BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00000169
         (4130 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1924   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1911   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1897   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1897   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1895   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1862   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1856   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1850   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1840   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1803   0.0  
ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps...  1790   0.0  
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...  1784   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1781   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1776   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1776   0.0  
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas...  1776   0.0  
ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t...  1775   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...  1774   0.0  
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...  1773   0.0  
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...  1770   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1924 bits (4984), Expect = 0.0
 Identities = 948/1138 (83%), Positives = 1040/1138 (91%), Gaps = 3/1138 (0%)
 Frame = -3

Query: 3951 SIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV 3772
            SI K F + PVK  VDKF LLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S V
Sbjct: 5    SIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSV 64

Query: 3771 DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 3592
            DP +YL++KDVRIGEPSIT D  +  L PH CRLSD TYAAPI+V+IEY  GSH +K  +
Sbjct: 65   DPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRV 124

Query: 3591 TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 3412
             KN++VIGRMPIMLRSC CVL +KDE ELARLGECPLDPGGYFVVKGTEKVILIQEQLSK
Sbjct: 125  EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 184

Query: 3411 NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 3232
            NRIII++DKKG + ASVTSSTE+TKSKTVIVM+KEKI+LQLN FT+ IPIM++MKAMGME
Sbjct: 185  NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 244

Query: 3231 SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPR 3052
            SDQEVVQMVGR+PRY ALLLPS++ECA+  IYTQ+QALEFLE+KVK+  F N SLEKE R
Sbjct: 245  SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGR 304

Query: 3051 AMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQ 2872
             M ILRD F+ANVPVRQ NFRPKC+YVAVMLRRMM+AILNKDAMDDKDYVGNKRLELSGQ
Sbjct: 305  GMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQ 364

Query: 2871 LISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAH---YLMRDIITHGLERAISTGN 2701
            LISLLFEDLFKTM SE+KK  D  LAKPSRSSR D +    +++RD IT GLER +STGN
Sbjct: 365  LISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGN 424

Query: 2700 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 2521
            WD+KRF+MHRKGM+QV+ARLS+I +LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD
Sbjct: 425  WDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 484

Query: 2520 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 2341
            TPEGEACGLVKNLALMTHVTTDE+E+PLISLCYSLGVEDLELLSGEELHT NSFL+IFNG
Sbjct: 485  TPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNG 544

Query: 2340 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 2161
            LILGKHRRP+ FA A+RKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRP+VIADKG 
Sbjct: 545  LILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGK 604

Query: 2160 SRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFT 1981
            SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYE +A+PETTHIEIEPFT
Sbjct: 605  SRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFT 664

Query: 1980 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTR 1801
            ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+Y+LVYPQRPLLTTR
Sbjct: 665  ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTR 724

Query: 1800 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYA 1621
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA+NQ+Y 
Sbjct: 725  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYE 784

Query: 1620 NNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSL 1441
            NN SDRI+RP +VG +AERMQILDDDGLA+PGEII+P+DIYINK+SPI T+  + S + L
Sbjct: 785  NNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGL 844

Query: 1440 PDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQK 1261
            PDSAYK + QT+KGP+GE +VVDRVAL SDK++NLC KF+IRHTRRPE+GDKFSSRHGQK
Sbjct: 845  PDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQK 904

Query: 1260 GVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAF 1081
            GVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAF
Sbjct: 905  GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 964

Query: 1080 GEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDK 901
            GEPSGHAD+VE IS+TLVK GFSYSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 965  GEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1024

Query: 900  MHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQV 721
            MHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQV
Sbjct: 1025 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1084

Query: 720  CRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            CRVCGLLGY+NHKLK GICSTCKNGDNISTM+LPYACKLLFQELQ+MNVVPRLKLTEA
Sbjct: 1085 CRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1911 bits (4951), Expect = 0.0
 Identities = 945/1147 (82%), Positives = 1036/1147 (90%), Gaps = 1/1147 (0%)
 Frame = -3

Query: 3984 NNQSMGSSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 3805
            NN +  +  E  +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI
Sbjct: 12   NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71

Query: 3804 VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 3625
            V AN+ I S VDP +YL++KDVRIGEPS+T +  +  + PH CRLSD TYAAPI V+IEY
Sbjct: 72   VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131

Query: 3624 TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 3445
              GSH +K  + KN++VIGRMPIMLRSC CVL  KDE ELARLGECPLDPGGYFV+KG E
Sbjct: 132  IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191

Query: 3444 KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 3265
            KVILIQEQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 3264 IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 3085
            IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA   IYTQEQALE+LE KVKR  
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 3084 FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 2905
            ++  + EKE RA+ ILRDVF+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 2904 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 2728
            VGNKRLELSGQLISLLFEDLFKT  SE++K  DL L+KPSRSS LD + +L  R+ IT G
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 431

Query: 2727 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2548
            LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS
Sbjct: 432  LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 491

Query: 2547 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2368
            QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT 
Sbjct: 492  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 551

Query: 2367 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 2188
            NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR
Sbjct: 552  NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 611

Query: 2187 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 2008
            PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET
Sbjct: 612  PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 671

Query: 2007 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 1828
            THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 672  THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 731

Query: 1827 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1648
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+
Sbjct: 732  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 791

Query: 1647 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 1468
             SA+NQKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR
Sbjct: 792  YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 851

Query: 1467 DTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 1288
             +  SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GD
Sbjct: 852  GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 911

Query: 1287 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 1108
            KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS 
Sbjct: 912  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 971

Query: 1107 GRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 928
            GRFHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQ
Sbjct: 972  GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1031

Query: 927  KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 748
            KLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI
Sbjct: 1032 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1091

Query: 747  SSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVP 568
            SSDPFEVQVCR CGLLGY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VP
Sbjct: 1092 SSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVP 1151

Query: 567  RLKLTEA 547
            RLKL+EA
Sbjct: 1152 RLKLSEA 1158


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1897 bits (4914), Expect = 0.0
 Identities = 935/1145 (81%), Positives = 1032/1145 (90%), Gaps = 1/1145 (0%)
 Frame = -3

Query: 3978 QSMGSSGEESI-DKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIV 3802
            Q  GS  +E + DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV
Sbjct: 5    QVEGSPKDEQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV 64

Query: 3801 AANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYT 3622
             AN+ I S +DP ++L++KDVRIG+PS+T D  +  L PHMCRLSD TYAAPI+V+IEY 
Sbjct: 65   RANDRIVSGIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYV 124

Query: 3621 NGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEK 3442
             GSH +K  M KN++VIGR+PIMLRSCRCVL  KDE ELARLGECPLDPGGYF++KGTEK
Sbjct: 125  QGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEK 184

Query: 3441 VILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPI 3262
            V+LIQEQLSKNR+II++DKKG + ASVTSSTE  KSKTVI M+K K+YL LN F   IPI
Sbjct: 185  VLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPI 244

Query: 3261 MVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTF 3082
            MV+MKAMG+ESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQE+ALE+LE KVKR TF
Sbjct: 245  MVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTF 304

Query: 3081 SNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYV 2902
             +   ++E RA  ILRDVF+ANVPV   NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYV
Sbjct: 305  GSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYV 364

Query: 2901 GNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLE 2722
            GNKRLELSGQL+SLLFEDLFKTM SE++K  D+ L+KPSRSSR D++ +++RD IT GLE
Sbjct: 365  GNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLE 424

Query: 2721 RAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQW 2542
            R +STGN+D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQW
Sbjct: 425  RTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQW 484

Query: 2541 GMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNS 2362
            GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH  NS
Sbjct: 485  GMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNS 544

Query: 2361 FLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPL 2182
            FLVIFNGLILGKHRRPK FA  MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPL
Sbjct: 545  FLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPL 604

Query: 2181 VIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTH 2002
            VIADKGISRIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTH
Sbjct: 605  VIADKGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTH 664

Query: 2001 IEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQ 1822
            IEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQ
Sbjct: 665  IEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQ 724

Query: 1821 RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLS 1642
            RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +
Sbjct: 725  RPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYT 784

