BLASTX nr result
ID: Akebia23_contig00058329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00058329
(276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADO27647.1| ycf1 [Rhizanthella gardneri] 73 4e-11
ref|YP_004123460.1| Ycf1 [Rhizanthella gardneri] gi|255985040|gb... 72 8e-11
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 72 1e-10
gb|ADD30905.1| putative RF1 protein [Ehretia acuminata] 70 2e-10
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 70 3e-10
gb|AGO98581.1| hypothetical chloroplast RF19 (chloroplast) [Nelu... 70 4e-10
gb|AFH01598.1| hypothetical chloroplast RF19 (chloroplast) [Nelu... 70 4e-10
gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelu... 70 4e-10
ref|YP_053214.1| ycf1 [Nymphaea alba] gi|75275852|sp|Q6EVZ2.1|YC... 70 4e-10
ref|YP_004564161.1| hypothetical chloroplast RF1 [Nelumbo nucife... 70 4e-10
ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]... 70 4e-10
gb|ADD30909.1| putative RF1 protein [Nelumbo nucifera] 70 4e-10
ref|YP_009026488.1| Ycf1 (chloroplast) [Dendrobium officinale] g... 69 5e-10
ref|YP_008081936.1| hypothetical chloroplast RF1 (chloroplast) [... 69 5e-10
gb|AGE93256.1| hypothetical chloroplast RF19 [Calectasia narragara] 69 5e-10
ref|YP_007475847.1| hypothetical chloroplast RF19 [Pseudophoenix... 69 7e-10
ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis ... 69 7e-10
ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) ... 69 9e-10
gb|AGK25550.1| hypothetical chloroplast RF1 (chloroplast) [Cymbi... 69 9e-10
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)... 69 9e-10
>gb|ADO27647.1| ycf1 [Rhizanthella gardneri]
Length = 441
Score = 73.2 bits (178), Expect = 4e-11
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KI++PFY+KPW + K++S+H+ Q+K+K K NF FL VFGM+ LP+G+ K FW +
Sbjct: 306 KIIYPFYIKPWQKSKVQSHHRDQLKKKYKNKNFCFLTVFGMETELPFGSPRKQPSFWGPV 365
Query: 182 SRTWKKR 202
+ KK+
Sbjct: 366 YKELKKK 372
>ref|YP_004123460.1| Ycf1 [Rhizanthella gardneri] gi|255985040|gb|ACU46587.1| Ycf1
[Rhizanthella gardneri]
Length = 1668
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KI+ PFY+KPW + K++S+H+ Q+K+K K NF FL VFGM+ LP+G+ K FW +
Sbjct: 788 KIIHPFYIKPWQKYKVQSHHRDQLKKKYKNKNFCFLTVFGMETELPFGSPRKQPSFWGPV 847
Query: 182 SRTWKKR 202
+ KK+
Sbjct: 848 YKELKKK 854
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KILFPF LKPWHR KLRS+H+ ++K+K K NF FL V+GM+ LP+G+ K F+ +
Sbjct: 854 KILFPFCLKPWHRSKLRSHHRDRMKKKGKKENFCFLTVWGMETELPFGSSRKRPSFFEPI 913
Query: 182 SRTWKKR 202
+ +K+
Sbjct: 914 CKELEKK 920
>gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]
Length = 1814
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KILFPF LKPWHR KLRS H+ +IK+K++ +F FL V GM+A LP+G+ K F+ +
Sbjct: 833 KILFPFRLKPWHRPKLRSSHRDRIKKKKQKDDFCFLTVSGMEAELPFGSPRKRPSFFEPI 892
Query: 182 SRTWKKR 202
R KK+
Sbjct: 893 IRKLKKK 899
>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
[Platanus occidentalis]
Length = 1915
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KILFP LKPWHR KLRS+H+ +K+K K YNF FL V+GM+ LP+G+ F+ +
