BLASTX nr result
ID: Akebia24_contig00000424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00000424
(341 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK95667.1| unknown [Populus trichocarpa] gi|118488853|gb|ABK... 62 6e-08
ref|XP_007212274.1| hypothetical protein PRUPE_ppa013712mg [Prun... 62 1e-07
gb|AFK47048.1| unknown [Lotus japonicus] 61 1e-07
sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protei... 61 2e-07
gb|AFK48333.1| unknown [Medicago truncatula] 60 2e-07
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ... 60 3e-07
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin... 60 4e-07
gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protei... 58 2e-06
gb|EYU31374.1| hypothetical protein MIMGU_mgv1a015615mg [Mimulus... 57 2e-06
ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chl... 57 2e-06
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc... 57 2e-06
gb|EYU46251.1| hypothetical protein MIMGU_mgv1a016929mg [Mimulus... 57 3e-06
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl... 57 3e-06
ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chl... 57 3e-06
ref|XP_007131390.1| hypothetical protein PHAVU_011G009700g [Phas... 56 5e-06
ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citr... 56 5e-06
ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Popu... 56 5e-06
ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago trunc... 56 5e-06
ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]... 56 6e-06
ref|XP_006349807.1| PREDICTED: photosystem II 5 kDa protein, chl... 56 6e-06
>gb|ABK95667.1| unknown [Populus trichocarpa] gi|118488853|gb|ABK96236.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118488867|gb|ABK96243.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489821|gb|ABK96710.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118489889|gb|ABK96742.1| unknown [Populus trichocarpa
x Populus deltoides]
Length = 105
Score = 62.4 bits (150), Expect = 6e-08
Identities = 46/108 (42%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXX-------------------D 158
MAS TM SFL G T++ + LI+AKAS D
Sbjct: 1 MASMTMTASFLAGSTMAKQPLTTPRRG----LIVAKASRTTEGVNVEMKNKEESSSGRRD 56
Query: 157 LMFXXXXXXXXXXXXXXXADE-PKRGSPEAKKKYAQICVTMPTARICR 17
LMF ADE P+RG+PEAKKKYA ICVTMPTARICR
Sbjct: 57 LMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICR 104
>ref|XP_007212274.1| hypothetical protein PRUPE_ppa013712mg [Prunus persica]
gi|462408139|gb|EMJ13473.1| hypothetical protein
PRUPE_ppa013712mg [Prunus persica]
Length = 107
Score = 61.6 bits (148), Expect = 1e-07
Identities = 45/110 (40%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXX-------------------- 161
MAS TMA SFL G + LI+AKAS
Sbjct: 1 MASMTMAASFLTG----SASTITKPSTARRSLIVAKASSAPEGEKGSLEMKKSSSSSSSG 56
Query: 160 --DLMFXXXXXXXXXXXXXXXADEPKRGSPEAKKKYAQICVTMPTARICR 17
DLMF ADEPKRGS EAK+KYA +CVTMPTARICR
Sbjct: 57 RRDLMFAAAAAAACSIAKAAMADEPKRGSKEAKEKYAPVCVTMPTARICR 106
>gb|AFK47048.1| unknown [Lotus japonicus]
Length = 107
Score = 61.2 bits (147), Expect = 1e-07
Identities = 39/102 (38%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXXD--------------LMFXX 143
MAS TM S LG ++ R+ +A D LMF
Sbjct: 1 MASFTMTASILGSPVLTSRSAVATQRRFVVNAAATRAVEGDNKVNEEGSNNGRRNLMFVS 60
Query: 142 XXXXXXXXXXXXXADEPKRGSPEAKKKYAQICVTMPTARICR 17
ADEPK GSPEAKKKYA +CVTMPTAR+CR
Sbjct: 61 AAAAVCSVAGIALADEPKNGSPEAKKKYAPVCVTMPTARVCR 102
>sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protein, chloroplastic; Flags:
Precursor
Length = 106