Query: 1641 AINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDT 1462
            AINQKYAN+TSDRI+RP R G  AERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR +
Sbjct: 785  AINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGS 844

Query: 1461 ITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKF 1282
            I S     DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKF
Sbjct: 845  IMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKF 904

Query: 1281 SSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGR 1102
            SSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GR
Sbjct: 905  SSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGR 964

Query: 1101 FHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKL 922
            FHYGSAFGEPSGHAD VE+ISETLVK GFSY+GKD +YSG  G PLQAYIFMGPIYYQKL
Sbjct: 965  FHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKL 1024

Query: 921  KHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISS 742
            KHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SS
Sbjct: 1025 KHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSS 1084

Query: 741  DPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRL 562
            DPFEVQVCRVCGLLGY+NHKLK GICSTCKNGDNIS+M+LPYACKLL QELQSMN+VPRL
Sbjct: 1085 DPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRL 1144

Query: 561  KLTEA 547
            KL EA
Sbjct: 1145 KLAEA 1149


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1897 bits (4914), Expect = 0.0
 Identities = 940/1147 (81%), Positives = 1031/1147 (89%), Gaps = 1/1147 (0%)
 Frame = -3

Query: 3984 NNQSMGSSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 3805
            NN +  +  E  +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI
Sbjct: 12   NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71

Query: 3804 VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 3625
            V AN+ I S VDP +YL++KDVRIGEPS+T +  +  + PH CRLSD TYAAPI V+IEY
Sbjct: 72   VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131

Query: 3624 TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 3445
              GSH +K  + KN++VIGRMPIMLRSC CVL  KDE ELARLGECPLDPGGYFV+KG E
Sbjct: 132  IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191

Query: 3444 KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 3265
            K     EQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F   IP
Sbjct: 192  K-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 246

Query: 3264 IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 3085
            IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA   IYTQEQALE+LE KVKR  
Sbjct: 247  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 306

Query: 3084 FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 2905
            ++  + EKE RA+ ILRDVF+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY
Sbjct: 307  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 366

Query: 2904 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 2728
            VGNKRLELSGQLISLLFEDLFKT  SE++K  DL L+KPSRSS LD + +L  R+ IT G
Sbjct: 367  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 426

Query: 2727 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2548
            LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS
Sbjct: 427  LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 486

Query: 2547 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2368
            QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT 
Sbjct: 487  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 546

Query: 2367 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 2188
            NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR
Sbjct: 547  NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 606

Query: 2187 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 2008
            PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET
Sbjct: 607  PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 666

Query: 2007 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 1828
            THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 667  THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 726

Query: 1827 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 1648
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+
Sbjct: 727  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 786

Query: 1647 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 1468
             SA+NQKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR
Sbjct: 787  YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 846

Query: 1467 DTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 1288
             +  SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GD
Sbjct: 847  GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 906

Query: 1287 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 1108
            KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS 
Sbjct: 907  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 966

Query: 1107 GRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 928
            GRFHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQ
Sbjct: 967  GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1026

Query: 927  KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 748
            KLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI
Sbjct: 1027 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1086

Query: 747  SSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVP 568
            SSDPFEVQVCR CGLLGY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VP
Sbjct: 1087 SSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVP 1146

Query: 567  RLKLTEA 547
            RLKL+EA
Sbjct: 1147 RLKLSEA 1153


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1895 bits (4908), Expect = 0.0
 Identities = 931/1137 (81%), Positives = 1028/1137 (90%)
 Frame = -3

Query: 3957 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3778
            E+  DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV AN+ I S
Sbjct: 13   EQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVS 72

Query: 3777 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3598
             +DP ++L++KDVRIG+PS+T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K 
Sbjct: 73   GIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKT 132

Query: 3597 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3418
             M KN++VIGR+PIMLRSCRCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQL
Sbjct: 133  TMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQL 192

Query: 3417 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 3238
            SKNR+II++DKKG + ASVTSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG
Sbjct: 193  SKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMG 252

Query: 3237 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 3058
            MESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E
Sbjct: 253  MESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE 312

Query: 3057 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2878
             RA  ILRDVF+ANVPV   NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELS
Sbjct: 313  GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372

Query: 2877 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2698
            GQL+SLLFEDLFKTM SE++K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+
Sbjct: 373  GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432

Query: 2697 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2518
            D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 433  DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492

Query: 2517 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2338
            PEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGL
Sbjct: 493  PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552

Query: 2337 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 2158
            ILGKHRRPK FA  MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGIS
Sbjct: 553  ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612

Query: 2157 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1978
            RIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTI
Sbjct: 613  RIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672

Query: 1977 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1798
            LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 673  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732

Query: 1797 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1618
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN
Sbjct: 733  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792

Query: 1617 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1438
            +TSDRI+RP R G  +ERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR +I S     
Sbjct: 793  STSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQT 852

Query: 1437 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 1258
            DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKG
Sbjct: 853  DSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKG 912

Query: 1257 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 1078
            VCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFG
Sbjct: 913  VCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 972

Query: 1077 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 898
            EPSGHAD VE+ISETLVK GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 973  EPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1032

Query: 897  HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 718
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVC
Sbjct: 1033 HARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVC 1092

Query: 717  RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            RVCGLLGY+NHKLK GICSTCKNG+NIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1093 RVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1862 bits (4822), Expect = 0.0
 Identities = 920/1150 (80%), Positives = 1023/1150 (88%), Gaps = 5/1150 (0%)
 Frame = -3

Query: 3981 NQSMGSSGEES---IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIK 3811
            + +M ++ E+S   IDKQ L++P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IK
Sbjct: 4    DSTMSNTTEDSNQGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 63

Query: 3810 KIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSI 3631
            KIV AN  I S +DP +YL+Y+DV IGEPS+  D  T  L P  CRLSD TYAAPI V+I
Sbjct: 64   KIVRANQEIRSILDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 123

Query: 3630 EYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKG 3451
            EYT GSH + +V TK N++IGRMPIMLRS  CVL  KDEDELARLGECPLDPGGYFV+KG
Sbjct: 124  EYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 183

Query: 3450 TEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAM 3271
            TEKVILIQEQLSKNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F   
Sbjct: 184  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 243

Query: 3270 IPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKV 3097
            +PIMV+MKAMGMESDQEVVQM+GRDPR+ ALLLPSI+ECA   +YTQ QALEFLE  K +
Sbjct: 244  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKML 303

Query: 3096 KRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMD 2917
            K  ++S   +EK  RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 304  KMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 363

Query: 2916 DKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDII 2737
            DKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++  D  LA+PSRSSRLDI+ Y+++D I
Sbjct: 364  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSI 423

Query: 2736 THGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRAL 2557
            T GLER +STGNWD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRAL
Sbjct: 424  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 483

Query: 2556 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEEL 2377
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 484  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 543

Query: 2376 HTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGR 2197
            H   S+L+  NGLILGKH+ P+ FA AMR+LRRAGKIGEFVS+FVNEKQ CVYIASDGGR
Sbjct: 544  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGR 603

Query: 2196 VCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAE 2017
            VCRPLVIADKG+SRIKEHHM+ELRDGVR F+ FL++GL+EYLDVNE+NN LIALYE EA 
Sbjct: 604  VCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 663

Query: 2016 PETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1837
            PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+
Sbjct: 664  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 723

Query: 1836 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1657
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 724  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 783

Query: 1656 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1477
            MKK SAI QKY N TSDRII+PQR G EA++MQILDDDG+A+PGE IR HDIYINK+SP 
Sbjct: 784  MKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPT 843

Query: 1476 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 1297
             TR  ITS M LPDSAYKT+ QTYKGP+GETAVVDRVAL+SD++NNL  KF+IRHTRRPE
Sbjct: 844  VTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 903

Query: 1296 IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 1117
            IGDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG
Sbjct: 904  IGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 963

Query: 1116 VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 937
            VS GRFHYGSAFGEPSGHAD V++ISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPI
Sbjct: 964  VSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1023

Query: 936  YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 757
            YYQKLKHMVLDKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ER
Sbjct: 1024 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1083

