BLASTX nr result
ID: Akebia24_contig00000363
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00000363 (1884 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 328 7e-87 ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 317 9e-84 ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 315 6e-83 ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 314 8e-83 ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 308 7e-81 gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 305 5e-80 sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 304 1e-79 ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun... 303 1e-79 ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp... 302 4e-79 ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 301 5e-79 ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 300 1e-78 ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] g... 300 2e-78 gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indi... 300 2e-78 ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 299 3e-78 ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 299 3e-78 gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativ... 298 7e-78 sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c... 296 2e-77 ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 296 2e-77 sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 296 2e-77 ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 296 3e-77 >ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|568855826|ref|XP_006481497.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Citrus sinensis] gi|557530828|gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 282 Score = 328 bits (840), Expect = 7e-87 Identities = 166/221 (75%), Positives = 192/221 (86%), Gaps = 1/221 (0%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSS+FDQEE++ S D +NFSPDLK+FVGNLPFSVDSA+LAGLFE AG VEMVEVI Sbjct: 67 RNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVI 126 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK+TGRSRGFGFVTMS+VEEVEAA +QFN YE++GRPLRVNSGPPPP+++ F R PRG Sbjct: 127 YDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRG 186 Query: 1218 GGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFG 1039 GG+ +P+ NRVYVGNLSWGVDDLALETLF EQG V EA+VVYDR++GRSRGFG Sbjct: 187 GGA-GAPS----SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFG 241 Query: 1038 FVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKP-RRQF 919 FVT+SSAEEV++AI +L+GVDL GR IRVSVAEA+P RRQF Sbjct: 242 FVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 282 >ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda] gi|548849631|gb|ERN08390.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda] Length = 272 Score = 317 bits (813), Expect = 9e-84 Identities = 163/220 (74%), Positives = 185/220 (84%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 R+V V S+F QEE+ + ++ANFS DLK+FVGNLPFSVDSA LA LFE+AG VEMVEVI Sbjct: 58 RSVAVFSEFQQEEDEAPS-EEANFSADLKLFVGNLPFSVDSARLAELFEQAGNVEMVEVI 116 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK TGRSRGFGFVTMSTVEEVEAAV+QFN ++ +GR LRVNSGPPP + + +PRG Sbjct: 117 YDKQTGRSRGFGFVTMSTVEEVEAAVQQFNGHDFEGRQLRVNSGPPPARDEM----SPRG 172 Query: 1218 GGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFG 1039 FDSP RSFDS NRVYVGNLSWGVDDLALE LFSEQG V EA+VVYDR++GRSRGFG Sbjct: 173 SRGFDSPRPRSFDSPNRVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFG 232 Query: 1038 FVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 FVT+S+AEEV SAISTL+G DL GRPIRV+ AEAKPRRQF Sbjct: 233 FVTYSTAEEVTSAISTLNGADLDGRPIRVTPAEAKPRRQF 272 >ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis vinifera] Length = 288 Score = 315 bits (806), Expect = 6e-83 Identities = 157/226 (69%), Positives = 188/226 (83%), Gaps = 6/226 (2%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSSD++Q+E+V S + +FSPDLK+FVGNLPF+VDSA LAGLFE+AG VEMVEVI Sbjct: 63 RNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVI 122 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK+TGRSRGFGFVTMSTVEEVEAA +QFN YE++GR LRVNSGPPP ++++ R Sbjct: 123 YDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENS 182 Query: 