BLASTX nr result
ID: Akebia24_contig00000023
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00000023 (534 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006345385.1| PREDICTED: zinc finger CCCH domain-containin... 69 9e-10 ref|XP_006345384.1| PREDICTED: zinc finger CCCH domain-containin... 69 9e-10 dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 4e-07 emb|CBI28616.3| unnamed protein product [Vitis vinifera] 57 6e-07 gb|EMT12517.1| Zinc finger CCCH domain-containing protein 22 [Ae... 59 9e-07 ref|XP_004229683.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-06 ref|XP_004229682.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-06 ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containin... 55 8e-06 >ref|XP_006345385.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X2 [Solanum tuberosum] Length = 736 Score = 68.6 bits (166), Expect = 9e-10 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = +2 Query: 11 NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 NNN+ S LLPA STLDM PFKSC+FQ+PRF SGHG IGM Sbjct: 696 NNNMIPSSSLLPATSTLDMTPFKSCYFQVPRFPSGHGTIGM 736 >ref|XP_006345384.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform X1 [Solanum tuberosum] Length = 737 Score = 68.6 bits (166), Expect = 9e-10 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = +2 Query: 11 NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 NNN+ S LLPA STLDM PFKSC+FQ+PRF SGHG IGM Sbjct: 697 NNNMIPSSSLLPATSTLDMTPFKSCYFQVPRFPSGHGTIGM 737 >dbj|BAK05701.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 598 Score = 59.7 bits (143), Expect = 4e-07 Identities = 24/44 (54%), Positives = 35/44 (79%) Frame = +2 Query: 2 NNNNNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 NN++++L A S+ P + L++ P+KSCFFQ+PRFS GHGAIG+ Sbjct: 555 NNSSSHLVASSLFPPTPTALELPPYKSCFFQVPRFSPGHGAIGL 598 >emb|CBI28616.3| unnamed protein product [Vitis vinifera] Length = 672 Score = 57.4 bits (137), Expect(2) = 6e-07 Identities = 28/37 (75%), Positives = 30/37 (81%) Frame = +2 Query: 11 NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHG 121 N NL S LLPA STLDMA FKSC+FQ+PRFSSGHG Sbjct: 582 NGNLITSS-LLPATSTLDMASFKSCYFQMPRFSSGHG 617 Score = 21.6 bits (44), Expect(2) = 6e-07 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +3 Query: 240 TTIFKIVHVIINTILLNTNAYIQRH 314 TT +IINTILL T IQ H Sbjct: 650 TTTTTTTAIIINTILLTT---IQMH 671 >gb|EMT12517.1| Zinc finger CCCH domain-containing protein 22 [Aegilops tauschii] Length = 595 Score = 58.5 bits (140), Expect = 9e-07 Identities = 24/44 (54%), Positives = 34/44 (77%) Frame = +2 Query: 2 NNNNNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 NN++ +L A S+ P + L++ P+KSCFFQ+PRFS GHGAIG+ Sbjct: 552 NNSSPHLVASSLFPPTPTALELPPYKSCFFQVPRFSPGHGAIGL 595 >ref|XP_004229683.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform 2 [Solanum lycopersicum] Length = 731 Score = 58.2 bits (139), Expect = 1e-06 Identities = 27/41 (65%), Positives = 31/41 (75%) Frame = +2 Query: 11 NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 NNN+ S L + STLDM PFKSC+FQ+PRF SGHG IGM Sbjct: 693 NNNMIPSSSL--STSTLDMTPFKSCYFQVPRFPSGHGTIGM 731 >ref|XP_004229682.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like isoform 1 [Solanum lycopersicum] Length = 732 Score = 58.2 bits (139), Expect = 1e-06 Identities = 27/41 (65%), Positives = 31/41 (75%) Frame = +2 Query: 11 NNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 NNN+ S L + STLDM PFKSC+FQ+PRF SGHG IGM Sbjct: 694 NNNMIPSSSL--STSTLDMTPFKSCYFQVPRFPSGHGTIGM 732 >ref|XP_003579005.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like [Brachypodium distachyon] Length = 612 Score = 55.5 bits (132), Expect = 8e-06 Identities = 25/44 (56%), Positives = 33/44 (75%) Frame = +2 Query: 2 NNNNNNLTAPSVLLPANSTLDMAPFKSCFFQIPRFSSGHGAIGM 133 +N + +L A S L P S L++ P+KSCFFQ+PRFS GHGAIG+ Sbjct: 570 HNGSPHLVASS-LFPPTSALELPPYKSCFFQVPRFSPGHGAIGL 612