Query: 756  LMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMN 577
            LMISSDPFEVQVCR CGLLGY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN
Sbjct: 1084 LMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMN 1143

Query: 576  VVPRLKLTEA 547
            +VPRLKL EA
Sbjct: 1144 IVPRLKLAEA 1153


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1856 bits (4808), Expect = 0.0
 Identities = 914/1150 (79%), Positives = 1023/1150 (88%), Gaps = 5/1150 (0%)
 Frame = -3

Query: 3981 NQSMGSSGEES---IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIK 3811
            + +M ++ E+S   IDKQ L++ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IK
Sbjct: 34   DSTMSNTTEDSNQGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIK 93

Query: 3810 KIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSI 3631
            KIV AN  I S +DP +YL+Y+DV IGEPS+  D  T  L P  CRLSD TYAAPI V+I
Sbjct: 94   KIVRANQEIRSTLDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTI 153

Query: 3630 EYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKG 3451
            +YT GSH + +V TK N++IGRMPIMLRS  CVL  KDEDELARLGECPLDPGGYFV+KG
Sbjct: 154  DYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKG 213

Query: 3450 TEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAM 3271
            TEKVILIQEQLSKNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F   
Sbjct: 214  TEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTK 273

Query: 3270 IPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKV 3097
            +PIMV+MKAMGMESDQEVVQM+GRDPR+ ALLLPSI+ECA   +YTQ+QALEFLE  K +
Sbjct: 274  VPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKML 333

Query: 3096 KRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMD 2917
            K  ++S   +EK  RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMD
Sbjct: 334  KMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMD 393

Query: 2916 DKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDII 2737
            DKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++  D  LA+PSRSSRLDI+ Y+++D I
Sbjct: 394  DKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSI 453

Query: 2736 THGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRAL 2557
            T GLER +STGNWD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRAL
Sbjct: 454  TMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRAL 513

Query: 2556 QPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEEL 2377
            QPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EEL
Sbjct: 514  QPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEEL 573

Query: 2376 HTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGR 2197
            H   S+L+  NGLILGKH+ P+ FA AMR+LRRAGK+GEFVS+FVNEKQ CVYIASDGGR
Sbjct: 574  HMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGR 633

Query: 2196 VCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAE 2017
            VCRPLVIADKG+SRIKEHHM+ELRDG+R F+ FL++GL+EYLDVNE+NN LIALYE EA 
Sbjct: 634  VCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEAT 693

Query: 2016 PETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1837
            PETTHIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+
Sbjct: 694  PETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYL 753

Query: 1836 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1657
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 754  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 813

Query: 1656 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1477
            MKK SAI QKY N TSDRII+PQR G EA+RMQILDDDG+A+PGE IR HDIYINK+SP 
Sbjct: 814  MKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPT 873

Query: 1476 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 1297
             TR  +TS M LPDSAYK++ QTYKGP+GETAVVDRVAL+SD++NNL  KF+IRHTRRPE
Sbjct: 874  VTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPE 933

Query: 1296 IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 1117
            +GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG
Sbjct: 934  LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 993

Query: 1116 VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 937
            VS GRFHYGSAFGEPSGHAD V+AISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPI
Sbjct: 994  VSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPI 1053

Query: 936  YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 757
            YYQKLKHMV+DKMHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ER
Sbjct: 1054 YYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYER 1113

Query: 756  LMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMN 577
            LMISSDPFEVQVCR CGLLGY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN
Sbjct: 1114 LMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMN 1173

Query: 576  VVPRLKLTEA 547
            +VPRLKL EA
Sbjct: 1174 IVPRLKLAEA 1183


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1850 bits (4792), Expect = 0.0
 Identities = 918/1151 (79%), Positives = 1020/1151 (88%), Gaps = 4/1151 (0%)
 Frame = -3

Query: 3987 TNNQSMGSSG---EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTG 3817
            + N+ +G +    +  IDKQF+  P+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNT 
Sbjct: 10   SKNEKLGDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTE 69

Query: 3816 IKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIV 3637
            IKKIV AN+ I S  DP +YL++ DVRIGEPS+T +  +  + PHMCRLSD TYAAPI+V
Sbjct: 70   IKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILV 129

Query: 3636 SIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVV 3457
             IEY   SH +K    K ++VIGRMPIMLRS  CVL+ KDE ELARLGECPLDPGGYF++
Sbjct: 130  DIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFII 189

Query: 3456 KGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFT 3277
            KGTEKV+LIQEQLSKNRIII++DKKG + ASVTSSTEATKSKTVI M+ EKIYLQLN FT
Sbjct: 190  KGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFT 249

Query: 3276 A-MIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKK 3100
               IPIMV++KAMGMES QEVVQMVGRDPRYGALLLPSI+ECA   IYTQEQALE+LE K
Sbjct: 250  TPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETK 309

Query: 3099 VKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAM 2920
            VK+F F++A  EKE RA+ ILRDVF+ANVPV + NF PKCIYVAVM+RRMM+AIL+KDAM
Sbjct: 310  VKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAM 369

Query: 2919 DDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI 2740
            DDKDYVGNKRLELSGQLISLLFEDLFKTM SE+KK  D  L K SRSSR D + +L  +I
Sbjct: 370  DDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNI 429

Query: 2739 ITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRA 2560
            I+ GLER +STGNWD+KRF+MHRKGM+QVLARLSFI+T+GH+T++SPQFEKSRKVSGPRA
Sbjct: 430  ISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRA 489

Query: 2559 LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEE 2380
            LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLS EE
Sbjct: 490  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEE 549

Query: 2379 LHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGG 2200
            LHT NSFLVIFNG ILGKHRRP++FA  MR LRRAGKIGEFVSVFVNEKQ CVYIASDGG
Sbjct: 550  LHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGG 609

Query: 2199 RVCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEA 2020
            RVCRPLVIADKG+SRIKE+HMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA
Sbjct: 610  RVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEA 669

Query: 2019 EPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIY 1840
             PETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y
Sbjct: 670  TPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLY 729

Query: 1839 MLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 1660
            +LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 730  LLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 789

Query: 1659 VMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSP 1480
            V KK S++NQKY NNT+DRI+RP R       MQILDDDGLA+PGEIIRP+DIY+NKQSP
Sbjct: 790  VFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSP 849

Query: 1479 INTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRP 1300
            I  +   +    +PD+AY+   Q +KG +GE  VVDRVAL +DK++ LC KF+IR TRRP
Sbjct: 850  IIMKG--SPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRP 907

Query: 1299 EIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKA 1120
            E+GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKA
Sbjct: 908  ELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 967

Query: 1119 GVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGP 940
            GVS GRFHYGSAFGEPSGHAD+V+AISETL+K+GFSY+GKDFLYSG  G PLQAYIFMGP
Sbjct: 968  GVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGP 1027

Query: 939  IYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFE 760
            IYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+E
Sbjct: 1028 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYE 1087

Query: 759  RLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSM 580
            RLMISSDPFEVQVCRVCGLLGY+NHKLKTGICS+CKNGDNISTM+LPYACKLL QELQSM
Sbjct: 1088 RLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSM 1147

Query: 579  NVVPRLKLTEA 547
            N+VPRLKL EA
Sbjct: 1148 NIVPRLKLAEA 1158


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1840 bits (4767), Expect = 0.0
 Identities = 909/1137 (79%), Positives = 1012/1137 (89%)
 Frame = -3

Query: 3957 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3778
            E+ IDKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+ I S
Sbjct: 19   EQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVS 78

Query: 3777 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3598
             VDPG+YL++KDVRIG PS   D  +  L+PHMCRLSD TYAAPI+V++EY  GSHD+K 
Sbjct: 79   TVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKT 138

Query: 3597 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3418
             + KN++VIGRMPIMLRS  CVL  KDE ELARLGECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 139  RVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQL 198

Query: 3417 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 3238
            SKNRIII++DKKG + ASVTSSTEATKSKT+I M+KEK+YL LN F   IPIMV++KAMG
Sbjct: 199  SKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMG 258

Query: 3237 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 3058
            MESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQ++ALE+L+ K             E
Sbjct: 259  MESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK-------------E 305

