BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00000294
         (1554 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]      671   0.0  
ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Popu...   666   0.0  
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr...   655   0.0  
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]     655   0.0  
ref|XP_007207335.1| hypothetical protein PRUPE_ppa007071mg [Prun...   654   0.0  
ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putativ...   654   0.0  
ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340...   654   0.0  
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop...   653   0.0  
ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Popu...   652   0.0  
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps...   652   0.0  
gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]                    651   0.0  
ref|XP_006472242.1| PREDICTED: chloroplast stem-loop binding pro...   650   0.0  
ref|XP_007031209.1| Chloroplast RNA binding [Theobroma cacao] gi...   650   0.0  
emb|CAA71589.1| g5bf [Arabidopsis thaliana]                           650   0.0  
ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabido...   650   0.0  
gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]    650   0.0  
ref|XP_006433571.1| hypothetical protein CICLE_v10001494mg [Citr...   650   0.0  
ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding pro...   650   0.0  
emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]   650   0.0  
ref|XP_006433572.1| hypothetical protein CICLE_v10001494mg [Citr...   646   0.0  

>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 380

 Score =  671 bits (1731), Expect = 0.0
 Identities = 334/382 (87%), Positives = 356/382 (93%), Gaps = 1/382 (0%)
 Frame = +1

Query: 187  ARLVVVQQK-QPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSK 363
            ARLV VQQ+ QP FSL PSSLSDFNG R +SQ+Q KRRVW+ +    GALQV+ASSS  K
Sbjct: 2    ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTK----GALQVSASSS--K 55

Query: 364  KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKG 543
             ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQQLPGE DQD++DFSSKILHLKG
Sbjct: 56   NILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKG 115

Query: 544  DRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLP 723
            DRKDF+FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLP
Sbjct: 116  DRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLP 175

Query: 724  HCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRS 903
            H E DAVDPKSRHKGKLETESLLES+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 
Sbjct: 176  HSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 235

Query: 904  IPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGF 1083
            IPIPNSG+QMTQLGHVKDLA AF+QVLGNEKAS+QVFNISGEKYVTFDGLAKACAKAAGF
Sbjct: 236  IPIPNSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Query: 1084 PEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFG 1263
            PEPEI+HYNPK+FDFGKKKAFPFRDQHFFASIDKAK VLGW+PEFDL+EGLADSYNLDFG
Sbjct: 296  PEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFG 355

Query: 1264 RGTFRKEADFSTDDIILNKRLV 1329
            RGT+RKEADF TDD+IL K LV
Sbjct: 356  RGTYRKEADFFTDDLILGKSLV 377


>ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Populus trichocarpa]
            gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
            gi|550324645|gb|EEE95397.2| hypothetical protein
            POPTR_0013s00760g [Populus trichocarpa]
          Length = 380

 Score =  666 bits (1718), Expect = 0.0
 Identities = 331/382 (86%), Positives = 354/382 (92%), Gaps = 1/382 (0%)
 Frame = +1

Query: 187  ARLVVVQQK-QPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSK 363
            ARLV VQQ+ QP FSL PSSLSDFNG R +SQ++ KRRVW+ +    GALQV+ASSS  K
Sbjct: 2    ARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVRCKRRVWQTK----GALQVSASSS--K 55

Query: 364  KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKG 543
             ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQ LPGE DQD+ DFSSKILHLKG
Sbjct: 56   NILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKG 115

Query: 544  DRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLP 723
            DRKDF+FVKTSLAA+GFDVVYDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLP
Sbjct: 116  DRKDFEFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLP 175

Query: 724  HCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRS 903
            H E DAVDPKSRHKGKLETESLLES+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 
Sbjct: 176  HSEKDAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 235

Query: 904  IPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGF 1083
            IPIPNSG+QMTQLGHVKDLA AF+QVLGNEKAS+QVFNISGEKYVTFDGLAKACAKAAGF
Sbjct: 236  IPIPNSGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGF 295