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVS----------GRAXXXXXXXXXXRLIIAK------ASXXDLMF 149
MAS TM +SFLGG TV+ G ++I+K + +L F
Sbjct: 1 MASITMMSSFLGGSTVAPAKVPSANRRGVVMVKAMHEGENNVVISKNEESKNSGRRELFF 60
Query: 148 XXXXXXXXXXXXXXXAD-EPKRGSPEAKKKYAQICVTMPTARICRY 14
AD EPKRG+PEAKKKY+ +CVT PTARICRY
Sbjct: 61 AMAAAAACSVAKTAMADEEPKRGTPEAKKKYSSVCVTNPTARICRY 106
>gb|AFK48333.1| unknown [Medicago truncatula]
Length = 108
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICRY 14
DEPKRGSPEAKK YA +CVTMPTARICRY
Sbjct: 80 DEPKRGSPEAKKAYAPVCVTMPTARICRY 108
>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
protein [Populus trichocarpa]
Length = 105
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/108 (41%), Positives = 51/108 (47%), Gaps = 20/108 (18%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXX-------------------D 158
MAS TM SFL G ++ + LI+AKAS D
Sbjct: 1 MASITMTASFLTGSAMAKQPSTTPRRG----LIVAKASRATEGVNVEMKNREESSGGRRD 56
Query: 157 LMFXXXXXXXXXXXXXXXADE-PKRGSPEAKKKYAQICVTMPTARICR 17
LMF ADE P+RG+PEAKKKYA ICVTMPTARICR
Sbjct: 57 LMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICR 104
>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 59.7 bits (143), Expect = 4e-07
Identities = 43/104 (41%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKA----------------SXXDLMF 149
MAS TM S LG TV+ R+ + AKA +LMF
Sbjct: 1 MASFTMTASILGSPTVTNRSAVATQRRSLV-VNAAKAVEAEKVSYDNDMDGSNGRRNLMF 59
Query: 148 XXXXXXXXXXXXXXXADEPKRGSPEAKKKYAQICVTMPTARICR 17
ADEPK G+PEAKKKYA ICVTMPTARICR
Sbjct: 60 AAAAAAVCSVAGMAVADEPKPGTPEAKKKYAPICVTMPTARICR 103
>gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
kurrooa]
Length = 102
Score = 57.8 bits (138), Expect = 2e-06
Identities = 41/103 (39%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Frame = -2
Query: 280 MASTTMATSFL--------------GGVTVSGRAXXXXXXXXXXRLIIAKASXXDLMFXX 143
MAS TM TSF GGV + RA + + DLMF
Sbjct: 1 MASVTMTTSFFCRSAAAKQLPTTGRGGVAMV-RASKESEKLTVNVKEESNNTRRDLMFAM 59
Query: 142 XXXXXXXXXXXXXADEPKRGSPEAKKKYAQICVTMPTARICRY 14
ADEPKRG+ EAKKKYA +CVT PTARIC+Y
Sbjct: 60 AAVVASSIANFAMADEPKRGTVEAKKKYAAVCVTNPTARICKY 102
>gb|EYU31374.1| hypothetical protein MIMGU_mgv1a015615mg [Mimulus guttatus]
Length = 151
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICR 17
DEPKRGS EAKKKYA ICVTMPTARICR
Sbjct: 123 DEPKRGSAEAKKKYAPICVTMPTARICR 150
>ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Cicer
arietinum]
Length = 105
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICRY 14
DEPKRG+PEAKKKYA +CVT PTA+ICRY
Sbjct: 77 DEPKRGTPEAKKKYAVVCVTNPTAKICRY 105
>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
[Medicago truncatula]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICR 17
+EPKRG+PEAKKKYA +CVTMPTARICR
Sbjct: 78 EEPKRGTPEAKKKYAPVCVTMPTARICR 105
>gb|EYU46251.1| hypothetical protein MIMGU_mgv1a016929mg [Mimulus guttatus]
Length = 101
Score = 57.0 bits (136), Expect = 3e-06
Identities = 41/106 (38%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXX----------------DLMF 149
MAS TM SFLGG + +++ +AS DLMF
Sbjct: 1 MASMTMMASFLGGSAAAAATTTTRRH-----MVVVRASKDSSGEEESSSSNNNSRRDLMF 55
Query: 148 XXXXXXXXXXXXXXXADE-PKRGSPEAKKKYAQICVTMPTARICRY 14
ADE PKRGS +AKKKYA +CVT PTARICRY
Sbjct: 56 AVAAAAACSVAKIAMADEEPKRGSLDAKKKYAAVCVTNPTARICRY 101
>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 104
Score = 56.6 bits (135), Expect = 3e-06
Identities = 41/110 (37%), Positives = 46/110 (41%), Gaps = 22/110 (20%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXX-------------------- 161