Query: 3057 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2878
             RA+ ILRDVF+ANVPV + NFRPKC+YVAVMLRRMMEA+LNKDAMDDKDYVGNKRLELS
Sbjct: 306  NRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELS 365

Query: 2877 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2698
            GQLISLLFEDLFKTM +E+++  D  L K +RSSR D+A Y++RD IT+GLER +STGN+
Sbjct: 366  GQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNF 425

Query: 2697 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2518
            D+KRFKMHRKGMTQVL RLS+IA+LG MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 426  DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485

Query: 2517 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2338
            PEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLSGEELHT NSFLVIFNGL
Sbjct: 486  PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545

Query: 2337 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 2158
            ILGKHRRP++F  +MRKLRRAGKIGEFVSVFVNEKQ  VY+ASDGGRVCRPLVIAD+G+S
Sbjct: 546  ILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVS 605

Query: 2157 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1978
            RIKEHHMKELRDGVRTF+DFLR+GL+EYLDVNE+NNAL+ALYEGEA PETTHIEIEPFTI
Sbjct: 606  RIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTI 665

Query: 1977 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1798
            LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL+RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 666  LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRT 725

Query: 1797 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1618
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI QKY N
Sbjct: 726  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYEN 785

Query: 1617 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1438
              SDRI+RP R     ER ++LD DGLA+PGEII+P DIY+ K+ PI+T   + SS +L 
Sbjct: 786  GASDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALE 842

Query: 1437 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 1258
            +  Y+ +  +YKGP+GE+ V+DRVAL SD++NNLC K +IRHTRRPE+GDKFSSRHGQKG
Sbjct: 843  NIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKG 902

Query: 1257 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 1078
            VCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFG
Sbjct: 903  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 962

Query: 1077 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 898
            EPSGHAD VEAISETLV +GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 963  EPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1022

Query: 897  HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 718
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQVC
Sbjct: 1023 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVC 1082

Query: 717  RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            RVCGLLGYFN KL+ GICSTCKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1083 RVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1803 bits (4669), Expect = 0.0
 Identities = 893/1141 (78%), Positives = 1003/1141 (87%), Gaps = 3/1141 (0%)
 Frame = -3

Query: 3960 GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLIT 3781
            G+   D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+LI 
Sbjct: 27   GDSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIV 86

Query: 3780 SDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKK 3601
            +   P +YL++ +V IG+PSI  D  T  LTP  CRLSD TYAAPI   +EYT GSHDK 
Sbjct: 87   ASRYPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKP 146

Query: 3600 NVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQ 3421
            ++  K  + IGRMPIMLRSC CVL+ +DE ELA+LGECPLDPGGYFV+KGTEKVILIQEQ
Sbjct: 147  DIKRKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQ 206

Query: 3420 LSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAM 3241
            LSKNRIII++DKKG + ASVTSSTE  K+KTV+VM+KEK++LQLN F   +P+MV+MKAM
Sbjct: 207  LSKNRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAM 266

Query: 3240 GMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEK 3061
            GMESDQEV QMVGRDPRY  LLLPSI+EC    +YT+EQALE+L+K VKR T+SN + EK
Sbjct: 267  GMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEK 326

Query: 3060 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 2881
            E  A   LRDVF+ANVPV Q NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLEL
Sbjct: 327  EGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 386

Query: 2880 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAIST 2707
            SGQLISLLFEDLFK+M +E+K  TD  L KP ++   DI   L R   IIT GLER +ST
Sbjct: 387  SGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLST 446

Query: 2706 GNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 2527
            GN+++KRF+M RKGMTQVL RLSFI  LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 447  GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 506

Query: 2526 CDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIF 2347
            CDTPEGE+CGLVKNLALMTHVTTDE+E PLISLC SLGVED++ LS EELHT +SFLVIF
Sbjct: 507  CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIF 566

Query: 2346 NGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADK 2167
            NGLILGKHRRP HFA A+RKLRRAGKIGEFVSV+VNEKQ CVY+ASDGGRVCRPLVIADK
Sbjct: 567  NGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 626

Query: 2166 GISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEP 1987
            GISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NNALIALYEG+A  ETTHIEIEP
Sbjct: 627  GISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 686

Query: 1986 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLT 1807
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLT
Sbjct: 687  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 746

Query: 1806 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQK 1627
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK +AI QK
Sbjct: 747  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 806

Query: 1626 YANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTIT-SS 1450
            ++N+TSDRI+RP R    A RMQILDDDG+A+PGEI+RP+DIYINKQSPI+TR   T S+
Sbjct: 807  HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866

Query: 1449 MSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRH 1270
             +LPDSAY++  Q++KG  GE  VVDRV L SDKDNN+C KF+IRHTRRPE+GDKFSSRH
Sbjct: 867  ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 924

Query: 1269 GQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYG 1090
            GQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYG
Sbjct: 925  GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 984

Query: 1089 SAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMV 910
            SAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMV
Sbjct: 985  SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1044

Query: 909  LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 730
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1045 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1104

Query: 729  VQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTE 550
            VQVC  CGLLGY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +
Sbjct: 1105 VQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 1164

Query: 549  A 547
            A
Sbjct: 1165 A 1165


>ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella]
            gi|482548616|gb|EOA12810.1| hypothetical protein
            CARUB_v10025768mg [Capsella rubella]
          Length = 1160

 Score = 1790 bits (4635), Expect = 0.0
 Identities = 880/1160 (75%), Positives = 1012/1160 (87%), Gaps = 14/1160 (1%)
 Frame = -3

Query: 3984 NNQSMGSSGEES-IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKK 3808
            + + + S+ +++ I+K+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNY +N GIKK
Sbjct: 4    DQEDLDSTNDDNFINKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYLINVGIKK 63

Query: 3807 IVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIE 3628
            IV AN LITS  DP +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IE
Sbjct: 64   IVKANCLITSTADPSIYLRFKAVRVGEPSILNINMAEQINPHMCRLADMTYAAPIHVNIE 123

Query: 3627 YTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGT 3448
            Y +GSH +K    KNN++IGRMPIMLRSCRCVLN KDEDELARLGECPLDPGGYFV+KGT
Sbjct: 124  YVHGSHGEKQTSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGT 183

Query: 3447 EKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMI 3268
            EKV+LIQEQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KE+IYL L+ F   I
Sbjct: 184  EKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKKI 243

Query: 3267 PIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRF 3088
            PI++++KAMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ 
Sbjct: 244  PIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKT 303

Query: 3087 TFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKD 2908
            ++    L+K+ RA+ ILRD+F+A+VPVR  NFR KC YV VMLRRM+EA+LNKDAMDDKD
Sbjct: 304  SYG-PPLQKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKD 362

Query: 2907 YVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHG 2728
            YVGNKRLELSGQLISLLFEDLFKTM +E  K  D+ L K +R+SR D +  L  DII+ G
Sbjct: 363  YVGNKRLELSGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSGDIISLG 422

Query: 2727 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 2548
            LER +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPS
Sbjct: 423  LERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPS 482

Query: 2547 QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 2368
            QWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT 
Sbjct: 483  QWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTP 542

Query: 2367 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 2188
            +SFLVI NGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCR
Sbjct: 543  DSFLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCR 602

Query: 2187 PLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE- 2011
            PLVIADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A  E 
Sbjct: 603  PLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATTEL 662

Query: 2010 ------------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ 1867
                        TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQ
Sbjct: 663  DEGGEAAKIRADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ 722

Query: 1866 LYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 1687
            L RMDTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 723  LNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 782

Query: 1686 LDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPH 1507
            LDRGFGRCIVMKK+ A +QKY NNT DRI+RPQR G +AE+MQILD+DG+ASPGEIIRP+
Sbjct: 783  LDRGFGRCIVMKKIVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIASPGEIIRPN 842

Query: 1506 DIYINKQSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFK 1327
            D+YINKQSP++T++ +T+ +S  DS Y+ A + +KGP+GET VVDRVAL S+K ++LC K
Sbjct: 843  DVYINKQSPVDTKNKMTTQLS--DSQYRPAREYFKGPEGETQVVDRVALCSNKHDHLCIK 900