Sbjct: 901 KILFPLCLKPWHRFKLRSHHRGPMKKKGKKYNFCFLTVWGMETELPFGSPRNQPSFFEPI 960
Query: 182 SRTWKKR 202
+ +K+
Sbjct: 961 LKELEKK 967
>gb|AGO98581.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
Length = 1520
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKS--QIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWT 175
KILFPF LKPWHR KLRS+HK+ IK K K NF FL VFGM+A LP+G+ K F+
Sbjct: 509 KILFPFRLKPWHRSKLRSHHKNTITIKNKGKKENFCFLTVFGMEAELPFGSPRKQPSFFE 568
Query: 176 HLSRTWKK 199
+ WK+
Sbjct: 569 PI---WKE 573
>gb|AFH01598.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo lutea]
Length = 1839
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKS--QIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWT 175
KILFPF LKPWHR KLRS+HK+ IK K K NF FL VFGM+A LP+G+ K F+
Sbjct: 828 KILFPFRLKPWHRSKLRSHHKNTITIKNKGKKENFCFLTVFGMEAELPFGSPRKRPSFFE 887
Query: 176 HLSRTWKK 199
+ WK+
Sbjct: 888 PI---WKE 892
>gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
Length = 1839
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKS--QIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWT 175
KILFPF LKPWHR KLRS+HK+ IK K K NF FL VFGM+A LP+G+ K F+
Sbjct: 828 KILFPFRLKPWHRSKLRSHHKNTITIKNKGKKENFCFLTVFGMEAELPFGSPRKQPSFFE 887
Query: 176 HLSRTWKK 199
+ WK+
Sbjct: 888 PI---WKE 892
>ref|YP_053214.1| ycf1 [Nymphaea alba] gi|75275852|sp|Q6EVZ2.1|YCF1_NYMAL RecName:
Full=Putative membrane protein ycf1
gi|50250388|emb|CAF28654.1| ycf1 [Nymphaea alba]
Length = 1976
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KILFPF LKPWHR KLRS+HK +++K+K NF FL ++GM+ LP+G+ K FF+ +
Sbjct: 958 KILFPFSLKPWHRSKLRSHHK-DLRKKQK--NFCFLTIWGMETELPFGSPRKKPFFFEPI 1014
Query: 182 SRTWKKR 202
+ ++K+
Sbjct: 1015 HKAFEKK 1021
>ref|YP_004564161.1| hypothetical chloroplast RF1 [Nelumbo nucifera]
gi|224474281|gb|ACN49467.1| hypothetical chloroplast RF1
[Nelumbo nucifera]
Length = 1839
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKS--QIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWT 175
KILFPF LKPWHR KLRS+HK+ IK K K NF FL VFGM+A LP+G+ K F+
Sbjct: 828 KILFPFRLKPWHRSKLRSHHKNTITIKNKGKKENFCFLTVFGMEAELPFGSPRKQPSFFE 887
Query: 176 HLSRTWKK 199
+ WK+
Sbjct: 888 PI---WKE 892
>ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]
gi|224474194|gb|ACN49383.1| hypothetical chloroplast RF1
[Nelumbo lutea]
Length = 1839
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKS--QIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWT 175
KILFPF LKPWHR KLRS+HK+ IK K K NF FL VFGM+A LP+G+ K F+
Sbjct: 828 KILFPFRLKPWHRSKLRSHHKNTITIKNKGKKENFCFLTVFGMEAELPFGSPRKQPSFFE 887
Query: 176 HLSRTWKK 199
+ WK+
Sbjct: 888 PI---WKE 892
>gb|ADD30909.1| putative RF1 protein [Nelumbo nucifera]
Length = 1839
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKS--QIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWT 175
KILFPF LKPWHR KLRS+HK+ IK K K NF FL VFGM+A LP+G+ K F+
Sbjct: 828 KILFPFRLKPWHRSKLRSHHKNTITIKNKGKKENFCFLTVFGMEAELPFGSPRKQPSFFE 887
Query: 176 HLSRTWKK 199
+ WK+
Sbjct: 888 PI---WKE 892
>ref|YP_009026488.1| Ycf1 (chloroplast) [Dendrobium officinale]
