BLASTX nr result
ID: Akebia24_contig00000199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00000199
(415 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003618736.1| Ribulose bisphosphate carboxylase small chai... 137 2e-30
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 137 2e-30
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 135 5e-30
gb|AFK40375.1| unknown [Medicago truncatula] 135 5e-30
sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox... 135 8e-30
gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK4565... 135 8e-30
gb|AFK33868.1| unknown [Lotus japonicus] 135 8e-30
ref|XP_003618735.1| Ribulose bisphosphate carboxylase small chai... 134 1e-29
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 134 1e-29
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 133 3e-29
gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/o... 132 4e-29
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai... 132 4e-29
sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carbox... 132 5e-29
gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 132 5e-29
emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subu... 132 7e-29
sp|Q08186.1|RBS6_MESCR RecName: Full=Ribulose bisphosphate carbo... 131 1e-28
ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chai... 131 1e-28
gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subun... 131 1e-28
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 130 1e-28
gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides] 130 1e-28
>ref|XP_003618736.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
gi|217071562|gb|ACJ84141.1| unknown [Medicago
truncatula] gi|355493751|gb|AES74954.1| Ribulose
bisphosphate carboxylase small chain [Medicago
truncatula]
Length = 180
Score = 137 bits (345), Expect = 2e-30
Identities = 62/76 (81%), Positives = 69/76 (90%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AAFPVT+K NND +S+ SNGG+V CMQVWPPIG KKFETLSYLPPLT+EQLAKEV
Sbjct: 28 GLKSSAAFPVTKKTNNDITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTEEQLAKEV 87
Query: 235 EYLLRSGWVPCLEFDL 188
EYL+R GWVPCLEF+L
Sbjct: 88 EYLIRKGWVPCLEFEL 103
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 137 bits (344), Expect = 2e-30
Identities = 64/76 (84%), Positives = 72/76 (94%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AAFPVTRKVN D +SLPSNGG+V+CM+VWPP+GLKKFETLSYLPPLT E+LAKEV
Sbjct: 30 GLKSTAAFPVTRKVN-DITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPPLTNEELAKEV 88
Query: 235 EYLLRSGWVPCLEFDL 188
+YLLRSGWVPCLEF+L
Sbjct: 89 DYLLRSGWVPCLEFEL 104
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 135 bits (341), Expect = 5e-30
Identities = 64/76 (84%), Positives = 72/76 (94%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AAFPVTRKVN D +SLPSNGG+V+CM+VWPP+GLKKFETLSYLP LTQEQL+KEV
Sbjct: 30 GLKSTAAFPVTRKVN-DITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEV 88
Query: 235 EYLLRSGWVPCLEFDL 188
+YLLRSGWVPCLEF+L
Sbjct: 89 DYLLRSGWVPCLEFEL 104
>gb|AFK40375.1| unknown [Medicago truncatula]
Length = 180
Score = 135 bits (341), Expect = 5e-30
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AAFPVT+K NND +S+ SNGG+V CMQVWPPIG KKFETLSYLPPLT+EQL KEV
Sbjct: 28 GLKSSAAFPVTKKTNNDITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTEEQLVKEV 87
Query: 235 EYLLRSGWVPCLEFDL 188
EYL+R GWVPCLEF+L
Sbjct: 88 EYLIRKGWVPCLEFEL 103
>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|3044116|gb|AAC13293.1|
ribulose-1,5-bisphosphate carboxylase small subunit