1218 GGSFDSPNRR------SFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNG 1057 ++ N R + +S+NR+YVGNLSWGVDDLALETLFSEQG VTEARV+YDR+ G Sbjct: 183 NFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETG 242 Query: 1056 RSRGFGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 RSRGFGFVT++SAEEVN AI +LDGVDL GR IRV++AEA+PRRQF Sbjct: 243 RSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288 >ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 273 Score = 314 bits (805), Expect = 8e-83 Identities = 161/235 (68%), Positives = 188/235 (80%) Frame = -1 Query: 1623 LPFSFTQNPNQTHXXRNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELA 1444 L F Q P + +NV +SS+F QEE+ S D+ +FS DLK+FVGNLPF+VDSA LA Sbjct: 48 LSFQHQQQPLSSRFLKNVAISSEFGQEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLA 107 Query: 1443 GLFERAGTVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGP 1264 GLFE AG VEMVEVIYDK+TGRSRGFGFVTM+T+EEVEAA +QFN YE+DGR LRVN GP Sbjct: 108 GLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGP 167 Query: 1263 PPPKQDSFGSRAPRGGGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEA 1084 PP K+ SF SR PRGG +FDS NRVYVGNLSW VD+LALETLF E+G V +A Sbjct: 168 PPQKESSF-SRGPRGG--------ETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDA 218 Query: 1083 RVVYDRDNGRSRGFGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 +VVYDRD+GRSRGFGFVT+SSAEEV++AI +L+G +L GR IRVSVAEAKPRRQF Sbjct: 219 KVVYDRDSGRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAKPRRQF 273 >ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|557530825|gb|ESR42008.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 271 Score = 308 bits (788), Expect = 7e-81 Identities = 160/221 (72%), Positives = 182/221 (82%), Gaps = 1/221 (0%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSS+FDQEE++ S D +NFSPDLK+FVGNLPFSVDSA+LAGLFE AG VEMVEVI Sbjct: 67 RNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVI 126 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK+TGRSRGFGFVTMS+VEEVEAA +QFN YE++GRPLRVNSGPPPP+++ F R PRG Sbjct: 127 YDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRG 186 Query: 1218 GGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFG 1039 GG+ +P+ NRVYVGNLSWGVDDLALETLF EQG V EA+VVYDR++GRSRGFG Sbjct: 187 GGA-GAPS----SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFG 241 Query: 1038 FVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKP-RRQF 919 FVT+SSAEE DL GR IRVSVAEA+P RRQF Sbjct: 242 FVTYSSAEE-----------DLAGRAIRVSVAEARPQRRQF 271 >gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] Length = 296 Score = 305 bits (781), Expect = 5e-80 Identities = 153/221 (69%), Positives = 183/221 (82%), Gaps = 3/221 (1%) Frame = -1 Query: 1572 VVVSSDFDQEEEV-SSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIY 1396 V VSS+FDQ+E+V S G ++ FSPDLK+FVGNLPFSVDSA+LAGLFER G VEMVEVIY Sbjct: 76 VAVSSEFDQDEDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIY 135 Query: 1395 DKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPR-- 1222 DK TGRSRGFGFVTMS+++EVEAA +QFN YE++GRPLRVN GPPP ++D R R Sbjct: 136 DKTTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGG 195 Query: 1221 GGGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGF 1042 GGG +++ NRVYVGNLSWGVD+ ALE+LFSEQG V EA+VVYDRD+GRSRGF Sbjct: 196 GGGGGGGGGGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGF 255 Query: 1041 GFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 GFVT+++A+EVNSAI++L+GVDL GR IRV+ AEAKPRR F Sbjct: 256 GFVTYNTADEVNSAINSLNGVDLNGRSIRVTHAEAKPRRSF 296 >sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName: Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris] Length = 273 Score = 304 bits (778), Expect = 1e-79 Identities = 164/223 (73%), Positives = 180/223 (80%), Gaps = 6/223 (2%) Frame = -1 Query: 1569 VVSSDFDQEEEVSSGRD----QANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEV 1402 V SDFDQ E+V G D + NFSPDLKIFVGNLPFS DSA LA LFERAG VEMVEV Sbjct: 59 VTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEV 118 Query: 1401 IYDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSR-AP 1225 IYDKLTGRSRGFGFVTMS+ EEVEAA +QFN YE+DGR LRVNSGPPP K+++ R