Query: 1084 PEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFG 1263
            PEPEI+HYNPK+FDFGKKKAFPFRDQHFFASIDKAK VLGW+PEFDL+EGLADSYNLDFG
Sbjct: 296  PEPEIVHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFG 355

Query: 1264 RGTFRKEADFSTDDIILNKRLV 1329
            RGT+RKEADF TDD+I+ K LV
Sbjct: 356  RGTYRKEADFFTDDLIIGKSLV 377


>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
            gi|557095353|gb|ESQ35935.1| hypothetical protein
            EUTSA_v10007937mg [Eutrema salsugineum]
          Length = 379

 Score =  655 bits (1691), Expect = 0.0
 Identities = 315/381 (82%), Positives = 354/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V++ +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKYVTFDGLA+ACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  655 bits (1690), Expect = 0.0
 Identities = 314/381 (82%), Positives = 354/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V++ +    GAL V+ASS   KK
Sbjct: 2    AKIMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKY+TFDGLA+ACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>ref|XP_007207335.1| hypothetical protein PRUPE_ppa007071mg [Prunus persica]
            gi|462402977|gb|EMJ08534.1| hypothetical protein
            PRUPE_ppa007071mg [Prunus persica]
          Length = 383

 Score =  654 bits (1688), Expect = 0.0
 Identities = 331/385 (85%), Positives = 354/385 (91%), Gaps = 4/385 (1%)
 Frame = +1

Query: 187  ARLVVVQ--QKQPKFSL-PPSSLSDFNGIRF-NSQIQYKRRVWKQQEKQIGALQVTASSS 354
            ARLV VQ  Q+ P FSL PPSSLSDFNG R  +SQ+Q KRRV + +     ALQVTASS+
Sbjct: 2    ARLVAVQPQQRHPSFSLLPPSSLSDFNGTRLLHSQLQCKRRVSQPKV----ALQVTASSA 57

Query: 355  NSKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILH 534
              KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQQLPGE D+D+TDF+SKILH
Sbjct: 58   --KKILIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDYTDFASKILH 115

Query: 535  LKGDRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSD 714
            LKGDRKD++FVK+SL+AEGFDVVYDINGREA EV PIL+ LPKLEQYIYCSSAGVYLKSD
Sbjct: 116  LKGDRKDYEFVKSSLSAEGFDVVYDINGREAEEVVPILEGLPKLEQYIYCSSAGVYLKSD 175

Query: 715  LLPHCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 894
             LPH ETD VDPKSRHKGKLETESLLESK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 176  QLPHFETDTVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 235

Query: 895  GRSIPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 1074
            GR IP+PNSG+Q+TQLGHVKDLATAF++VLGNEKASK+VFNISGEKYVTFDGLAKACAKA
Sbjct: 236  GRPIPVPNSGIQITQLGHVKDLATAFIKVLGNEKASKEVFNISGEKYVTFDGLAKACAKA 295

Query: 1075 AGFPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNL 1254
             GFPEPEI+HYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDL+EGLADSYNL
Sbjct: 296  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLVEGLADSYNL 355

Query: 1255 DFGRGTFRKEADFSTDDIILNKRLV 1329
            DFGRGTFRKEADFSTDDIIL K LV
Sbjct: 356  DFGRGTFRKEADFSTDDIILGKSLV 380


>ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223548502|gb|EEF49993.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 381

 Score =  654 bits (1688), Expect = 0.0
 Identities = 326/383 (85%), Positives = 351/383 (91%), Gaps = 2/383 (0%)
 Frame = +1

Query: 187  ARLVVVQQK-QPKFSLPPSSLS-DFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNS 360
            ARL+ +QQ+ QP FSL  SSLS DFNG R ++QIQ KRRVW+ +    GALQVTASSS  
Sbjct: 2    ARLITIQQQTQPSFSLLTSSLSSDFNGTRLHTQIQCKRRVWQAK----GALQVTASSS-- 55

