbjct: 1079 FLSFPWCVYDKLIQIKRDKMSIRSLHLSL 1107


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  496 bits (1277), Expect = e-138
 Identities = 236/322 (73%), Positives = 267/322 (82%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWD ++IPP QV PM+Y PA S+ LDHDVT
Sbjct: 780  VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVT 839

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYIVNDSLGIIANAH  FAD+EP  A SD C +LA  FSIAVDFPKTGVPA
Sbjct: 840  IEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPA 899

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIPS L  KEYPDFM+K DK +Y S RVIGKLFR+VKD AP+ S I  FT++VA+RSYD 
Sbjct: 900  EIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDA 959

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFEDYID+A+ YK EYD KLGN+MDYYGI+TE+EIL G IMK SKTFDRRKD EA
Sbjct: 960  DMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEA 1019

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            I  AV+AL+KEAR WF  +N+       DD+  KASAWYHVTYHP YWGCYN+GL+R H+
Sbjct: 1020 ISVAVRALRKEARAWFKRRNDI------DDMLPKASAWYHVTYHPTYWGCYNQGLKRAHF 1073

Query: 278  LSFPWCVYDKLIEIKQKKNSER 213
            +SFPWCVYD+LI+IK+ K   R
Sbjct: 1074 ISFPWCVYDQLIQIKKDKARNR 1095


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
            gi|557094740|gb|ESQ35322.1| hypothetical protein
            EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score =  495 bits (1275), Expect = e-137
 Identities = 234/329 (71%), Positives = 269/329 (81%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCV+FPQKG RPHPNECSGSDLDGDIYFVCWDPELIPP    PMDYTP  + +LDHDVT
Sbjct: 775  VDCVIFPQKGLRPHPNECSGSDLDGDIYFVCWDPELIPPETSEPMDYTPEPAQILDHDVT 834

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEE++EYFTNYIVNDSLGIIANAHTAFADKEPLKA SD CIELA KFSIAVDFPKTGV A
Sbjct: 835  IEEIEEYFTNYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELARKFSIAVDFPKTGVAA 894

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP HL+VKEYPDFMEK DKPTYES  VIGKLFREVK+ AP    I +FT +VA ++YD 
Sbjct: 895  EIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVASKTYDQ 954

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEV GFE+YID+A+Y+KG YD KLGN+MDYYGI+TE+E+L G IM+MSK+F +R+D E+
Sbjct: 955  DMEVYGFEEYIDEAFYHKGNYDYKLGNLMDYYGIKTEAEVLSGGIMRMSKSFTKRRDGES 1014

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            IG AV++L+KEA +WF    N     ++ DV  KASAWYHVTYHP YWG YNEGL RDH+
Sbjct: 1015 IGRAVRSLRKEALSWF----NAAEKEEDFDVSAKASAWYHVTYHPSYWGVYNEGLNRDHF 1070

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNHSLE 192
            LSF WCVYDKL+ IK+     R    +L+
Sbjct: 1071 LSFAWCVYDKLVRIKKANVGRRQRQVTLD 1099


>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
          Length = 697

 Score =  495 bits (1275), Expect = e-137
 Identities = 235/321 (73%), Positives = 269/321 (83%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHP+ECSGSDLDGDIYFVCWD +LIPP Q+ PMDYTPA + +LDHDV 
Sbjct: 325  VDCVVFPQKGMRPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVM 384

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYFTNYI ND LGIIANAHT FADKE  KA    C ELA  FSIA++FPKTGVPA
Sbjct: 385  IEEVEEYFTNYIGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPA 444

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
            EIP HLHVKEYPDFMEK +KPTYES  VIGKLFREVKD+AP    I +FT++VA +SYD 
Sbjct: 445  EIPFHLHVKEYPDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDIRSFTRDVAMQSYDA 504

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEVDGFEDY+ DA+YYK +YD KLG++MD YGI TESEIL GS+MKMSK+FD+RKD EA
Sbjct: 505  DMEVDGFEDYVRDAFYYKSQYDFKLGSLMDCYGIRTESEILSGSLMKMSKSFDKRKDAEA 564