Query: 1326 FIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGK 1147
            +IIRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GK
Sbjct: 901  YIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGK 960

Query: 1146 MIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSP 967
            MIELLG KAGVS GRFHYGSAFGE  GHAD+VE IS TLV KGFSYSGKD LYSG  G P
Sbjct: 961  MIELLGSKAGVSCGRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLYSGISGEP 1020

Query: 966  LQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 787
            LQAYIFMGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIA
Sbjct: 1021 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIA 1080

Query: 786  YGASMMIFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACK 607
            YGASM+I+ERLM+SSDPFEVQVCR CGLLGY+++KLK   CSTCKNGDNI+TM+LPYACK
Sbjct: 1081 YGASMLIYERLMVSSDPFEVQVCRACGLLGYYSYKLKKAFCSTCKNGDNIATMKLPYACK 1140

Query: 606  LLFQELQSMNVVPRLKLTEA 547
            LLFQELQSMNVVPRLKL EA
Sbjct: 1141 LLFQELQSMNVVPRLKLIEA 1160


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score = 1784 bits (4620), Expect = 0.0
 Identities = 880/1150 (76%), Positives = 1003/1150 (87%), Gaps = 16/1150 (1%)
 Frame = -3

Query: 3948 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 3769
            +D+Q LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+LITS +D
Sbjct: 17   VDRQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFVNVGIKKIVRANSLITSSLD 76

Query: 3768 PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 3589
            P +YL++K+VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH K     
Sbjct: 77   PEIYLRFKEVRVGEPSILNVNMAEEINPHMCRLADMTYAAPIYVNIEYAHGSHGKTQHSA 136

Query: 3588 KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 3409
            K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQEQLSKN
Sbjct: 137  KDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 3408 RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 3229
            RIII+SDKKG + ASVTSSTE TKSKTVI M+K KIYL L+ F   IPI++++KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFLHQFVKKIPIIIVLKAMGMES 256

Query: 3228 DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 3049
            DQE+VQMVGRDPR+ A LLPSI+EC +  + T++QAL++LE KVK+ ++     EK+ RA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAKVKKTSYGPPP-EKDGRA 315

Query: 3048 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 2869
            + ILRDVF+A+VPVR  NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL
Sbjct: 316  LYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 2868 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERAISTGNW 2698
            ISLLFEDLFKTM +E  K  D  L KP+R+SR D +  L  +    I+ GLER +STGN+
Sbjct: 376  ISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTGEKNHNISFGLERTLSTGNF 435

Query: 2697 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2518
            D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDT
Sbjct: 436  DIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDT 495

Query: 2517 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2338
            PEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFLVIFNGL
Sbjct: 496  PEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVIFNGL 555

Query: 2337 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 2158
            ILGKHRRP++FA ++R+LRRAGKIGEFVSVF+NEKQ CVY+ASDGGRVCRPLVIADKG+S
Sbjct: 556  ILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVIADKGVS 615

Query: 2157 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE----------- 2011
            R+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A  E           
Sbjct: 616  RVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATSEMAETAEAAKIR 675

Query: 2010 --TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYM 1837
              TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+
Sbjct: 676  EGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYL 735

Query: 1836 LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1657
            LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS +GYDIEDAIVMNK+SLDRGFGRCIV
Sbjct: 736  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFGRCIV 795

Query: 1656 MKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPI 1477
            MKK+ A  QKY N+  DRI+RPQR G +AE+MQILDDDG+A+PGEIIRP+D+YINKQ P+
Sbjct: 796  MKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIPV 855

Query: 1476 NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPE 1297
            +TRD ITS +S  DS Y+ A + +KGP+GET VVDRVAL SDK+ NLC K+IIRHTRRPE
Sbjct: 856  DTRDNITSPLS--DSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKYIIRHTRRPE 913

Query: 1296 IGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAG 1117
            +GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAG
Sbjct: 914  LGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAG 973

Query: 1116 VSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPI 937
            V SGRFHYGSAFGE SGHAD+VE IS TLVK GFSYSGKD LYSG  G PLQ Y+FMGPI
Sbjct: 974  VCSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKDLLYSGLSGEPLQTYVFMGPI 1033

Query: 936  YYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFER 757
            YYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ER
Sbjct: 1034 YYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYER 1093

Query: 756  LMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMN 577
            LMISSDPFEVQVCR CGLLGY+N+KLK   CSTCKNGDNI+TM+LPYACKLLFQELQSMN
Sbjct: 1094 LMISSDPFEVQVCRTCGLLGYYNYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMN 1153

Query: 576  VVPRLKLTEA 547
            VVPRLKL EA
Sbjct: 1154 VVPRLKLVEA 1163


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
            [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 1781 bits (4614), Expect = 0.0
 Identities = 878/1134 (77%), Positives = 985/1134 (86%)
 Frame = -3

Query: 3948 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 3769
            IDK+ L+AP+KS  DKF L+PEFLKVRGLVKQHLDSFNYFVNTGIKKIV AN+ I S VD
Sbjct: 33   IDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVD 92

Query: 3768 PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 3589
            P ++L++ +V I  PS+T D  T  + PH CRLSD TY+API V +EY  GSHD+K + T
Sbjct: 93   PSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGSHDQKMIAT 152

Query: 3588 KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 3409
            +  I IGR+PIMLRSC C L  K E ELA LGECPLDPGGYF++KG EKV+LIQEQLSKN
Sbjct: 153  RKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQLSKN 212

Query: 3408 RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 3229
            RIII+ DKKG + ASVTSS+E  KSKT+I M+K+KIYL+LN F+  IPIMV+MKAMGM S
Sbjct: 213  RIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIPIMVVMKAMGMTS 272

Query: 3228 DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 3049
            DQEVVQMVGRDPRYGALL+PSI+ECA   IYT+EQAL +LE KVKR  F +AS +K+ + 
Sbjct: 273  DQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFDSASSDKDSKV 332

Query: 3048 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 2869
            M +LRD+F+ANVPVR+ NFRPKCIYVAVMLRR+M+AILNKD MDDKDYVGNKRLELSGQ 
Sbjct: 333  MAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRLELSGQS 392

Query: 2868 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLK 2689
            ISLLFEDLFKTM SE++K  D  L KPSRSSR D+A Y+ +D I+ GLER +STGN+DLK
Sbjct: 393  ISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLSTGNFDLK 452

Query: 2688 RFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 2509
            RFKMHR GMTQVLARLSFI +LG MT+  PQFEKSRKVSGPRALQPSQWGMLCPCDTPEG
Sbjct: 453  RFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 512

Query: 2508 EACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILG 2329
            EACGLVKNLALM HVTTDE+E PLISLC  LGVEDLE LS EELH+ NSFLV+FNG ILG
Sbjct: 513  EACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLFNGDILG 572

Query: 2328 KHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 2149
            KHR+P+  A AMRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISR+K
Sbjct: 573  KHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGISRVK 632

Query: 2148 EHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGV 1969
            E+HM+EL  GVRTF+DFL +GL+EYLDVNEQNNALIALYE EA  ETTHIEIEPFTILGV
Sbjct: 633  EYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEPFTILGV 692

Query: 1968 CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIEL 1789
             AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R+D L+Y+LVYPQRPLLTT+TIEL
Sbjct: 693  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLTTKTIEL 751

Query: 1788 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTS 1609
            VG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI+MKK    NQ Y+NNT 
Sbjct: 752  VGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQNYSNNTQ 811

Query: 1608 DRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLPDSA 1429
            DRII+P +   ++ +M++LDDDG+A+PGEII  +DIY+ KQ PI TR  I S   L DS 
Sbjct: 812  DRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRS--GLKDSD 869

Query: 1428 YKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCG 1249
            Y++  Q YKGP GE+ VVD+VALFSDK NNLC K +IRHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 870  YRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQKGVCG 929

Query: 1248 IIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPS 1069
             IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPS
Sbjct: 930  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 989

Query: 1068 GHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHAR 889
            GHAD+VEAISETLV+ GFSY GKD++ SG  G PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 990  GHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1049