Query: 361  KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLK 540
            K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQ+LPGE DQD+ DFSSK+LHLK
Sbjct: 56   KNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLK 115

Query: 541  GDRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLL 720
            GDRKDFDFVK+SL+A+GFDVVYDINGREA EV PILDALP LEQ+IYCSSAGVYLKSDLL
Sbjct: 116  GDRKDFDFVKSSLSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDLL 175

Query: 721  PHCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 900
            PH E DAVDPKSRHKGKLETESLLES  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR
Sbjct: 176  PHSEKDAVDPKSRHKGKLETESLLESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 235

Query: 901  SIPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAG 1080
             IPIPNSG+Q+TQLGHVKDLA AF+QVLGNEKASKQVFNISGEKYVTFDGLA+ACAKA G
Sbjct: 236  PIPIPNSGIQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGG 295

Query: 1081 FPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDF 1260
            FPEPEI+HYNPKEFDFGKKKAFPFRDQHFFAS+DKAK VLGW+PEFDL+EGLADSYNLDF
Sbjct: 296  FPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVDKAKHVLGWEPEFDLVEGLADSYNLDF 355

Query: 1261 GRGTFRKEADFSTDDIILNKRLV 1329
            GRGTFRKEADF+TDD+IL K LV
Sbjct: 356  GRGTFRKEADFTTDDMILGKSLV 378


>ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
            vinifera] gi|147773479|emb|CAN73432.1| hypothetical
            protein VITISV_032681 [Vitis vinifera]
            gi|296089806|emb|CBI39625.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  654 bits (1688), Expect = 0.0
 Identities = 323/381 (84%), Positives = 347/381 (91%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            ARLVV  Q QP FSL PSSLSDFNGIR  + IQ +R+V + +    GAL VTAS    KK
Sbjct: 2    ARLVVQHQNQPSFSLLPSSLSDFNGIRLTNHIQCRRKVCQPK----GALHVTASGE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            IL+MGGTRFIG+FL+RLLVKEGHQVTLFTRGKA ITQQLPGE D+D+ +FSSK+LHLKGD
Sbjct: 56   ILMMGGTRFIGVFLARLLVKEGHQVTLFTRGKAAITQQLPGESDKDYAEFSSKVLHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKDF+FVKTSLAAEGFDVVYDINGREA E+EPILDALP L+QYIYCSSAGVY KSDLLPH
Sbjct: 116  RKDFEFVKTSLAAEGFDVVYDINGREAVEIEPILDALPNLQQYIYCSSAGVYKKSDLLPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CETDAVDPKSRHKGKLETESLL+S+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CETDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            PIPNSG+Q+TQLGHVKDLA AF+ VL NEKASKQVFNISGEKYVTFDGLA+ACAK AGFP
Sbjct: 236  PIPNSGIQITQLGHVKDLAKAFLLVLSNEKASKQVFNISGEKYVTFDGLARACAKGAGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFASI+KAKSVLGWKPEFDL+EGLADSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADFSTDDIIL K LV
Sbjct: 356  GTFRKEADFSTDDIILGKSLV 376


>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
            gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
            Full=Chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic; Short=CSP41-b; AltName:
            Full=Heteroglycan-interacting protein 1.3; AltName:
            Full=Protein CHLOROPLAST RNA BINDING; AltName:
            Full=Protein Gb5f; Flags: Precursor
            gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
            [Arabidopsis thaliana]
            gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
            [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
            Identical to gb|Y10557 g5bf gene from Arabidopsis
            thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
            gb|T22425, gb|N64934 and gb|T46767 come from this gene
            [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|17979099|gb|AAL47493.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
            chloroplast stem-loop binding protein [Arabidopsis
            thaliana]
          Length = 378

 Score =  653 bits (1684), Expect = 0.0
 Identities = 315/381 (82%), Positives = 353/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKYVTFDGLAKACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Populus trichocarpa]
            gi|550337715|gb|ERP60153.1| hypothetical protein
            POPTR_0005s01370g [Populus trichocarpa]
          Length = 380