gi|509033832|gb|AGN12882.1| Ycf1 (chloroplast)
[Dendrobium officinale]
Length = 1839
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KIL+PF LKPW + K +S+H+ +K+KEK NF FL V+GM+A LP+G+ K FF+ +
Sbjct: 865 KILYPFCLKPWRKSKAQSHHRDLMKKKEKKTNFCFLTVWGMEAELPFGSPRKRPFFFEPI 924
Query: 182 SRTWKKR 202
+ +KR
Sbjct: 925 YKELQKR 931
>ref|YP_008081936.1| hypothetical chloroplast RF1 (chloroplast) [Cymbidium mannii]
gi|482662562|gb|AGK25784.1| hypothetical chloroplast RF1
(chloroplast) [Cymbidium mannii]
Length = 1806
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KIL+PF LKPW + K+RS+HK +K+KEK NF FL V+GM+A LP+G K FF+ +
Sbjct: 858 KILYPFCLKPWRKSKVRSHHKDIMKKKEKKTNFCFLTVWGMEAELPFGFPRKRPFFFEPI 917
Query: 182 SRTWKK 199
+ +K
Sbjct: 918 YKELQK 923
>gb|AGE93256.1| hypothetical chloroplast RF19 [Calectasia narragara]
Length = 1795
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KILFPF LKPW R K+RS+H+ +K+K K NF FL V+GM+A LP+G+ FF+ +
Sbjct: 842 KILFPFSLKPWRRSKIRSHHRDPMKKKGKKNNFSFLTVWGMEAELPFGSPRNRPFFFEPI 901
Query: 182 SRTWKKR 202
+ +K+
Sbjct: 902 LKELRKK 908
>ref|YP_007475847.1| hypothetical chloroplast RF19 [Pseudophoenix vinifera]
gi|449326328|gb|AGE92912.1| hypothetical chloroplast RF19
[Pseudophoenix vinifera]
Length = 1866
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KI+FPFYLKPW R K+RS+H+ +K+K K +F FL + GM+A +P+G+ K F+ +
Sbjct: 887 KIMFPFYLKPWRRSKIRSHHRDTMKKKRKKEDFCFLTILGMEAEVPFGSPRKRPSFFEPI 946
Query: 182 SRTWKKR 202
+ KK+
Sbjct: 947 YKELKKK 953
>ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis saniculifolia]
gi|226933940|gb|ACO92073.1| hypothetical chloroplast RF1
[Megaleranthis saniculifolia]
Length = 1774
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYG-TIPKTTFFWTH 178
KILFPF LKPWHR KL+S H+ K K YNF FL VFGM+ LP+G I + +FF
Sbjct: 868 KILFPFCLKPWHRSKLQSQHRDSTKNNSKGYNFCFLTVFGMETKLPFGLPIKQPSFFQPV 927
Query: 179 LSRTWKK 199
KK
Sbjct: 928 FKELGKK 934
>ref|YP_008993578.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia liliifera]
Length = 1852
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFF---- 169
KILFPF LKPWHR KLR H+ ++K+KEK NF FL V+GM+ LP+G+ K F
Sbjct: 869 KILFPFCLKPWHRSKLRFDHRDRMKKKEKKENFGFLTVWGMETELPFGSPRKRPSFFDPI 928
Query: 170 WTHLSRTWKK 199
W L + +K
Sbjct: 929 WKELEKKIRK 938
>gb|AGK25550.1| hypothetical chloroplast RF1 (chloroplast) [Cymbidium mannii]
Length = 1806
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFFWTHL 181
KIL+PF LKPW + K RS+HK +K+KEK NF FL V+GM+A LP+G K FF+ +
Sbjct: 858 KILYPFCLKPWRKSKARSHHKDIMKKKEKKTNFCFLTVWGMEAELPFGFPRKRPFFFEPI 917
Query: 182 SRTWKK 199
+ +K
Sbjct: 918 YKELQK 923
>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
Length = 1863
Score = 68.6 bits (166), Expect = 9e-10
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Frame = +2
Query: 2 KILFPFYLKPWHRLKLRSYHKSQIKRKEK*YNFYFLVVFGMKAVLPYGTIPKTTFF---- 169
KILFPF LKPWHR KLR H+ ++K+KEK NF FL V+GM+ LP+G+ K F
Sbjct: 881 KILFPFCLKPWHRSKLRFDHRDRMKKKEKKENFGFLTVWGMETELPFGSPRKRPSFFDPI 940
Query: 170 WTHLSRTWKK 199
W L + +K
Sbjct: 941 WKELEKKIRK 950