Query: 888  ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRVC 709
              GPRV LTRQPTEG++R+GGLR+GEMERDCLIAYGASM+++ERLMISSDPFEVQVCRVC
Sbjct: 1050 GSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQVCRVC 1109

Query: 708  GLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            GLLGY+NHK+K GICS+CKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1110 GLLGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1776 bits (4601), Expect = 0.0
 Identities = 872/1058 (82%), Positives = 958/1058 (90%)
 Frame = -3

Query: 3720 ITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSC 3541
            +T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K  M KN++VIGR+PIMLRSC
Sbjct: 1    MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC 60

Query: 3540 RCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASV 3361
            RCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR+II++DKKG + ASV
Sbjct: 61   RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV 120

Query: 3360 TSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGA 3181
            TSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG+ESDQEVVQMVGRDPRY A
Sbjct: 121  TSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSA 180

Query: 3180 LLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQ 3001
            LLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E RA  ILRDVF+ANVPV  
Sbjct: 181  LLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHN 240

Query: 3000 LNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEI 2821
             NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL+SLLFEDLFKTM SE+
Sbjct: 241  NNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEV 300

Query: 2820 KKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLKRFKMHRKGMTQVLARL 2641
            +K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+D+KRFKMHRKGMTQVLARL
Sbjct: 301  QKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARL 360

Query: 2640 SFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 2461
            SFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT
Sbjct: 361  SFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 420

Query: 2460 TDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLR 2281
            TDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGLILGKHRRPK FA  MRKLR
Sbjct: 421  TDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLR 480

Query: 2280 RAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFND 2101
            RAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISRIKEHHMKEL DGVR+F+D
Sbjct: 481  RAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDD 540

Query: 2100 FLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRN 1921
            FLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV AGLIP+PHHNQSPRN
Sbjct: 541  FLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRN 600

Query: 1920 TYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 1741
            TYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAV
Sbjct: 601  TYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 660

Query: 1740 MSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERM 1561
            MSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN+TSDRI+RP R G  AERM
Sbjct: 661  MSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERM 720

Query: 1560 QILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETA 1381
            QILDDDGLA+PGEII+P+D+YINK+SP+ TR +I S     DS Y++A QTYKGP GET 
Sbjct: 721  QILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETC 780

Query: 1380 VVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGIS 1201
            VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKGVCG IVQQED PFSERGI 
Sbjct: 781  VVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC 840

Query: 1200 PDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKK 1021
            PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGSAFGEPSGHAD VE+ISETLVK 
Sbjct: 841  PDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKH 900

Query: 1020 GFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGR 841
            GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR
Sbjct: 901  GFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGR 960

Query: 840  SRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICS 661
            +R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVCRVCGLLGY+NHKLK GICS
Sbjct: 961  ARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICS 1020

Query: 660  TCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            TCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1021 TCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1776 bits (4601), Expect = 0.0
 Identities = 882/1158 (76%), Positives = 1003/1158 (86%), Gaps = 18/1158 (1%)
 Frame = -3

Query: 3966 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3787
            ++ +  IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GIKKIV AN  
Sbjct: 11   TNDDNFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCR 70

Query: 3786 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3607
            I S  DP +YL++K+VR+GEPSI     +  + PHMCRL+D TYAAPI V+IEY +GSH 
Sbjct: 71   IASVTDPSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHG 130

Query: 3606 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3427
            KK    KN+ +IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQ
Sbjct: 131  KKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQ 190

Query: 3426 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 3247
            EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++K
Sbjct: 191  EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLK 250

Query: 3246 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 3067
            AMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     
Sbjct: 251  AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPP- 309

Query: 3066 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2887
            EK+ RA+ ILRD+F+A+VPVR  NFR KC YV VMLRRM+EA+LNKD+MDDKDYVGNKRL
Sbjct: 310  EKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRL 369

Query: 2886 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM----RDIITHGLER 2719
            ELSGQL+SLLFEDLFKTM SE  K  D  L+KPSR+SR D + YL     ++ I+ GLER
Sbjct: 370  ELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLER 429

Query: 2718 AISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWG 2539
             +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWG
Sbjct: 430  TLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWG 489

Query: 2538 MLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSF 2359
            MLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SF
Sbjct: 490  MLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSF 549

Query: 2358 LVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLV 2179
            LVI NGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCRPLV
Sbjct: 550  LVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLV 609

Query: 2178 IADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE---- 2011
            IADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE EA  E    
Sbjct: 610  IADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEG 669

Query: 2010 ---------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYR 1858
                     TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R
Sbjct: 670  AEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNR 729

Query: 1857 MDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1678
            MDTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDR
Sbjct: 730  MDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDR 789

Query: 1677 GFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIY 1498
            GFGRCIVMKK+ A  QKY N T DRI+ PQR G +AE+MQILDDDG+ASPGEIIRP+D+Y
Sbjct: 790  GFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVY 849

Query: 1497 INKQSPI-NTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFI 1321
            I KQ P+  TRD ITS +S  DS Y+ A + +KGP+GET VVDRVAL SDK  +LC K+I
Sbjct: 850  IYKQIPVCTTRDKITSPLS--DSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYI 907

Query: 1320 IRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMI 1141
            IRHTRRPE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GKMI
Sbjct: 908  IRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMI 967

Query: 1140 ELLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQ 961
            ELLG KAGVS GRFHYGSAFGE SGHAD+VE IS+TLV KGFSYSGKD LYSG  G PL+
Sbjct: 968  ELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLE 1027

Query: 960  AYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYG 781
            AYIFMGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYG
Sbjct: 1028 AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYG 1087

Query: 780  ASMMIFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLL 601
            ASM+I+ERLMISSDPFEVQVCR CGLLGY+N+KLK  +CSTCKNGDNI+TM+LPYACKLL
Sbjct: 1088 ASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMKLPYACKLL 1147

Query: 600  FQELQSMNVVPRLKLTEA 547
            FQELQSMNVVPRLKL EA
Sbjct: 1148 FQELQSMNVVPRLKLVEA 1165


>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
            gi|561026273|gb|ESW24958.1| hypothetical protein
            PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1776 bits (4599), Expect = 0.0
 Identities = 879/1140 (77%), Positives = 996/1140 (87%), Gaps = 3/1140 (0%)
 Frame = -3

Query: 3957 EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 3778
            +   D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV ANNLI++
Sbjct: 24   DSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANNLISA 83

Query: 3777 DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 3598
               P +YL++ +V+I +P I  +  T  +TP  CRLSD TYAAPI V +EYT+GS D   
Sbjct: 84   TRHPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPR 143

Query: 3597 VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 3418
            +  + N+ IGRMPIMLRSC CVL  +D+ ELA+LGECPLDPGGYFVVKGTEKVILIQEQL
Sbjct: 144  LHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQL 203

Query: 3417 SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 3238
            SKNRIII++DKKG + ASVTSSTE  K+KT+IVM+ EK++L LN F   +P+M +MKAMG
Sbjct: 204  SKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMAVMKAMG 263

Query: 3237 MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 3058
            +ESDQEV QMVGRDPRY  LLLPS +EC   N+YTQEQALE+L+K VKR  +S+ S EKE
Sbjct: 264  IESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAEKE 323

Query: 3057 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2878
             RA  +LRDVF+ANVPV   NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLELS
Sbjct: 324  GRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 383

Query: 2877 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAISTG 2704
            GQLISLLFEDLFK+M +E+K  TD  L KP ++   DI+  L R  +IIT GLER +STG
Sbjct: 384  GQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLSTG 443

Query: 2703 NWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 2524
            N+++KRF+M RKGMTQVL RLSFI  +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 444  NFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 503

Query: 2523 DTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFN 2344
            DTPEGE+CGLVKNLALMTHVTTDE+E+PLIS+CYSLGVEDLELLS EELHT +SFLVI N
Sbjct: 504  DTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVILN 563

Query: 2343 GLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKG 2164
            GLILGKH+RP  FA A+RKLRR GKIGEFVSVFV+EKQ CVY+ASDGGRVCRPLVIADKG
Sbjct: 564  GLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADKG 623