Query: 458  IGAAVKALKKEARTWFDEK-NNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDH 282
            I  AV++L+KEARTWF++  + T +G+  DDVY  ASAWYHVTYHP YWGCYNEG+  DH
Sbjct: 565  IALAVRSLRKEARTWFNKMGSGTYAGA--DDVYAIASAWYHVTYHPYYWGCYNEGMYHDH 622

Query: 281  YLSFPWCVYDKLIEIKQKKNS 219
            +LSFPWCVYDKLI+IK+ K S
Sbjct: 623  FLSFPWCVYDKLIQIKRDKMS 643


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max]
          Length = 1125

 Score =  494 bits (1272), Expect = e-137
 Identities = 236/332 (71%), Positives = 270/332 (81%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP   + PMDYT   +V LDHDV 
Sbjct: 790  VDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDHELIPSRPIDPMDYTAPATVELDHDVM 849

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
            IEEV+EYF NYIVNDSLGIIANAHT FADKE LKA SD C++LA  FS AVDFPKTGVPA
Sbjct: 850  IEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMSDQCVKLARLFSTAVDFPKTGVPA 909

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
             IP  LHVKEYPDFMEK DKPTY+S  VIGKLFREVK+I+     IT+FTK VA+ SYD 
Sbjct: 910  VIPPELHVKEYPDFMEKPDKPTYKSHNVIGKLFREVKEISTSAGSITSFTKLVARDSYDH 969

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            +MEVDGF DY+DDA+Y+K  YD KLGN+MDYYGI+TE+EILGG+IMKMSK+F++R+D EA
Sbjct: 970  EMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILGGNIMKMSKSFNKRRDAEA 1029

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            I  AV++L+KEAR WF+E ++ +  S   DVY KASAWYHVTYHP YWGCYNEG+ RDHY
Sbjct: 1030 INMAVRSLRKEARAWFNENSSGDVDSGSSDVYAKASAWYHVTYHPSYWGCYNEGMNRDHY 1089

Query: 278  LSFPWCVYDKLIEIKQKKNSERNLNHSLESQF 183
            LSF WCVY  L++IK++K S R    SLE  F
Sbjct: 1090 LSFSWCVYPLLVQIKKEKLSIR--RSSLEYSF 1119


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
            1a [Cucumis sativus]
          Length = 1130

 Score =  494 bits (1272), Expect = e-137
 Identities = 232/340 (68%), Positives = 279/340 (82%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1178 VDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPPHQVTPMDYTPAQSVLLDHDVT 999
            VDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP  Q+ PMDYTPA    LD DVT
Sbjct: 790  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDVT 849

Query: 998  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPLKAASDACIELAMKFSIAVDFPKTGVPA 819
             E++QEYF NY+VNDSLGIIANAHTAFADKE  KA S  C+ELA  FS+AVDFPKTGVPA
Sbjct: 850  TEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVAVDFPKTGVPA 909

Query: 818  EIPSHLHVKEYPDFMEKLDKPTYESCRVIGKLFREVKDIAPRTSCITAFTKEVAQRSYDL 639
             IPSHL+VKE+PDFMEK D+P+YES +VIGKLFR VKDIAP  S I +FT++VA+R YD 
Sbjct: 910  IIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDC 969

Query: 638  DMEVDGFEDYIDDAYYYKGEYDLKLGNMMDYYGIETESEILGGSIMKMSKTFDRRKDVEA 459
            DMEV+GFEDY++DA+Y+K  YD KLGN++DYYGI++E+E+L GSIM+MSK+F RR+D EA
Sbjct: 970  DMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEA 1029

Query: 458  IGAAVKALKKEARTWFDEKNNTESGSQEDDVYKKASAWYHVTYHPDYWGCYNEGLERDHY 279
            I  AV++L+KEARTWF+ +   +S S  DD++ KASAWY+VTYH  YWGCYNEG++RDHY
Sbjct: 1030 INLAVRSLRKEARTWFNAREGADSNS--DDLFAKASAWYYVTYHHSYWGCYNEGMKRDHY 1087

Query: 278  LSFPWCVYDKLIEIKQK--KNSERNLNHSLESQFVRVLSL 165
            LSFPWCVYDKL++IK+   +  ER    +   +F  VL+L
Sbjct: 1088 LSFPWCVYDKLMQIKENNLRRRERAARLASFDRFGHVLNL 1127