 Score =  652 bits (1683), Expect = 0.0
 Identities = 324/382 (84%), Positives = 350/382 (91%), Gaps = 1/382 (0%)
 Frame = +1

Query: 187  ARLVVVQQK-QPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSK 363
            ARLV +QQ+ QP  SL  SSLSDFNG R +SQ+Q KRR W+ +     ALQV+ASSS  K
Sbjct: 2    ARLVAMQQQTQPSLSLLLSSLSDFNGTRLHSQVQCKRRAWQTKR----ALQVSASSS--K 55

Query: 364  KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKG 543
             ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPITQQLPGE DQD+ DFSSK+LHLKG
Sbjct: 56   NILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYADFSSKVLHLKG 115

Query: 544  DRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLP 723
            DRKDF+FVKTSLAA+GFDV+YDINGREA EVEPILDALPKLEQ+IYCSSAGVYLKSDLLP
Sbjct: 116  DRKDFEFVKTSLAAKGFDVIYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLP 175

Query: 724  HCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRS 903
            H E DAVDPKSRHKGKLETESLLESK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 
Sbjct: 176  HSEKDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 235

Query: 904  IPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGF 1083
            IPIPNSG+Q+TQLGHVKDLA AFV+VLGN+KAS+QVFNISGEKYVTFDGLA+ACAKAAGF
Sbjct: 236  IPIPNSGIQITQLGHVKDLAKAFVEVLGNDKASQQVFNISGEKYVTFDGLARACAKAAGF 295

Query: 1084 PEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFG 1263
            PEP I+HYNPKEFDFGKKKAFPFRDQHFFASIDKA+ VLGW+PEFDL+EGLADSYNLDFG
Sbjct: 296  PEPVIVHYNPKEFDFGKKKAFPFRDQHFFASIDKARHVLGWEPEFDLVEGLADSYNLDFG 355

Query: 1264 RGTFRKEADFSTDDIILNKRLV 1329
             GT+RKEADFSTDD+IL K LV
Sbjct: 356  TGTYRKEADFSTDDLILGKSLV 377


>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
            gi|482573799|gb|EOA37986.1| hypothetical protein
            CARUB_v10009455mg [Capsella rubella]
          Length = 379

 Score =  652 bits (1681), Expect = 0.0
 Identities = 314/381 (82%), Positives = 353/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQHQPSFSLLNSSLSDFNGAKLHLQVQYKRKVHQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPI++ALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF++VLGNEKAS+++FNISGEKYVTFDGLA+ACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLKVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
          Length = 378

 Score =  651 bits (1680), Expect = 0.0
 Identities = 314/381 (82%), Positives = 353/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVE+WFFHRLKAGR I
Sbjct: 176  CEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEKWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKYVTFDGLAKACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>ref|XP_006472242.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Citrus sinensis]
          Length = 380

 Score =  650 bits (1678), Expect = 0.0
 Identities = 320/383 (83%), Positives = 351/383 (91%)
 Frame = +1

Query: 181  MAARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNS 360
            MA+ +VV  Q QP FS   SSLSDFNG R +SQIQY+R+V    + ++G LQVTASS   
Sbjct: 1    MASMVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQYRRKVL---QPKVG-LQVTASSE-- 54

Query: 361  KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLK 540
            K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGE D++F +FSSKILHLK
Sbjct: 55   KNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDEEFAEFSSKILHLK 114

Query: 541  GDRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLL 720
            GDRKD+DFVK+SL+A+GFDVVYDINGREA EVEPILDALP LEQ+IYCSSAGVYLKSDLL
Sbjct: 115  GDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 174

Query: 721  PHCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 900
            PHCETDAVDPKSRHKGKL TES+LESK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGR
Sbjct: 175  PHCETDAVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 234

Query: 901  SIPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAG 1080
             IPIP SG+Q+TQLGHVKDLA AFVQVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAG
Sbjct: 235  PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 294