[Medicago sativa]
Length = 180
Score = 135 bits (339), Expect = 8e-30
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS A FPVT+K NND +S+ SNGG+V CMQVWPP+G KKFETLSYLPPLT+EQLAKEV
Sbjct: 28 GLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEV 87
Query: 235 EYLLRSGWVPCLEFDL 188
EYL+R GW+PCLEF+L
Sbjct: 88 EYLIRKGWIPCLEFEL 103
>gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK45650.1| unknown
[Lotus japonicus]
Length = 177
Score = 135 bits (339), Expect = 8e-30
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS+A FPVTRK NND +S+ SNGG+V CMQVWPPIG KKFETLSYLPPLT EQLAKEV
Sbjct: 25 GLKSMAGFPVTRKANNDITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTVEQLAKEV 84
Query: 235 EYLLRSGWVPCLEFD 191
EYL+R GWVPCLEF+
Sbjct: 85 EYLIRKGWVPCLEFE 99
>gb|AFK33868.1| unknown [Lotus japonicus]
Length = 177
Score = 135 bits (339), Expect = 8e-30
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS+A FPVTRK NND +S+ SNGG+V CMQVWPPIG KKFETLSYLPPLT EQLAKEV
Sbjct: 25 GLKSMAGFPVTRKANNDITSIASNGGRVNCMQVWPPIGKKKFETLSYLPPLTVEQLAKEV 84
Query: 235 EYLLRSGWVPCLEFD 191
EYL+R GWVPCLEF+
Sbjct: 85 EYLIRKGWVPCLEFE 99
>ref|XP_003618735.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
gi|355493750|gb|AES74953.1| Ribulose bisphosphate
carboxylase small chain [Medicago truncatula]
Length = 177
Score = 134 bits (338), Expect = 1e-29
Identities = 60/76 (78%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS A FPVT+K NND +S+ SNGG+V CMQVWPPIG KKFETLSYLPPLT++QLAKEV
Sbjct: 25 GLKSSAGFPVTKKTNNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPPLTEDQLAKEV 84
Query: 235 EYLLRSGWVPCLEFDL 188
EYL+R GWVPCLEF+L
Sbjct: 85 EYLIRKGWVPCLEFEL 100
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 134 bits (337), Expect = 1e-29
Identities = 59/76 (77%), Positives = 70/76 (92%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS +AFP+TRK N+D +SLPSNGG+V+CMQVWPP+GLKKFETLSYLPPLT E LAKEV
Sbjct: 30 GLKSASAFPITRKTNSDITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTSESLAKEV 89
Query: 235 EYLLRSGWVPCLEFDL 188
++LLR+ WVPCLEF+L
Sbjct: 90 DFLLRNKWVPCLEFEL 105
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 133 bits (334), Expect = 3e-29
Identities = 61/75 (81%), Positives = 70/75 (93%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS +AFPVTRK +ND +SLPSNGG+V+CMQVWPP+GLKKFETLSYLPPLT QLAKE+
Sbjct: 30 GLKSASAFPVTRK-SNDITSLPSNGGRVQCMQVWPPVGLKKFETLSYLPPLTPTQLAKEI 88
Query: 235 EYLLRSGWVPCLEFD 191
+YLLRSGWVPCLEF+
Sbjct: 89 DYLLRSGWVPCLEFE 103
>gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Lactuca sativa]
Length = 181
Score = 132 bits (333), Expect = 4e-29
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AFPVT+K NNDFSSLPSNGG+V+CM+VWPPIGLKK+ETLSYLPPL+ E L+KE+
Sbjct: 28 GLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEI 87
Query: 235 EYLLRSGWVPCLEFDL 188
+YL+R+ WVPCLEF+L
Sbjct: 88 DYLIRNKWVPCLEFEL 103
>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
precursor, putative [Ricinus communis]
gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
carboxylase small chain 1B, chloroplast precursor,
putative [Ricinus communis]
Length = 181
Score = 132 bits (333), Expect = 4e-29
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS A+FPVTRK NND +S+ SNGG+V+CMQVWPP+G KKFETLSYLP LT EQLAKEV
Sbjct: 27 GLKSAASFPVTRKANNDITSIASNGGRVQCMQVWPPLGKKKFETLSYLPDLTDEQLAKEV 86
Query: 235 EYLLRSGWVPCLEFDL 188
+YLLR GW+PCLEF+L
Sbjct: 87 DYLLRKGWIPCLEFEL 102
>sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|217946|dbj|BAA03103.1|
riburose-1,5-bisphosphate carboxylase/oxygenase small