Query: 2163 ISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPF 1984
            ISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NN LIALYEG+A  ETTHIEIEPF
Sbjct: 624  ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEPF 683

Query: 1983 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTT 1804
            TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTT
Sbjct: 684  TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 743

Query: 1803 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKY 1624
            +TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK SA+ QK+
Sbjct: 744  KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQKH 803

Query: 1623 ANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSM- 1447
            +N+TSDRI+RP R    A RM+ILDDDG+A+PGEI++P DIYINKQSPI+TR   T +  
Sbjct: 804  SNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAAG 863

Query: 1446 SLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHG 1267
            +LPDSAY++  Q++KG  GE  VVDRV L SDKD N+C KF+IRHTRRPE+GDKFSSRHG
Sbjct: 864  NLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRHG 921

Query: 1266 QKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGS 1087
            QKGVCG IVQQED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHYGS
Sbjct: 922  QKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 981

Query: 1086 AFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVL 907
            AFGE SGHAD+VEAISETLV KGFSYSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMVL
Sbjct: 982  AFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1041

Query: 906  DKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEV 727
            DKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFEV
Sbjct: 1042 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEV 1101

Query: 726  QVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            QVC  CGLLGY+NHKLKTGICS CKNGD ISTM+LPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1102 QVCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161


>ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana]
            gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
            RPC2 [Arabidopsis thaliana]
          Length = 1161

 Score = 1775 bits (4597), Expect = 0.0
 Identities = 876/1154 (75%), Positives = 1004/1154 (87%), Gaps = 14/1154 (1%)
 Frame = -3

Query: 3966 SSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 3787
            ++ +  IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV AN+ 
Sbjct: 11   TNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSR 70

Query: 3786 ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 3607
            ITS VDP +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH 
Sbjct: 71   ITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHG 130

Query: 3606 KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 3427
             K    K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYF++KGTEKV+LIQ
Sbjct: 131  NKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQ 190

Query: 3426 EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 3247
            EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++K
Sbjct: 191  EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLK 250

Query: 3246 AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 3067
            AMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     
Sbjct: 251  AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPP- 309

Query: 3066 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 2887
            EK+ RA+ ILRD+F+A+VPV   NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRL
Sbjct: 310  EKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL 369

Query: 2886 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERA 2716
            ELSGQLISLLFEDLFKTM SE  KN D  L KP R+SR D +  L +D    I+ GLER 
Sbjct: 370  ELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERT 429

Query: 2715 ISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 2536
            +STGN+D+KRF+MHRKGMTQVL RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGM
Sbjct: 430  LSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGM 489

Query: 2535 LCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFL 2356
            LCPCDTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFL
Sbjct: 490  LCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFL 549

Query: 2355 VIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVI 2176
            VI NGLILGKH RP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASD GRVCRPLVI
Sbjct: 550  VILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVI 609

Query: 2175 ADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGE--------- 2023
            ADKGISR+K+HHMKEL+DGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +         
Sbjct: 610  ADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGA 669

Query: 2022 --AEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDT 1849
              A+ +TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDT
Sbjct: 670  EAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDT 729

Query: 1848 LIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG 1669
            L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFG
Sbjct: 730  LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFG 789

Query: 1668 RCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINK 1489
            RCIVMKK+ A++QKY N T+DRI+ PQR G +AE+MQILDDDGLA+PGEIIRP+DIYINK
Sbjct: 790  RCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINK 849

Query: 1488 QSPINTRDTITSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHT 1309
            Q P++T    TS++S  DS Y+ A + +KGP+GET VVDRVAL SDK   LC K+IIRHT
Sbjct: 850  QVPVDTVTKFTSALS--DSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHT 907

Query: 1308 RRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLG 1129
            RRPE+GDKFSSRHGQKGVCGII+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG
Sbjct: 908  RRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLG 967

Query: 1128 GKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIF 949
             KAGVS GRFHYGSAFGE SGHAD+VE IS TLV+KGFSYSGKD LYSG  G P++AYIF
Sbjct: 968  SKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIF 1027

Query: 948  MGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMM 769
            MGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+
Sbjct: 1028 MGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASML 1087

Query: 768  IFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQEL 589
            I+ERLMISSDPFEVQVCR CGLLGY+N+KLK  +C+TCKNGDNI+TM+LPYACKLLFQEL
Sbjct: 1088 IYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQEL 1147

Query: 588  QSMNVVPRLKLTEA 547
            QSMNVVPRLKLTEA
Sbjct: 1148 QSMNVVPRLKLTEA 1161


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1166

 Score = 1774 bits (4594), Expect = 0.0
 Identities = 887/1157 (76%), Positives = 998/1157 (86%), Gaps = 10/1157 (0%)
 Frame = -3

Query: 3987 TNNQSMGSS-------GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYF 3829
            T NQ  G +       G+   D++ L+AP+KS VDKFQL+PEFLKVRGLVKQHLDSFNYF
Sbjct: 12   TTNQFNGGNKLPGDHCGDSGFDQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYF 71

Query: 3828 VNTGIKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAA 3649
            V T IKKIV ANNLI +   P +YL++ +V IG+PS+  D  T  LTP  CRLSD TYAA
Sbjct: 72   VRTDIKKIVRANNLIMASRYPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAA 131

Query: 3648 PIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGG 3469
            PI   +EYT  SHDK +      + IGRMPIMLRSC CVL+ KDE ELA+LGECPLDPGG
Sbjct: 132  PICADVEYTLRSHDKPDNKRTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGG 191

Query: 3468 YFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQL 3289
            YFV+KGTEKVILIQEQLSKNRIII++DKKG + ASVTSSTE  K+KTVIVM+ EK++LQL
Sbjct: 192  YFVIKGTEKVILIQEQLSKNRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQL 251

Query: 3288 NTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFL 3109
            N F   +P+MV+MKAMGMESDQEV+QMVGRDPRY  LLLPSI+EC    +YT+EQALE+L
Sbjct: 252  NKFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYL 311

Query: 3108 EKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNK 2929
            +K VKR T+S+ S EKE  A   LRDVF+ANVPV Q NF+ KCIYVAVM+RR+M+AILNK
Sbjct: 312  DKLVKRPTYSSNSAEKEGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNK 371

Query: 2928 DAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM 2749
            DAMDDKDYVGNKRLELSGQLISLLFEDLFK+M +E+K  TD  L KP ++   DI   L 
Sbjct: 372  DAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLT 431

Query: 2748 R--DIITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKV 2575
            R   IIT GLER +STGN+++KRF+M RKGMTQVL RLSFI  LGHMT++SPQFEKSRKV
Sbjct: 432  RTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKV 491

Query: 2574 SGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLEL 2395
            SGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDE+E PLISL YSL V  +E 
Sbjct: 492  SGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEH 551

Query: 2394 LSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYI 2215
            L  EELHT +SFLVIFNGLILGKHRRP HFA  +RKLRRAG+IGEFVSV+VNEKQ CVY+
Sbjct: 552  LFAEELHTPDSFLVIFNGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYL 611

Query: 2214 ASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIAL 2035
            ASDGGRVCRPLVIADKGISRIK+HHMKEL DGV TF+DFLR+GLLEYLDVNE+NNALIAL
Sbjct: 612  ASDGGRVCRPLVIADKGISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIAL 671

Query: 2034 YEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRM 1855
            YEG+A  ETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RM
Sbjct: 672  YEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRM 731

Query: 1854 DTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 1675
            D+L+Y+LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRG
Sbjct: 732  DSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRG 791

Query: 1674 FGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYI 1495
            FGRCIVMKK +AI QK++N+TSDRI+RP R    A RMQILDDDG+A+PGEI+RP+DIYI
Sbjct: 792  FGRCIVMKKYNAIIQKHSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYI 851

Query: 1494 NKQSPINTRDTIT-SSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFII 1318
            NKQSPI+TR   T S+ +LPDSAY++  Q++KG  GE  VVDRV L SDKDNN+C KF+I
Sbjct: 852  NKQSPIDTRTPKTGSAANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLI 909