MAS TM SFL LI+AKAS
Sbjct: 1 MASMTMTASFLASTITKPSTPRRS-------LIVAKASRAPEAEKVTVELKQSKEESSSG 53
Query: 160 --DLMFXXXXXXXXXXXXXXXADEPKRGSPEAKKKYAQICVTMPTARICR 17
DL+F ADEP+RG+P AKKKYA +CVTMPTARICR
Sbjct: 54 RRDLIFAAAAAAACSIAKVAMADEPERGTPAAKKKYAPVCVTMPTARICR 103
>ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 106
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICR 17
DEP RGSPEAK+KYA ICVTMPTARICR
Sbjct: 78 DEPARGSPEAKQKYAPICVTMPTARICR 105
>ref|XP_007131390.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
gi|561004390|gb|ESW03384.1| hypothetical protein
PHAVU_011G009700g [Phaseolus vulgaris]
Length = 106
Score = 56.2 bits (134), Expect = 5e-06
Identities = 40/108 (37%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Frame = -2
Query: 280 MASTTMATSFLGGVTVSGRAXXXXXXXXXXRLIIAKASXX-------------------- 161
MAS TMA S +G +S R+ L++A AS
Sbjct: 1 MASITMAASLIGSSVISHRSPVASPRR----LVVANASKAVEGEKTKFSSENDKEGNNGR 56
Query: 160 -DLMFXXXXXXXXXXXXXXXADEPKRGSPEAKKKYAQICVTMPTARIC 20
++MF ADEPKRG+PEAKK Y ICVTMPTARIC
Sbjct: 57 RNMMFAAAAAAVCSVAGMSMADEPKRGTPEAKKIYYPICVTMPTARIC 104
>ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citrus clementina]
gi|568832832|ref|XP_006470630.1| PREDICTED: photosystem
II 5 kDa protein, chloroplastic-like [Citrus sinensis]
gi|557548748|gb|ESR59377.1| hypothetical protein
CICLE_v10017247mg [Citrus clementina]
Length = 111
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICR 17
+EPKRG+P+AKKKYA +CVTMPTARICR
Sbjct: 83 EEPKRGTPDAKKKYAPVCVTMPTARICR 110
>ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Populus trichocarpa]
gi|550348232|gb|ERP66154.1| hypothetical protein
POPTR_0001s26410g [Populus trichocarpa]
Length = 110
Score = 56.2 bits (134), Expect = 5e-06
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICR 17
+EP+RG+PEAKKKYA ICVTMPTARICR
Sbjct: 34 EEPERGTPEAKKKYAPICVTMPTARICR 61
>ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488306|gb|AES69509.1| Photosystem II 5 kDa protein
[Medicago truncatula] gi|388501032|gb|AFK38582.1|
unknown [Medicago truncatula]
Length = 105
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICRY 14
DEP+RG+PEAKKKY +CVT PTARICRY
Sbjct: 77 DEPRRGTPEAKKKYGPVCVTNPTARICRY 105
>ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]
gi|21542450|sp|Q39195.2|PST2_ARATH RecName:
Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Nuclear encoded psbT;
AltName: Full=PsbTn; Flags: Precursor
gi|11692868|gb|AAG40037.1|AF324686_1 MSA6 [Arabidopsis
thaliana] gi|11908024|gb|AAG41441.1|AF326859_1 unknown
protein [Arabidopsis thaliana]
gi|12642844|gb|AAK00364.1|AF339682_1 unknown protein
[Arabidopsis thaliana] gi|11994265|dbj|BAB01448.1|
photosystem II 5 kD protein precursor [Arabidopsis
thaliana] gi|17065058|gb|AAL32683.1| photosystem II 5 kD
protein precursor [Arabidopsis thaliana]
gi|20260032|gb|AAM13363.1| photosystem II 5 kD protein
precursor [Arabidopsis thaliana]
gi|21593345|gb|AAM65294.1| photosystem II [Arabidopsis
thaliana] gi|332642933|gb|AEE76454.1| photosystem II
subunit T [Arabidopsis thaliana]
Length = 103
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICRY 14
+EPKRG+ AKKKYAQ+CVTMPTA+ICRY
Sbjct: 75 EEPKRGTEAAKKKYAQVCVTMPTAKICRY 103
>ref|XP_006349807.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Solanum tuberosum]
Length = 112
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -2
Query: 100 DEPKRGSPEAKKKYAQICVTMPTARICR 17
DEPKRGSPEAKKKY Q+CV+ PTARICR
Sbjct: 82 DEPKRGSPEAKKKYFQVCVSNPTARICR 109