Query: 1081 FPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDF 1260
            FPEPE++HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGLADSYNLDF
Sbjct: 295  FPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDF 354

Query: 1261 GRGTFRKEADFSTDDIILNKRLV 1329
            GRGT+RKEADFSTDD+IL K+LV
Sbjct: 355  GRGTYRKEADFSTDDMILGKKLV 377


>ref|XP_007031209.1| Chloroplast RNA binding [Theobroma cacao] gi|508719814|gb|EOY11711.1|
            Chloroplast RNA binding [Theobroma cacao]
          Length = 379

 Score =  650 bits (1678), Expect = 0.0
 Identities = 322/382 (84%), Positives = 350/382 (91%), Gaps = 1/382 (0%)
 Frame = +1

Query: 187  ARLVVVQQ-KQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSK 363
            ++LVV Q  KQP  SL PSSLSDF+G +   Q QYKR+VW+ +    GAL V A+S+  K
Sbjct: 2    SKLVVFQPTKQPSISLLPSSLSDFSGTKL-CQFQYKRKVWQPK----GALHVAAAST--K 54

Query: 364  KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKG 543
            KIL+MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPD +++DF SKILHLKG
Sbjct: 55   KILVMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDSEYSDFKSKILHLKG 114

Query: 544  DRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLP 723
            DRKDF+FVK+SL+AEGFDVVYDINGREA EVEPILDALP LEQYIYCSSAGVYLKSDLLP
Sbjct: 115  DRKDFEFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKSDLLP 174

Query: 724  HCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRS 903
            HCETDAVDPKSRHKGKL TE+LL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGR 
Sbjct: 175  HCETDAVDPKSRHKGKLNTENLLASRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRP 234

Query: 904  IPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGF 1083
            IPIPNSGVQ+TQLGHVKDLA AF+QVLGNEKASKQVFNISGEKYVTFDGLA+ACAKAAGF
Sbjct: 235  IPIPNSGVQITQLGHVKDLAKAFIQVLGNEKASKQVFNISGEKYVTFDGLARACAKAAGF 294

Query: 1084 PEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFG 1263
            PEPEI+HYNPKEFDFGKKKAFPFRDQHFFASI+KAK VLGW+PEFDL+EGLADSYNLDFG
Sbjct: 295  PEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIEKAKHVLGWEPEFDLVEGLADSYNLDFG 354

Query: 1264 RGTFRKEADFSTDDIILNKRLV 1329
            RGT+RKEADFSTDD+IL K LV
Sbjct: 355  RGTYRKEADFSTDDMILGKTLV 376


>emb|CAA71589.1| g5bf [Arabidopsis thaliana]
          Length = 378

 Score =  650 bits (1678), Expect = 0.0
 Identities = 314/381 (82%), Positives = 352/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLK D+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKFDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKYVTFDGLAKACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>ref|XP_002889743.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp.
            lyrata] gi|297335585|gb|EFH66002.1| catalytic/ coenzyme
            binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  650 bits (1678), Expect = 0.0
 Identities = 313/381 (82%), Positives = 351/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK----GALHVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSRLLVK GHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGVFLSRLLVKGGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDL TAF+ VLGNEKAS+++FNISGEKYVTFDGLAKACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLGTAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD++L+K+LV
Sbjct: 356  GTFRKEADFTTDDMVLSKKLV 376


>gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 378

 Score =  650 bits (1678), Expect = 0.0
 Identities = 314/381 (82%), Positives = 352/381 (92%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKK 366
            A+++++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KK
Sbjct: 2    AKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK----GALYVSASSE--KK 55

Query: 367  ILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGD 546
            ILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGD
Sbjct: 56   ILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGD 115

Query: 547  RKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPH 726
            RKD+DFVK+SL+AEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPH
Sbjct: 116  RKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPH 175

Query: 727  CETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSI 906
            CE DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR I
Sbjct: 176  CEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPI 235