Query: 1317 RHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIE 1138
            RHTRRPE+GDKFSSRHGQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIE
Sbjct: 910  RHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIE 969

Query: 1137 LLGGKAGVSSGRFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQA 958
            LLGGKAGVS GRFHYGSAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG  G PLQA
Sbjct: 970  LLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQA 1029

Query: 957  YIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 778
            YIFMGPIYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGA
Sbjct: 1030 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1089

Query: 777  SMMIFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLF 598
            SM+I+ERLM+SSDPFEVQVC  CGLLGY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ 
Sbjct: 1090 SMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMI 1149

Query: 597  QELQSMNVVPRLKLTEA 547
            QELQSMN+VPRLKL +A
Sbjct: 1150 QELQSMNIVPRLKLADA 1166


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            tuberosum]
          Length = 1151

 Score = 1773 bits (4591), Expect = 0.0
 Identities = 878/1137 (77%), Positives = 995/1137 (87%), Gaps = 3/1137 (0%)
 Frame = -3

Query: 3948 IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV- 3772
            IDKQ+L++P+K+ VDK+QL+PEFLKVRGLVKQHL SFNY V T IKKIV AN+ I S   
Sbjct: 20   IDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKKIVRANHEIRSSTR 79

Query: 3771 DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 3592
            DP +YL+Y+DVRIGEPS+T D     L+P  CRL+D TYAAPI V+++YT   + + +++
Sbjct: 80   DPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMTRNGQISML 139

Query: 3591 TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 3412
            T+ ++VI RMPIMLRSC CVL  KDE++LA+LGECPLDPGGYF+V G EKVILIQEQLSK
Sbjct: 140  TQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQLSK 199

Query: 3411 NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 3232
            NRIII++D+KG + ASV  STE TKSKT+I M+KEK+YL+LN F   +PIMV+MKAMGME
Sbjct: 200  NRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGME 259

Query: 3231 SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKVKRFTFSNASLEKE 3058
            SDQEVVQM+GRDPRY ALLLPSI+ECA   +YTQ QALEFLE  K +   ++ NA +EK 
Sbjct: 260  SDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPVEKG 319

Query: 3057 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 2878
             RA+ ILRD+F+A+VPV Q NFR KCIYVAVM+RR+MEAILNKDAMDDKDYVGNKRLELS
Sbjct: 320  ARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRLELS 379

Query: 2877 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 2698
            GQL+SLLFEDLFKTMN E+++  D +    S+SS L + H    + IT  L+R +STGNW
Sbjct: 380  GQLLSLLFEDLFKTMNDEVRREFDAS----SKSSDL-LYHVKKSNRITVELQRTLSTGNW 434

Query: 2697 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2518
            D+KRF+MHRKGMT+VLARLS+I TLG+MTKI PQFEKSRKVSGPRALQPSQ+GM+CPCDT
Sbjct: 435  DIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICPCDT 494

Query: 2517 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 2338
            PEGEACGLVKNLALMTHVTTDED  P++SLCY LGVEDLE LS  ELHT NS+L+I NGL
Sbjct: 495  PEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLIILNGL 554

Query: 2337 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 2158
            ILGKH+ P+ FA  MRKLRRAG+I EFVS+FVN+KQCCVYIASDGGRVCRPLVIA+KG+S
Sbjct: 555  ILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEKGVS 614

Query: 2157 RIKEHHMKELRDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 1978
            RIKEHHM ELRDGVR FN FLR+GL+EYLDVNE+NN+LIALYE EA P+TTHIEIEPFTI
Sbjct: 615  RIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIEPFTI 674

Query: 1977 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 1798
            LGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+LVYPQRPLLTTRT
Sbjct: 675  LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTRT 734

Query: 1797 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 1618
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +AI QKY N
Sbjct: 735  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYAAICQKYKN 794

Query: 1617 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITSSMSLP 1438
             TSDR+I+PQR G EAE+MQILDDDGLASPGEIIR  DIYINK+SP  T   +TS M LP
Sbjct: 795  LTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESPTVTITQVTSPMGLP 854

Query: 1437 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 1258
            DSAYK++ QTYKG +GE  V+DRVAL SD++NNL  KF+IR TRRPEIGDKFSSRHGQKG
Sbjct: 855  DSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRHGQKG 914

Query: 1257 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHYGSAFG 1078
            VCGIIVQQEDLPFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAGVS GRFHYGSAFG
Sbjct: 915  VCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 974

Query: 1077 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 898
            EPSGHAD V+AISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 975  EPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 1034

Query: 897  HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 718
            HAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I ERLM+SSDPFE QVC
Sbjct: 1035 HARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEAQVC 1094

Query: 717  RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 547
            R CGLLGY+N+KLK GICS CKNG+N+ST++LPYACKLLFQELQSMN+VPRLKLTEA
Sbjct: 1095 RKCGLLGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTEA 1151


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1770 bits (4584), Expect = 0.0
 Identities = 880/1082 (81%), Positives = 962/1082 (88%), Gaps = 24/1082 (2%)
 Frame = -3

Query: 3720 ITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSC 3541
            +T +  +  + PH CRLSD TYAAPI V+IEY  GSH +K  + KN++VIGRMPIMLRSC
Sbjct: 1    MTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSC 60

Query: 3540 RCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASV 3361
             CVL  KDE ELARLGECPLDPGGYFV+KG EKVILIQEQLSKNRIII++DKKG + ASV
Sbjct: 61   CCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASV 120

Query: 3360 TSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGA 3181
            TSS+EATKSKTVI M+KEKIYL LN F   IPIMV+MKAMGMESDQEVVQMVGRDP Y A
Sbjct: 121  TSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNA 180

Query: 3180 LLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQ 3001
            +LLPSI+ECA   IYTQEQALE+LE KVKR  ++  + EKE RA+ ILRDVF+ANVPVR 
Sbjct: 181  VLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRS 240

Query: 3000 LNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEI 2821
             NFRPKC+YVAVMLRRM+EAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKT  SE+
Sbjct: 241  NNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEV 300

Query: 2820 KKNTDLALAKPSRSSRLDIAHYLM-RDIITHGLERAISTGNWDLKRFKMHRKGMTQVLAR 2644
            +K  DL L+KPSRSS LD + +L  R+ IT GLER +STGN+D+KRFKMHRKGMTQVLAR
Sbjct: 301  QKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLAR 360

Query: 2643 LSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 2464
            LSFI TLG+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV
Sbjct: 361  LSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 420

Query: 2463 TTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKL 2284
            TTDEDE PLISLCY LGVEDLELLSGEELHT NSFLVI NGLILGKHRRP+HFA AMRKL
Sbjct: 421  TTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKL 480

Query: 2283 RRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIKEHHMKELRDGVRTFN 2104
            RRAGK+GEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKG+SRIKEHHMKEL DGVRTF+
Sbjct: 481  RRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFD 540

Query: 2103 DFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPR 1924
            DFLR+GL+EYLDVNE+NNALIALYEGEA PETTHIEIEPFTILGVCAGLIP+PHHNQSPR
Sbjct: 541  DFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPR 600

Query: 1923 NTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIELV-------------- 1786
            NTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVYPQRPLLTTRTIELV              
Sbjct: 601  NTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVSGLYVVDYSTPFCP 660

Query: 1785 ---------GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAIN 1633
                     GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA+N
Sbjct: 661  VNCLLCFQVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVN 720

Query: 1632 QKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTITS 1453
            QKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR +  S
Sbjct: 721  QKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVS 780

Query: 1452 SMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSR 1273
            S SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GDKFSSR
Sbjct: 781  SESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSR 840

Query: 1272 HGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGRFHY 1093
            HGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS GRFHY
Sbjct: 841  HGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 900

Query: 1092 GSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHM 913
            GSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHM
Sbjct: 901  GSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 960

Query: 912  VLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPF 733
            VLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPF
Sbjct: 961  VLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 1020

Query: 732  EVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLT 553
            EVQVCR CGLLGY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VPRLKL+
Sbjct: 1021 EVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLS 1080

Query: 552  EA 547
            EA
Sbjct: 1081 EA 1082