subunit precursor [Lactuca sativa]
Length = 181
Score = 132 bits (332), Expect = 5e-29
Identities = 57/76 (75%), Positives = 70/76 (92%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AFPVT+K NNDFSSLPSNGG+V+CM+VWPPIGLKK+ETLSYLPPL+ E L+KE+
Sbjct: 28 GLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEI 87
Query: 235 EYLLRSGWVPCLEFDL 188
+YL+R+ W+PCLEF+L
Sbjct: 88 DYLIRNKWIPCLEFEL 103
>gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Rosa
roxburghii]
Length = 179
Score = 132 bits (332), Expect = 5e-29
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AAFP+TRK N+D +SLPSNGG+V+CM+VWP +G+KKFETLSYLPPL+ E LAKEV
Sbjct: 29 GLKSAAAFPITRKTNSDITSLPSNGGRVQCMKVWPTVGMKKFETLSYLPPLSPESLAKEV 88
Query: 235 EYLLRSGWVPCLEFDL 188
+YLLR GWVPCLEF+L
Sbjct: 89 DYLLRKGWVPCLEFEL 104
>emb|CAA10290.1| ribulose 1,5-bisphosphate carboxylase small subunit [Cicer
arietinum]
Length = 181
Score = 132 bits (331), Expect = 7e-29
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS+A FPV RKVNND +S+ SNGG+V CMQVWPPIG KKFETLSYLPPLT+EQL KEV
Sbjct: 30 GLKSMAGFPV-RKVNNDITSIASNGGRVHCMQVWPPIGKKKFETLSYLPPLTEEQLLKEV 88
Query: 235 EYLLRSGWVPCLEFDL 188
EYLLR GWVPCLEF+L
Sbjct: 89 EYLLRKGWVPCLEFEL 104
>sp|Q08186.1|RBS6_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 6,
chloroplastic; Short=RuBisCO small subunit 6; Flags:
Precursor gi|304447|gb|AAA03698.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 186
Score = 131 bits (329), Expect = 1e-28
Identities = 57/75 (76%), Positives = 69/75 (92%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS++AFPVTRK +ND S++PSNGGKV+CMQVWPP+G KKFETLSYLPPL++E L KEV
Sbjct: 32 GLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEV 91
Query: 235 EYLLRSGWVPCLEFD 191
+YLL +GWVPCLEF+
Sbjct: 92 QYLLNNGWVPCLEFE 106
>ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528742|gb|EEF30752.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 180
Score = 131 bits (329), Expect = 1e-28
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS + FPVTRK NND ++L SNGGKV CMQVWPP+G KKFETLSYLPPL++E LAKEV
Sbjct: 28 GLKSSSVFPVTRKQNNDITTLASNGGKVHCMQVWPPVGKKKFETLSYLPPLSEESLAKEV 87
Query: 235 EYLLRSGWVPCLEFDL 188
+YLLR GWVPCLEF+L
Sbjct: 88 DYLLRMGWVPCLEFEL 103
>gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subunit [Chrysanthemum
x morifolium]
Length = 179
Score = 131 bits (329), Expect = 1e-28
Identities = 61/76 (80%), Positives = 71/76 (93%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS AFPVT+K +NDFSSLPSNGG+V+CM+VWPP+GLKK+ETLSYLPPLT+ QLAKEV
Sbjct: 28 GLKSNVAFPVTKK-SNDFSSLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEV 86
Query: 235 EYLLRSGWVPCLEFDL 188
EYLLR+ WVPCLEF+L
Sbjct: 87 EYLLRNKWVPCLEFEL 102
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 130 bits (328), Expect = 1e-28
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS +AFPVTRK N D ++L +NGG+V+CMQVWPP+G KKFETLSYLP LT+EQLAKEV
Sbjct: 30 GLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLSYLPDLTREQLAKEV 89
Query: 235 EYLLRSGWVPCLEFDL 188
EYLLR GWVPCLEF+L
Sbjct: 90 EYLLRKGWVPCLEFEL 105
>gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 181
Score = 130 bits (328), Expect = 1e-28
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -1
Query: 415 GLKSIAAFPVTRKVNNDFSSLPSNGGKVRCMQVWPPIGLKKFETLSYLPPLTQEQLAKEV 236
GLKS +AFPVTRK NND +S+ SNGG+V+CMQVWPP GLKKFETLSYLP LT EQLA+E+
Sbjct: 29 GLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTTEQLAREI 88
Query: 235 EYLLRSGWVPCLEFDL 188
EYLLR+ WVPCLEF+L
Sbjct: 89 EYLLRNKWVPCLEFEL 104