BLASTX nr result

ID: Akebia24_contig00000023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00000023
         (534 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345385.1| PREDICTED: zinc finger CCCH domain-containin...    69   9e-10
ref|XP_006345384.1| PREDICTED: zinc finger CCCH domain-containin...    69   9e-10
dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   4e-07
emb|CBI28616.3| unnamed protein product [Vitis vinifera]               57   6e-07
gb|EMT12517.1| Zinc finger CCCH domain-containing protein 22 [Ae...    59   9e-07
ref|XP_004229683.1| PREDICTED: zinc finger CCCH domain-containin...    58   1e-06
ref|XP_004229682.1| PREDICTED: zinc finger CCCH domain-containin...    58   1e-06
ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containin...    55   8e-06

>ref|XP_006345385.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X2 [Solanum tuberosum]
          Length = 736

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           NNN+   S LLPA STLDM PFKSC+FQ+PRF SGHG IGM
Sbjct: 696 NNNMIPSSSLLPATSTLDMTPFKSCYFQVPRFPSGHGTIGM 736


>ref|XP_006345384.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform X1 [Solanum tuberosum]
          Length = 737

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +2

Query: 11  NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           NNN+   S LLPA STLDM PFKSC+FQ+PRF SGHG IGM
Sbjct: 697 NNNMIPSSSLLPATSTLDMTPFKSCYFQVPRFPSGHGTIGM 737


>dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +2

Query: 2   NNNNNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           NN++++L A S+  P  + L++ P+KSCFFQ+PRFS GHGAIG+
Sbjct: 555 NNSSSHLVASSLFPPTPTALELPPYKSCFFQVPRFSPGHGAIGL 598


>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 57.4 bits (137), Expect(2) = 6e-07
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = +2

Query: 11  NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHG 121
           N NL   S LLPA STLDMA FKSC+FQ+PRFSSGHG
Sbjct: 582 NGNLITSS-LLPATSTLDMASFKSCYFQMPRFSSGHG 617



 Score = 21.6 bits (44), Expect(2) = 6e-07
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 240 TTIFKIVHVIINTILLNTNAYIQRH 314
           TT      +IINTILL T   IQ H
Sbjct: 650 TTTTTTTAIIINTILLTT---IQMH 671


>gb|EMT12517.1| Zinc finger CCCH domain-containing protein 22 [Aegilops tauschii]
          Length = 595

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +2

Query: 2   NNNNNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           NN++ +L A S+  P  + L++ P+KSCFFQ+PRFS GHGAIG+
Sbjct: 552 NNSSPHLVASSLFPPTPTALELPPYKSCFFQVPRFSPGHGAIGL 595


>ref|XP_004229683.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform 2 [Solanum lycopersicum]
          Length = 731

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +2

Query: 11  NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           NNN+   S L  + STLDM PFKSC+FQ+PRF SGHG IGM
Sbjct: 693 NNNMIPSSSL--STSTLDMTPFKSCYFQVPRFPSGHGTIGM 731


>ref|XP_004229682.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           isoform 1 [Solanum lycopersicum]
          Length = 732

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +2

Query: 11  NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           NNN+   S L  + STLDM PFKSC+FQ+PRF SGHG IGM
Sbjct: 694 NNNMIPSSSL--STSTLDMTPFKSCYFQVPRFPSGHGTIGM 732


>ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Brachypodium distachyon]
          Length = 612

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +2

Query: 2   NNNNNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133
           +N + +L A S L P  S L++ P+KSCFFQ+PRFS GHGAIG+
Sbjct: 570 HNGSPHLVASS-LFPPTSALELPPYKSCFFQVPRFSPGHGAIGL 612


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