Sbjct: 119 IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGS 178 Query: 1224 RGGGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRG 1045 RGGG SFDSSNRVYVGNL+WGVD ALETLFSEQG V +A+VVYDRD+GRSRG Sbjct: 179 RGGG--------SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRG 230 Query: 1044 FGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAK-PRRQF 919 FGFVT+SSAEEVN+AI +LDGVDL GR IRVS AEA+ PRRQF Sbjct: 231 FGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273 >ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] gi|462401286|gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica] Length = 298 Score = 303 bits (777), Expect = 1e-79 Identities = 155/221 (70%), Positives = 181/221 (81%), Gaps = 1/221 (0%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSS+F+Q+EEV S +A+F+PDLK+FVGNLPFSVDSA+LAGLFE AG VEMVEVI Sbjct: 88 RNVAVSSEFEQDEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMVEVI 147 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPK-QDSFGSRAPR 1222 YDK TGRSRGFGFVTMS+V+E E A Q N YE+DGR LRVN GPPPP+ +DSF R R Sbjct: 148 YDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSF--RGAR 205 Query: 1221 GGGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGF 1042 GGG DSSNR+YVGNL+WGVD+LALE LFSEQG V EA+VVYDRD+GRSRGF Sbjct: 206 GGG--------GSDSSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGF 257 Query: 1041 GFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 GFVT+ +A+E+NSA+ +LDGVDL GR IRV+ AE +PRRQF Sbjct: 258 GFVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPRPRRQF 298 >ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa] gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein [Populus trichocarpa] Length = 286 Score = 302 bits (773), Expect = 4e-79 Identities = 154/233 (66%), Positives = 188/233 (80%), Gaps = 4/233 (1%) Frame = -1 Query: 1605 QNPNQTHXXRNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERA 1426 Q P + ++V +SS+F QEE+V D+ +FSPDL++FVGNLPF+V+SA+LA LF+ A Sbjct: 55 QQPLSSRFLKSVAISSEFGQEEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSA 114 Query: 1425 GTVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQD 1246 G VEMVEV YDK+TGRSRGFGFVTMST+EEVEAA +QFN YE+DGRPLRVNSGPPP ++ Sbjct: 115 GNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRET 174 Query: 1245 SFGSRAPRGGGSFD-SPNRR---SFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARV 1078 SF SR P+ SF P R +FDSSNRVYVGNLSW VDD ALE+LF E+G V +A+V Sbjct: 175 SF-SRLPQRENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKV 233 Query: 1077 VYDRDNGRSRGFGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 VYDRD+GRS+GFGFVT+SSAEEV A+ +L+G +L GR IRVSVAEAKPRR+F Sbjct: 234 VYDRDSGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRRF 286 >ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|557530827|gb|ESR42010.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 266 Score = 301 bits (772), Expect = 5e-79 Identities = 151/205 (73%), Positives = 176/205 (85%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSS+FDQEE++ S D +NFSPDLK+FVGNLPFSVDSA+LAGLFE AG VEMVEVI Sbjct: 67 RNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVI 126 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK+TGRSRGFGFVTMS+VEEVEAA +QFN YE++GRPLRVNSGPPPP+++ F R PRG Sbjct: 127 YDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRG 186 Query: 1218 GGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFG 1039 GG+ +P+ NRVYVGNLSWGVDDLALETLF EQG V EA+VVYDR++GRSRGFG Sbjct: 187 GGA-GAPS----SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFG 241 Query: 1038 FVTFSSAEEVNSAISTLDGVDLKGR 964 FVT+SSAEEV++AI +L+GV GR Sbjct: 242 FVTYSSAEEVDNAIDSLNGVVRFGR 266 Score = 86.7 bits (213), Expect = 3e-14 Identities = 42/89 (47%), Positives = 56/89 (62%) Frame = -1 Query: 1188 SFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFVTFSSAEEV 1009 +F +++VGNL + VD L LF GNV V+YD+ GRSRGFGFVT SS EEV Sbjct: 89 NFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEV 148 Query: 1008 NSAISTLDGVDLKGRPIRVSVAEAKPRRQ 922 +A +G +L+GRP+RV+ PRR+ Sbjct: 149 EAAAQQFNGYELEGRPLRVNSGPPPPRRE 177 >ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|557530824|gb|ESR42007.