BLASTX nr result
ID: Akebia23_contig00056690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00056690
(395 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 52 3e-06
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 52 3e-06
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 52 3e-06
gb|EMT16132.1| hypothetical protein F775_03544 [Aegilops tauschii] 54 5e-06
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 52 5e-06
gb|ABN08556.1| Polyprotein, putative [Medicago truncatula] 56 6e-06
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Triticum urartu]
Length = 1028
Score = 52.4 bits (124), Expect(3) = 3e-06
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Frame = +2
Query: 23 RCASGILCNKFTPIKLKEQFYKLEKGHLCFYRAEFWAVK-------------IILIKCG- 160
R ASGILC+K P KLK +FY+ Y AE W K ++ CG
Sbjct: 609 RQASGILCDKRVPQKLKGKFYRTAVRPAMLYGAECWPTKRRHVQQLGVAEMRMLRWMCGH 668
Query: 161 -KEDGNS*DK*VDRLGKQN*KQTHLRNIVVAPIGDKLVETRPRWFGKIRKR 310
++D D DR+G VAPI +KLV+ R RWFG I++R
Sbjct: 669 TRKDRVRNDDIRDRVG-------------VAPIEEKLVQHRLRWFGHIQRR 706
Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 352 LKRVRGKPKITW 387
+KR RG+P +TW
Sbjct: 723 VKRGRGRPNLTW 734
Score = 20.8 bits (42), Expect(3) = 3e-06
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 6 GWLKWRGA 29
GW+KWR A
Sbjct: 604 GWMKWRQA 611
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 52.4 bits (124), Expect(3) = 3e-06
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Frame = +2
Query: 23 RCASGILCNKFTPIKLKEQFYKLEKGHLCFYRAEFWAVK-------------IILIKCG- 160
R ASGILC+K P KLK +FY+ Y AE W K ++ CG
Sbjct: 409 RQASGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGH 468
Query: 161 -KEDGNS*DK*VDRLGKQN*KQTHLRNIVVAPIGDKLVETRPRWFGKIRKR 310
+ D D DR+G VAPI +KLV+ R RWFG I++R
Sbjct: 469 TRRDRVRNDDIRDRVG-------------VAPIAEKLVQHRLRWFGHIQRR 506
Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 352 LKRVRGKPKITW 387
+KR RG+P +TW
Sbjct: 523 VKRGRGRPNLTW 534
Score = 20.8 bits (42), Expect(3) = 3e-06
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 6 GWLKWRGA 29
GW+KWR A
Sbjct: 404 GWMKWRQA 411
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 52.4 bits (124), Expect(3) = 3e-06
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Frame = +2
Query: 23 RCASGILCNKFTPIKLKEQFYKLEKGHLCFYRAEFWAVK-------------IILIKCG- 160
R ASGILC+K P KLK +FY+ Y AE W K ++ CG
Sbjct: 149 RQASGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGH 208
Query: 161 -KEDGNS*DK*VDRLGKQN*KQTHLRNIVVAPIGDKLVETRPRWFGKIRKR 310
+ D D DR+G VAPI +KLV+ R RWFG I++R
Sbjct: 209 TRRDHVRNDDIRDRVG-------------VAPIAEKLVQHRLRWFGHIQRR 246
Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 352 LKRVRGKPKITW 387
+KR RG+P +TW
Sbjct: 263 VKRGRGRPNLTW 274
Score = 20.8 bits (42), Expect(3) = 3e-06
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 6 GWLKWRGA 29
GW+KWR A
Sbjct: 144 GWMKWRQA 151
>gb|EMT16132.1| hypothetical protein F775_03544 [Aegilops tauschii]
Length = 1062
Score = 53.5 bits (127), Expect(2) = 5e-06
Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Frame = +2
Query: 23 RCASGILCNKFTPIKLKEQFYKLEKGHLCFYRAEFWAVK-------------IILIKCG- 160
R ASGILC+K P KLK +FY++ Y AE W K I+ CG
Sbjct: 212 RQASGILCDKRVPQKLKGKFYRMAVPPAMLYVAECWPTKRRHVQQLGVAEMCILRWMCGH 271
Query: 161 -KEDGNS*DK*VDRLGKQN*KQTHLRNIVVAPIGDKLVETRPRWFGKIRKR 310
++D D DR+G VAPI +KLV+ R RWFG I++R
Sbjct: 272 TRKDRVWDDDIRDRVG-------------VAPIEEKLVQYRLRWFGHIQRR 309
Score = 22.3 bits (46), Expect(2) = 5e-06
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 352 LKRVRGKPKITW 387
+KR RG+P +TW
Sbjct: 326 VKRGRGRPNLTW 337
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 51.6 bits (122), Expect(3) = 5e-06
Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Frame = +2
Query: 23 RCASGILCNKFTPIKLKEQFYKLEKGHLCFYRAEFWAVK-------------IILIKCG- 160
R ASGILC+K P KLK +FY+ Y AE W K ++ CG
Sbjct: 357 RQASGILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQQLDVAEMCMLRCMCGH 416
Query: 161 -KEDGNS*DK*VDRLGKQN*KQTHLRNIVVAPIGDKLVETRPRWFGKIRKR 310
++D D DR+G VAPI +KLV+ R RWFG I+ R
Sbjct: 417 TRKDRVRNDDIRDRVG-------------VAPIEEKLVQHRLRWFGHIQHR 454
Score = 22.3 bits (46), Expect(3) = 5e-06
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 352 LKRVRGKPKITW 387
+KR RG+P +TW
Sbjct: 471 VKRGRGRPNLTW 482
Score = 20.8 bits (42), Expect(3) = 5e-06
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 6 GWLKWRGA 29
GW+KWR A
Sbjct: 352 GWMKWRQA 359
>gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]
Length = 137
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +2
Query: 2 NWMVKVERCASGILCNKFTPIKLKEQFYKLEKGHLCFYRAEFWAVK------IILIKCGK 163
NW R ASG+LC+K P+KLK +FY+ Y E WAVK + +++
Sbjct: 36 NW-----RRASGVLCDKKVPLKLKGKFYRTAVRPALLYGTECWAVKSQHENQVSVVEMRM 90
Query: 164 EDGNS*DK*VDRLGKQN*KQTHLRNIVVAPIGDKLVETRPRWFGKIRKR 310
S DR+ T + VAPI +KLVE R RWFG + +R
Sbjct: 91 LRWMSGKTRHDRIR----NDTIRERVGVAPIVEKLVENRLRWFGHVERR 135