Query: 907  PIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFP 1086
            P+PNSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKYVTFDGLA ACAKA GFP
Sbjct: 236  PVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAXACAKAGGFP 295

Query: 1087 EPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGR 1266
            EPEI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGR
Sbjct: 296  EPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGR 355

Query: 1267 GTFRKEADFSTDDIILNKRLV 1329
            GTFRKEADF+TDD+IL+K+LV
Sbjct: 356  GTFRKEADFTTDDMILSKKLV 376


>ref|XP_006433571.1| hypothetical protein CICLE_v10001494mg [Citrus clementina]
            gi|557535693|gb|ESR46811.1| hypothetical protein
            CICLE_v10001494mg [Citrus clementina]
          Length = 380

 Score =  650 bits (1676), Expect = 0.0
 Identities = 319/383 (83%), Positives = 350/383 (91%)
 Frame = +1

Query: 181  MAARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNS 360
            MA+ +VV  Q QP FS   SSLSDFNG R +SQIQY+R+V    + ++G LQ+TASS   
Sbjct: 1    MASTVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQYRRKVL---QPKVG-LQITASSE-- 54

Query: 361  KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLK 540
            K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGE DQ+F +FSSKILHLK
Sbjct: 55   KNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK 114

Query: 541  GDRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLL 720
            GDRKD+DFVK+SL+A+GFDVVYDINGREA EVEPILDALP LEQ+IYCSSAGVYLKSDLL
Sbjct: 115  GDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 174

Query: 721  PHCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 900
            PHCETD VDPKSRHKGKL TES+LESK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGR
Sbjct: 175  PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 234

Query: 901  SIPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAG 1080
             IPIP SG+Q+TQLGHVKDLA AFVQVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAG
Sbjct: 235  PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 294

Query: 1081 FPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDF 1260
            FPEPE++HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGLADSYNLDF
Sbjct: 295  FPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDF 354

Query: 1261 GRGTFRKEADFSTDDIILNKRLV 1329
            GRGT+RKEADFSTDD+IL K+LV
Sbjct: 355  GRGTYRKEADFSTDDMILGKKLV 377


>ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 380

 Score =  650 bits (1676), Expect = 0.0
 Identities = 326/382 (85%), Positives = 350/382 (91%), Gaps = 1/382 (0%)
 Frame = +1

Query: 187  ARLVVVQQKQPKFSLPPSSLSDFNGIRF-NSQIQYKRRVWKQQEKQIGALQVTASSSNSK 363
            A+LV VQ+      LPPSSLSDFNG R  +S +Q+KRRV + +    GALQV+ASS+  K
Sbjct: 2    AKLVSVQRHPSVSLLPPSSLSDFNGTRLLHSHLQFKRRVSQPR----GALQVSASSA--K 55

Query: 364  KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKG 543
            KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGE D D+TDF+SKILHLKG
Sbjct: 56   KILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDYTDFASKILHLKG 115

Query: 544  DRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLP 723
            DRKDFDFVK+SL+AEGFDVVYDINGREA E+ PILD LPKLEQYIYCSSAGVYLKSD LP
Sbjct: 116  DRKDFDFVKSSLSAEGFDVVYDINGREAEEIVPILDGLPKLEQYIYCSSAGVYLKSDQLP 175

Query: 724  HCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRS 903
            H E DAVDPKSRHKGKLETESLLES+ VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 
Sbjct: 176  HFEIDAVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRP 235

Query: 904  IPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGF 1083
            IP+PNSG+Q+TQLGHVKDLATAFV+VL NEKASK+VFNISGEKYVTFDGLAKACAKAAGF
Sbjct: 236  IPVPNSGIQITQLGHVKDLATAFVKVLCNEKASKEVFNISGEKYVTFDGLAKACAKAAGF 295

Query: 1084 PEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFG 1263
            PEPEI+HYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPE+DL+EGLADSYNLDFG
Sbjct: 296  PEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEYDLVEGLADSYNLDFG 355

Query: 1264 RGTFRKEADFSTDDIILNKRLV 1329
            RGTFRKEADFSTDD+IL K LV
Sbjct: 356  RGTFRKEADFSTDDMILGKSLV 377


>emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
          Length = 374

 Score =  650 bits (1676), Expect = 0.0
 Identities = 314/378 (83%), Positives = 350/378 (92%)
 Frame = +1

Query: 196  VVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNSKKILI 375
            +++QQ QP FSL  SSLSDFNG + + Q+QYKR+V + +    GAL V+ASS   KKILI
Sbjct: 1    MMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPK----GALYVSASSE--KKILI 54

Query: 376  MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLKGDRKD 555
            MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PI +QLPGE DQDF DFSSKILHLKGDRKD
Sbjct: 55   MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 114

Query: 556  FDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHCET 735
            +DFVK+SL+AEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD+LPHCE 
Sbjct: 115  YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 174

Query: 736  DAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRSIPIP 915
            DAVDPKSRHKGKLETESLL+SK VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR IP+P
Sbjct: 175  DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 234

Query: 916  NSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAGFPEPE 1095
            NSG+Q++QLGHVKDLATAF+ VLGNEKAS+++FNISGEKYVTFDGLAKACAKA GFPEPE
Sbjct: 235  NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 294

Query: 1096 IIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDFGRGTF 1275
            I+HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGL DSYNLDFGRGTF
Sbjct: 295  IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 354

Query: 1276 RKEADFSTDDIILNKRLV 1329
            RKEADF+TDD+IL+K+LV
Sbjct: 355  RKEADFTTDDMILSKKLV 372


>ref|XP_006433572.1| hypothetical protein CICLE_v10001494mg [Citrus clementina]
            gi|557535694|gb|ESR46812.1| hypothetical protein
            CICLE_v10001494mg [Citrus clementina]
          Length = 381

 Score =  646 bits (1667), Expect = 0.0
 Identities = 319/383 (83%), Positives = 348/383 (90%)
 Frame = +1

Query: 181  MAARLVVVQQKQPKFSLPPSSLSDFNGIRFNSQIQYKRRVWKQQEKQIGALQVTASSSNS 360
            MA+ +VV  Q QP FS   SSLSDFNG R +SQIQ  RR  K  + ++G LQ+TASS   
Sbjct: 1    MASTVVVQHQTQPSFSTLTSSLSDFNGTRIHSQIQQYRR--KVLQPKVG-LQITASSE-- 55

Query: 361  KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPITQQLPGEPDQDFTDFSSKILHLK 540
            K ILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGE DQ+F +FSSKILHLK
Sbjct: 56   KNILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLK 115

Query: 541  GDRKDFDFVKTSLAAEGFDVVYDINGREATEVEPILDALPKLEQYIYCSSAGVYLKSDLL 720
            GDRKD+DFVK+SL+A+GFDVVYDINGREA EVEPILDALP LEQ+IYCSSAGVYLKSDLL
Sbjct: 116  GDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLL 175

Query: 721  PHCETDAVDPKSRHKGKLETESLLESKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGR 900
            PHCETD VDPKSRHKGKL TES+LESK VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGR
Sbjct: 176  PHCETDTVDPKSRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGR 235

Query: 901  SIPIPNSGVQMTQLGHVKDLATAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAAG 1080
             IPIP SG+Q+TQLGHVKDLA AFVQVLGNEKAS+QVFNISGEKYVTFDGLA+ACAKAAG
Sbjct: 236  PIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAG 295

Query: 1081 FPEPEIIHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGWKPEFDLIEGLADSYNLDF 1260
            FPEPE++HYNPKEFDFGKKKAFPFRDQHFFAS++KAK VLGWKPEFDL+EGLADSYNLDF
Sbjct: 296  FPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDF 355

Query: 1261 GRGTFRKEADFSTDDIILNKRLV 1329
            GRGT+RKEADFSTDD+IL K+LV
Sbjct: 356  GRGTYRKEADFSTDDMILGKKLV 378