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 297 Score = 300 bits (769), Expect = 1e-78 Identities = 149/200 (74%), Positives = 174/200 (87%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSS+FDQEE++ S D +NFSPDLK+FVGNLPFSVDSA+LAGLFE AG VEMVEVI Sbjct: 67 RNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVI 126 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK+TGRSRGFGFVTMS+VEEVEAA +QFN YE++GRPLRVNSGPPPP+++ F R PRG Sbjct: 127 YDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRG 186 Query: 1218 GGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFG 1039 GG+ +P+ NRVYVGNLSWGVDDLALETLF EQG V EA+VVYDR++GRSRGFG Sbjct: 187 GGA-GAPS----SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFG 241 Query: 1038 FVTFSSAEEVNSAISTLDGV 979 FVT+SSAEEV++AI +L+GV Sbjct: 242 FVTYSSAEEVDNAIDSLNGV 261 Score = 86.7 bits (213), Expect = 3e-14 Identities = 42/89 (47%), Positives = 56/89 (62%) Frame = -1 Query: 1188 SFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFVTFSSAEEV 1009 +F +++VGNL + VD L LF GNV V+YD+ GRSRGFGFVT SS EEV Sbjct: 89 NFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEV 148 Query: 1008 NSAISTLDGVDLKGRPIRVSVAEAKPRRQ 922 +A +G +L+GRP+RV+ PRR+ Sbjct: 149 EAAAQQFNGYELEGRPLRVNSGPPPPRRE 177 >ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza sativa Japonica Group] gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group] gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group] Length = 264 Score = 300 bits (768), Expect = 2e-78 Identities = 151/218 (69%), Positives = 178/218 (81%) Frame = -1 Query: 1572 VVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYD 1393 V VSS+ ++EE + F+ DLK+FVGNLPFSVDSA+LAGLFE+AG+VEMVEV+YD Sbjct: 57 VAVSSEVEEEE--GGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYD 114 Query: 1392 KLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRGGG 1213 + TGRSRGFGFVTMST EE AAVEQFN Y GRPLRVNSGPPPP+ D F R+PRGGG Sbjct: 115 RQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPR-DDFAPRSPRGGG 173 Query: 1212 SFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFV 1033 S +FDSSN++YVGNL+WGVD+ LE LFSEQG V +A+V+YDR++GRSRGFGFV Sbjct: 174 S-------NFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFV 226 Query: 1032 TFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 T+ SAEEVN+AIS LDGVDL GR IRV+VAE+KPRRQF Sbjct: 227 TYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKPRRQF 264 >gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group] Length = 259 Score = 300 bits (768), Expect = 2e-78 Identities = 151/218 (69%), Positives = 178/218 (81%) Frame = -1 Query: 1572 VVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYD 1393 V VSS+ ++EE + F+ DLK+FVGNLPFSVDSA+LAGLFE+AG+VEMVEV+YD Sbjct: 52 VAVSSEVEEEE--GGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYD 109 Query: 1392 KLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRGGG 1213 + TGRSRGFGFVTMST EE AAVEQFN Y GRPLRVNSGPPPP+ D F R+PRGGG Sbjct: 110 RQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPR-DDFAPRSPRGGG 168 Query: 1212 SFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFV 1033 S +FDSSN++YVGNL+WGVD+ LE LFSEQG V +A+V+YDR++GRSRGFGFV Sbjct: 169 S-------NFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFV 221 Query: 1032 TFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 T+ SAEEVN+AIS LDGVDL GR IRV+VAE+KPRRQF Sbjct: 222 TYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKPRRQF 259 >ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] gi|557530826|gb|ESR42009.1| hypothetical protein CICLE_v10012331mg [Citrus clementina] Length = 263 Score = 299 bits (765), Expect = 3e-78 Identities = 148/199 (74%), Positives = 173/199 (86%) Frame = -1 Query: 1578 RNVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVI 1399 RNV VSS+FDQEE++ S D +NFSPDLK+FVGNLPFSVDSA+LAGLFE AG VEMVEVI Sbjct: 67 RNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVI 126 Query: 1398 YDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRG 1219 YDK+TGRSRGFGFVTMS+VEEVEAA +QFN YE++GRPLRVNSGPPPP+++ F R PRG Sbjct: 127 YDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRG 186 Query: 1218 GGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFG 1039 GG+ +P+ NRVYVGNLSWGVDDLALETLF EQG V EA+VVYDR++GRSRGFG Sbjct: 187 GGA-GAPS----SGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFG 241 Query: 1038 FVTFSSAEEVNSAISTLDG 982 FVT+SSAEEV++AI +L+G Sbjct: 242 FVTYSSAEEVDNAIDSLNG 260 Score = 86.7 bits (213), Expect = 3e-14 Identities = 42/89 (47%), Positives = 56/89 (62%) Frame = -1 Query: 1188 SFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFVTFSSAEEV 1009 +F +++VGNL + VD L LF GNV V+YD+ GRSRGFGFVT SS EEV Sbjct: 89 NFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEV 148 Query: 1008 NSAISTLDGVDLKGRPIRVSVAEAKPRRQ 922 +A +G +L+GRP+RV+ PRR+ Sbjct: 149 EAAAQQFNGYELEGRPLRVNSGPPPPRRE 177 Score = 66.2 bits (160), Expect = 5e-08 Identities = 30/64 (46%), Positives = 43/64 (67%) Frame = -1 Query: 1494 KIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEAAVEQ 1315 +++VGNL + VD L LF G V +V+YD+ +GRSRGFGFVT S+ EEV+ A++ Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDS 257 Query: 1314 FNNY 1303 N + Sbjct: 258 LNGF 261 >ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 280 Score = 299 bits (765), Expect = 3e-78 Identities = 152/222 (68%), Positives = 186/222 (83%), Gaps = 3/222 (1%) Frame = -1 Query: 1575 NVVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIY 1396 +V +SS+F QEE+VSS D+++FS DLK+FVGNLPF+VDSA+LAGLFE AG VEMVEVIY Sbjct: 66 SVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIY 125 Query: 1395 DKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPR-- 1222 DK+TGRSRGFGFVTMS+++EVEAA +QFN YE++GR LRVNSGPPP ++ SF SR+PR Sbjct: 126 DKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSF-SRSPRFG 184 Query: 1221 -GGGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRG 1045 GGG +S NR+YVGNLSW VD+LALE+ FSEQG V +A+VVYDR++GRSRG Sbjct: 185 GGGGGGESL------EGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRG 238 Query: 1044 FGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 FGFVT+SSAEEV +AI +L+G +L GR IRVSVAEA+PRRQF Sbjct: 239 FGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280 >gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group] Length = 205 Score = 298 bits (762), Expect = 7e-78 Identities = 147/209 (70%), Positives = 172/209 (82%) Frame = -1 Query: 1545 EEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYDKLTGRSRGF 1366 EEE + F+ DLK+FVGNLPFSVDSA+LAGLFE+AG+VEMVEV+YD+ TGRSRGF Sbjct: 5 EEEEGGAESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGF 64 Query: 1365 GFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRGGGSFDSPNRRS 1186 GFVTMST EE AA+EQFN Y GRPLRVNSGPPPP+ D F R+PRGGGS + Sbjct: 65 GFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPR-DDFAPRSPRGGGS-------N 116 Query: 1185 FDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFVTFSSAEEVN 1006 FDSSN++YVGNL+WGVD+ LE LFSEQG V +A+V+YDR++GRSRGFGFVT+ SAEEVN Sbjct: 117 FDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVN 176 Query: 1005 SAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 +AIS LDGVDL GR IRV+VAE+KPRRQF Sbjct: 177 NAISNLDGVDLDGRQIRVTVAESKPRRQF 205 >sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName: Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia] Length = 292 Score = 296 bits (759), Expect = 2e-77 Identities = 156/229 (68%), Positives = 177/229 (77%), Gaps = 12/229 (5%) Frame = -1 Query: 1569 VVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYDK 1390 V SDFDQ E+ +Q FS DLK+FVGNLPFSVDSA LAGLFERAG VE+VEVIYDK Sbjct: 64 VALSDFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDK 123 Query: 1389 LTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRGGGS 1210 L+GRSRGFGFVTMST EEVEAA +QFN YEIDGR +RVN+GP P K+++ RGG S Sbjct: 124 LSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNS 183 Query: 1209 FDSPNR------------RSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDR 1066 R RS DSSNRVYVGNLSWGVDDLAL+ LFSEQGNV +A+VVYDR Sbjct: 184 SYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDR 243 Query: 1065 DNGRSRGFGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 D+GRSRGFGFVT+SSA+EVN AI +L+G+DL GR IRVS AE +PRRQF Sbjct: 244 DSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292 >ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Brachypodium distachyon] Length = 275 Score = 296 bits (759), Expect = 2e-77 Identities = 150/219 (68%), Positives = 177/219 (80%), Gaps = 4/219 (1%) Frame = -1 Query: 1572 VVVSSDFDQEE----EVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVE 1405 V VSS+F+ E+ E + G +A +S DLK+FVGNLPF+VDSA+LAGLFE+AG+VEMVE Sbjct: 55 VAVSSEFETEDAEGQEEAGGESEAEYSEDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVE 114 Query: 1404 VIYDKLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAP 1225 V+YD++TGRSRGFGFVTMST EEV AAVEQFN Y GRPLRVNSGPPPP+ D F R P Sbjct: 115 VVYDRMTGRSRGFGFVTMSTAEEVSAAVEQFNGYTFQGRPLRVNSGPPPPR-DEFAPRTP 173 Query: 1224 RGGGSFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRG 1045 RG G SFDS N++YVGNLSWGVD+ LE LFSEQG V +A+V+YDRD+GRSRG Sbjct: 174 RGMGG--GGGGGSFDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRG 231 Query: 1044 FGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPR 928 FGFVT+ SA+EVN+AIS LDGVDL GR IRV+VAE+KPR Sbjct: 232 FGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPR 270 Score = 84.7 bits (208), Expect = 1e-13 Identities = 41/84 (48%), Positives = 56/84 (66%) Frame = -1 Query: 1170 RVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFVTFSSAEEVNSAIST 991 +++VGNL + VD L LF + G+V VVYDR GRSRGFGFVT S+AEEV++A+ Sbjct: 85 KLFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSTAEEVSAAVEQ 144 Query: 990 LDGVDLKGRPIRVSVAEAKPRRQF 919 +G +GRP+RV+ PR +F Sbjct: 145 FNGYTFQGRPLRVNSGPPPPRDEF 168 Score = 76.6 bits (187), Expect = 4e-11 Identities = 37/96 (38%), Positives = 56/96 (58%) Frame = -1 Query: 1536 VSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYDKLTGRSRGFGFV 1357 + G +F K++VGNL + VD++ L LF G V +VIYD+ +GRSRGFGFV Sbjct: 176 MGGGGGGGSFDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFV 235 Query: 1356 TMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQ 1249 T + +EV A+ + ++DGR +RV P++ Sbjct: 236 TYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPRE 271 >sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName: Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris] Length = 291 Score = 296 bits (758), Expect = 2e-77 Identities = 157/229 (68%), Positives = 176/229 (76%), Gaps = 12/229 (5%) Frame = -1 Query: 1569 VVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYDK 1390 V S FDQ E+ +Q FS DLK+FVGNLPFSVDSA LAGLFERAG VEMVEVIYDK Sbjct: 63 VALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDK 122 Query: 1389 LTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRGGGS 1210 LTGRSRGFGFVTMST EEVEAA +QFN YEIDGR +RVN+GP P K+++ RGG S Sbjct: 123 LTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNS 182 Query: 1209 FDSPNR------------RSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDR 1066 R RS DSSNRVYVGNLSWGVDDLAL+ LFSEQGNV +A+VVYDR Sbjct: 183 SYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDR 242 Query: 1065 DNGRSRGFGFVTFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 D+GRSRGFGFVT+SS++EVN AI +L+GVDL GR IRVS AE +PRRQF Sbjct: 243 DSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQF 291 >ref|XP_006658862.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like, partial [Oryza brachyantha] Length = 211 Score = 296 bits (757), Expect = 3e-77 Identities = 149/218 (68%), Positives = 174/218 (79%) Frame = -1 Query: 1572 VVVSSDFDQEEEVSSGRDQANFSPDLKIFVGNLPFSVDSAELAGLFERAGTVEMVEVIYD 1393 V VS + + EE + F+ DLK+FVGNLPFSVDSA+LAGLFE+AG+VEMVEV+YD Sbjct: 2 VAVSEEVEAEESQGGEESEGEFAEDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYD 61 Query: 1392 KLTGRSRGFGFVTMSTVEEVEAAVEQFNNYEIDGRPLRVNSGPPPPKQDSFGSRAPRGGG 1213 + TGRSRGFGFVTMS+ EE AAVEQFN Y GRPLRVNSGPPP + D F R PRGGG Sbjct: 62 RQTGRSRGFGFVTMSSSEEAGAAVEQFNGYTFQGRPLRVNSGPPPAR-DEFSPRPPRGGG 120 Query: 1212 SFDSPNRRSFDSSNRVYVGNLSWGVDDLALETLFSEQGNVTEARVVYDRDNGRSRGFGFV 1033 + +FDSSN+VYVGNLSWGVD+ LE LFSEQGNV +A+V+YDR++GRSRGFGFV Sbjct: 121 N-------NFDSSNKVYVGNLSWGVDNSTLENLFSEQGNVLDAKVIYDRESGRSRGFGFV 173 Query: 1032 TFSSAEEVNSAISTLDGVDLKGRPIRVSVAEAKPRRQF 919 T+ SAEEV +AIS LDGVDL GR IRV+VAE+KPRRQF Sbjct: 174 TYGSAEEVTNAISNLDGVDLDGRQIRVTVAESKPRRQF 211